BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003432
(820 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224131084|ref|XP_002320997.1| predicted protein [Populus trichocarpa]
gi|222861770|gb|EEE99312.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/822 (81%), Positives = 725/822 (88%), Gaps = 20/822 (2%)
Query: 1 MASAASMSVSVECVNICKL-PKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPA-HSS 58
MASA+S+SV VEC+NICKL KGDGSGRY +CSVLSCAWKAPR LTGFLAST HP+ S
Sbjct: 1 MASASSLSVPVECLNICKLLSKGDGSGRY-ECSVLSCAWKAPRVLTGFLASTAHPSPQCS 59
Query: 59 SLSLGPTGRRNRINSRCEAFDVGS-WCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSV 117
S G GRR + SRC+AFD G + +E SD LLG+ +S L HVA K+W+L S S+
Sbjct: 60 SFLCGRNGRRKQFKSRCKAFDTGGCYSSEDSDFALLGRFFKSRLHHVAGKKWQLSSSSSI 119
Query: 118 SSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVE 177
S+D F E SPERLWEDL+PT+SYLSP ELELV +AL LAFEAHDGQKRRSGEPFIIHPVE
Sbjct: 120 SADTFNEVSPERLWEDLKPTVSYLSPKELELVHKALKLAFEAHDGQKRRSGEPFIIHPVE 179
Query: 178 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLK 237
VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG VR IVEGETKVSKLGKLK
Sbjct: 180 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGPIVRHIVEGETKVSKLGKLK 239
Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
CKNEN SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMP HKQSSIA ETL
Sbjct: 240 CKNENESVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPLHKQSSIAMETL 299
Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL KK
Sbjct: 300 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILKKK 359
Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP 417
IE+DQFLDL+TVKT++R+VCKEPYSIY+AVLKS+GSINEVNQIAQLRIII+PKPC G GP
Sbjct: 360 IEEDQFLDLLTVKTDVRAVCKEPYSIYRAVLKSKGSINEVNQIAQLRIIIQPKPCIGAGP 419
Query: 418 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQI 477
LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQI
Sbjct: 420 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQI 479
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RTEEMDLIAERGIAAHYSGRVFVTGLVGHA PNGRS RGK VCLNNANIALRI WLNAIR
Sbjct: 480 RTEEMDLIAERGIAAHYSGRVFVTGLVGHAMPNGRSTRGKAVCLNNANIALRIGWLNAIR 539
Query: 538 EWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGE-----------IKNLPKGATVVDY 586
EWQEEFVGNM+SREFV+TITRDLLGS VFVFTPRGE IKNLPKGAT +DY
Sbjct: 540 EWQEEFVGNMSSREFVETITRDLLGSCVFVFTPRGEFWILIFDDMVQIKNLPKGATAIDY 599
Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKT 646
AYMIHTEIGNKMVAAKVNGNLVSP HVLANAEVVEIITYNALSSKSAFQRHKQWL+HAKT
Sbjct: 600 AYMIHTEIGNKMVAAKVNGNLVSPMHVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKT 659
Query: 647 RSARHKIMKFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMN 706
RSARHKIMKFLREQAALSA+EITAD+V DF+ADS ESEVED+SD +K+ +PLWEKILMN
Sbjct: 660 RSARHKIMKFLREQAALSAAEITADSVNDFIADSEGESEVEDISDNNKRSRPLWEKILMN 719
Query: 707 VVQMSSPVRNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHAN 766
VV+ SS + S + ++W PKVNGKHNK V + +G+L SQ N AKM+ A+
Sbjct: 720 VVEKSSQGKCSNDFLPVNYGTVWTPKVNGKHNKHV-----QTKGDLLSQGNGVAKMIQAS 774
Query: 767 VPMYKEVLPGLESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
+P YKEVLPGLESWQASK+A+WH+LEGHSIQWF VVCIDRRG
Sbjct: 775 IPRYKEVLPGLESWQASKVASWHSLEGHSIQWFCVVCIDRRG 816
>gi|255564246|ref|XP_002523120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223537682|gb|EEF39305.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 887
Score = 1321 bits (3418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/809 (79%), Positives = 698/809 (86%), Gaps = 7/809 (0%)
Query: 12 ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
ECVNICKLPKGD YDC+VLSCAWKAPR LTGFLAST HP SSLS RRN
Sbjct: 19 ECVNICKLPKGD----RYDCNVLSCAWKAPRVLTGFLASTAHPHQCSSLSSARNCRRNHF 74
Query: 72 NSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
S+C F++ S + E + KL R+ LL+VA +RW+L S +S + E SP+RL
Sbjct: 75 KSKCGTFEIASSNSIEAFGSAFVEKLFRTRLLNVAGQRWQLYCSSPISMGTWNEVSPKRL 134
Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
WEDL+P +SYLSP ELELV AL LAFEAHDGQKRRSGEPFI+HPVEVARILGELELDWE
Sbjct: 135 WEDLKPAVSYLSPKELELVHSALELAFEAHDGQKRRSGEPFIVHPVEVARILGELELDWE 194
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGLLHDTVEDTNVVTFERIEEEFG TVR IVEGETKVSKLGKLKCKNE+ S QDVKA
Sbjct: 195 SIAAGLLHDTVEDTNVVTFERIEEEFGPTVRHIVEGETKVSKLGKLKCKNESDSAQDVKA 254
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS+MPPHKQSSIA ETLQVFAPLAKLLGMY
Sbjct: 255 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSYMPPHKQSSIAMETLQVFAPLAKLLGMY 314
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
QIKSELENLSFMYT EDYAK+KRRVADLYKEHEKEL EANKIL KKIE+DQFLDLMTVK
Sbjct: 315 QIKSELENLSFMYTKPEDYAKIKRRVADLYKEHEKELLEANKILEKKIEEDQFLDLMTVK 374
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
TE+RS CKEPYSIYKAVLKS+ SI EVNQIAQLRII+KPKPC GVGP C+PQQICYHVLG
Sbjct: 375 TEVRSACKEPYSIYKAVLKSKSSICEVNQIAQLRIIVKPKPCVGVGPFCTPQQICYHVLG 434
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
LVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQ+RTEEMDLIAERGI
Sbjct: 435 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQVRTEEMDLIAERGI 494
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAHYSG+VFVTGLVG A PNGRS RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 495 AAHYSGKVFVTGLVGRAVPNGRSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 554
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFVDTITRDLLGSRVFVFTPRGEIKNLPKGAT +DYAYMIHT+IGNKMVAAKVNGNLVSP
Sbjct: 555 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATAIDYAYMIHTDIGNKMVAAKVNGNLVSP 614
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITA 670
HVLANAEVVEIITYNALSSKSAFQRHKQWL+HAKTRSARHKIMKFLREQAALSA+EITA
Sbjct: 615 MHVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAALSAAEITA 674
Query: 671 DTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDNASLWA 730
D V DF +S E+SEVE+ D + ++PLWEKI +NV + SS + SK + N S+W
Sbjct: 675 DAVNDF--NSEEDSEVEEFLDNTASNRPLWEKIFVNVAEKSSQGKYSKDLLPSKNGSVWV 732
Query: 731 PKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKIATWHN 790
PKVNGKHNK + +V A+G+L SQ N AKM+ +NVPM+KEVLPGLE W ASK+A+WH+
Sbjct: 733 PKVNGKHNKHMQHVSLDAQGKLLSQGNGVAKMIQSNVPMFKEVLPGLEGWHASKVASWHS 792
Query: 791 LEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
+EGHSIQWFSVVCIDRRG V + +
Sbjct: 793 VEGHSIQWFSVVCIDRRGMMAEVTTALAT 821
>gi|297743917|emb|CBI36887.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/820 (80%), Positives = 706/820 (86%), Gaps = 4/820 (0%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
MASA SMSVSVECVNICK KGDGS R+ DCSVLSCAWKAPR L+GFLAST H S
Sbjct: 1 MASAPSMSVSVECVNICKFSKGDGSVRH-DCSVLSCAWKAPRVLSGFLASTAHSPQCSLS 59
Query: 61 SLGPTGRRNRINSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
S +G RNRI R EA DVG W + E SD VL +L RS+L HVA +RW+ S S SS
Sbjct: 60 SCAGSGGRNRIKYRYEAHDVGGWHSHEASDFVLPERLIRSNLFHVASRRWKSSCSSSFSS 119
Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
AF + SPE LWEDL+P ISYL P ELELV AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 120 VAFDKVSPESLWEDLKPAISYLPPQELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 179
Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
RILGELELDWESIAAGLLHDTVEDTNVVTF+ +E EFGATVR IVEGETKVSKLGKLK K
Sbjct: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFDSLEREFGATVRHIVEGETKVSKLGKLKRK 239
Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
NEN SVQDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTLSHMPPHKQ SIATETLQV
Sbjct: 240 NENDSVQDVKADDLRQMFLAMTQEVRVIIVKLADRLHNMRTLSHMPPHKQVSIATETLQV 299
Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
FAPLAKLLGMYQIKSELENLSFMYTNA+DYA VKRRVADLYKEHEKEL EANKILM+KIE
Sbjct: 300 FAPLAKLLGMYQIKSELENLSFMYTNAQDYAMVKRRVADLYKEHEKELVEANKILMEKIE 359
Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
DDQFLDLMTVKT++R+VCKEPYSIYKAV KSRGSINEVNQIAQLRIIIKPKPC+GVGPLC
Sbjct: 360 DDQFLDLMTVKTDVRAVCKEPYSIYKAVHKSRGSINEVNQIAQLRIIIKPKPCTGVGPLC 419
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
S QQICYHVLGLVHGIWTP+PRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 420 SAQQICYHVLGLVHGIWTPVPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 479
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEMD+IAERGIAAHYSGRVFV GL+G A G S RGKT CLNNANIALRISWLNAIREW
Sbjct: 480 EEMDVIAERGIAAHYSGRVFVGGLIGRATSGG-SSRGKTGCLNNANIALRISWLNAIREW 538
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
QEEFVGNMTSREFVDT+T+DLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTEIGNKMV
Sbjct: 539 QEEFVGNMTSREFVDTVTKDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEIGNKMV 598
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AAKVNGNLVSP HVLANAEVVEIITYNALSSKSAFQRHKQWL+HAKTRSARHKIMKFLRE
Sbjct: 599 AAKVNGNLVSPMHVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLRE 658
Query: 660 QAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKA 719
QAALSA+EITADTV DF+A+S ES +E+ S SK K +WE+ LMN V+MSS +++ K
Sbjct: 659 QAALSAAEITADTVNDFIANSEVESNLEEASRHSKGGKSVWERFLMNFVEMSSSMKSPKD 718
Query: 720 VCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLES 779
V N S PKVNGKHN++V V ++E L +Q N AKM H N+P KEVLPGLES
Sbjct: 719 VFHPQNGSTQVPKVNGKHNRQVQNVNLESEKPL-TQGNGVAKMKHLNIPTCKEVLPGLES 777
Query: 780 WQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
W+ +K+A+WH+ EGHSIQW VVCIDRRG V + S
Sbjct: 778 WKTNKVASWHSHEGHSIQWLCVVCIDRRGMMAEVTAALAS 817
>gi|225437434|ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
Length = 887
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/824 (79%), Positives = 706/824 (85%), Gaps = 8/824 (0%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
MASA SMSVSVECVNICK KGDGS R+ DCSVLSCAWKAPR L+GFLAST H S
Sbjct: 1 MASAPSMSVSVECVNICKFSKGDGSVRH-DCSVLSCAWKAPRVLSGFLASTAHSPQCSLS 59
Query: 61 SLGPTGRRNRIN----SRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSP 115
S +G RNRI R EA DVG W + E SD VL +L RS+L HVA +RW+ S
Sbjct: 60 SCAGSGGRNRIKYVSWQRYEAHDVGGWHSHEASDFVLPERLIRSNLFHVASRRWKSSCSS 119
Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
S SS AF + SPE LWEDL+P ISYL P ELELV AL LAFEAHDGQKRRSGEPFIIHP
Sbjct: 120 SFSSVAFDKVSPESLWEDLKPAISYLPPQELELVHNALKLAFEAHDGQKRRSGEPFIIHP 179
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VEVARILGELELDWESIAAGLLHDTVEDTNVVTF+ +E EFGATVR IVEGETKVSKLGK
Sbjct: 180 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFDSLEREFGATVRHIVEGETKVSKLGK 239
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LK KNEN SVQDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTLSHMPPHKQ SIATE
Sbjct: 240 LKRKNENDSVQDVKADDLRQMFLAMTQEVRVIIVKLADRLHNMRTLSHMPPHKQVSIATE 299
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TLQVFAPLAKLLGMYQIKSELENLSFMYTNA+DYA VKRRVADLYKEHEKEL EANKILM
Sbjct: 300 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAQDYAMVKRRVADLYKEHEKELVEANKILM 359
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+KIEDDQFLDLMTVKT++R+VCKEPYSIYKAV KSRGSINEVNQIAQLRIIIKPKPC+GV
Sbjct: 360 EKIEDDQFLDLMTVKTDVRAVCKEPYSIYKAVHKSRGSINEVNQIAQLRIIIKPKPCTGV 419
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
GPLCS QQICYHVLGLVHGIWTP+PRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 420 GPLCSAQQICYHVLGLVHGIWTPVPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 479
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRTEEMD+IAERGIAAHYSGRVFV GL+G A G S RGKT CLNNANIALRISWLNA
Sbjct: 480 QIRTEEMDVIAERGIAAHYSGRVFVGGLIGRATSGG-SSRGKTGCLNNANIALRISWLNA 538
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
IREWQEEFVGNMTSREFVDT+T+DLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTEIG
Sbjct: 539 IREWQEEFVGNMTSREFVDTVTKDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEIG 598
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMVAAKVNGNLVSP HVLANAEVVEIITYNALSSKSAFQRHKQWL+HAKTRSARHKIMK
Sbjct: 599 NKMVAAKVNGNLVSPMHVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMK 658
Query: 656 FLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVR 715
FLREQAALSA+EITADTV DF+A+S ES +E+ S SK K +WE+ LMN V+MSS ++
Sbjct: 659 FLREQAALSAAEITADTVNDFIANSEVESNLEEASRHSKGGKSVWERFLMNFVEMSSSMK 718
Query: 716 NSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLP 775
+ K V N S PKVNGKHN++V V ++E L +Q N AKM H N+P KEVLP
Sbjct: 719 SPKDVFHPQNGSTQVPKVNGKHNRQVQNVNLESEKPL-TQGNGVAKMKHLNIPTCKEVLP 777
Query: 776 GLESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
GLESW+ +K+A+WH+ EGHSIQW VVCIDRRG V + S
Sbjct: 778 GLESWKTNKVASWHSHEGHSIQWLCVVCIDRRGMMAEVTAALAS 821
>gi|356570978|ref|XP_003553659.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
Length = 882
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/809 (78%), Positives = 693/809 (85%), Gaps = 5/809 (0%)
Query: 12 ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
ECVN CK +GDG+ R+ DCS+LSCAWKAPRALTGFLAST HP S+LS G GRRNR
Sbjct: 12 ECVNACKPWRGDGNVRF-DCSLLSCAWKAPRALTGFLASTAHPHQCSNLSNGRNGRRNRY 70
Query: 72 NSRCEAFDVGSWC-TEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
N CEAF VG C E D++L RS A +RW+LC S ++S+ E S E L
Sbjct: 71 NFGCEAFSVGGSCHDEPLDIILFEGYSRSISCQNAPRRWQLCCS--LASNTVTEFSAESL 128
Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
WEDL+P ISYLSP ELELV A MLAF+AHDGQKRRSGEPFIIHPVEVARILGELELDWE
Sbjct: 129 WEDLKPAISYLSPKELELVYNAFMLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWE 188
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGLLHDTVEDTNVVTFERIEEEFGATVR IVEGETKVSKLGKLK KNEN SVQDVKA
Sbjct: 189 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKA 248
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ+SIA ETLQVFAPLAKLLGMY
Sbjct: 249 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAMETLQVFAPLAKLLGMY 308
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
QIKSELENLSFMYTNAEDYAKVKRRVA+LYKEHEKEL EANK+LMKKI+DDQFLDL+TVK
Sbjct: 309 QIKSELENLSFMYTNAEDYAKVKRRVAELYKEHEKELLEANKMLMKKIQDDQFLDLLTVK 368
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
T++R+VCKEPYSIYKAVLKS+ SI+E+NQIAQLRIIIKPK C GVGPLC+PQQICYHVLG
Sbjct: 369 TKVRAVCKEPYSIYKAVLKSKSSISEINQIAQLRIIIKPKQCIGVGPLCNPQQICYHVLG 428
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
L+HGIWTPIPR++KDYIATPKPNGYQSL TT+IPFLYESMFRLEVQIRTEEMDLIAERGI
Sbjct: 429 LIHGIWTPIPRSVKDYIATPKPNGYQSLQTTVIPFLYESMFRLEVQIRTEEMDLIAERGI 488
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAHYSGR FVTGLVG A P+ +S RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 489 AAHYSGREFVTGLVGSATPSSKSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 548
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFVDTITRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKMVAAKVNGNLVSP
Sbjct: 549 EFVDTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSP 608
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITA 670
HVLANAEVVEIITYNALSSKSAFQRHKQWL+HAKTRSARHKIMKFLREQAA SA++IT
Sbjct: 609 AHVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAARSAADITT 668
Query: 671 DTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDNASLWA 730
+ V DFV DS +SE E+LS GS K W K+ +N ++S+ R S+ V +N S W
Sbjct: 669 EAVNDFVTDSDGDSESEELSKGSSGSKYTWGKMFVNGAEISTLGR-SETVLQSNNGSAWI 727
Query: 731 PKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKIATWHN 790
PKVNGKHNK V + +GE+ Q N AK++ N+P YKEVLPGLESWQA KIA+WHN
Sbjct: 728 PKVNGKHNKHVQHESFNGKGEMLLQGNLVAKIIQVNIPRYKEVLPGLESWQAQKIASWHN 787
Query: 791 LEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
+EGHSIQW SVVCIDR+G V M +
Sbjct: 788 MEGHSIQWLSVVCIDRKGMMAEVTAAMAT 816
>gi|356503913|ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
Length = 882
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/809 (78%), Positives = 690/809 (85%), Gaps = 5/809 (0%)
Query: 12 ECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRI 71
ECVN CKL +GDG+GR+ DCS+LS AWKAPR LTGFLAST HP S LS G GRRNR
Sbjct: 12 ECVNACKLWRGDGNGRF-DCSLLSSAWKAPRVLTGFLASTAHPHQCSDLSNGRNGRRNRY 70
Query: 72 NSRCEAFDVGSWC-TEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERL 130
N CE F V C E D+VL RS L A +RW+LC S ++ DA + S E L
Sbjct: 71 NFGCETFSVDGSCRDEPIDIVLFEGCSRSMLSQNAPRRWQLCCS--LAPDAVTDFSAESL 128
Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
WEDL P ISYLSP ELELV A MLAF+AHDGQKRRSGEPFIIHPVEVARILGELELDWE
Sbjct: 129 WEDLTPVISYLSPKELELVYNAFMLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWE 188
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGLLHDTVEDTNVVTFERIEEEFGATVR IVEGETKVSKLGKLK KNEN SVQDVKA
Sbjct: 189 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKA 248
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ+SIA ETLQVFAPLAKLLGMY
Sbjct: 249 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAMETLQVFAPLAKLLGMY 308
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
QIKSELENLSFMYTNAEDYAKVKRRVA+LYKEHEKEL EANK+LMKKI+DDQFLDL+TVK
Sbjct: 309 QIKSELENLSFMYTNAEDYAKVKRRVAELYKEHEKELLEANKMLMKKIQDDQFLDLLTVK 368
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
TE+R+VCKEPYSIYKAVLKS+ SINE+NQIAQLRIIIKPK C GVGPLC+PQQICYHVLG
Sbjct: 369 TEVRAVCKEPYSIYKAVLKSKSSINEINQIAQLRIIIKPKQCIGVGPLCNPQQICYHVLG 428
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
L+HGIWTPIPR++KDYIATPKPNGYQSL TT+IPFLYESMFRLEVQIRTEEMDLIAERGI
Sbjct: 429 LIHGIWTPIPRSVKDYIATPKPNGYQSLQTTVIPFLYESMFRLEVQIRTEEMDLIAERGI 488
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAHYSGR FVTGLVG A P+ +S RGKTVCLNNANIALRI WLNAIREWQEEFVGNM+SR
Sbjct: 489 AAHYSGREFVTGLVGSATPSSKSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSR 548
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFVDTITRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKMVAAKVNGNLVSP
Sbjct: 549 EFVDTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSP 608
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITA 670
HVLANAEVVEIITYNALS+KSAFQRHKQWL+HAKTRSARHKIMKFLREQAA SA++IT
Sbjct: 609 AHVLANAEVVEIITYNALSTKSAFQRHKQWLQHAKTRSARHKIMKFLREQAARSAADITT 668
Query: 671 DTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDNASLWA 730
+ V DFV DS +SE E++S GS K W K+ +N ++S+ R S+ V +N S W
Sbjct: 669 EAVNDFVIDSDGDSESEEVSKGSSGSKYTWGKMFVNGAEISTSGR-SETVLQSNNGSAWI 727
Query: 731 PKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKIATWHN 790
PKVNGKHNK V + +GE+ Q N AKM+ N+P YKEVLPGLESWQA KIA+WHN
Sbjct: 728 PKVNGKHNKHVQHESFNGKGEMLLQGNLVAKMIQVNIPRYKEVLPGLESWQAQKIASWHN 787
Query: 791 LEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
+EGHSIQW SVVCIDR+G V + +
Sbjct: 788 MEGHSIQWLSVVCIDRKGMMAEVTTALAT 816
>gi|30268666|dbj|BAC76004.1| RelA-SpoT like protein RSH1 [Nicotiana tabacum]
Length = 876
Score = 1274 bits (3297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/814 (77%), Positives = 703/814 (86%), Gaps = 8/814 (0%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
MASA SMSVS+ECVNICK KGD SGR+ DCSVLSCAWKAPRALTGFLASTTHP+ SS
Sbjct: 1 MASATSMSVSIECVNICKSWKGDVSGRF-DCSVLSCAWKAPRALTGFLASTTHPSQCSST 59
Query: 61 SLGPTGRRNRIN-SRCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
GRRNR++ RC D+ ++ + L +P S LL +W+LC S S SS
Sbjct: 60 PY-RYGRRNRLHRCRCYTSDMDERYSDEA----LQAVPGSRLLLTTSSKWKLCCSLSFSS 114
Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
++ +E SPE LWE L P+ISYLS ELELVR+AL LAFEAHDGQKRRSGEPFIIHPV VA
Sbjct: 115 ESCEEISPESLWEGLIPSISYLSYKELELVRKALNLAFEAHDGQKRRSGEPFIIHPVAVA 174
Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
+ILG+LELDWESIAAGLLHDTVEDTNVVTFERIE+EFG TVRRIVEGETKVSKLGK+KCK
Sbjct: 175 QILGQLELDWESIAAGLLHDTVEDTNVVTFERIEKEFGPTVRRIVEGETKVSKLGKIKCK 234
Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
+E+H VQDVKADDLRQMFL+MTEEVRVIIVKLADRLHNMRTLSHMPPHKQS IATETLQV
Sbjct: 235 DESH-VQDVKADDLRQMFLSMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSGIATETLQV 293
Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
FAPLAKLLG+YQIKSELENL+FMYTNA+DYA+V+RR+A+LYKEHEKEL+EA +ILMKKIE
Sbjct: 294 FAPLAKLLGIYQIKSELENLAFMYTNAQDYARVQRRIAELYKEHEKELKEAKRILMKKIE 353
Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
+DQFLDL+TVKTEI S+CKEPYSIYKAVLKS+ SINEVNQIAQLRIIIKPKPC GV PLC
Sbjct: 354 EDQFLDLVTVKTEIHSICKEPYSIYKAVLKSKNSINEVNQIAQLRIIIKPKPCVGVRPLC 413
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
S QQICYHVLGLVHGIWTPIPRAMKDY+ATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 414 SAQQICYHVLGLVHGIWTPIPRAMKDYVATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 473
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEMDLIAERGIAAHYSG+ FV GLVGH NGRS RGK VCLNNANIALRI WLNAIREW
Sbjct: 474 EEMDLIAERGIAAHYSGKGFVNGLVGHVITNGRSSRGKIVCLNNANIALRIGWLNAIREW 533
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
QEEFVGNM+SREFVDTITRDLLGSRVFVFTP GEIK+LPKGATV+DYAYMIHTEIGNKMV
Sbjct: 534 QEEFVGNMSSREFVDTITRDLLGSRVFVFTPGGEIKHLPKGATVIDYAYMIHTEIGNKMV 593
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AAKVNGNLVSP HVLANAEVVEIITYN LSSKSAF+RHK+WL+HAKTRSARHKIMKFLRE
Sbjct: 594 AAKVNGNLVSPLHVLANAEVVEIITYNGLSSKSAFERHKEWLQHAKTRSARHKIMKFLRE 653
Query: 660 QAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKA 719
QAALSA+EIT D+V +FVA+S +S +E+L+D SK+ K WEKIL NV++ SS +++
Sbjct: 654 QAALSATEITVDSVKEFVAESEGDSGLEELADYSKETKHSWEKILKNVMETSSASMSTED 713
Query: 720 VCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLES 779
+ ++S+ PKVNGKHNK + ++ KA GE SQ N K++ AN+P Y+EVLPGL+
Sbjct: 714 IFQLRSSSIQIPKVNGKHNKCMQHMSLKATGETLSQGNGVGKVILANIPRYREVLPGLDG 773
Query: 780 WQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSV 813
W ASK+ATWHNLEGHS+QW VV IDR+G V
Sbjct: 774 WLASKVATWHNLEGHSVQWLCVVNIDRKGMMADV 807
>gi|449469300|ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 883
Score = 1273 bits (3294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/811 (78%), Positives = 695/811 (85%), Gaps = 10/811 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
MASA SMSVS+ECVNICK KGDGS YDCS+LSCAWKAPR LTGFLASTTH H SS
Sbjct: 1 MASAPSMSVSLECVNICKFSKGDGSSGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSF 60
Query: 61 SLGPTGRRNRINSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
G+R+RINSR E+ +V W + E S+ V LG+L +S LLH C+R + C S +SS
Sbjct: 61 LYSKNGKRSRINSRFESINVRGWYSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSS 120
Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
DAF E SPE LWEDL+PTISYLSP ELELV AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 121 DAFDEVSPEGLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 180
Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
RILGELELDWE+IAAGLLHDTVEDT+ VTFE+IEEEFGATVR IVEGETKVSKLGKLKCK
Sbjct: 181 RILGELELDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCK 240
Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
NE +SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 241 NECNSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQV 300
Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
FAPLAKLLGMYQIKSELENLSFMYTN EDY+KVKRRVADL KEHEKEL EA KILMK+I+
Sbjct: 301 FAPLAKLLGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHEKELIEAKKILMKRIQ 360
Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
+DQFLDLMT++T++RSVCKEPYSIYKAVLKS+ SI+EVNQIAQLRIII+PK VGPLC
Sbjct: 361 EDQFLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGIDVGPLC 420
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 421 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 480
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEMDLIAERGIA HY G VT V ++ PN RS RGK VCL++ANIALRI WLNAIREW
Sbjct: 481 EEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIALRIGWLNAIREW 540
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
QEEFVGNM+SREFVDT+TRDLLGSRVFVFTPRGEIKNLPKGATV+DYAYMIHTE+GNKMV
Sbjct: 541 QEEFVGNMSSREFVDTVTRDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEVGNKMV 600
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AAKVNGNLVSP HVL NAEVVEIITYNALS KSA+QRHKQWL+HAKTRSARHKIMKFLRE
Sbjct: 601 AAKVNGNLVSPMHVLVNAEVVEIITYNALSGKSAYQRHKQWLQHAKTRSARHKIMKFLRE 660
Query: 660 QAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKA 719
QAALSA+EITADT+ DF+ADS EESE E+ S + KPLWEKIL ++V +SS +N K
Sbjct: 661 QAALSAAEITADTITDFIADSEEESESEESPVVSTKKKPLWEKIL-DMVDISSTRKNLKD 719
Query: 720 VCSDDNASLWAPKVNGKHNKRVHYVGS--KAEGELSSQENSFAKMMHANVPMYKEVLPGL 777
N + PKVNGKHN HYV KAEG++ S N A +M P+YKEVLPGL
Sbjct: 720 DFQTKNNKVSIPKVNGKHN---HYVNVKLKAEGDILSMGNGVAPIMQ---PLYKEVLPGL 773
Query: 778 ESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
+SWQ SK+ +WH+LEG SIQW VVCIDRRG
Sbjct: 774 DSWQISKVTSWHSLEGRSIQWLCVVCIDRRG 804
>gi|449484441|ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophosphokinase-like [Cucumis
sativus]
Length = 883
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/811 (78%), Positives = 694/811 (85%), Gaps = 10/811 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
MASA SMSVS+ECVNICK KGDGS YDCS+LSCAWKAPR LTGFLASTTH H SS
Sbjct: 1 MASAPSMSVSLECVNICKFSKGDGSSGRYDCSILSCAWKAPRVLTGFLASTTHSLHCSSF 60
Query: 61 SLGPTGRRNRINSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
G+R+RINSR E+ +V W + E S+ V LG+L +S LLH C+R + C S +SS
Sbjct: 61 LYSKNGKRSRINSRFESINVRGWYSNEVSNHVHLGRLLKSGLLHDVCRRKKFCCSSFLSS 120
Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
DAF E SPE LWEDL+PTISYLSP ELELV AL LAFEAHDGQKRRSGEPFIIHPVEVA
Sbjct: 121 DAFDEVSPEGLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQKRRSGEPFIIHPVEVA 180
Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
RILGELELDWE+IAAGLLHDTVEDT+ VTFE+IEEEFGATVR IVEGETKVSKLGKLKCK
Sbjct: 181 RILGELELDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCK 240
Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
NE +SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 241 NECNSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQV 300
Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
FAPLAKLLGMYQIKSELENLSFMYTN EDY+KVKRRVADL KEHEKEL EA KILMK+I+
Sbjct: 301 FAPLAKLLGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHEKELIEAKKILMKRIQ 360
Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
+DQFLDLMT++T++RSVCKEPYSIYKAVLKS+ SI+EVNQIAQLRIII+PK VGPLC
Sbjct: 361 EDQFLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGIDVGPLC 420
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRT
Sbjct: 421 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRT 480
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEMDLIAERGIA HY G VT V ++ PN RS RGK VCL++ANIALRI WLNAIREW
Sbjct: 481 EEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIALRIGWLNAIREW 540
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
QEEFVGNM+SREFVDT+TRDLLGSR FVFTPRGEIKNLPKGATV+DYAYMIHTE+GNKMV
Sbjct: 541 QEEFVGNMSSREFVDTVTRDLLGSRXFVFTPRGEIKNLPKGATVIDYAYMIHTEVGNKMV 600
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AAKVNGNLVSP HVL NAEVVEIITYNALS KSA+QRHKQWL+HAKTRSARHKIMKFLRE
Sbjct: 601 AAKVNGNLVSPMHVLVNAEVVEIITYNALSGKSAYQRHKQWLQHAKTRSARHKIMKFLRE 660
Query: 660 QAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKA 719
QAALSA+EITADT+ DF+ADS EESE E+ S + KPLWEKIL ++V +SS +N K
Sbjct: 661 QAALSAAEITADTITDFIADSEEESESEESPVVSTKKKPLWEKIL-DMVDISSTRKNLKD 719
Query: 720 VCSDDNASLWAPKVNGKHNKRVHYVGS--KAEGELSSQENSFAKMMHANVPMYKEVLPGL 777
N + PKVNGKHN HYV KAEG++ S N A +M P+YKEVLPGL
Sbjct: 720 DFQTKNNKVSIPKVNGKHN---HYVNVKLKAEGDILSMGNGVAPIMQ---PLYKEVLPGL 773
Query: 778 ESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
+SWQ SK+ +WH+LEG SIQW VVCIDRRG
Sbjct: 774 DSWQISKVTSWHSLEGRSIQWLCVVCIDRRG 804
>gi|307066606|gb|ADN23834.1| RSH1 [Ipomoea nil]
Length = 885
Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/810 (75%), Positives = 692/810 (85%), Gaps = 4/810 (0%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNICK SGR +C+VL CA KAPRALTG LAST HP +
Sbjct: 1 MTSASSMSVSVECVNICKFWNSVVSGRL-NCNVLPCASKAPRALTGLLASTAHPPQFCAG 59
Query: 61 SLGPTGRRNRINSRCEAFDVGSWCT-EGSDLVLLGKLPRSSLLHVACKRWRLCLSPSVSS 119
S G GRR+ + RC A D+G W E S++V L S L+H A +W+L S S S
Sbjct: 60 SYGRAGRRSSVRCRCNAHDIGGWSPGEDSEIVHPHTLLSSRLIHSASCKWKLRCSSSFSP 119
Query: 120 DAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVA 179
++E SPE LWEDL+PTISYLSP ELELV+ AL LAFEAHDGQKRRSGEPFIIHPV VA
Sbjct: 120 KPYEEISPESLWEDLQPTISYLSPKELELVQNALNLAFEAHDGQKRRSGEPFIIHPVAVA 179
Query: 180 RILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCK 239
+ILGELELDWESIAAGLLHDTVEDTNVVTFERIE+EFG TVR IVEGETKVSKLGK+K K
Sbjct: 180 QILGELELDWESIAAGLLHDTVEDTNVVTFERIEQEFGVTVRHIVEGETKVSKLGKIKYK 239
Query: 240 NENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQV 299
+ENHS QDVKADDLRQMFL+MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIA ETLQV
Sbjct: 240 DENHSAQDVKADDLRQMFLSMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAKETLQV 299
Query: 300 FAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIE 359
FAPLAKLLGMYQIKSELENL+FMYTNA+DYAKV+RR+++LYKEHEKEL EA +IL KKIE
Sbjct: 300 FAPLAKLLGMYQIKSELENLAFMYTNAQDYAKVQRRISELYKEHEKELLEAKRILTKKIE 359
Query: 360 DDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
DDQFLDLM V E+RSVCKEPYSIY++VLKS+ SINEVNQIAQ+R++IKPKPC+GVGPLC
Sbjct: 360 DDQFLDLMLVNAEVRSVCKEPYSIYRSVLKSKSSINEVNQIAQIRVVIKPKPCAGVGPLC 419
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
+ QQICYHVLGLVHGIWTPIPRA+KDYIATPKPNGYQSLHTT+IPFLYESM RLEVQIRT
Sbjct: 420 NAQQICYHVLGLVHGIWTPIPRAVKDYIATPKPNGYQSLHTTVIPFLYESMLRLEVQIRT 479
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRS-PRGKTVCLNNANIALRISWLNAIRE 538
EEMDLIAERGIAAHYSG+ + G++GHA NG S GKTVCLNNAN+ALRI WLNAIRE
Sbjct: 480 EEMDLIAERGIAAHYSGK-GLNGVIGHAIHNGSSRGHGKTVCLNNANVALRIGWLNAIRE 538
Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
WQEEFVGNM SREFVDT+TRDLLGSRVFVFTPRGEIKNLP+GATV+DYAYMIHTEIGNKM
Sbjct: 539 WQEEFVGNMASREFVDTVTRDLLGSRVFVFTPRGEIKNLPRGATVIDYAYMIHTEIGNKM 598
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
VAAKVNGN+VSP HVLANAEVVEIITY+ LS+KSAFQRHKQWL+HAKTRSARHKIMKFLR
Sbjct: 599 VAAKVNGNIVSPVHVLANAEVVEIITYSGLSNKSAFQRHKQWLQHAKTRSARHKIMKFLR 658
Query: 659 EQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSK 718
EQAALSA+EITA++V +F A+SG++SE E + D SK K WEKIL NVV+MSS + +
Sbjct: 659 EQAALSATEITAESVNEFAAESGDDSETEKVFDSSKGTKHTWEKILKNVVKMSSATMSEE 718
Query: 719 AVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLE 778
+ +++S+ PKVNGKH+K + +V KAEGE SQ N + + AN+PMY+EV PGLE
Sbjct: 719 DMFHFNSSSIQIPKVNGKHSKHLQHVSLKAEGETLSQGNGVGRTICANIPMYREVFPGLE 778
Query: 779 SWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
+W A+K+++W+NLEGHS+QW VVC+DRRG
Sbjct: 779 NWLANKVSSWNNLEGHSVQWLCVVCLDRRG 808
>gi|297814083|ref|XP_002874925.1| hypothetical protein ARALYDRAFT_490346 [Arabidopsis lyrata subsp.
lyrata]
gi|297320762|gb|EFH51184.1| hypothetical protein ARALYDRAFT_490346 [Arabidopsis lyrata subsp.
lyrata]
Length = 883
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/823 (72%), Positives = 673/823 (81%), Gaps = 10/823 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNIC L KGDG+ R DC+ LSCAWKAPRALTGFLA+T HP S
Sbjct: 1 MTSASSMSVSVECVNICNLTKGDGNARS-DCNALSCAWKAPRALTGFLATTAHPPVCSLY 59
Query: 61 SLGPTGRRNRINS---RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPSV 117
S G GR+NR+ + R ++VG +E D+V + + +S L KRW L P
Sbjct: 60 SCGRNGRKNRMKACAWRRYEYEVGF--SEAPDVVNVRNILKSKLSCGGHKRWELYCVPVE 117
Query: 118 SSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVE 177
SS A + + E LWEDL P+ISYL ELE V++ L LAFEAH GQKRRSGEPFIIHPV
Sbjct: 118 SSGASDDVTVETLWEDLFPSISYLPCKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHPVA 177
Query: 178 VARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLK 237
VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGKLK
Sbjct: 178 VARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKLK 237
Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
CK E+ S+QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA ETL
Sbjct: 238 CKTESESIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETL 297
Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
QVFAPLAKLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+KK
Sbjct: 298 QVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKK 357
Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQ-LRIIIKPKPCSGVG 416
IEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQ LRI++KPKP GVG
Sbjct: 358 IEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVG 417
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
PLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQ
Sbjct: 418 PLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQ 477
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRTEEMDLIAERGIA +Y+G+ GLV +A P GR+ RGKT CLNNA+ ALR+ WLNAI
Sbjct: 478 IRTEEMDLIAERGIAVYYNGKALSAGLVANAVPLGRNSRGKTGCLNNADFALRVGWLNAI 537
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
REWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGN
Sbjct: 538 REWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGN 597
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KMVAAKVNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM+F
Sbjct: 598 KMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRF 657
Query: 657 LREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRN 716
LREQAA A+EIT D V DFVADS +S++EDL++ S++ WEKIL+NV Q S ++
Sbjct: 658 LREQAAQCAAEITQDQVNDFVADS--DSDLEDLTEDSRKSLQWWEKILVNVKQFQSQDKS 715
Query: 717 SKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPG 776
+ N S+W PKVNGKHNK + S E E + AK++ AN+P YKEVLPG
Sbjct: 716 RDTTPTPQNGSVWVPKVNGKHNKAIKN-SSLDEPEFLLPGDGIAKILPANIPAYKEVLPG 774
Query: 777 LESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
L+SW+ SKI TWH+LEGHSI+W VV +DR+G V V+ +
Sbjct: 775 LDSWRDSKITTWHHLEGHSIEWLCVVSMDRKGIIAEVTTVLAA 817
>gi|18411893|ref|NP_567226.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
gi|7141304|gb|AAF37281.1| RSH1 [Arabidopsis thaliana]
gi|332656747|gb|AEE82147.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
Length = 883
Score = 1196 bits (3093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/824 (72%), Positives = 677/824 (82%), Gaps = 12/824 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNIC L KGDG+ R DCS LSCAWKAPRALTGFLAST HP S
Sbjct: 1 MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59
Query: 61 SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
S G GR++R+ + R E ++VG +E V + + +S L KRW L C+S
Sbjct: 60 SCGRNGRKSRMKACAWQRYE-YEVGF--SEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116
Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SS A + + E LWEDL P+ISYL ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQLRI++KPKP GV
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGV 416
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
GPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 417 GPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 476
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRTEEMDLIAERGIA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNA
Sbjct: 477 QIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNA 536
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
IREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIG
Sbjct: 537 IREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIG 596
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMVAAKVNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM+
Sbjct: 597 NKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMR 656
Query: 656 FLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVR 715
FLREQAA A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S +
Sbjct: 657 FLREQAAQCAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDK 714
Query: 716 NSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLP 775
+ + N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVLP
Sbjct: 715 SRDTTPAPQNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVLP 773
Query: 776 GLESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
GL+SW+ SKIATWH+LEG SI+W VV +DR+G V V+ +
Sbjct: 774 GLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAA 817
>gi|42572809|ref|NP_974501.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
gi|332656746|gb|AEE82146.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
Length = 816
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/813 (73%), Positives = 673/813 (82%), Gaps = 12/813 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNIC L KGDG+ R DCS LSCAWKAPRALTGFLAST HP S
Sbjct: 1 MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59
Query: 61 SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
S G GR++R+ + R E ++VG +E V + + +S L KRW L C+S
Sbjct: 60 SCGRNGRKSRMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116
Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SS A + + E LWEDL P+ISYL ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQLRI++KPKP GV
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGV 416
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
GPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLEV
Sbjct: 417 GPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEV 476
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRTEEMDLIAERGIA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNA
Sbjct: 477 QIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNA 536
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
IREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIG
Sbjct: 537 IREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIG 596
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMVAAKVNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM+
Sbjct: 597 NKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMR 656
Query: 656 FLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVR 715
FLREQAA A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S +
Sbjct: 657 FLREQAAQCAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDK 714
Query: 716 NSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLP 775
+ + N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVLP
Sbjct: 715 SRDTTPAPQNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVLP 773
Query: 776 GLESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
GL+SW+ SKIATWH+LEG SI+W VV +DR+G
Sbjct: 774 GLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKG 806
>gi|42570124|ref|NP_849287.2| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
gi|332656748|gb|AEE82148.1| RelA-SpoT like protein RSH1 [Arabidopsis thaliana]
Length = 884
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/825 (72%), Positives = 677/825 (82%), Gaps = 13/825 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNIC L KGDG+ R DCS LSCAWKAPRALTGFLAST HP S
Sbjct: 1 MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59
Query: 61 SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
S G GR++R+ + R E ++VG +E V + + +S L KRW L C+S
Sbjct: 60 SCGRNGRKSRMKACAWQRYE-YEVGF--SEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116
Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SS A + + E LWEDL P+ISYL ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQ-LRIIIKPKPCSG 414
KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQ LRI++KPKP G
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVG 416
Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
VGPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLE
Sbjct: 417 VGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLE 476
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
VQIRTEEMDLIAERGIA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLN
Sbjct: 477 VQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLN 536
Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
AIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEI
Sbjct: 537 AIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEI 596
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIM 654
GNKMVAAKVNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM
Sbjct: 597 GNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIM 656
Query: 655 KFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPV 714
+FLREQAA A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S
Sbjct: 657 RFLREQAAQCAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQD 714
Query: 715 RNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVL 774
++ + N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVL
Sbjct: 715 KSRDTTPAPQNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVL 773
Query: 775 PGLESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
PGL+SW+ SKIATWH+LEG SI+W VV +DR+G V V+ +
Sbjct: 774 PGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAA 818
>gi|110742286|dbj|BAE99068.1| RSH1 [Arabidopsis thaliana]
Length = 884
Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/825 (72%), Positives = 676/825 (81%), Gaps = 13/825 (1%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSL 60
M SA+SMSVSVECVNIC L KGDG+ R DCS LSCAWKAPRALTGFLAST HP S
Sbjct: 1 MTSASSMSVSVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVY 59
Query: 61 SLGPTGRRNRINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSP 115
S G GR++R+ + R E ++VG +E V + + +S L KRW L C+S
Sbjct: 60 SCGRNGRKSRMKACAWQRYE-YEVGF--SEAPYFVNVRNILKSRLSCGGHKRWELYCVSA 116
Query: 116 SVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SS A + + E LWEDL P+ISYL ELE V++ L LAFEAH GQKRRSGEPFIIHP
Sbjct: 117 ESSSGASSDVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHP 176
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
V VARILGELELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGK
Sbjct: 177 VAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGK 236
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LKCK E+ ++QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA E
Sbjct: 237 LKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGE 296
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TLQVFAPLAKLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+
Sbjct: 297 TLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILV 356
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQ-LRIIIKPKPCSG 414
KKIEDDQFLDL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQ LRI++KPKP G
Sbjct: 357 KKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVG 416
Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
VGPLCSPQQICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT+IPFLYESMFRLE
Sbjct: 417 VGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLE 476
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
VQIRTEEMDLIAER IA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLN
Sbjct: 477 VQIRTEEMDLIAERDIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLN 536
Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
AIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEI
Sbjct: 537 AIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEI 596
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIM 654
GNKMVAAKVNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM
Sbjct: 597 GNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIM 656
Query: 655 KFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPV 714
+FLREQAA A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S
Sbjct: 657 RFLREQAAQCAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQD 714
Query: 715 RNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVL 774
++ + N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVL
Sbjct: 715 KSRDTTPAPQNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVL 773
Query: 775 PGLESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVMQS 819
PGL+SW+ SKIATWH+LEG SI+W VV +DR+G V V+ +
Sbjct: 774 PGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAA 818
>gi|115452933|ref|NP_001050067.1| Os03g0340900 [Oryza sativa Japonica Group]
gi|12583661|dbj|BAB21484.1| chloroplast RelA homologue 1 [Oryza sativa Japonica Group]
gi|108708064|gb|ABF95859.1| RelA/SpoT protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548538|dbj|BAF11981.1| Os03g0340900 [Oryza sativa Japonica Group]
gi|222624902|gb|EEE59034.1| hypothetical protein OsJ_10786 [Oryza sativa Japonica Group]
Length = 892
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/801 (68%), Positives = 629/801 (78%), Gaps = 25/801 (3%)
Query: 24 GSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINSRCEAFDVG-- 81
G GR Y+CSVLSCAW APRALTG LASTT S S + G R R S+ +
Sbjct: 28 GGGRPYECSVLSCAWNAPRALTGALASTTAQCSSCSHAEAGAGWRRRGQSQRSNNSLLHI 87
Query: 82 SWCTEGSDLVLLGKLPRSSLLHVA-----CKRWRLCLSPS------VSSDAFKEDSPERL 130
+W EG + GK S H K W + P+ SS++F SPE L
Sbjct: 88 TW-AEG---INRGKFGYGSSAHSFPTGNFFKSWSTSVDPTWRVFCYSSSESFNHISPETL 143
Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
WEDL+P ISYL P EL V AL LA+EAH+GQKRRSGEPFIIHPVEVARILGE ELDWE
Sbjct: 144 WEDLKPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGEHELDWE 203
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGLLHDTVEDT++VTFERIE EFG TVRRIVEGETKVSKLGKL+CKNE +S QDVKA
Sbjct: 204 SIAAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGKLQCKNEGNSKQDVKA 263
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+DLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY
Sbjct: 264 EDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAMETLQVFAPLAKLLGMY 323
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+IKSELE LSFMY N D+A++K+RV DLYK HE+ELEEAN+IL +KI +DQFLDL++V+
Sbjct: 324 RIKSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEANQILGEKIAEDQFLDLVSVE 383
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
T++RSVCKE YSIYK LKS+ SINE+NQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLG
Sbjct: 384 TQVRSVCKELYSIYKTALKSKSSINEINQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLG 443
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
LVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGI
Sbjct: 444 LVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGI 503
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAHYSGR V+G V +GR+ GK +CLNN ALRI WLNAIREWQEEFVGNM+SR
Sbjct: 504 AAHYSGRGVVSGPVRPGISSGRNSNGKVICLNNTGFALRIGWLNAIREWQEEFVGNMSSR 563
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAKVNGNLVSP
Sbjct: 564 EFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSP 623
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITA 670
HVLANAEVVEII Y+ LS+K AFQRH+QWL+HAKTRSARHKIMKFLREQAALSA+EITA
Sbjct: 624 IHVLANAEVVEIIIYDKLSAKYAFQRHQQWLQHAKTRSARHKIMKFLREQAALSAAEITA 683
Query: 671 DTVGDFVADSGEESEVEDLSDGSKQDKPL---WEKILMNVVQMSSPVRNSKAVCSDDNAS 727
D V +FVAD +ES+ E S S ++K W+KIL N ++S + S N S
Sbjct: 684 DAVNNFVADLEDESDYEQ-SIPSSENKDYTFNWQKIL-NSDKLSFGNKKSDCFLPVKNVS 741
Query: 728 LWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKIAT 787
+ PKVNGKHNK V +G K G + + +SF +H V KEVLP +++W+A KI
Sbjct: 742 V--PKVNGKHNKTVKELGIKINGS-TFRGDSFTDFIHPGVSSSKEVLPSVDNWKAGKICA 798
Query: 788 WHNLEGHSIQWFSVVCIDRRG 808
WHN EG SIQW +VC+DR+G
Sbjct: 799 WHNTEGSSIQWLCIVCVDRKG 819
>gi|357112304|ref|XP_003557949.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 890
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/819 (66%), Positives = 636/819 (77%), Gaps = 19/819 (2%)
Query: 3 SAASMSVSVECVNICKLP-KGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLS 61
+AA + S+EC++ C+ KG G GR Y+CSVLSCAW APRALTG LASTT + S
Sbjct: 5 TAAVSASSMECMSSCRASWKGVGGGRPYECSVLSCAWNAPRALTGSLASTTQCSSCSHAE 64
Query: 62 LGPTGRRNRINSRCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACK----------RWRL 111
G RR + R + C E + L + P +S + K W++
Sbjct: 65 AGGGWRRRGRSRRSNNTLLHVTCAEDVNKGKLCQGPPASFVSSGKKFGSWSTPVESTWKV 124
Query: 112 CLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPF 171
S SS+ SPE LWE LRP ISYL P EL V AL LA+EAH+GQKRRSGEPF
Sbjct: 125 --SCHSSSEPLNLVSPETLWEGLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPF 182
Query: 172 IIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVS 231
IIHPVEVARILGE ELDWESIAAGLLHDTVEDT++VTFE I+ EFGATVRRIVEGETKVS
Sbjct: 183 IIHPVEVARILGEHELDWESIAAGLLHDTVEDTDMVTFETIQNEFGATVRRIVEGETKVS 242
Query: 232 KLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSS 291
KLGKL+CKNE S QDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +
Sbjct: 243 KLGKLQCKNECSSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYA 302
Query: 292 IATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN 351
IA ETLQVFAPLAKLLGMYQIKSELE LSFMY N D+ ++++RV D++K HE+ELEEAN
Sbjct: 303 IAMETLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFTELRKRVEDIFKAHEQELEEAN 362
Query: 352 KILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP 411
+IL +KI +DQFLDL++V+TE+RSVCKE YSIY+ LKS+ SINEVNQ+AQLRIIIKPK
Sbjct: 363 RILKQKIAEDQFLDLVSVETEVRSVCKELYSIYRTALKSKSSINEVNQVAQLRIIIKPKS 422
Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMF 471
C+GVGPLC+ QQICYHVLGLVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF
Sbjct: 423 CNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMF 482
Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
LEVQIRTE+MD+IAERGIAAHYSGR V+G V +GR+ GK +CLNN ALRI
Sbjct: 483 HLEVQIRTEDMDMIAERGIAAHYSGRGVVSGPVRPGISSGRNSDGKVICLNNTGFALRIG 542
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIH 591
WLNAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATV+DYAY+IH
Sbjct: 543 WLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVIDYAYLIH 602
Query: 592 TEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARH 651
TEIGNKMVAAKVNGNLVSP H LANAEVVEIITY+ LS K AF+RH+QWL+HAKTRSARH
Sbjct: 603 TEIGNKMVAAKVNGNLVSPIHALANAEVVEIITYDKLSGKYAFERHQQWLQHAKTRSARH 662
Query: 652 KIMKFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQD--KPLWEKILMNVVQ 709
KIMKFLREQAALSA+EITAD V +FVAD +ES+ E L ++ K W+KIL + +
Sbjct: 663 KIMKFLREQAALSATEITADAVNNFVADLEDESDSEQLIPSTQNGDYKFNWQKILSS-NK 721
Query: 710 MSSPVRNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPM 769
+S +N +N PK+NGKHNK V +G K G + + +S + MH+ +P
Sbjct: 722 LSFANKNIDGFFPVNNVH--TPKINGKHNKTVKELGIKINGS-TIRGDSSTEFMHSGIPT 778
Query: 770 YKEVLPGLESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
KE+ L+ W++ KI++WHN EG+SIQW +VC+DR+G
Sbjct: 779 RKEIFASLDHWKSGKISSWHNTEGNSIQWLCIVCVDRKG 817
>gi|242040981|ref|XP_002467885.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
gi|241921739|gb|EER94883.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
Length = 889
Score = 1060 bits (2742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/826 (66%), Positives = 628/826 (76%), Gaps = 41/826 (4%)
Query: 5 ASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHP-----AHSSS 59
+ S S+ECV+ C G GR Y+CSVLSCAW APRALTG LAST A +
Sbjct: 10 GAASSSLECVSSCTAASWKGGGRPYECSVLSCAWNAPRALTGALASTAQCSSCGHAEAGG 69
Query: 60 LSLGPTGRRNRINSRCE-AFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRLCLSPS-- 116
R NS FD E + G P + + W + P+
Sbjct: 70 GWRRRGRSRRSNNSLLHITFD------EDINRGKFGYDPSPAYSASFVRPWSTTVDPTWR 123
Query: 117 ----VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
SS++F SPE LWEDL+P +SYL P EL VR AL LA+EAH GQKRRSGEPFI
Sbjct: 124 AYCYSSSESFI-ISPETLWEDLKPAVSYLQPEELNFVRDALKLAYEAHSGQKRRSGEPFI 182
Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
IHPVEVARILGE ELDWESIAAGLLHDTVEDT+VVTFERIE EFG TVRRIVEGETKVSK
Sbjct: 183 IHPVEVARILGEHELDWESIAAGLLHDTVEDTDVVTFERIENEFGPTVRRIVEGETKVSK 242
Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
LGKL+CK+E S QD+KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +I
Sbjct: 243 LGKLQCKSEGSSKQDLKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAI 302
Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
A ETLQVFAPLAKLLGMY+IKSELE LSFMY N +A++++RV DLYK HE+ELEEAN+
Sbjct: 303 AMETLQVFAPLAKLLGMYRIKSELEYLSFMYVNPTGFAELRKRVEDLYKAHEQELEEANR 362
Query: 353 ILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
IL +KI +DQFLDL++V+TE+RSV KE YSIYK+ LKS+ SINEVNQ+AQLRIIIKPK C
Sbjct: 363 ILRQKIVEDQFLDLVSVETEVRSVYKELYSIYKSTLKSKSSINEVNQVAQLRIIIKPKSC 422
Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+GVGPLC+ QQICYHVLGLVHGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF
Sbjct: 423 NGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFH 482
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
LEVQIRTE+MDLIAERGIAAHYSGR V+G V +GR+ +GK +CLNN ALRI W
Sbjct: 483 LEVQIRTEDMDLIAERGIAAHYSGRGVVSGPVRPGISSGRNAKGKVICLNNTGFALRIGW 542
Query: 533 LNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
LNAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLP+GATVVDYAY+IHT
Sbjct: 543 LNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPEGATVVDYAYLIHT 602
Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHK 652
EIGNKM+AAKVNGNLVSP HVLANAEVVEIITY+ LSSK AFQRH+QWL+HAKTRSARHK
Sbjct: 603 EIGNKMIAAKVNGNLVSPIHVLANAEVVEIITYDKLSSKYAFQRHQQWLQHAKTRSARHK 662
Query: 653 IMKFLREQAALSASEITADTVGDFVADSGEESEVE-DLSDGSKQDKPL-WEKIL----MN 706
IMKFLREQAALSA+EITAD V +FVAD +ES+ E L +D WEKIL +
Sbjct: 663 IMKFLREQAALSAAEITADAVNNFVADLEDESDSELSLPSTKNEDSKFNWEKILSSDKLF 722
Query: 707 VVQMSS----PVRNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKM 762
V SS PV N PK+NGK NK V +G K G + + +SF ++
Sbjct: 723 FVNKSSDGFLPVNNVH------------PKLNGKQNKTVKELGIKINGHSTIRGDSFNEL 770
Query: 763 MHANVPMYKEVLPGLESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
MH KEV PGL+ W++ KI++WH+ EG+S+QW + C++R+G
Sbjct: 771 MHPGNSTCKEVFPGLDRWKSGKISSWHSTEGNSVQWLCIACVNRKG 816
>gi|7268986|emb|CAB80719.1| putative GTP pyrophosphokinase [Arabidopsis thaliana]
Length = 816
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/814 (67%), Positives = 623/814 (76%), Gaps = 63/814 (7%)
Query: 10 SVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRN 69
SVECVNIC L KGDG+ R DCS LSCAWKAPRALTGFLAST HP S S G GR++
Sbjct: 1 SVECVNICNLTKGDGNARS-DCSALSCAWKAPRALTGFLASTAHPPVCSVYSCGRNGRKS 59
Query: 70 RINS----RCEAFDVGSWCTEGSDLVLLGKLPRSSLLHVACKRWRL-CLSPSVSSDAFKE 124
R+ + R E ++VG +E V + + +S L KRW L C+S SS A +
Sbjct: 60 RMKACAWQRYE-YEVG--FSEAPYFVNVRNILKSRLSCGGHKRWELYCVSAESSSGASSD 116
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+ E LWEDL P+ISYL ELE V++ L
Sbjct: 117 VTVETLWEDLFPSISYLPRKELEFVQKGLK------------------------------ 146
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
ELDWESI AGLLHDTVEDTN +TFE+IEEEFGATVR IVEGETKVSKLGKLKCK E+ +
Sbjct: 147 -ELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESET 205
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+QDVKADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQSSIA ETLQVFAPLA
Sbjct: 206 IQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLA 265
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
KLLGMY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL EAN+IL+KKIEDDQFL
Sbjct: 266 KLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFL 325
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQ-LRIIIKPKPCSGVGPLCSPQQ 423
DL+TV T++RSVCKE YSIYKA LKS+GSIN+ NQIAQ LRI++KPKP GVGPLCSPQQ
Sbjct: 326 DLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQ 385
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
+ KDYIATPKPNGYQSLHTT+IPFLYESMFRLEVQIRTEEMD
Sbjct: 386 V-------------------KDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMD 426
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
LIAERGIA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNAIREWQEEF
Sbjct: 427 LIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEEF 486
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
VGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAKV
Sbjct: 487 VGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKV 546
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAAL 663
NGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM+FLREQAA
Sbjct: 547 NGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQAAQ 606
Query: 664 SASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSD 723
A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S ++ +
Sbjct: 607 CAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAP 664
Query: 724 DNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQAS 783
N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVLPGL+SW+ S
Sbjct: 665 QNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDS 723
Query: 784 KIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVM 817
KIATWH+LEG SI+W VV +DR+G V V+
Sbjct: 724 KIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVL 757
>gi|326522797|dbj|BAJ88444.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/829 (65%), Positives = 636/829 (76%), Gaps = 38/829 (4%)
Query: 3 SAASMSVSVECVNICK--LPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTHPA---HS 57
++A ++S+EC + C+ G G+GR Y+CSVLSCAW APRALTG LASTT + H+
Sbjct: 5 TSALSALSLECASSCRPLWKGGGGAGRPYECSVLSCAWNAPRALTGALASTTQCSSCSHA 64
Query: 58 SSLSLGPTGRRNRINSRCEAFDVGSWCTE----------GSDLVLLGK------LPRSSL 101
++ G R R ++ + +W E + V GK P S+
Sbjct: 65 EAVGGGRWRGRPRQSNNNTLLHI-TWPEETNKGKLGHGSSASFVSSGKKIRYWSTPVKSM 123
Query: 102 LHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHD 161
V+C SS+ F SPE LWE LRP ISYL P EL V AL LA+EAH+
Sbjct: 124 WRVSC----------YSSEPFDLVSPETLWESLRPAISYLQPEELNFVHDALKLAYEAHN 173
Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
GQKRRSGEPFIIHPVEVARILGE ELDWESIAAGLLHDTVEDT++VTFE I+ EFGATV
Sbjct: 174 GQKRRSGEPFIIHPVEVARILGEHELDWESIAAGLLHDTVEDTDMVTFEAIQNEFGATVC 233
Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
RIVEGETKVSKLGKL+CKNE S QDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTL
Sbjct: 234 RIVEGETKVSKLGKLQCKNEGSSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 293
Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
+HMP HKQ +IA ETLQVFAPLAKLLGMYQIKSELE LSFMY N D+A++++RV D++K
Sbjct: 294 THMPQHKQYAIAMETLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFAELRKRVEDIFK 353
Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA 401
HE+ELEEANK L +KI +DQFLDL++V+TE+RSVCKE YSIYK LKS+ S+NEVNQ+A
Sbjct: 354 AHEQELEEANKTLKQKIAEDQFLDLVSVETEVRSVCKELYSIYKTALKSKSSLNEVNQVA 413
Query: 402 QLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT 461
QLRIIIKPK C+GVGPLC+ QQICYHVLGLVH IWTPIP+A+KDYIATPKPNGYQSLHTT
Sbjct: 414 QLRIIIKPKSCNGVGPLCTAQQICYHVLGLVHCIWTPIPQAVKDYIATPKPNGYQSLHTT 473
Query: 462 LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
+IPFL ESMF LEVQIRTE+MDLIAERGIAAHYSG V+G V +GR+ GK +CL
Sbjct: 474 VIPFLNESMFHLEVQIRTEDMDLIAERGIAAHYSGIGVVSGPVCPGISSGRNLDGKVICL 533
Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGA 581
+N ALRI WLNAIREWQEEFVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGA
Sbjct: 534 SNTGFALRIGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGA 593
Query: 582 TVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWL 641
TV+DYAY+IHTEIGNKMVAAKVNGNLVSP H LANAEVVEIITY+ LSSK AFQRH+QWL
Sbjct: 594 TVIDYAYLIHTEIGNKMVAAKVNGNLVSPIHALANAEVVEIITYDRLSSKYAFQRHQQWL 653
Query: 642 EHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQD--KPL 699
+HAKTRSARHKIMKFLREQAALSA+EITAD V +FVAD +ES+ E L ++ + K
Sbjct: 654 QHAKTRSARHKIMKFLREQAALSAAEITADAVNNFVADLEDESDSEQLIPTTQNEDYKFN 713
Query: 700 WEKILMNVVQMSSPVRNSKAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSF 759
W+KIL + ++S +NS +N PK+NGKHNK V +G K G + + S
Sbjct: 714 WQKILSS-NKLSFVNKNSDGFLPVNNVH--TPKINGKHNKTVKELGIKINGS-TVRGGSS 769
Query: 760 AKMMHANVPMYKEVLPGLESWQASKIATWHNLEGHSIQWFSVVCIDRRG 808
+ M VP KEV L++W+ KI++WHN EG+SIQW +VC+DR+G
Sbjct: 770 TEFMRPGVPACKEVFTSLDNWKCGKISSWHNTEGNSIQWLCIVCVDRKG 818
>gi|148905795|gb|ABR16061.1| unknown [Picea sitchensis]
Length = 901
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/839 (64%), Positives = 630/839 (75%), Gaps = 29/839 (3%)
Query: 1 MASAASMSVSVECVNICKLPKGDGSGRYYDCSVLSCAWKAPRALTGFLASTTH--PAHSS 58
MAS + +SVS E VN CK+ K D +G +CS+LSCAWKAPRAL+G ASTT P+ +
Sbjct: 1 MASTSFLSVSFEAVNACKVIKLD-TGSRSECSILSCAWKAPRALSGSFASTTQSRPSSAD 59
Query: 59 SLSLGPTGRRNRINSRCEAF-----DV---GSWCTEGSDLVLLGKLPRSSLLHVACKRWR 110
L + NR + +C + DV G C + D V K R L A RWR
Sbjct: 60 GDGLRKSTGTNR-SHQCARYVACSDDVPLMGESCCKFVDDVAHLKTYRLRLRTRAHMRWR 118
Query: 111 LCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEP 170
C S + S + + + LWE L+P ISYLS L LV+ AL LAFEAHDGQKRRSGEP
Sbjct: 119 ACYSSNSSPEYPDTVTVKTLWEVLKPAISYLSSAHLRLVKDALKLAFEAHDGQKRRSGEP 178
Query: 171 FIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKV 230
FIIHPVEVARILGELELDWESIAAGLLHDTVED+NVVTFERIEEEFG VRRIVEGETKV
Sbjct: 179 FIIHPVEVARILGELELDWESIAAGLLHDTVEDSNVVTFERIEEEFGPVVRRIVEGETKV 238
Query: 231 SKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS 290
SKLGKL+C + +SVQDVKA+DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ
Sbjct: 239 SKLGKLQCTDLKNSVQDVKANDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQC 298
Query: 291 SIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 350
SIA+ETL++FAPLAKLLGMYQIKSELE LSFMYTN + +A +KRRV L KE EKEL EA
Sbjct: 299 SIASETLKIFAPLAKLLGMYQIKSELETLSFMYTNPDKFADLKRRVEQLNKEQEKELSEA 358
Query: 351 NKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPK 410
+IL++KIE+DQFLD M++ E+ SVCKE YSIYK +L+ GSIN+VN+IAQLR+I+KPK
Sbjct: 359 KRILVQKIEEDQFLDFMSMDVEVLSVCKELYSIYKMLLEREGSINKVNEIAQLRVILKPK 418
Query: 411 PCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESM 470
C V PLCS QQICYH+LGLVHGIWTPIPR MKDYIATPKPNGYQSL T +IPFL ES
Sbjct: 419 QCDRVAPLCSSQQICYHILGLVHGIWTPIPREMKDYIATPKPNGYQSLQTKVIPFLNEST 478
Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
FR+EVQIRTEEMD IA+RGIA HYSG+ + G AR NGR RGK CLN+A+IA R+
Sbjct: 479 FRVEVQIRTEEMDCIAQRGIAVHYSGKGITS---GSARTNGRILRGKATCLNSADIARRV 535
Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
SWLNAIREWQEEFVGNM+SREFVDT+T DLLGSRVFVFTP+GEIKNLPKGATVVDYAY +
Sbjct: 536 SWLNAIREWQEEFVGNMSSREFVDTVTGDLLGSRVFVFTPKGEIKNLPKGATVVDYAYQV 595
Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSAR 650
HTEIGNKM+AAKVNGN VSP H LANAEVVEIITY+ LSSK+ F RH+QWL++A+TRSAR
Sbjct: 596 HTEIGNKMIAAKVNGNPVSPMHTLANAEVVEIITYDGLSSKTVFHRHQQWLQYARTRSAR 655
Query: 651 HKIMKFLREQAALSASEITADTVGDFVADSGEESEVEDLSDGSKQDKP-LWEKILMNVVQ 709
HKIMKFLREQAALSA+EITADTV +FVAD E+ + D +D + D P N+++
Sbjct: 656 HKIMKFLREQAALSAAEITADTVNNFVADL-EDVSLGDRNDVGEIDLPSSMSSTAANIMK 714
Query: 710 MSSPVRNS------KAVCSD----DNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSF 759
+ KA+ S+ N + +PK+NGK K + +G K GEL +N
Sbjct: 715 NKRTFLDGRESLMIKAMYSNLQPVRNQPVPSPKINGKPTKSISELGLKLNGELEIPKNK- 773
Query: 760 AKMMHANVPMYKE-VLPGLESWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVM 817
AK NV + VL GLE W+AS++A WH LE SIQWFSV CIDR+G V V+
Sbjct: 774 AKSSKPNVSNTNDKVLAGLEKWKASEVAHWHGLERKSIQWFSVSCIDRKGMLAEVTSVL 832
>gi|218192804|gb|EEC75231.1| hypothetical protein OsI_11504 [Oryza sativa Indica Group]
Length = 761
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/657 (71%), Positives = 533/657 (81%), Gaps = 32/657 (4%)
Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
DL+P ISYL P EL V AL LA+EAH+GQKRRSGEPFIIHPVEVARILGE ELDWESI
Sbjct: 25 DLKPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGEHELDWESI 84
Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
AAGLLHDTVEDT++VTFERIE EFG TVRRIVEGETKVSKLGKL+CKNE +S QDVKA+D
Sbjct: 85 AAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGKLQCKNEGNSKQDVKAED 144
Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
LRQMFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY+I
Sbjct: 145 LRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAMETLQVFAPLAKLLGMYRI 204
Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
KSELE LSFMY N D+A++K+RV DLYK HE+ELEEAN+IL +KI +DQFLDL++V+T+
Sbjct: 205 KSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEANQILGEKIAEDQFLDLVSVETQ 264
Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
+RSVCKE YSIYK VLKS+ SINE+NQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLGLV
Sbjct: 265 VRSVCKELYSIYKTVLKSKSSINEINQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLGLV 324
Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
HGIWTPIP+A+KDYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGIAA
Sbjct: 325 HGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGIAA 384
Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
HYSGR V+G V +GR+ GK +CLNN ALRI WLNAIREWQEEFVGNM+SREF
Sbjct: 385 HYSGRGVVSGPVRPGISSGRNSNGKVICLNNTGFALRIGWLNAIREWQEEFVGNMSSREF 444
Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
VDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAK
Sbjct: 445 VDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAK---------- 494
Query: 613 VLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADT 672
LS+K AFQRH+QWL+HAKTRSARHKIMKFLREQAALSA+EITAD
Sbjct: 495 --------------KLSAKYAFQRHQQWLQHAKTRSARHKIMKFLREQAALSAAEITADA 540
Query: 673 VGDFVADSGEESEVEDLSDGSKQDKPL---WEKILMNVVQMSSPVRNSKAVCSDDNASLW 729
V +FVAD +ES+ E S S ++K W+KIL N ++S N K+ C ++
Sbjct: 541 VNNFVADLEDESDYEQ-SIPSSENKDYTFNWQKIL-NSDKLS--FGNKKSDCFLPVKNVS 596
Query: 730 APKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKIA 786
PKVNGKHNK V +G K G + + +SF +H V KEVLP +++W+A +A
Sbjct: 597 VPKVNGKHNKTVKELGIKINGS-TFRGDSFTDFIHPGVSSSKEVLPSVDNWKAGMVA 652
>gi|168046405|ref|XP_001775664.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672937|gb|EDQ59467.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 873
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/812 (54%), Positives = 558/812 (68%), Gaps = 45/812 (5%)
Query: 30 DCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINS-RCEA-FDVGSWCTEG 87
+C+ +CAW++PR +GFLAST P S + RN++++ RC + ++ +
Sbjct: 3 ECTSSNCAWRSPRVFSGFLAST--PQSSQGECASWSKLRNKVSAHRCPVNHSIKNYVQQP 60
Query: 88 SDLVLLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELE 147
G+ R + V C C + +P LWE L+P ISYL+ +
Sbjct: 61 ------GRSGR--IREVIC-----CAGSDDLHLSSYNTTPSELWESLKPAISYLTKAQSR 107
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
+V+ L LAFEAHDGQKR+SGEP+IIHPVEVARILGELE+DWE++ AGLLHDTVEDT V
Sbjct: 108 MVKDGLKLAFEAHDGQKRKSGEPYIIHPVEVARILGELEMDWETVVAGLLHDTVEDTEHV 167
Query: 208 TFERIEEEFGATVRRIVEGETK--VSKLGKLKCKNENHSV---QDVKADDLRQMFLAMTE 262
TFERIE++FG VRRIVEGETK VSKLGK++C+N + +DVKADDLRQMFLAMTE
Sbjct: 168 TFERIEDQFGPVVRRIVEGETKATVSKLGKMQCQNSDGMSTLSRDVKADDLRQMFLAMTE 227
Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
EVRVIIVKLADRLHNMRTLSHMPPHKQ IATETLQVFAPLA+LLGMY+IKSELE LSFM
Sbjct: 228 EVRVIIVKLADRLHNMRTLSHMPPHKQKYIATETLQVFAPLARLLGMYRIKSELEELSFM 287
Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
Y E++A++K+RV L K+ E + EA K+L + I DQFL MT ++ ++ KE YS
Sbjct: 288 YAYPEEHAEIKQRVESLRKQQEDVVLEAKKVLHETISRDQFLGYMTADIKVATLSKELYS 347
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
IYK + ++ G+ ++ IAQ+R+++K KP + VG LC+ QQ+CYHVLGLVH +W P+P++
Sbjct: 348 IYKKMDQNIGA-EDIRDIAQMRLVLKLKPSASVGHLCNVQQVCYHVLGLVHAMWPPLPQS 406
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV-- 500
MKDYIATPKPNGYQSLHTT+IPF ++ F LE+QIRT+EMD +AE GIAA+YSGR
Sbjct: 407 MKDYIATPKPNGYQSLHTTVIPFGTQTYFPLEIQIRTDEMDRLAECGIAAYYSGRWMAER 466
Query: 501 --TGLVGHARPNGRSPR---------GKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
+V AR + R G + LN+A+IA R+SWL +IR+WQEEFVGNM+S
Sbjct: 467 NSDAMVPFARNEEDAARAIYPASNSLGSSSYLNDADIARRVSWLKSIRDWQEEFVGNMSS 526
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
REFVDT+T DLL SRVFVFTP+GE+KNLPKGATV+DYAY IHT++GNKMVAAKVNGNLVS
Sbjct: 527 REFVDTVTGDLLSSRVFVFTPKGEVKNLPKGATVIDYAYQIHTDVGNKMVAAKVNGNLVS 586
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEIT 669
PTH LANAEVVEI+TY+++S+K FQ H QWL++AKTRSARHK+ KFL+EQAALSA EIT
Sbjct: 587 PTHALANAEVVEILTYDSISAKRVFQLHSQWLQYAKTRSARHKLTKFLKEQAALSAEEIT 646
Query: 670 ADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDNASLW 729
ADTV +FV D + D S + + E I P + + + +
Sbjct: 647 ADTVNEFVKDLNDGQCENDPYSSSDECAAVPETIGNYFNGDYDPFSH---ISHQSDEFSF 703
Query: 730 APKVNGKHNKRVHYV--GSKAEGELSSQ--ENSFAKMMHANVPMYKEVLPGLESWQASKI 785
PK NG N + GS G L S+ EN AK +VP E +E WQ KI
Sbjct: 704 KPKTNGSANGSANGSANGSANGGHLVSKMGENGLAKSKVRHVP--DEARADIEVWQNEKI 761
Query: 786 ATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVM 817
A+WH+ EG SIQWFSV C DR V V+
Sbjct: 762 ASWHSSEGGSIQWFSVCCHDRNSMLAEVTAVL 793
>gi|168046238|ref|XP_001775581.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672999|gb|EDQ59528.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/819 (53%), Positives = 552/819 (67%), Gaps = 46/819 (5%)
Query: 30 DCSVLSCAWKAPRALTGFLASTTHPAHSSSLSLGPTGRRNRINSRCEAFDVGSWCTEGSD 89
+C+ SCAW++PR L+GFLAST P S + R+RI C + + SWC
Sbjct: 3 ECTSSSCAWRSPRTLSGFLAST--PQSSQGDCALSSRLRSRILIHC-SHCIPSWCQHIQK 59
Query: 90 LVLLGKLPRSSLLHVA--CKRWRLCLSPSVSSDAFKED--------SPERLWEDLRPTIS 139
+ ++ L + H+ K+ P V+ A E+ +P LWE L+P+IS
Sbjct: 60 VGVIQCLRKGGRGHLNKNYKQSGRSERPRVTCCAGAEELYLSDKNITPITLWESLKPSIS 119
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ +L +V+ L LAFEAHDGQKR+SGEPFIIHPVEVARILGE E+DWE+I AGLLHD
Sbjct: 120 YLTKAQLRMVKDGLKLAFEAHDGQKRKSGEPFIIHPVEVARILGEQEMDWETIVAGLLHD 179
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VTFERIE++FG VRRI++ + +VSKLGK++C+N + +DVKADDLRQMFLA
Sbjct: 180 TVEDTEHVTFERIEDQFGPAVRRILKLDVQVSKLGKMQCQNSDSLGKDVKADDLRQMFLA 239
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
MTEEVRVIIVKLADRLHNMRTLSHMPPHKQ IA ETLQVFAPLAKLLGM++IKSELE L
Sbjct: 240 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQKYIAMETLQVFAPLAKLLGMHRIKSELEEL 299
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SFM+ E++A++K RV L K E + EA K+L + I DQFL MT ++ ++ K+
Sbjct: 300 SFMFAYPEEHAELKLRVEALRKTQEDVVVEAKKVLYETISRDQFLGYMTEDIKVATLSKQ 359
Query: 380 PYSIYKAVLKSRGSINEVNQIAQ--LRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
YSIYK + + S EV IAQ LRI++K KP + VG LC+ QQ+CYHVLGLVH +W
Sbjct: 360 LYSIYKKIADQKISAEEVRDIAQVWLRIVLKLKPATSVGHLCNVQQVCYHVLGLVHAMWP 419
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P+ MKDYIATPKPNGYQSLHTT+IPF ++ F +E+QIRTEEMD +AE GIAAH+SGR
Sbjct: 420 PLPQTMKDYIATPKPNGYQSLHTTVIPFGTQTYFPIEIQIRTEEMDKLAEWGIAAHHSGR 479
Query: 498 VFV------------TGLVGHARPN-GRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
G G A N +P CLN+A+IA R+SWL +IR+WQEEFV
Sbjct: 480 WVAERESDAMGPFARKGTNGAAAGNLASNPPSSNTCLNDADIARRVSWLKSIRDWQEEFV 539
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
GNM+SREFVDT+T DLL SRVFVFTP+GE+KNLPKGATV+DYAY IHT++GNKMVAAKVN
Sbjct: 540 GNMSSREFVDTVTGDLLSSRVFVFTPKGEVKNLPKGATVIDYAYQIHTDVGNKMVAAKVN 599
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALS 664
G LVSPTH LANAEVVEI+TY+ +S+K FQ H+QWL +A TRSARHK+ KFL+EQAALS
Sbjct: 600 GILVSPTHTLANAEVVEIVTYDGVSTKKIFQLHRQWLAYAMTRSARHKLTKFLKEQAALS 659
Query: 665 ASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDD 724
A+EITAD+V +F++D E+ E+ S + N SS N +
Sbjct: 660 AAEITADSVKEFISDLDEDESEEESSSSDTC------ATISNGNGRSSSTNNGDPFLQNS 713
Query: 725 ---NASLWAPKVNGKHNKRVHYVGSKAEGELSSQ---ENSFAKMMHANVPMYKEVLPGLE 778
++ W PK +G N K G+L ++ N FAK + E ++
Sbjct: 714 YQYDSLSWKPKSHGTMNG----AAFKLAGDLVAKVAGGNGFAKYKIRYIQ--DEARASIQ 767
Query: 779 SWQASKIATWHNLEGHSIQWFSVVCIDRRGNFHSVEIVM 817
+WQ +IA+W N G +QWFSV C DR V ++
Sbjct: 768 AWQTDRIASWQNSGGGPVQWFSVCCHDRNSMLAEVSAIL 806
>gi|414866728|tpg|DAA45285.1| TPA: hypothetical protein ZEAMMB73_904820 [Zea mays]
Length = 624
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/563 (70%), Positives = 459/563 (81%), Gaps = 22/563 (3%)
Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
MFLAMTEEVRVIIVKLADRLHNMRTL+HMP HKQ +IA ETLQVFAPLAKLLGMY+IKSE
Sbjct: 1 MFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAVETLQVFAPLAKLLGMYRIKSE 60
Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
LE LSFMY N +A++++RV DLYK HE+ELEEAN+IL +KI +D+FLDL++V+TE+RS
Sbjct: 61 LEYLSFMYVNPTGFAELRKRVEDLYKSHEQELEEANRILRQKIAEDEFLDLVSVETEVRS 120
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
V KE YSIYK LKS+ SINEVNQ+AQLRIIIKPK C+GVGPLC+ QQICYHVLGLVHGI
Sbjct: 121 VYKELYSIYKTTLKSKSSINEVNQVAQLRIIIKPKSCNGVGPLCTAQQICYHVLGLVHGI 180
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
WTPIP+A++DYIATPKPNGYQSLHTT+IPFL ESMF LEVQIRTE+MDLIAERGIAAHYS
Sbjct: 181 WTPIPQAVEDYIATPKPNGYQSLHTTVIPFLNESMFHLEVQIRTEDMDLIAERGIAAHYS 240
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
GR +G VG +GR+ +GK +CLNN + ALRI WLNAIREWQEEFVGNM+SREFVDT
Sbjct: 241 GRRVASGPVGLGISSGRNAKGKVICLNNTDFALRIGWLNAIREWQEEFVGNMSSREFVDT 300
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
ITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKM+AAKVNGNLVSP HVLA
Sbjct: 301 ITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMIAAKVNGNLVSPIHVLA 360
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGD 675
NAEVVEIITY+ LSSK AFQRH+QWL+HAKTRSARHKIM+FLREQAALSA+EITAD V
Sbjct: 361 NAEVVEIITYDKLSSKYAFQRHQQWLQHAKTRSARHKIMRFLREQAALSAAEITADAVNS 420
Query: 676 FVADSGEESEVE-DLSDGSKQDKPL-WEKIL----MNVVQMSS----PVRNSKAVCSDDN 725
FVAD +ES+ E L K+D WEKIL + V SS PV N
Sbjct: 421 FVADLEDESDSELSLPSTKKEDSKFNWEKILSSDKLFFVNKSSDGFLPVNNV-------- 472
Query: 726 ASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQASKI 785
PKVNGK NK V +G K G + + +SF+++MH + KEV PGL+ W++ KI
Sbjct: 473 ----YPKVNGKQNKTVKDLGIKINGHSTIRGDSFSELMHPSNSTCKEVFPGLDDWKSGKI 528
Query: 786 ATWHNLEGHSIQWFSVVCIDRRG 808
+ WHN EG+S+QW + C+DR+G
Sbjct: 529 SGWHNTEGNSVQWLCIACVDRKG 551
>gi|302788748|ref|XP_002976143.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
gi|300156419|gb|EFJ23048.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
Length = 750
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/683 (56%), Positives = 487/683 (71%), Gaps = 21/683 (3%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
+ LR +ISYLS EL V+ AL LAF+AHDGQKRRSGEP+IIHPVEV RILGELE+DWE+
Sbjct: 1 QKLRTSISYLSQGELNRVKEALKLAFDAHDGQKRRSGEPYIIHPVEVGRILGELEMDWET 60
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAAGLLHDTVEDT+ VTFE++EEEFG VRRIVEGETKVSKLGK++ + +VQD +AD
Sbjct: 61 IAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGKIQFSDSQAAVQDAQAD 120
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
DLRQMFLAMTEEVRVI+VKLADRLHNMRTLS MP HKQ IA ETLQVFAPLA+LLG+++
Sbjct: 121 DLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALETLQVFAPLARLLGIHK 180
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IKSELE LSFMY DY +K++V +K + +A L+K ++ DQFL +
Sbjct: 181 IKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALVKSVQSDQFLSHVIDGV 240
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
I ++CK+ YSIY K + ++ E +AQ+RI+++PKP S + LCS +Q+CYHVLGL
Sbjct: 241 NIFTLCKDLYSIY----KKKKNLEEAGDVAQVRIVLQPKPDS-IDRLCSAKQVCYHVLGL 295
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W+P+P+ MKDYIATPKPNGYQSLHT +IPF ++ F LE+QIRT++MD IA+ GIA
Sbjct: 296 VHTLWSPVPQTMKDYIATPKPNGYQSLHTKVIPFGSKTFFPLEIQIRTDKMDKIAQYGIA 355
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
H+SG + +T P R ++ CLN A++A R+SWLN+IR+WQEEFVGNMTSRE
Sbjct: 356 VHFSGSIALT-------PAINGSRQQSNCLNAADLARRVSWLNSIRQWQEEFVGNMTSRE 408
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
FVDT+T DLLGSRVFVFTP+GEIKNLP+GATVVDYAY +H ++GNKMV AKVNGNLVSPT
Sbjct: 409 FVDTVTVDLLGSRVFVFTPKGEIKNLPRGATVVDYAYQLHADVGNKMVGAKVNGNLVSPT 468
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 671
HVL+NAEVVEI+TY LS+K F RHK+WL A+TRSARHK+ KFL+EQA LSA E+TAD
Sbjct: 469 HVLSNAEVVEILTYEGLSNKKQFLRHKRWLHFARTRSARHKLTKFLKEQALLSAIELTAD 528
Query: 672 TVGDFVAD-----SGEESEVEDLS-DGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDN 725
V F+++ SGE V D D + MN + S+P +K + D
Sbjct: 529 AVKKFLSNSEELTSGEGHPVTDEDRDRDRAMASFSGHFSMNDLATSNPY-AAKLLPVQDA 587
Query: 726 ASLWAPKVNGKHNKRVHYVGSKAEGE-LSSQENSFAKMMHANVPMYKEVLPGLESWQASK 784
+NGKH KR G G + S ++ + + + E W +
Sbjct: 588 MMYGGRMINGKHAKRGELAGKLGRGTCVIGSAASDSQRTYTYINNVTDASRSREDWLIGR 647
Query: 785 IATWHNLEGHSIQWFSVVCIDRR 807
+ W L G S+QWFS+ C+DRR
Sbjct: 648 LKNWQCL-GSSVQWFSICCMDRR 669
>gi|302769634|ref|XP_002968236.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
gi|300163880|gb|EFJ30490.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
Length = 750
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/683 (56%), Positives = 486/683 (71%), Gaps = 21/683 (3%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
+ LR +ISYLS EL V+ AL LAF+AHDGQKRRSGEP+IIHPVEV RILGELE+DWE+
Sbjct: 1 QKLRTSISYLSQGELNRVKEALKLAFDAHDGQKRRSGEPYIIHPVEVGRILGELEMDWET 60
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAAGLLHDTVEDT+ VTFE++EEEFG VRRIVEGETKVSKLGK++ + +VQD +AD
Sbjct: 61 IAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGKIQFSDSQAAVQDAQAD 120
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
DLRQMFLAMTEEVRVI+VKLADRLHNMRTLS MP HKQ IA ETLQVFAPLA+LLG+++
Sbjct: 121 DLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALETLQVFAPLARLLGIHK 180
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IKSELE LSFMY DY +K++V +K + +A L+K ++ DQFL +
Sbjct: 181 IKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALVKSVQSDQFLSHVIDGV 240
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
I ++CK+ YSIY K + ++ E +AQ+RI+++PK S + LCS +Q+CYHVLGL
Sbjct: 241 NIFTLCKDLYSIY----KKKKNLEEAGDVAQVRIVLQPKQDS-IDRLCSAKQVCYHVLGL 295
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W+P+P+ MKDYIATPKPNGYQSLHT +IPF ++ F LE+QIRT++MD IA+ GIA
Sbjct: 296 VHTLWSPVPQTMKDYIATPKPNGYQSLHTKVIPFGSKTFFPLEIQIRTDKMDKIAQYGIA 355
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
H+SG + +T P R ++ CLN A++A R+SWLN+IR+WQEEFVGNMTSRE
Sbjct: 356 VHFSGSIALT-------PAINGSRQQSNCLNAADLARRVSWLNSIRQWQEEFVGNMTSRE 408
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
FVDT+T DLLGSRVFVFTP+GEIKNLP+GATVVDYAY +H ++GNKMV AKVNGNLVSPT
Sbjct: 409 FVDTVTVDLLGSRVFVFTPKGEIKNLPRGATVVDYAYQLHADVGNKMVGAKVNGNLVSPT 468
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 671
HVL+NAEVVEI+TY +S+K F RHK+WL A+TRSARHK+ KFL+EQA LSA E+TAD
Sbjct: 469 HVLSNAEVVEILTYEGISNKKQFLRHKRWLHFARTRSARHKLTKFLKEQALLSAIELTAD 528
Query: 672 TVGDFVAD-----SGEESEVEDLS-DGSKQDKPLWEKILMNVVQMSSPVRNSKAVCSDDN 725
V F+++ SGE V D D + MN + S+P +K + D
Sbjct: 529 AVKKFLSNSEELTSGEGHPVTDEDKDRDRAMAGFSGHFSMNDLATSNPYA-AKLLPVQDA 587
Query: 726 ASLWAPKVNGKHNKRVHYVGSKAEGE-LSSQENSFAKMMHANVPMYKEVLPGLESWQASK 784
+NGKH KR G G + S ++ + + + E W +
Sbjct: 588 MMYGGRMINGKHAKRGELAGKLGRGTCVIGSAASDSQRTYTYINNVTDASRSREDWLIGR 647
Query: 785 IATWHNLEGHSIQWFSVVCIDRR 807
+ W L G S+QWFS+ C+DRR
Sbjct: 648 LKNWQCL-GSSVQWFSICCMDRR 669
>gi|384245520|gb|EIE19013.1| hypothetical protein COCSUDRAFT_31311 [Coccomyxa subellipsoidea
C-169]
Length = 692
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/552 (53%), Positives = 381/552 (69%), Gaps = 19/552 (3%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW L P +SYL E + V AL LA+++H+GQ R+SGE FI HPVEV RIL EL++D
Sbjct: 24 LWGRLEPLLSYLGDEEKKKVLEALHLAYDSHNGQLRKSGEAFITHPVEVTRILAELKMDH 83
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
ES+ AGLLHDTVEDT V FE IE FG VR+IVEGET+ SK+G EN S ++
Sbjct: 84 ESLIAGLLHDTVEDTENVKFEEIEFYFGKAVRQIVEGETRFSKIGSF---GENASRAELA 140
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A DL+Q+FLAMTEEVR+IIVKLADRLHNMRTL MPPHKQ IA ETL VFAPLA+LLG+
Sbjct: 141 ALDLKQLFLAMTEEVRIIIVKLADRLHNMRTLDSMPPHKQKKIADETLLVFAPLARLLGL 200
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y IK ELE LSF Y+N E++A V+RR+ L KE E + +A L +K+E D FL
Sbjct: 201 YSIKEELEALSFSYSNPEEHALVQRRLDCLAKEQEDVVLKAQSALQEKLETDTFLQERVE 260
Query: 370 KTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ + K YS+Y+ LK RG + ++ +AQLR+I+K K + Q+CYH+
Sbjct: 261 SFSVGTHQKNVYSVYRK-LKERGMDLEDLQDVAQLRVIVKLKDAHDSSLYGTGSQLCYHI 319
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
+GLVH +W PIP A+KDYIATPK NGYQSLHTT++P E +F LEVQIRT EM +AE
Sbjct: 320 MGLVHTMWAPIPGAVKDYIATPKTNGYQSLHTTVLPLGAEKLFPLEVQIRTAEMHRLAEY 379
Query: 489 GIAA--HYSGRVFVTGLVGH-----------ARPNGRSPRGKTVC-LNNANIALRISWLN 534
GIA ++ G V + H + +S R ++ LNN+ +A RI+WLN
Sbjct: 380 GIAGSLYWPGNVSLAVTAMHHIVGENWTAAKKASDFKSSRLPSLSDLNNSVMARRINWLN 439
Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
+IREWQ EFV ++++REFVD IT DLLG VFVFTP GE+ LPKGATVVD+AY +HT++
Sbjct: 440 SIREWQSEFVNSLSAREFVDCITDDLLGRGVFVFTPSGEVMRLPKGATVVDFAYHVHTDV 499
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIM 654
GN+M AKVNG +V H LANAEVVE++TY+ S+ + +RH++W+ +A+TR+ARHK+
Sbjct: 500 GNQMFGAKVNGKVVHAGHALANAEVVEVLTYDGRPSRGSIERHQEWIAYAQTRTARHKLA 559
Query: 655 KFLREQAALSAS 666
KFL++ A L S
Sbjct: 560 KFLKDHADLVDS 571
>gi|3377803|gb|AAC28176.1| T2H3.9 [Arabidopsis thaliana]
Length = 615
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/386 (70%), Positives = 310/386 (80%), Gaps = 18/386 (4%)
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ICYHVLGLVH IW PIPR +KDYIATPKPNGYQSLHTT IRTEEM
Sbjct: 238 EICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTT---------------IRTEEM 282
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
DLIAERGIA +Y+G+ TGLVG+A P GR+ RGKT CLNNA+ ALR+ WLNAIREWQEE
Sbjct: 283 DLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEE 342
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
FVGNM+SREFVDTITRDLLGSRVFVFTP+GEIKNLPKGATVVDYAY+IHTEIGNKMVAAK
Sbjct: 343 FVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAK 402
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VNGNLVSPTHVL NAEVVEI+TYNALSSKSAFQRHKQWL+HAKTRSARHKIM+FLREQAA
Sbjct: 403 VNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQAA 462
Query: 663 LSASEITADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKAVCS 722
A+EIT D V DFVADS +S+VEDL++ S++ WEKIL+NV Q S ++ +
Sbjct: 463 QCAAEITQDQVNDFVADS--DSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPA 520
Query: 723 DDNASLWAPKVNGKHNKRVHYVGSKAEGELSSQENSFAKMMHANVPMYKEVLPGLESWQA 782
N S+WAPKVNGKHNK + S E E + A+++ AN+P YKEVLPGL+SW+
Sbjct: 521 PQNGSVWAPKVNGKHNKAIKN-SSSDEPEFLLPGDGIARILPANIPAYKEVLPGLDSWRD 579
Query: 783 SKIATWHNLEGHSIQWFSVVCIDRRG 808
SKIATWH+LEG SI+W VV +DR+G
Sbjct: 580 SKIATWHHLEGQSIEWLCVVSMDRKG 605
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 178/221 (80%), Gaps = 26/221 (11%)
Query: 155 LAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEE 214
LAFEAH GQKRRSGEPFIIHPV VARILGELELDWESI AGLLHDTVEDTN +TFE+IEE
Sbjct: 18 LAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEE 77
Query: 215 EFGATVRRIVEGETKV--------------------------SKLGKLKCKNENHSVQDV 248
EFGATVR IVEGETKV SKLGKLKCK E+ ++QDV
Sbjct: 78 EFGATVRHIVEGETKVCLSVFATIFFLSYYRERTPRFLCDEVSKLGKLKCKTESETIQDV 137
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
KADDLRQMFLAMT+EVRVIIVKLADRLHNMRTL HMPPHKQ ++ ETLQVFAPLAKLLG
Sbjct: 138 KADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQVILSRETLQVFAPLAKLLG 197
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 349
MY IKSELENLSFMY +AEDY +V R+A+LYKEHEKEL E
Sbjct: 198 MYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTE 238
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 283/572 (49%), Positives = 363/572 (63%), Gaps = 40/572 (6%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
SP +LW L P I+YL P E VR AL AF AH GQ R+SGEP+I+HPV VA IL EL
Sbjct: 8 SPTQLWARLEPKIAYLPPAEQGRVRTALEFAFAAHQGQLRKSGEPYIVHPVAVAEILAEL 67
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENH 243
LD E++ AGLLHDTVEDT V E IEE FG VRRIVEGETKVSKL KL + E
Sbjct: 68 GLDAETLMAGLLHDTVEDTEVKP-EDIEERFGTAVRRIVEGETKVSKLYKLAHQVAEERP 126
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S+++ +A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL MPPHKQ+ IA ETL+++APL
Sbjct: 127 SLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQTRIARETLEIYAPL 186
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ QIK ELE+LSF Y E YA + R+ E E +E + L ++ D
Sbjct: 187 AHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLKSHRAEREAAVERGKEALEAVLQRDSV 246
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV-GPLCSPQ 422
L E+ K YSI+K + + ++ ++ + LR+I++P+P + +
Sbjct: 247 LGASIQGYEVTGRTKHLYSIWKKMQREGRALEQIYDLLALRVILEPRPTPNLEEKAMREK 306
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
Q+CYHVLGLVH +W PIP +KDYIA PKPNGYQSLHTT+I S LEVQIRT EM
Sbjct: 307 QVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAG---SGLPLEVQIRTREM 363
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
IAE GIAAH+ ++ GL + I R+ WL +I+EWQ E
Sbjct: 364 HQIAEYGIAAHW---LYKQGLT-----------------DPEEIKRRVDWLRSIQEWQAE 403
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
F +SREFVD +TRDLLG RVFVFTP+G I NLP+GA+ VD+AY IHTE+GN MV AK
Sbjct: 404 F---SSSREFVDAVTRDLLGGRVFVFTPKGRIINLPRGASPVDFAYHIHTEVGNHMVGAK 460
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VNG +V ++ L N E+VEI+T +K+A K WLE+AKTRSA+ K+ F R +
Sbjct: 461 VNGRIVPLSYELQNGEIVEILT-----AKTAHP-SKDWLEYAKTRSAKQKVRAFFRAKER 514
Query: 663 LSASEITADTVGDFVADSG----EESEVEDLS 690
E T+ + G +ES +E+++
Sbjct: 515 AETLEKGQRTLEKYFKRRGLPVPKESALEEVA 546
>gi|328951506|ref|YP_004368841.1| (p)ppGpp synthetase I SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
gi|328451830|gb|AEB12731.1| (p)ppGpp synthetase I, SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
Length = 735
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/536 (50%), Positives = 357/536 (66%), Gaps = 38/536 (7%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+P LW+ L P + YL+P + V+ AL AF AHDGQ R+SG+PFI HPV VA IL EL
Sbjct: 7 TPHTLWKHLEPKLGYLTPQQRNRVQEALEFAFTAHDGQHRKSGDPFITHPVAVAGILAEL 66
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D +++ AGLLHDTVEDT+V T + IE FG TVRRIVEGETKVSKL K+ S+
Sbjct: 67 KMDEDTLIAGLLHDTVEDTDV-TLDAIEARFGPTVRRIVEGETKVSKLPKIA-----ESI 120
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+D +A++LRQMF+AMTE+VR+IIVKLADRLHNMRTL MPP KQ I+ ETL++FAPLA
Sbjct: 121 EDEQAENLRQMFIAMTEDVRIIIVKLADRLHNMRTLEFMPPEKQQRISRETLEIFAPLAH 180
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ QIK ELE+L+F Y + E+ A ++ R++ EH+ +E A L + + D L
Sbjct: 181 RLGIGQIKWELEDLAFRYLHPEECAALEVRLSHHRAEHQAIVERAKAALEEALAKDYVLK 240
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPL-CSPQQI 424
L + + K YSI+K + + ++ ++ + LR+I+ P+P S +Q+
Sbjct: 241 LAVQEYTVTGRTKHLYSIWKKMERDGKTLEQIYDLLALRVILDPRPSSDPEEAKAREKQV 300
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CYHV+GLVH +W PIP +KDYIA PKPNGYQSLHTT+I + LEVQIRT EM
Sbjct: 301 CYHVIGLVHALWQPIPGRVKDYIAMPKPNGYQSLHTTVITW---QGMPLEVQIRTREMHR 357
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
IAE GIAAH+ ++ GL N + R+SWL AI+EWQ+EF
Sbjct: 358 IAEYGIAAHW---LYKEGLT-----------------NPEEVKRRVSWLRAIQEWQQEF- 396
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+SREFV+ +T+DLLG RVFVFTP+G+I NLPKGAT VD+AY IHTE+G+ M+ AKVN
Sbjct: 397 --SSSREFVEAVTKDLLGGRVFVFTPKGQIINLPKGATPVDFAYHIHTEVGHSMIGAKVN 454
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
G +V ++ L NA++VEIIT A + S K WL +AKTRSAR KI F REQ
Sbjct: 455 GRIVPLSYELQNADIVEIITSKASTGPS-----KDWLNYAKTRSARSKIRHFFREQ 505
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 271/533 (50%), Positives = 347/533 (65%), Gaps = 40/533 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LWE L P ++YLSP E E V+ A + A EAH GQ R+SGEP+I HPV VA IL L +D
Sbjct: 7 LWERLEPQLAYLSPAEREGVKAAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDA 66
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E++AAGLLHDTVED V E +E FG VRRIVEGETKVSKL KL N ++ +
Sbjct: 67 ETVAAGLLHDTVEDCGVAP-EELERRFGPGVRRIVEGETKVSKLYKLA----NLEGEEKR 121
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPPHKQ IA ETL+++APLA LG+
Sbjct: 122 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPHKQRRIAQETLEIYAPLAHRLGI 181
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E Y + R+ + + E+ + A IL + + D+ L
Sbjct: 182 GQLKWELEDLSFRYLHPEAYHALLSRIQETQEARERVIHRAMAILEEALRKDELLQAQLQ 241
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + G +Q+CYHV
Sbjct: 242 GFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEEGQALREKQVCYHV 301
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 302 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 358
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + RISWL +I+EWQ+EF +
Sbjct: 359 GIAAHW---LYKEGLT-----------------DPEEVKRRISWLRSIQEWQQEF---SS 395
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 396 SREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 455
Query: 609 SPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T NA SK WLE AKTRSA+ KI ++ R Q
Sbjct: 456 PLSYELQNGEIVEILTAKNAHPSKG-------WLEFAKTRSAKSKIRQYFRAQ 501
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/532 (49%), Positives = 347/532 (65%), Gaps = 38/532 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW L P ++YL+P E VR A A EAH GQ RRSGEP+I HPV VA IL L++D
Sbjct: 8 LWNRLEPALAYLAPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHDT+ED V E +E FG TVRRIVEGETKVSKL KL N ++ +
Sbjct: 68 DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E +A + R+ + E+ +++A +L + + D+ L
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQ 242
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T SK+A K WLE AKTRSA+ KI ++ R Q
Sbjct: 457 PLSYELQNGEIVEILT-----SKNAHP-SKGWLEFAKTRSAKSKIRQYFRAQ 502
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/532 (49%), Positives = 346/532 (65%), Gaps = 38/532 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW L P ++YL+P E VR A A EAH GQ RRSGEP+I HPV VA IL L++D
Sbjct: 8 LWNRLEPALAYLAPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHDT+ED V E +E FG TVRRIVEGETKVSKL KL N ++ +
Sbjct: 68 DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E +A + R+ + E+ ++ A +L + + D+ L
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQRAIHLLQETLARDELLQSQLQ 242
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T SK+A K WLE AKTRSA+ KI ++ R Q
Sbjct: 457 PLSYELQNGEIVEILT-----SKNAHP-SKGWLEFAKTRSAKSKIRQYFRAQ 502
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/532 (49%), Positives = 346/532 (65%), Gaps = 38/532 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW L P ++YL P E VR A A EAH GQ RRSGEP+I HPV VA IL L++D
Sbjct: 8 LWNRLEPALAYLPPEERAKVREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHDT+ED V E +E FG TVRRIVEGETKVSKL KL N ++ +
Sbjct: 68 DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 122
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 123 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 182
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E +A + R+ + E+ +++A +L + + D+ L
Sbjct: 183 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQ 242
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CYHV
Sbjct: 243 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 302
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 303 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 359
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 360 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 396
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 397 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 456
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T SK+A K WLE AKTRSA+ KI ++ R Q
Sbjct: 457 PLSYELQNGEIVEILT-----SKNAHP-SKGWLEFAKTRSAKSKIRQYFRAQ 502
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/532 (49%), Positives = 347/532 (65%), Gaps = 38/532 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW L P ++YL+P E V+ A A EAH GQ RRSGEP+I HPV VA IL L++D
Sbjct: 5 LWNRLEPALAYLTPEERAKVQEAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDA 64
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHDT+ED V E +E FG TVRRIVEGETKVSKL KL N ++ +
Sbjct: 65 DTVAAGLLHDTLEDCGVAP-EELERRFGPTVRRIVEGETKVSKLYKLA----NLEGEERR 119
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 120 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGM 179
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E +A + R+ + E+ +++A +L + + D+ L
Sbjct: 180 GQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLTRDELLQSQLQ 239
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CYHV
Sbjct: 240 GFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHV 299
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 300 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRVAEY 356
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 357 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQKEF---SS 393
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 394 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 453
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T SK+A K WLE AKTRSA+ KI ++ R Q
Sbjct: 454 PLSYELQNGEIVEILT-----SKNAHP-SKGWLEFAKTRSAKSKIRQYFRAQ 499
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/531 (50%), Positives = 341/531 (64%), Gaps = 40/531 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW LRP ++YLS E+ V A A AH GQ+RRSGEP+I HPV VA IL L +D
Sbjct: 13 LWSQLRPHLAYLSEEEVAQVEAAYRFAEAAHAGQRRRSGEPYITHPVAVAEILASLRMDA 72
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E++ AGLLHD VED V E +E FGA VRRIVEGETKVSKL K+ N ++ +
Sbjct: 73 ETVMAGLLHDVVEDCGVAP-EELERRFGAGVRRIVEGETKVSKLYKMA----NLEGEERR 127
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 128 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGM 187
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
QIK ELE+LSF Y + E Y + R+ + + EK +E A L + +E D+ L
Sbjct: 188 GQIKWELEDLSFRYLHPEAYQSLLERLKEGQEAREKLVERAMARLKEALEKDELLQAQIQ 247
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP-CSGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CYHV
Sbjct: 248 GFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSATEEARSLREKQVCYHV 307
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM +AE
Sbjct: 308 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHKVAEY 364
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 365 GIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKSIQEWQQEF---SS 401
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +T+DLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 402 SREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 461
Query: 609 SPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
++ L N E+VEI+T NA SK WLE AKTRSA+ KI ++ R
Sbjct: 462 PLSYELQNGEMVEILTAKNAHPSKG-------WLEFAKTRSAKSKIRQYFR 505
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/533 (49%), Positives = 341/533 (63%), Gaps = 40/533 (7%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
LW+ L + YL P + E VR A A EAH GQ R+SGEP+I HPV VA IL L +D
Sbjct: 7 LWDKLESLLDYLPPQDREKVREAYRFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDA 66
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++ AGLLHDT+ED V E +E FG VRR+VEGETKVSKL KL N ++ +
Sbjct: 67 DTVMAGLLHDTLEDCGVAP-EELERRFGPAVRRLVEGETKVSKLYKLA----NLEGEEKR 121
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMPP KQ IA ETL+++APLA LGM
Sbjct: 122 AEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGM 181
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y + E Y + R+ + + E+ + +A L + + D+ L
Sbjct: 182 GQLKWELEDLSFRYLHPEAYHALLSRIQETQEAREQIIRKAMVALEEALRRDELLQAQLQ 241
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICYHV 428
E+ K YSI+K + + ++ ++ + +R+I+ PKP + G +Q+CYHV
Sbjct: 242 GLEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEEGRALREKQVCYHV 301
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM IAE
Sbjct: 302 LGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRIAEY 358
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ ++ GL + + R+SWL +I+EWQ+EF +
Sbjct: 359 GIAAHW---LYKEGLT-----------------DPEELKRRVSWLKSIQEWQQEF---SS 395
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG +V
Sbjct: 396 SREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGRIV 455
Query: 609 SPTHVLANAEVVEIIT-YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ L N E+VEI+T NA SK WLE AKTRSA+ KI ++ R Q
Sbjct: 456 PLSYELQNGEIVEILTAKNAHPSKD-------WLEFAKTRSAKSKIRQYFRTQ 501
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/535 (49%), Positives = 345/535 (64%), Gaps = 40/535 (7%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E LWE+L ++YLSP + E V +A + A EAH GQ R+SGEP+I HPV VA IL L +
Sbjct: 5 EALWENLERVLAYLSPEDREKVHKAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRM 64
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D +++AAGLLHDT+ED V E +E FG VRRIVEGETKVSKL K N ++
Sbjct: 65 DADTVAAGLLHDTMEDCGVAG-EELERRFGPAVRRIVEGETKVSKLYKFA----NLEGEE 119
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL HMP KQ IA ETL+++APLA L
Sbjct: 120 KRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPEGKQKRIAQETLEIYAPLAHRL 179
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
GM QIK ELE+LSF Y + E Y + R+ + + E+ ++ A ++L + ++ D L
Sbjct: 180 GMGQIKWELEDLSFRYLHPEAYQALLARLQETQEARERMVKRAMEVLEEALKQDALLQSQ 239
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC-SGVGPLCSPQQICY 426
E+ K YSI+K + + ++ ++ + +R+I+ PKP + +Q+CY
Sbjct: 240 LQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSPTEEAKGLREKQVCY 299
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
HVLGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM IA
Sbjct: 300 HVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL---EGLPLEVQIRTREMHRIA 356
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ ++ GL + + R+SWL I+EWQ+EF
Sbjct: 357 EYGIAAHW---LYKEGLT-----------------DPEEVKRRVSWLKNIQEWQQEF--- 393
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
+SREFV+ +TRDLLG RVFVFTP+G I NLPKGAT VD+AY IHTE+G+ MV AKVNG
Sbjct: 394 SSSREFVEAVTRDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGR 453
Query: 607 LVSPTHVLANAEVVEIIT-YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V ++ L N ++VEI+T NA SK WLE A+TRSA+ KI ++ R Q
Sbjct: 454 IVPLSYELQNGDMVEILTAKNAHPSKD-------WLEFARTRSAKSKIRQYFRAQ 501
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/535 (48%), Positives = 351/535 (65%), Gaps = 39/535 (7%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E LW+ L P + YL+ VR AL A+ AH+GQ+R+SGEP+I+HPV VA+IL EL L
Sbjct: 21 EALWQRLEPYLHYLNDAAKAQVREALEFAYRAHEGQQRKSGEPYIVHPVAVAQILAELGL 80
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLK-CKNENHSVQ 246
D E++ AGLLHDT+EDT V E IEE FGA VR+IVEGETKVSKL KL E+ +
Sbjct: 81 DVETLLAGLLHDTIEDTEVRP-EDIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHAE 139
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
A+DLRQMF+AM E+VR+IIVKLADRLHN+RTL MPPHKQ IA ETL+++APLA
Sbjct: 140 GKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHR 199
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LG+ Q+K ELE+LSF Y + E+Y ++RR+ E E ++ A + L + + D L
Sbjct: 200 LGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAEREAAVQAAKEKLEQALARDFILKQ 259
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP---LCSPQQ 423
K E+ K +SI+K + + +I ++ + LR+I+ P+ G P +Q
Sbjct: 260 SIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPR--QGPDPEENSLREKQ 317
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
+CYHVLGLVH +W PIP +KDYIA PKPNGYQSLHTT+I + LEVQIRT EM
Sbjct: 318 VCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAV---NGLPLEVQIRTREMH 374
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+AE G+AAH+ + VT + ++ R+ WL +I++WQ+E+
Sbjct: 375 RVAEFGVAAHWLYKEGVT--------------------DPEDLRRRVGWLKSIQDWQQEY 414
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+SR+FV+ +T++LLG RVFVFTP+G+I NLPKG++ VD+AY IHTE+G+ MV AKV
Sbjct: 415 ---SSSRDFVEAVTKELLGDRVFVFTPKGKIINLPKGSSPVDFAYHIHTEVGHHMVGAKV 471
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
NG +V ++ L N E+VEI+T +K+A K W+++AKTRSA+ KI + R
Sbjct: 472 NGRIVPLSYELQNGEIVEILT-----AKTAHP-SKDWIDYAKTRSAKQKIRMYFR 520
>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
14977]
Length = 734
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/534 (47%), Positives = 338/534 (63%), Gaps = 37/534 (6%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+P LW+ L P + YL VR AL A+ AH+GQ RRSGEP+I HPV V IL EL
Sbjct: 7 TPTVLWQQLEPKLDYLPEEARVRVREALDFAYRAHEGQFRRSGEPYITHPVAVTEILAEL 66
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D +S+ AGLLHDTVED V+FE I + FG V RIVEGETKVSKL K+ SV
Sbjct: 67 QMDPDSLIAGLLHDTVEDVESVSFETIRQRFGEDVARIVEGETKVSKLSKMAT-----SV 121
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+D +A++LRQMF+AMT ++R+IIVKLADR HNMRTL MPP KQ I+ ETL++FAP+A
Sbjct: 122 EDQQAENLRQMFIAMTRDLRIIIVKLADRTHNMRTLEFMPPEKQRRISKETLEIFAPMAH 181
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ QIK ELE+L+F Y + E+YA + R+A + H + ++ A L +E+D L
Sbjct: 182 RLGIGQIKLELEDLAFRYLHPEEYAALVERLAHHSQAHREVVDNAKGALEHALENDYVLG 241
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS-PQQI 424
L + K +SI+K + + ++ ++ + LR+I+ PKP + S +Q+
Sbjct: 242 LSVDGFSVSGRTKHLFSIWKKMQREEKTLEQIYDLLALRVILDPKPVASPEEAASREKQV 301
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CYHVLGLVH +W PIP +KDYIA PKPNGYQSLHTT+I LEVQIRT EM
Sbjct: 302 CYHVLGLVHALWPPIPGRVKDYIAQPKPNGYQSLHTTVI---TPGGLPLEVQIRTREMHR 358
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+AE G+AAH+ ++ GL PN + R+ W+ ++EWQ +F
Sbjct: 359 VAEYGVAAHW---LYKEGLTD---PN--------------QLKRRVKWIELLQEWQRDFT 398
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
TSR+FV+ + DLL RVFVFTP+G + +LPKG+T VD+AY IHTE+G++M+ AKV
Sbjct: 399 ---TSRDFVEAVQHDLLSGRVFVFTPKGRVIDLPKGSTPVDFAYHIHTEVGHRMIGAKVG 455
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
G +V ++ L N ++VEI+T SKS+ K WL A +RSAR KI F R
Sbjct: 456 GKIVPLSYELRNGDIVEILT-----SKSSPGPSKDWLNFAHSRSARQKIRHFFR 504
>gi|145346824|ref|XP_001417882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578110|gb|ABO96175.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 766
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 272/597 (45%), Positives = 356/597 (59%), Gaps = 66/597 (11%)
Query: 126 SPERLWE-DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+PE LW +L + YL E VR AL +AF AHDGQ R+SGEP+I HPV VA IL E
Sbjct: 30 TPEFLWNTELARRVRYLDEFERAEVRDALEVAFNAHDGQARKSGEPYITHPVAVAAILAE 89
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH- 243
+ELD ES+ AGLLHDTVEDT+ VTFE +E+ +G VRRIVEGETKVSK+ K
Sbjct: 90 MELDHESLVAGLLHDTVEDTDAVTFESLEKRYGTAVRRIVEGETKVSKVSSSLSKESQQI 149
Query: 244 ---SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
S +DVK++DL QMFLAMTEEVR+IIVKLADRLHNMRTL + P K+ IA ETL VF
Sbjct: 150 NGTSAEDVKSEDLAQMFLAMTEEVRIIIVKLADRLHNMRTLEGLKPEKRVKIANETLLVF 209
Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
APLAKLLGMY++K+ELE+LSF Y N + YA++ RR +L K+ E ++ A L + ++
Sbjct: 210 APLAKLLGMYKVKNELEDLSFRYANPDAYAEMSRRCDELSKQQESVIQRAAVTLQETMQG 269
Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYK-----------AVLKSRGSINEVNQIAQLRIIIKP 409
D FL TV I++ KE Y +++ A+ +I+++ ++AQLR+I+
Sbjct: 270 DDFLRGNTVGVTIQAKAKELYGLHRKLSAGGRRSGSALNGDSKNIDDIFEVAQLRVILHD 329
Query: 410 KPC----SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPF 465
+G ++CYHVLG+VH +W P+P MKDYIATPK NGY++LHT ++P
Sbjct: 330 TGAMAGMTGEARRLQASRVCYHVLGIVHAMWPPVPGNMKDYIATPKLNGYKALHTVILPI 389
Query: 466 LYES-----------MFRLEVQIRTEEMDLIAERGIAAHYSGR-----------VFVTGL 503
+ +F +E+ IRTE M ++AE GIAA R +
Sbjct: 390 SPDDANPTGGIEETPVFPMEIMIRTEAMHILAENGIAADAEIRQQWRAGARRTSRALRAR 449
Query: 504 VGHARPNGRSPRGKTVCLN---------------------NANIALR-ISWLNAIREWQE 541
S G+ V L N + +LR ++WL I+ WQ+
Sbjct: 450 RRAELRYAASQEGRDVDLKALEREEALDMAAAAADKGTEENVDASLRQVAWLKNIQSWQK 509
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
EF+ +++REFVDTIT DLLG RVFVFTP+G++ NLP GATVVDYA+ E G M A
Sbjct: 510 EFIDVLSAREFVDTITSDLLGRRVFVFTPKGQVTNLPHGATVVDYAFYT-GETGMLMEYA 568
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNA-LSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
KVNG V HVL NAEVVEI L + +R ++ +A TRSAR KI K L
Sbjct: 569 KVNGVQVEFDHVLTNAEVVEIFNEGKELPAHVMLRRLRKLRLNASTRSARAKIQKQL 625
>gi|255084529|ref|XP_002508839.1| predicted protein [Micromonas sp. RCC299]
gi|226524116|gb|ACO70097.1| predicted protein [Micromonas sp. RCC299]
Length = 584
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 265/583 (45%), Positives = 350/583 (60%), Gaps = 63/583 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L++ +R + YL+ E V+ A +AF AHDGQKR+SGEPF+ HPV VA IL + +D
Sbjct: 8 LYDSIRDKLGYLTDYERSEVKDATRMAFNAHDGQKRKSGEPFVTHPVAVAGILADQRMDH 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E++ AGLLHDTVEDT+ VTFE I+E FG VRRIVEGETKVSK+ + +VQ
Sbjct: 68 ETVIAGLLHDTVEDTDAVTFESIQERFGPAVRRIVEGETKVSKVSSSQALAAAANVQ--- 124
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
ADDL++MFLAMT++VRVIIVKLADRLHNMRTL + P K+ IA ETL VFAPLAKLLGM
Sbjct: 125 ADDLKEMFLAMTQDVRVIIVKLADRLHNMRTLGALKPEKRVKIARETLLVFAPLAKLLGM 184
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y +K+ELE L+F Y E +A+ R +L K + + A + L + D+FL
Sbjct: 185 YNVKNELEELAFRYAAPETHAETARWFDELTKRQDPVVRRAAEELQALCDKDEFLKQACS 244
Query: 370 KTEIRSVCKEPYSIYKAVLKSRG--------SINEVNQIAQLRIIIKPK----------P 411
K E+ KE Y +++ ++ G ++ VN++AQLR+I+ +
Sbjct: 245 KVEVLPRAKEFYGLFR---RANGGSKPGEIDNLRRVNEVAQLRVILHLRGDDESDGEYAA 301
Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPF------ 465
S + S ++CY L +VH +W P+P MKDYIATPK NGY++LHT ++P
Sbjct: 302 MSEARRMVS-SRVCYQALSMVHALWPPVPGRMKDYIATPKLNGYRALHTVVLPIGSDQQG 360
Query: 466 --------LYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGK 517
+ +F LE+QIRT +M +AE GIAA G V A+ R R
Sbjct: 361 SAPERQGPIETEVFPLELQIRTYDMHRMAESGIAA--DGEV-KAAWRATAKRTARKLRKL 417
Query: 518 TVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNL 577
+A+ +++ WL+ IREWQEEF+G +T+ EFVDT+T DLLG RVFVFTP G + NL
Sbjct: 418 RRRAADADGDVKVEWLSNIREWQEEFLGVITAEEFVDTVTGDLLGRRVFVFTPSGGVMNL 477
Query: 578 PKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT-----YNALSS-- 630
P GATVVDYA+ +T+ G MV AKVNG V L NA+VVEIIT YN L
Sbjct: 478 PHGATVVDYAF--YTDAGLDMVEAKVNGVAVDFDTPLHNADVVEIITQAAGGYNLLDGAG 535
Query: 631 ------------KSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
K K++L+ A+TRSA++KI KFL EQ
Sbjct: 536 ESTAAALAGAVAKQKISLQKKFLDMARTRSAKYKIKKFLAEQG 578
>gi|308804597|ref|XP_003079611.1| chloroplast RelA homologue 1 (ISS) [Ostreococcus tauri]
gi|116058066|emb|CAL54269.1| chloroplast RelA homologue 1 (ISS) [Ostreococcus tauri]
Length = 798
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 273/620 (44%), Positives = 365/620 (58%), Gaps = 75/620 (12%)
Query: 113 LSPSVSSDA-----FKEDSPERLWE-DLRPTISYLSPNELELVRRALMLAFEAHDGQKRR 166
++P+ S DA ++ +PE LW +L YL E E VR AL LAF AHDGQ R+
Sbjct: 36 VAPNSSDDAELITGWEHITPEYLWNTELARRTKYLDAFEREEVRDALELAFTAHDGQARK 95
Query: 167 SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEG 226
SGEP+I HPV VA IL +LELD ES+ AGLLHDTVEDT+VVTFE +E+ +G VR+IVEG
Sbjct: 96 SGEPYITHPVAVAAILADLELDHESLIAGLLHDTVEDTDVVTFESLEKRYGVAVRKIVEG 155
Query: 227 ETKVSKLGKLKCKNENH-------------SVQDVKADDLRQMFLAMTEEVRVIIVKLAD 273
ETKVSK+ K+ S +DVK++DL QMFLAMTEEVR+IIVKLAD
Sbjct: 156 ETKVSKVSSSLSKDGAARNAPARGGPSAALSSEDVKSEDLAQMFLAMTEEVRIIIVKLAD 215
Query: 274 RLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVK 333
RLHNMRTL + K+ IA ETL VFAPLAKLLGMY IK+ELE+L+F Y + E Y+
Sbjct: 216 RLHNMRTLEGLKQEKRVKIAKETLLVFAPLAKLLGMYDIKNELEDLAFRYADPEAYSTTV 275
Query: 334 RRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSR-- 391
RR+ ++ K E ++ A + + ++ D FL V + + KEPY ++++V S
Sbjct: 276 RRLEEVSKVQEPTIKLAFERIKSEMLQDDFLRGHAVAVSLGAKQKEPYGVHRSVRNSSAK 335
Query: 392 ----GSINE--VNQIAQLRIIIKPKPC----SGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
G+ E + ++AQL+I++ S +ICYHVLG+VH +W PIP
Sbjct: 336 AGAFGANGEAAITEVAQLKIVLHDAQAVIGLSDEARRVQASRICYHVLGVVHAMWPPIPG 395
Query: 442 AMKDYIATPKPNGYQSLHTTLIPF------LYESMFRLEVQIRTEEMDLIAERGIAA--- 492
++DY+ATPK NGY++LHT ++P + ++F LEV IRTE M+++A +GIA
Sbjct: 396 ELRDYLATPKLNGYKALHTVVLPISPGASEVDAAVFPLEVIIRTEPMEMLATKGIACDDE 455
Query: 493 -----HYSGRVFVTGL-------------------VGHARPNGRSPRGKTVCLNN----- 523
R L + AR + R + V +
Sbjct: 456 LRQQWRIGARRTSLALRAQRRQEKRISLAQKGRKDIDEARLDQEEARDEEVAAADAKRPG 515
Query: 524 --ANIAL---RISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLP 578
A+ AL +++WL I+ WQ EF+ +++REFVDTIT DLLG RVFVFTP+G NLP
Sbjct: 516 GAASTALAKSQVTWLKNIQAWQTEFIDVLSAREFVDTITSDLLGRRVFVFTPKGRALNLP 575
Query: 579 KGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN-ALSSKSAFQRH 637
GATVVDYA+ G M AKVNG V HVL+NAEVVEI T N + + ++
Sbjct: 576 HGATVVDYAFYSDDTNGAHMSYAKVNGVRVDLDHVLSNAEVVEIFTDNDEIPAHMLMRKL 635
Query: 638 KQWLEHAKTRSARHKIMKFL 657
++ +A+TRSAR KI K L
Sbjct: 636 RKLRLNAETRSARAKIQKRL 655
>gi|303280445|ref|XP_003059515.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459351|gb|EEH56647.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 555
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 261/572 (45%), Positives = 339/572 (59%), Gaps = 78/572 (13%)
Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
GQ+R+SGEPF+ HPV VA IL + +D E++ AGLLHDTVEDT++VTFE I+E FGA VR
Sbjct: 22 GQRRKSGEPFVTHPVAVAGILADQRMDHETVIAGLLHDTVEDTDLVTFESIQERFGAAVR 81
Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
RIVEGETKVSK+ N V+ADDL+QMFLAMT+EVRVI+VKLADR HNMRTL
Sbjct: 82 RIVEGETKVSKVSSSTKAN-------VQADDLQQMFLAMTQEVRVIVVKLADRTHNMRTL 134
Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
+ P K+ IA ETL VFAPLAKLLGMY++K+ELE L+FM+ E +A R +L K
Sbjct: 135 WSLKPDKRRRIAQETLLVFAPLAKLLGMYKVKNELEELAFMHVAPEQHAITSRWFDELSK 194
Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSR------GSIN 395
E + A L K ++D FL + EI+ KE Y +Y+ R GS
Sbjct: 195 RQEPVVTRAAAELQKMCDEDDFLKSACERVEIQCRAKELYGVYRKAGGERIPTAPPGSDA 254
Query: 396 EVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGY 455
E + L ++ S ++CYHVLG+VH W P+P MKDYIATPK NGY
Sbjct: 255 ERESLELLSSRLRRALTS---------RLCYHVLGIVHAAWPPVPGRMKDYIATPKLNGY 305
Query: 456 QSLHTTLIPF------------LYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
++LHT + P + +F LE+QIRTE+M +AE GIAA + V
Sbjct: 306 KALHTVVQPIGGGAKRGKWGEGGGDEVFPLELQIRTEDMHRMAECGIAADKEVKAAVLIK 365
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
GH R +++WL IREWQEEF+G +T+ EFVDTIT DLLG
Sbjct: 366 SGHER--------------------QLAWLANIREWQEEFLGVLTAEEFVDTITGDLLGR 405
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
RVFVFTP G + NLP G+TVVDYAY +T++G M+AAKVNG V + L+NA+VVEII
Sbjct: 406 RVFVFTPEGGVMNLPAGSTVVDYAY--YTDVGVDMIAAKVNGVDVDADYRLSNADVVEII 463
Query: 624 -TYNA------------------LSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALS 664
T N+ +K K + + AKTRSA++KI KFL E +
Sbjct: 464 ATENSGLELFAGAGEASASAVARAVAKQKVALQKGFFDIAKTRSAKYKIQKFLAENGDVP 523
Query: 665 ASEITADTVGDFVADSGEESEVEDLSDGSKQD 696
+ TA +G V+ + SEV+ + +G++ D
Sbjct: 524 RT--TAPALG-AVSAAAPNSEVDVILNGARND 552
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/548 (44%), Positives = 337/548 (61%), Gaps = 46/548 (8%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T+S SP + + V RA A AHDG R+SGEP+I HPV VA+IL +L +D + + AGL
Sbjct: 3 TLSDRSPEDQDRVARAYHFAERAHDGVLRKSGEPYITHPVTVAQILADLGMDTDGVIAGL 62
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHDTVEDT+V TFE++E++FG VRRIVEGETKVSKL K+ ++ D ++++LRQM
Sbjct: 63 LHDTVEDTDV-TFEQVEQDFGVVVRRIVEGETKVSKLTKMSS-----NLHDEQSENLRQM 116
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AMT ++RVIIVKLADRLHNMRTL+ MP HKQ IA ETL++FAPLA LG+ QIK EL
Sbjct: 117 LIAMTGDIRVIIVKLADRLHNMRTLASMPAHKQQRIARETLEIFAPLAHRLGIGQIKWEL 176
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y + + Y ++RR+ E E+ + A + L +E+D L T+I
Sbjct: 177 EDLSFKYLDPDAYESLERRLRTRQSERERHIVGALEQLRATLEEDVELPEWVASTDITGR 236
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV-------GPLCSPQQICYHVL 429
K YSI+ + K S+ ++ + +R+I++PKP +++CYH L
Sbjct: 237 GKHLYSIHNKMRKEGKSLEQIFDLLAVRVILRPKPVEAPPGKAKERAEDAREKRVCYHAL 296
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
GLVH +WTPIP KDYIA PKPNGYQSLHTT+I + +EVQIR++ M +AE G
Sbjct: 297 GLVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTVISTAGQP---IEVQIRSQRMHEVAEFG 353
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ ++ G + + RS R +WL +R+ Q + +
Sbjct: 354 IAAHW---MYKQG----GKLDERS---------------RENWLVQLRQLQLDIT---DA 388
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
+FVD + DLL RVFVFTP+G+ NLP+G+T VD+AY IH+ IG+ V A++NG++V
Sbjct: 389 SDFVDAVKSDLLSGRVFVFTPKGDTVNLPQGSTPVDFAYHIHSRIGDTTVGARINGSIVP 448
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEIT 669
+ L N ++VEII SS+++ WL A TRSAR KI F R + A +
Sbjct: 449 LGYQLKNGDMVEII-----SSRNSSGPSHDWLNFAVTRSARAKIRHFFRAKERQEAMQSG 503
Query: 670 ADTVGDFV 677
DT+ ++
Sbjct: 504 HDTLERYL 511
>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
21211]
gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
21211]
Length = 748
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/536 (43%), Positives = 327/536 (61%), Gaps = 47/536 (8%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
EDLR + S E E + RA A +AHDG R+SGEP+I HPV VA IL EL +D ++
Sbjct: 2 EDLRRAVQERSLEEREKIERAYEFARDAHDGVLRKSGEPYITHPVAVALILAELGMDTDA 61
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHDTVEDT+V TF++IE+ FG VRRIVEGETKVSKL K + S+QD +++
Sbjct: 62 ICAGFLHDTVEDTDV-TFQQIEDHFGRDVRRIVEGETKVSKLTK-----QTTSLQDQQSE 115
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+LRQM +AMT+++R+I+VKLADRLHNMRTL M P KQ I+ ET++++APLA LG+ Q
Sbjct: 116 NLRQMLIAMTDDIRIIVVKLADRLHNMRTLGSMRPDKQQRISRETIEIYAPLAHRLGIGQ 175
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+LSF Y E YA + RR+ + E ++ A + L + + +D L
Sbjct: 176 IKWELEDLSFKYLEPEAYADLARRLRTRQDQREAHVKLALQQLREALTEDLELPEWIDNI 235
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV-------GPLCSPQQI 424
+I K YSI+ + K ++ ++ + +R+I+ PKP + +++
Sbjct: 236 DIAGRSKHLYSIHTKMRKEGKALEQIFDLLAIRVILTPKPVNAPEGKQKDRAEEVREKRV 295
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CYH LG+VH +WTPIP KDYIA PKPNGYQSLHTT+I + +EVQIR+ M
Sbjct: 296 CYHSLGIVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTVISTEGQP---IEVQIRSRRMHE 352
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+AE G+AAH+ + +G + N R W+ +++ Q E
Sbjct: 353 VAEYGVAAHWMYK-----------------QGDRLGEKN-----REGWIAQLKQLQSEIA 390
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+ +FVD + D+L RVFVFTP+G+ +LP+G++ VD+AY IH+ IG+ V A+VN
Sbjct: 391 ---DASDFVDAVKSDILSGRVFVFTPKGDTVSLPQGSSPVDFAYHIHSRIGDTTVGARVN 447
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
G++V L N ++VE+IT SK+A + + WL++AKTRSAR KI R Q
Sbjct: 448 GSIVPLGSELKNGDMVEVIT-----SKNA-KPSQDWLKYAKTRSARSKIRHHFRLQ 497
>gi|223998738|ref|XP_002289042.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
CCMP1335]
gi|220976150|gb|EED94478.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
CCMP1335]
Length = 505
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/537 (42%), Positives = 335/537 (62%), Gaps = 41/537 (7%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E W+ L PT+SYL + V++AL +A+ AH Q R+SGEPFIIHPVEVA +L +++
Sbjct: 3 ESYWDSLLPTVSYLGTSNAAKVKQALRVAYRAHRSQMRKSGEPFIIHPVEVALLLSGMKM 62
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D E++ AGLLHDTVEDT++ TFE++E FG V+ IVEGETKVSKL K+ ++ D
Sbjct: 63 DAETVMAGLLHDTVEDTDL-TFEQVEAMFGVEVKNIVEGETKVSKLPKIMGFSD---FAD 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++LRQMF+AMT++ R+IIVKLADRLHNMRTL HM P KQ I+ ETL +FAPLA +
Sbjct: 119 EQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPEKQKKISRETLDIFAPLAHRM 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G++Q KSELE+ +F Y E+Y + +R+ + L+ + ++L +++D L
Sbjct: 179 GIWQFKSELEDTAFKYLYPEEYKLLNQRLLQRRDKIINTLDNSIQVLEHTLKNDPTLRSQ 238
Query: 368 TVKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC-SPQQIC 425
V+ E+ KE YS++ K +K ++N + + LR+I+KP +G S +C
Sbjct: 239 DVEIEVVGRTKELYSLWHKMEMKHDRNLNHITDLVALRVILKPGESNGKDQGADSGVWLC 298
Query: 426 YHVLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
YHVLGLV + + P+P +KDYI+ PK NGYQSLHT L +Y+ +EVQIRT+ M
Sbjct: 299 YHVLGLVQHLPGFQPVPTKVKDYISFPKVNGYQSLHTAL---MYKGQ-SVEVQIRTQFMH 354
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+AE G+A+H++ + + ++ L N WL++I+EWQ++
Sbjct: 355 QVAEYGMASHWAYK--------------DEKKRNSMGLYNT------PWLSSIKEWQQDA 394
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
V +SR+FVD + R+LLG RVFVF G+I NL +GAT VD A+ IHTE+G +M ++
Sbjct: 395 V---SSRDFVDCVRRELLGKRVFVFLRNGKILNLARGATAVDAAFQIHTELGLQMHGVEI 451
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG V ++ L N +VV I+T ++ S +W+ AK+RS R K+ R +
Sbjct: 452 NGKPVPISYELKNGDVVSILTRDSAKPSS------EWMRFAKSRSTRSKLRAHFRSK 502
>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
11300]
gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
11300]
Length = 766
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 326/547 (59%), Gaps = 48/547 (8%)
Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
P+ E+LRP I+ E + RA + A +AH G R+SGEP+I HPV VA IL L
Sbjct: 9 PQHGMEELRPLIADRPEQERARIERAYVFARDAHAGVNRKSGEPYITHPVAVATILARLG 68
Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN--HS 244
+D +SI AGLLHDTVED + VTFE IE EFG VRRIVEGETKVSKL K + +
Sbjct: 69 MDTDSIMAGLLHDTVEDVDGVTFEVIEREFGPDVRRIVEGETKVSKLSKQGSQQAEVRDT 128
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+D++A++LRQM +AMT+++R+I+VKLADRLHNMRTL M P KQ IA ET+ +FAPLA
Sbjct: 129 GRDLQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTLGAMKPEKQQRIARETMDIFAPLA 188
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ QIK ELE+L+F Y + YA ++ R+ +E + +++A L + +EDD L
Sbjct: 189 HRLGIGQIKWELEDLAFQYLQPDAYAYLQSRLRTRQEERDALIQQAVTQLREALEDDLEL 248
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP------- 417
+I K +SI+ + + ++ ++ + +R+I+ P+P S V P
Sbjct: 249 PEWVSDIDIAGRSKHLWSIHNKMQRENKTLEQIFDLLAIRVILTPRPLS-VPPGTDEKRR 307
Query: 418 ----LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
++ICYH + +VH IWTP+P KDYIA PKPNGYQSLHTT+I +S +
Sbjct: 308 ERAEETREKRICYHTVSIVHSIWTPLPGRFKDYIAVPKPNGYQSLHTTVI---SQSGQPI 364
Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
EVQIR+ M +AE G+AAH+ + +G T+ + R +W+
Sbjct: 365 EVQIRSRRMHEVAEYGVAAHWMYK-----------------QGATLAQKD-----RENWI 402
Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
+RE Q E + +++D + D+L RV VFTP+G +LP G+T +D+AY IHT
Sbjct: 403 AQLRELQNEI---NDASDYLDAVKTDILSQRVRVFTPKGLAISLPVGSTPIDFAYHIHTR 459
Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
IG V A+VNG++V +H L N ++VEI+T SK + + WL A TRSAR KI
Sbjct: 460 IGETTVGARVNGSIVPLSHKLQNGDMVEIVTSK--HSKPS----QGWLNFAVTRSARSKI 513
Query: 654 MKFLREQ 660
R+Q
Sbjct: 514 RHHFRQQ 520
>gi|452821782|gb|EME28808.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria
sulphuraria]
Length = 776
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/553 (41%), Positives = 334/553 (60%), Gaps = 63/553 (11%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E W L ++Y S ++L +++ AL LA++AH+ QKR SG+PFI HPV VA IL EL +
Sbjct: 85 EYYWSQLETQLTYHSTSDLRVIKSALQLAYQAHELQKRHSGDPFITHPVAVANILAELRM 144
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D ++I AGLLHDTVEDT V T IE+ FG VRRIVEGETKVSKL K+ + S+ D
Sbjct: 145 DRDTIVAGLLHDTVEDTEV-TLSTIEQLFGMEVRRIVEGETKVSKLPKMA----DISI-D 198
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++LRQ+F+AMTE+ R+IIVKLADRLHNMRTL M K+ IA ETL +FAPLA L
Sbjct: 199 KQAENLRQLFIAMTEDWRIIIVKLADRLHNMRTLQFMKQAKRHKIAKETLDIFAPLAHRL 258
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
GM+QIK+ELE L FMY +Y ++++ V ++ + LEE+ + L +++D L
Sbjct: 259 GMWQIKAELERLGFMYLYPSEYEEIRQLVEKKLPKYMRVLEESRQALKTALQNDVILQQS 318
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP-----CSGVGPLCSP- 421
+ E+ + KE YS++K + + I ++ + LR++I PKP CS C+
Sbjct: 319 VAQVEVSARIKELYSLWKKMQQHGKDIEDIYDLVALRVLITPKPMQLECCSSDASQCNEW 378
Query: 422 ---------QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+ +CY+ LG+VH +W P P +KDYIA PK NGYQSLHTT++ ++
Sbjct: 379 NRKMLETLEKSLCYYTLGIVHAMWQPFPCRVKDYIAFPKENGYQSLHTTVMAGGAQA--P 436
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS- 531
LEVQIRT EM L+AE G+AAH+ + N+ IA + +
Sbjct: 437 LEVQIRTLEMHLVAEYGMAAHWMYKD-----------------------NSVVIASKATR 473
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRG-------EIKNLPKGATVV 584
W++ I EW +E SREFV+ + R+LLGSRVFVF EI NLP+G+T+V
Sbjct: 474 WMSTIVEWGDEIAN---SREFVELVRRELLGSRVFVFAKFESYSDRCLEIFNLPRGSTIV 530
Query: 585 DYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHA 644
D A+ + + +G +M A+V+G +V ++L NA+VV I + S+ + +W+++A
Sbjct: 531 DIAFQLDSCLGLRMTCARVHGKIVPFWYILENADVVTI------ACNSSAEPQIEWMDYA 584
Query: 645 KTRSARHKIMKFL 657
KTR A+ + +
Sbjct: 585 KTRIAKRNLRLYF 597
>gi|219115159|ref|XP_002178375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410110|gb|EEC50040.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 511
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/542 (42%), Positives = 330/542 (60%), Gaps = 48/542 (8%)
Query: 136 PTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAG 195
PT+SYL + + + +AL +A+ AH GQ R+SGEPFI+HPVEV+ +L L++D E++ +G
Sbjct: 2 PTVSYLGTDAVAKIYQALCVAYRAHRGQMRKSGEPFIVHPVEVSLLLSGLKMDAETVMSG 61
Query: 196 LLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQ 255
LLHDTVEDT++ TF+++E FG TVR IVEGETKVSKL KL D +A++LRQ
Sbjct: 62 LLHDTVEDTDL-TFQQVETLFGHTVRSIVEGETKVSKLPKLAFAE----YADEQAENLRQ 116
Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
MF+AMT + R+IIVKLADRLHNMRTL +M KQ I+ ETL +FAPLA +G++Q KSE
Sbjct: 117 MFVAMTSDYRIIIVKLADRLHNMRTLRYMKSEKQIKISRETLDIFAPLAHRMGIWQFKSE 176
Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
LE+ SFMY ++Y ++ RR+ + ++ LE+A IL +++ D L K E+
Sbjct: 177 LEDTSFMYLYPQEYKRLNRRLRLHQQSFQETLEKAQDILQRQLNLDSTLQQQAYKVEVSG 236
Query: 376 VCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCS---GVGPLCSPQQ----ICYH 427
KE YS++ K K+ +++ + + LR++I P+ S L + +CYH
Sbjct: 237 RTKEIYSLWHKMETKNVQNLDHIVDVVALRVVISPRDKSVEADKSELSNDSDRGVWLCYH 296
Query: 428 VLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
LGLV + + P+P +KDYI+ PKPNGYQSLHT LI + +EVQIRT M +
Sbjct: 297 ALGLVQHLPGFVPVPTRVKDYISFPKPNGYQSLHTALIL----NGQTIEVQIRTSMMHQV 352
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE G+A+H++ RG L + WL++I+EWQ E V
Sbjct: 353 AEYGMASHWA-------------YTDDKRRGSNEELYST------PWLSSIKEWQNEAV- 392
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+SR+FVD++ R+LLG RVFVF G+I NL +GAT +D A+ IHTE+G M ++NG
Sbjct: 393 --SSRDFVDSVRRELLGKRVFVFLRNGKILNLARGATAIDAAFQIHTEVGLSMHGVEING 450
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
V ++ L N +VV I+T + + W+ +AK+RS R K+ + R++ S
Sbjct: 451 KPVPLSYELQNGDVVSILTGSGRPATD-------WMRYAKSRSTRSKLRSYFRDRQKESL 503
Query: 666 SE 667
E
Sbjct: 504 RE 505
>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
Length = 764
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/546 (43%), Positives = 324/546 (59%), Gaps = 46/546 (8%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E LR ++ E +L+ RA A EAH G R+SGE +I HPV VA IL EL +D S
Sbjct: 9 EHLRGLVAERPEAERDLIERAYDFAREAHAGVVRKSGEEYITHPVAVATILAELGMDTTS 68
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS--VQDVK 249
IAAGLLHDTVED + VTFE I +FG V RIVEGETKVSKL K + S +D++
Sbjct: 69 IAAGLLHDTVEDVDGVTFEVITAQFGPEVSRIVEGETKVSKLSKAGSQTAEVSDDGRDMQ 128
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LRQM +AMT+++R+I+VKLADRLHNMRT+ MPP KQ I+ ET++VFAPLA LG+
Sbjct: 129 AENLRQMLIAMTDDLRIIVVKLADRLHNMRTMDAMPPEKQKRISRETMEVFAPLAHRLGI 188
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Q+K ELE+LSF Y E+YA+++ R+ E + +++A + L +EDD L
Sbjct: 189 GQVKWELEDLSFRYLYPEEYAELRSRLRMQLDERDGIVKQAEESLRSALEDDLELPDWVA 248
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC---SGVGP-------LC 419
+I K +SI+ + + ++ ++ + LR+I+ P+ G P
Sbjct: 249 AIDISGRSKHLWSIFGKMRREGKALEQIFDLMALRVILTPRRVEAREGTDPERLARAEEM 308
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
++ICYH + +VH +WTP+P KDYIA PKPNGYQSLHTT+I +S +E+QIR+
Sbjct: 309 REKRICYHTISIVHSLWTPLPGRFKDYIAVPKPNGYQSLHTTVIG---KSGQPIEIQIRS 365
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
M +AE G+AAH+ ++ G N R W++ +RE
Sbjct: 366 SRMHEVAEYGVAAHW---MYKQG-------------------GQLNQRERDQWIDQLREL 403
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q E VG+ T E++DT+ D L RV VFTP+G +L G+T VD+AY IHT IG MV
Sbjct: 404 QNE-VGDAT--EYMDTVKNDFLSQRVRVFTPKGLAISLTAGSTPVDFAYHIHTRIGETMV 460
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
A+VNG +V + L N ++VEI+T SK+ + K WL A TRSAR KI F R+
Sbjct: 461 GARVNGKIVPLSQKLQNGDMVEILT-----SKNG-KPSKDWLNFAGTRSARTKIRYFFRQ 514
Query: 660 QAALSA 665
L A
Sbjct: 515 DERLGA 520
>gi|6647734|sp|O52177.1|RELA_MYXXA RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2736190|gb|AAB97677.1| (p)ppGpp synthetase [Myxococcus xanthus]
Length = 757
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/541 (40%), Positives = 327/541 (60%), Gaps = 66/541 (12%)
Query: 124 EDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
+DSPER PT+S P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA IL
Sbjct: 19 DDSPERH----PPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGIL 74
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
GEL+LD SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + +
Sbjct: 75 GELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASAS 129
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++AP
Sbjct: 130 LSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAP 189
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 190 LANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE-- 247
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
+K E+ K YSIYK + KS+G ++++ I RII P
Sbjct: 248 ----RGLKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS--------- 293
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
CY LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT E
Sbjct: 294 ---CYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSE 347
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M IAE GIAAH+ + GK V + + +WL + EWQ+
Sbjct: 348 MHKIAEEGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQ 387
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
+ +EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V A
Sbjct: 388 DL---KDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGA 444
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLRE 659
KVNG +V + + N + VE++T + Q+H K WL KT A+ +I F+++
Sbjct: 445 KVNGKIVPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQ 496
Query: 660 Q 660
Q
Sbjct: 497 Q 497
>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
pyrophosphokinase) [Deinococcus deserti VCD115]
Length = 760
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/541 (41%), Positives = 322/541 (59%), Gaps = 48/541 (8%)
Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
+LR + ++ + + A A +AH+G R+SGEP+I HPV VA IL L +D ES+
Sbjct: 3 ELRALVGGRLQSDRDRIELAYEFARDAHEGVNRKSGEPYITHPVAVAVILARLGMDTESV 62
Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN--HSVQDVKA 250
AGLLHDTVED VTFE IEE FG VRRIVEGETKVSKL K + H+ +D++A
Sbjct: 63 MAGLLHDTVEDVEGVTFESIEELFGPDVRRIVEGETKVSKLSKQGSQQAEVAHTGRDMQA 122
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LRQM +AMT ++R+I+VKLADRLHNMRTL M P KQ IA ET+++FAPLA LG+
Sbjct: 123 ENLRQMLIAMTADIRIIVVKLADRLHNMRTLGSMKPEKQQRIARETMEIFAPLAHRLGIG 182
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+IK ELE+LSF Y +DYA ++ R+ +E + ++ A K L + +EDD L +
Sbjct: 183 KIKWELEDLSFQYLQPDDYAYLQSRLRTRQEERDALIQGAVKQLREALEDDLELPEWVGE 242
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP-----------LC 419
+I K +SI+ + + ++ ++ + +R+I+ PK V P
Sbjct: 243 IDIAGRSKHLWSIHTKMKREGKALEQIFDLLAIRVILTPKDLI-VPPGTDEKRRERAEET 301
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRT 479
++ICYH + +VH +WTP+P KDYIA PKPNGYQSLHTT+I +S +EVQIR+
Sbjct: 302 REKRICYHTVSIVHSMWTPLPGRFKDYIAVPKPNGYQSLHTTVIS---QSGQPIEVQIRS 358
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
M +AE G+AAH+ ++ G AR R +W++ ++E
Sbjct: 359 RRMHEVAEYGVAAHW---MYKQGAQLAARD-------------------RENWISQLKEL 396
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q E + +++D + D+L RV VFTP+G +LP G+T +D+AY IHT IG V
Sbjct: 397 QNEI---NDASDYMDAVKSDILSQRVRVFTPKGLAISLPAGSTSIDFAYHIHTRIGETTV 453
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
++VNG++V +H L N ++VEI+T SK+ + K WL A TRSAR KI R
Sbjct: 454 GSRVNGSIVPLSHHLKNGDMVEIVT-----SKNG-KPSKDWLNFAVTRSARAKIRHHFRT 507
Query: 660 Q 660
Q
Sbjct: 508 Q 508
>gi|403237624|ref|ZP_10916210.1| GTP pyrophosphokinase [Bacillus sp. 10403023]
Length = 729
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/535 (40%), Positives = 330/535 (61%), Gaps = 58/535 (10%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE++ E+ + YL+ N++E ++RA A EAH Q R+SGEP+IIHPV+VA IL +L
Sbjct: 8 TPEQVIENAK---KYLNDNDIEFIKRAYKFAEEAHKEQFRKSGEPYIIHPVQVAGILVDL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
E+D +IA G LHD VEDTNV T + I + F + V +V+G V+KLGK+K K S
Sbjct: 65 EMDPSTIAGGFLHDVVEDTNV-TLQEISDAFSSEVAMLVDG---VTKLGKIKYK----SK 116
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+PP KQ I+ ETL++FAPLA
Sbjct: 117 EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAH 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +IK ELE+ + Y N + Y R+ +L K+ E EE + ++K+++D +D
Sbjct: 177 RLGISRIKWELEDTALRYLNPQQYY----RIVNLMKKKRAEREEYLEEVIKEVKDR--VD 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+++K +I K YSIY+ ++ NE+ + +RI++ + + C
Sbjct: 231 EVSIKADISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIVV------------NSIKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG++H W P+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM I
Sbjct: 279 YAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHQI 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + GK V ++ +++W I EWQ +
Sbjct: 336 AEYGIAAHWAYK-----------------EGKQVN-QQSSFEEKLTWFREILEWQNDATN 377
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ EF++++ DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG
Sbjct: 378 ---AEEFMESLKIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNG 434
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V+ + L +++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 435 KMVTLDYTLKTGDIIEILT-----SKHSYGPSQDWVKLAQTSQAKNKIRQFFKKQ 484
>gi|297623247|ref|YP_003704681.1| (p)ppGpp synthetase I SpoT/RelA [Truepera radiovictrix DSM 17093]
gi|297164427|gb|ADI14138.1| (p)ppGpp synthetase I, SpoT/RelA [Truepera radiovictrix DSM 17093]
Length = 729
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 318/540 (58%), Gaps = 53/540 (9%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D+P+ L + SYLS + A LA AH G RRSGEP+I HPV V +L E
Sbjct: 2 DAPQSLLD----KTSYLSDAARARLCEAYALAEAAHRGVTRRSGEPYITHPVAVTELLAE 57
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
+ LD +++ AGLLHDTVEDT+V TFE IE FGA VRRIVEGETK+SKL K +
Sbjct: 58 MHLDVDALIAGLLHDTVEDTDV-TFEEIEARFGAPVRRIVEGETKISKL---KIRQLEAG 113
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++ +A++LRQM LAM +VR+I+VKLADRLHNMRTL HMPP KQ IA ETL++FAPLA
Sbjct: 114 AEEEQAENLRQMLLAMVGDVRIILVKLADRLHNMRTLRHMPPEKQRRIARETLEIFAPLA 173
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ IKSELE L F Y E Y ++R+V E E ++ + +L +++ +
Sbjct: 174 HRLGINHIKSELEELGFFYLEPERYRALQRQVRMRRAEREAYVQRSIALLEERLAQE--- 230
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ- 423
+ EI K YS+Y+ + + +++++ + +R I+ P +G G ++
Sbjct: 231 ---GLTFEISGRSKGLYSVYRKMQRDAKNLDQIFDLMAIRAILTP---TGGGESVEDEEK 284
Query: 424 -ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
ICY LG++H IWTPIP KDY+A PKPNGYQSLHTT+I + +EVQIRT M
Sbjct: 285 AICYRALGIIHSIWTPIPGRFKDYVAVPKPNGYQSLHTTVIGLQGQP---IEVQIRTRRM 341
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
IAE G+AAH++ + G P + + R++W+ + +
Sbjct: 342 HEIAEYGVAAHWAYK------QGFGDP--------------SQLQARLTWMKQLLD---- 377
Query: 543 FVGNM--TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
V N ++ F+DT+ D L RV VFTP G++ NLP G+T +D+AY +HTE+G++ +
Sbjct: 378 -VNNTAESAGAFIDTVKSDFLSERVLVFTPAGDVVNLPLGSTPIDFAYHVHTEVGHRCIG 436
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
A+VNG +V ++ L + VEI+T + + + WL A TR A+ KI + R+Q
Sbjct: 437 ARVNGEIVPLSYALQTGDRVEILT----NRGAQYGPSPDWLSIAVTRGAKQKIRHYFRQQ 492
>gi|405375362|ref|ZP_11029395.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chondromyces apiculatus DSM 436]
gi|397086374|gb|EJJ17492.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 740
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/535 (40%), Positives = 321/535 (60%), Gaps = 61/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ Y +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD
Sbjct: 3 RLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +++ + ++ KE EK +EE ++ K+ +
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALSEKLNKRKKEREKYIEETCDVIRSKLAE------RG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E+ K YSIYK + KS+G ++++ I RII P CY
Sbjct: 232 LKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYE 278
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRTEEM IAE
Sbjct: 279 ALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTEEMHKIAE 335
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + GK V + + +WL + EWQ++
Sbjct: 336 EGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---K 372
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKI 432
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V + + N + VE++T + Q+H K WL KT A+ +I F+++Q
Sbjct: 433 VPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQQ 479
>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
Length = 723
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/524 (41%), Positives = 320/524 (61%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ +E+VR A A +AH+GQKR+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 10 TKQYLNDEHVEMVRHACAFASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 69
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+V T + + EEF V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 70 LHDVVEDTDV-TLDELREEFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 121
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+PP KQ IA ETL++FAPLA LG+ IK EL
Sbjct: 122 FVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWEL 181
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ S Y N + Y R+ +L K E E+ + +++++++ L + +K+EI
Sbjct: 182 EDTSLRYLNPQQYY----RIVNLMKRKRAEREQYLQNVIEEVKER--LADIRIKSEISGR 235
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ +++ NE+ + +RII+K + CY VLG++H W
Sbjct: 236 PKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSI------------KDCYAVLGVIHTCW 283
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE G+AAH++
Sbjct: 284 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRIAEYGVAAHWAY 340
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKTV + ++SW I E+Q + + EF++++
Sbjct: 341 K-----------------EGKTVN-EKTSFEKKLSWFREILEFQND---TNNAEEFMESL 379
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 380 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYQLKT 439
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK ++ W+ A+T A++KI +F + Q
Sbjct: 440 GDIVEILT-----SKHSYGPSLDWVNLAQTSQAKNKIRQFFKRQ 478
>gi|397569561|gb|EJK46819.1| hypothetical protein THAOC_34498 [Thalassiosira oceanica]
Length = 989
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/529 (42%), Positives = 320/529 (60%), Gaps = 49/529 (9%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E W+ L PT+SYL +++AL +A+ AH QKR+SGEP+IIHPVEVA +L +++
Sbjct: 259 EGYWDQLLPTVSYLGTENAAKIKKALRVAYCAHRPQKRKSGEPYIIHPVEVALLLSGMKM 318
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D +++ AGLLHDTVEDT++ TFE+IE FG V+ IVEGETKVSKL KL + D
Sbjct: 319 DADTVMAGLLHDTVEDTDL-TFEQIEAMFGTEVKNIVEGETKVSKLPKLAFAD----YAD 373
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++LRQMF+AMT++ R+IIVKLADRLHNMRTL HM P KQ I+ ETL +FAPLA +
Sbjct: 374 EQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPAKQQKISRETLDIFAPLAHRM 433
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G++ KSELE+ +FMY ++Y ++ +R+ K+ E+ L L K ++ D +
Sbjct: 434 GLWPFKSELEDTAFMYLYPDEYTRLNQRLRLRQKKFEETLTNTVNALEKTLQSDPTIQSQ 493
Query: 368 TVKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG----PLCSPQ 422
V+ E+ KE YS++ K +K +++ + + LR+I+ P+ S G P S
Sbjct: 494 DVEIEVVGRTKELYSLWHKMEMKHDRNLDHITDLVALRVILTPRGKSKGGADGDPADSGT 553
Query: 423 QICYHVLGLVHGI--WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
+CYHVLGLV + + P+P +KDYI+ PKPNGYQSLHT L+ S +EVQIRT
Sbjct: 554 WLCYHVLGLVQHLPGFQPMPTKVKDYISFPKPNGYQSLHTALM----YSGQSIEVQIRTA 609
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
M +AE G+A+H++ + + +N WL++I+EWQ
Sbjct: 610 YMHQVAEYGMASHFAYK-------------------DEMKRKESNELYNTPWLSSIKEWQ 650
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
++ V SR+FVD+I +LLG RVFVF G+I NL KGAT VD A+ IHTE+G M
Sbjct: 651 QDKV---CSRDFVDSIREELLGRRVFVFLRNGKILNLSKGATAVDAAFSIHTEVGLGMHG 707
Query: 601 AKVNGNLVSPTHVLANA------EVVEIITYNALSSKSAFQRHKQWLEH 643
++NG P L +A +V E+ + L KS + ++ L H
Sbjct: 708 VEINGK---PNSYLVDACTEVPCDVDELAAF--LPGKSHYTDPEELLFH 751
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/520 (41%), Positives = 312/520 (60%), Gaps = 60/520 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +L+L+R A + + + H GQ RRSGEP+++HPV V+ IL +++LD S+A GLLH
Sbjct: 35 SYYPDADLDLIRAAYVYSAQVHLGQTRRSGEPYLVHPVAVSMILAQMKLDEASVATGLLH 94
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT + T E IE FG + +V+G TK+SK+ E S ++ +A++ R+M L
Sbjct: 95 DTVEDT-LATLEEIERFFGKEIAALVDGVTKISKI-------EFQSKEERQAENFRKMIL 146
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM+ ++RV++VKLADRLHNMRTL MPP Q IA ETL ++APLA LG+Y +++ELE+
Sbjct: 147 AMSRDIRVLMVKLADRLHNMRTLGPMPPDAQVRIARETLDIYAPLAARLGIYWMRTELED 206
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N E Y+ + RR+ + K+ E+ +I+ +KIE +K I+ K
Sbjct: 207 LAFRYVNPERYSTIARRLEESLKQREEYANNVLRIITEKIEQ------YNIKGTIKGRNK 260
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
E +SI++ ++ ++++ + RII+ + V CY VLGL+H +W P
Sbjct: 261 EIFSIHQKMITQHLDFDQIHDLTAFRIIL-----NNVSE-------CYAVLGLIHSLWRP 308
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQSLHTT+I R+E+QIR+ EMDLIAE GIAAH+S +
Sbjct: 309 VPGRFKDYIAMPKSNGYQSLHTTVIG---PEGLRIEIQIRSTEMDLIAEEGIAAHWSYK- 364
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GR P A A ++WL + EWQ++ REF + +
Sbjct: 365 -----------EGRIP--------EAEDAKVVNWLRQMMEWQQDL---DDPREFFENVRV 402
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+GE++ PKGAT +D+AY IHTE+G++ V A++NG +VS + L +
Sbjct: 403 DLYPDEVYVFTPKGEVREFPKGATPLDFAYAIHTEVGHRCVGARINGKMVSLKYQLRTGD 462
Query: 619 VVEIITYNALSSKSAFQR-HKQWLEHAKTRSARHKIMKFL 657
VEIIT S Q+ K WL+ KT A+ KI ++
Sbjct: 463 SVEIIT-------SVHQKPSKDWLKFVKTGRAKTKIRHYV 495
>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/524 (41%), Positives = 320/524 (61%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ +E+VR A A +AH+GQKR+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 16 TKQYLNDEHVEMVRHACAFASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+V T + + EEF V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTDV-TLDELREEFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+PP KQ IA ETL++FAPLA LG+ IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ S Y N + Y R+ +L K E E+ + +++++++ L + +K+EI
Sbjct: 188 EDTSLRYLNPQQYY----RIVNLMKRKRAEREQYLQNVIEEVKER--LADIHIKSEISGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ +++ NE+ + +RII+K + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSI------------KDCYAVLGVIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE G+AAH++
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRIAEYGVAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKTV + ++SW I E+Q + + EF++++
Sbjct: 347 K-----------------EGKTVN-EKTSFEKKLSWFREILEFQND---TNNAEEFMESL 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYQLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK ++ W+ A+T A++KI +F + Q
Sbjct: 446 GDIVEILT-----SKHSYGPSLDWVNLAQTSQAKNKIRQFFKRQ 484
>gi|338534399|ref|YP_004667733.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
gi|337260495|gb|AEI66655.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
Length = 740
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/535 (40%), Positives = 321/535 (60%), Gaps = 61/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ Y +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD
Sbjct: 3 RLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALQEKLNKRKKEREKYIEDTCDVIRSKLAE------RG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E+ K YSIYK + KS+G ++++ I RII P CY
Sbjct: 232 LKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYE 278
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT EM IAE
Sbjct: 279 ALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTAEMHKIAE 335
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + GK V + + +WL + EWQ++
Sbjct: 336 EGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---K 372
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKI 432
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V + + N + VE++T + Q+H K WL KT A+ +I F+++Q
Sbjct: 433 VPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQQ 479
>gi|108762300|ref|YP_631405.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
gi|108466180|gb|ABF91365.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
Length = 753
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/535 (40%), Positives = 321/535 (60%), Gaps = 61/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ Y +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD
Sbjct: 17 RLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLD 76
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + + S ++
Sbjct: 77 EASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASASLSQEEK 131
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG
Sbjct: 132 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 191
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 192 ISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE------RG 245
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E+ K YSIYK + KS+G ++++ I RII P CY
Sbjct: 246 LKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS------------CYE 292
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT EM IAE
Sbjct: 293 ALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSEMHKIAE 349
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + GK V + + +WL + EWQ++
Sbjct: 350 EGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---K 386
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +
Sbjct: 387 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKI 446
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V + + N + VE++T + Q+H K WL KT A+ +I F+++Q
Sbjct: 447 VPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQQ 493
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 315/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++++ + RA A EAH Q R+SGEP+IIHP++VA IL +LE+D +IAAG LHD
Sbjct: 19 YLSKDDVQFIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E +E EFG V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VVEDTHV-TKEDLEREFGKEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y ++ + E E+ LEE + + ++++ + ++ EI K
Sbjct: 191 ALRYLNPQQYYRIVNLMKKKRAEREQYLEEVIQEMRARLQE------VGIQAEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII++ + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRIIVESI------------KDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT++ E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVVGPKGEP---LEVQIRTFEMHHIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N +++W I EWQ E + EFV+T+ D
Sbjct: 348 ---------------EGKTIRPN--TFEEKLAWFREIVEWQNE---TNNAEEFVETLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V H L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDHPLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T N ++ + WL+ A+T A++KI +F ++Q
Sbjct: 448 VEILTSN-----HSYGPSQDWLKIAQTSHAKNKIRQFFKKQ 483
>gi|386856222|ref|YP_006260399.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
gi|379999751|gb|AFD24941.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
Length = 753
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 231/532 (43%), Positives = 316/532 (59%), Gaps = 51/532 (9%)
Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
+ A A +AH G R+SGEP+I HPV VA IL +L +D +S+ AGLLHDTVED VT
Sbjct: 19 IEEAFEFARDAHAGVNRKSGEPYITHPVAVAVILAKLGMDSDSLMAGLLHDTVEDVEGVT 78
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKL--KCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
F IE FGA VRRIVEGETKVSKL K + + + +DV+A++LRQM +AMT ++R+
Sbjct: 79 FAGIEALFGADVRRIVEGETKVSKLSKQGSQAAQVSDTGRDVQAENLRQMLVAMTADIRI 138
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I+VKLADRLHNMRTL M P KQ+ IA ET+++FAPLA LG+ QIK ELE+LSF Y N
Sbjct: 139 IVVKLADRLHNMRTLGSMKPEKQARIARETMEIFAPLAHRLGIGQIKWELEDLSFRYLNP 198
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+ Y + R+ +E E + EA L + ++DD L +I K +SI+
Sbjct: 199 DAYEYLSTRLRTRQEEREALIAEAVAQLREGLDDDLELHEWVSGIDIAGRSKHLWSIHNK 258
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGP-----------LCSPQQICYHVLGLVHGI 435
+ K + ++ + +R+I++P+ V P ++ICYH + +VH +
Sbjct: 259 MQKEGKGLEQIFDLLAIRVILRPRDLV-VPPGTDEKRRERAEETREKRICYHTVSVVHSM 317
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
WTP+P KDYIA PKPNGYQSLHTT+I +S +EVQIR+ M +AE G+AAH+
Sbjct: 318 WTPLPGRFKDYIAVPKPNGYQSLHTTVI---SQSGQPIEVQIRSLRMHEVAEYGVAAHW- 373
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
++ G G A+ + R SWL +RE Q E N S +++D
Sbjct: 374 --MYKQG-AGLAQKD------------------RESWLAQLRELQNEI--NDAS-DYLDA 409
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D+L RV VFTP+G +LP G+T VD+AY IH+ IG V A+VNG++V H L
Sbjct: 410 VKTDILSQRVRVFTPKGLAVSLPAGSTPVDFAYHIHSRIGETTVGARVNGSIVPLAHHLG 469
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR---EQAALS 664
N ++VEI+T SK+ + K WL A TRSAR KI R +AAL+
Sbjct: 470 NGDMVEIVT-----SKNG-KPSKDWLNFAVTRSARAKIRHHFRTEEREAALA 515
>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
Length = 733
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/561 (40%), Positives = 343/561 (61%), Gaps = 61/561 (10%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
ED+ + ++++ SY +LE + A +A++ H+GQKR+SGEP+IIHP VA+IL
Sbjct: 2 EDAKTKFLKEIKAIKSY----DLEKLGEAYDVAYKQHNGQKRKSGEPYIIHPEAVAKILA 57
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
EL +D +++ AGLLHD +EDT+ T E +EE+FG+ VR +VEG V+KLG L + +
Sbjct: 58 ELGMDEDTLIAGLLHDVIEDTDF-TPEMVEEKFGSDVRHLVEG---VTKLGTLVFETK-- 111
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
++V+A+++R+MFLAM++++RV+I+KLADRLHN+RT+++M K ETL ++APL
Sbjct: 112 --EEVQAENMRKMFLAMSKDIRVLIIKLADRLHNLRTINYMSQDKIKLKCQETLDIYAPL 169
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+Y IK ELE+++ + E Y ++K+ V E + E E+A K ++ ++E +
Sbjct: 170 ASRLGIYSIKFELEDIALKCLHPETYEELKKNV----NEKKTEREKAIKDVISEVE--RA 223
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
L + ++ I K YSIYK + + S++E+ + +RII+ K
Sbjct: 224 LKPLGIEYTIYGRSKHFYSIYKKMQHQKKSLDEIFDLTAIRIIVNEKSD----------- 272
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEM 482
CY VLG+VH IWTPIP KDYIA PK N YQS+HTT+I S+ R EVQIRT++M
Sbjct: 273 -CYAVLGVVHNIWTPIPGRFKDYIAMPKMNMYQSIHTTVIG----SIGRPFEVQIRTKKM 327
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
+AE GIAAH+ + GK+ A+ ++++WL EWQ++
Sbjct: 328 HELAEYGIAAHW-----------------KYKEGKSSASEEAD-DIKLAWLRQTLEWQKD 369
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
V S+EF+DT+ DL +VFVFTP+G++ LP GAT +D+A+ IHT+IG K V AK
Sbjct: 370 VV---DSKEFMDTLKIDLFTRQVFVFTPKGDVIELPAGATPLDFAFKIHTQIGCKCVGAK 426
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VNG +V+ HVL N ++V+IIT +A SS + WL AK+ SAR KI ++L+ Q
Sbjct: 427 VNGKMVTIDHVLNNGDIVDIIT-SANSSGPSI----DWLNMAKSSSARSKIRQWLKSQNK 481
Query: 663 LSASEITADTVGDFVADSGEE 683
+ + + +V G E
Sbjct: 482 NDIIDKGKEVLDKYVRKKGHE 502
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/521 (42%), Positives = 314/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++++ + RA A EAH Q R+SGEP+IIHP++VA IL +LE+D +IAAG LHD
Sbjct: 19 YLSKDDVQFIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E +E EFG V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VVEDTHV-TKEDLEREFGKEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y ++ + E E+ LEE + + ++ + + ++ EI K
Sbjct: 191 ALRYLNPQQYYRIVNLMKKKRAEREQYLEEVIQEMRARLLE------VGIQAEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII++ + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRIIVESI------------KDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT++ E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVVGPKGEP---LEVQIRTFEMHHIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N ++SW I EWQ E + EFV+T+ D
Sbjct: 348 ---------------EGKTIRPN--TFEEKLSWFREIVEWQNE---TNNAEEFVETLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V H L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDHPLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T N ++ + WL+ A+T A++KI +F ++Q
Sbjct: 448 VEILTSN-----HSYGPSQDWLKIAQTSHAKNKIRQFFKKQ 483
>gi|442321697|ref|YP_007361718.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
gi|441489339|gb|AGC46034.1| GTP pyrophosphokinase [Myxococcus stipitatus DSM 14675]
Length = 737
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/534 (39%), Positives = 318/534 (59%), Gaps = 59/534 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ SY +L+++++A + + + H GQ R+SGEP+++HP+EVA IL +L+LD
Sbjct: 3 RLNDILQRVSSYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILADLKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG+ V ++V+G TK+SK + + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGSEVAQLVDGVTKLSKF----SASASLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMNEEKQARIAQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFGLQEKLNKRKKEREKYIEDTCDLIRSKLAE------RG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K E+ K YSIYK + ++++ I RII P CY
Sbjct: 232 LKGEVSGRFKHVYSIYKKIKAQGIDFDQIHDIIAFRIIAPAAPA------------CYEA 279
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT EM IAE
Sbjct: 280 LGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTAEMHKIAEE 336
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + GK V + + +WL + EWQ++
Sbjct: 337 GIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQDL---KD 373
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +V
Sbjct: 374 PKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIV 433
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
+ L N + VE++T + Q+H K WL KT A+ +I F+++Q
Sbjct: 434 PLRYKLKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQQ 479
>gi|115374167|ref|ZP_01461454.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|310820896|ref|YP_003953254.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
gi|115368834|gb|EAU67782.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|309393968|gb|ADO71427.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
Length = 734
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 319/534 (59%), Gaps = 59/534 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ SY +L+++++A + + + H GQ R+SGEP+++HP+EVA IL EL+LD
Sbjct: 3 RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILAELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG V ++V+G TK+SK + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGPEVSQLVDGVTKLSKF----SASATLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +DY + ++ KE EK +E+ + ++ K+E+
Sbjct: 178 ISWIKTELEDLSFRYVKPQDYFSLLEKLNRRKKEREKYIEDTSTLVRSKLEE------RN 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ E+ K YSIYK + ++++ I R+++ P CY
Sbjct: 232 LEGEVSGRFKHVYSIYKKIKAQGIEFDQIHDIIAFRLLMPTVPS------------CYEA 279
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT +M+ +AE
Sbjct: 280 LGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTPDMNKVAEE 336
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH++ + GK + + + +WL + EWQ++
Sbjct: 337 GIAAHWAYK-----------------EGKALISKDDE---KFAWLRQLMEWQQDL---KD 373
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+EF++T+ DL VFVFTP+G++K+LP+GAT VD+AY IH+++G + V AKVNG +V
Sbjct: 374 PKEFLETVKVDLFTDEVFVFTPKGDVKSLPRGATPVDFAYAIHSDVGGRCVGAKVNGKIV 433
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
+ + N ++VE++T + Q H K WL KT A+ +I F+++Q
Sbjct: 434 PLRYKMKNGDMVEVLT--------SPQAHPSKDWLTFVKTSRAQQRIRNFIKQQ 479
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 316/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E +E EFGA V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VVEDTEA-TKEDLEREFGADVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ + + EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKTV N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTVKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ AKT AR+KI +F ++Q
Sbjct: 448 VEILT-----SKHSYGPSQDWLKLAKTSQARNKIRQFFKKQ 483
>gi|444919613|ref|ZP_21239613.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
gi|444708165|gb|ELW49258.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
Length = 740
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/535 (39%), Positives = 320/535 (59%), Gaps = 60/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ SY +L+++++A + + + H GQ R+SGEP++IHP+EVA +L EL+LD
Sbjct: 3 RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGLLAELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG V ++V+G TK+SK + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGPEVAQLVDGVTKLSKF----SASATLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ IA ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQRRIAQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +K+ELE+LSF Y ++Y ++ ++ KE EK +++ + ++ K+ +
Sbjct: 178 ISWVKTELEDLSFRYLKPQEYLALQDKIGRRKKEREKYIDDVSTLITTKLTE------RG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E+ K YSIYK +KS+G +++ + RII P CY
Sbjct: 232 LKGEVSGRFKHVYSIYKK-MKSQGIEFEQIHDVIAFRIITNSMPA------------CYE 278
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LGLVH +W P+P KD+IA PKPN YQSLHTT++ L E R+EVQIRT +M +AE
Sbjct: 279 ALGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHTTVVGPLGE---RIEVQIRTPDMHKVAE 335
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH++ + GK + ++ + + +WL + EWQ++
Sbjct: 336 EGIAAHWAYK-----------------EGKALSVSKDD--EKFAWLRQLMEWQQDL---K 373
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL VFVFTPRG++K+LP+GAT VD+AY IH+++G + V +KVNG +
Sbjct: 374 DPKEFLETVKVDLFTDEVFVFTPRGDVKSLPRGATPVDFAYAIHSDVGGRCVGSKVNGKI 433
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V + L N + VE++T + Q H K WL KT A+ +I F+++Q
Sbjct: 434 VPLRYKLKNGDTVEVLT--------SPQAHPSKDWLTFVKTSRAQQRIRAFIKQQ 480
>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
Length = 732
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 317/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ +++A A +AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSEQDVAFLKKAYEFAKQAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E +E EFGA V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VVEDTEA-TKEDLEREFGADVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ + + EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKTV N + ++SW I +WQ + + EF++++ D
Sbjct: 348 ---------------EGKTVKPN--SFEEKLSWFREILDWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ AKT AR+KI +F ++Q
Sbjct: 448 VEILT-----SKHSYGPSQDWLKLAKTSQARNKIRQFFKKQ 483
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 317/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T E +E EFGA V +V+G V+KLGK+K K++ ++ +A++ R+MFLA
Sbjct: 79 VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYKSQ----EEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ + + EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+GE+ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGEVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKIVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ AKT AR+KI +F ++Q
Sbjct: 448 VEILT-----SKHSYGPSQDWLKLAKTSQARNKIRQFFKKQ 483
>gi|408356412|ref|YP_006844943.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
gi|407727183|dbj|BAM47181.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
Length = 729
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/529 (40%), Positives = 318/529 (60%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
ED+ SYLS ++++L+RRA A++AH+ Q RRSGEP+IIHPV+VA IL +L LD E+
Sbjct: 10 EDVIEIASYLSDDDIKLIRRAFEYAYKAHENQYRRSGEPYIIHPVQVASILAKLGLDAET 69
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IA G LHD VEDT+ T + IEE F + +V+G V+KLGK++ K++ +A+
Sbjct: 70 IAGGFLHDVVEDTDK-TLKDIEEAFNEEIAMLVDG---VTKLGKIQYKSQEAQ----QAE 121
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+MF+AM++++RVI++KLADR+HNMRTL ++PP KQ IA ETL++FAPLA LG+
Sbjct: 122 NHRKMFIAMSKDIRVILIKLADRVHNMRTLKYLPPEKQRRIANETLEIFAPLAHRLGISA 181
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+++ Y N + Y R+ +L K+ +E E N I IE + L+ + ++
Sbjct: 182 IKWELEDVALRYLNPQQYY----RIVNLMKQKREERE--NYIEEVMIEVQKQLEQVNIRA 235
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
E K YSIY+ ++ +E+ + +RII+ + + CY VLG+
Sbjct: 236 EFSGRPKHIYSIYRKMMLQNKQFDEIYDLLAVRIIV------------NSIKDCYAVLGI 283
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H W P+P KDYIA PKPN YQSLHTT+I LEVQIRT+EM IAE GIA
Sbjct: 284 IHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIG---PKGAPLEVQIRTKEMHEIAEYGIA 340
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK+V N +++W I E Q E + E
Sbjct: 341 AHWAYK-----------------EGKSVKPGKGNPEEKLAWFREILESQSE---TNDAEE 380
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ +L V+VFTP+G++ LPKG+ +D+AY IHTEIGN + +VNG +
Sbjct: 381 FMESLKVELFADMVYVFTPKGDVIELPKGSIPIDFAYKIHTEIGNHTIGTRVNGKMEPLD 440
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VE++T S+ ++ + WL +T AR+KI +F ++Q
Sbjct: 441 YQLKNGDIVEVLT-----SQHSYGPSRDWLNMTQTSQARNKIKQFFKKQ 484
>gi|220932056|ref|YP_002508964.1| (p)ppGpp synthetase I SpoT/RelA [Halothermothrix orenii H 168]
gi|219993366|gb|ACL69969.1| (p)ppGpp synthetase I, SpoT/RelA [Halothermothrix orenii H 168]
Length = 716
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/521 (42%), Positives = 318/521 (61%), Gaps = 57/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y + +LELV+RA A +AH+GQ R SGEPFI HP+ VA IL ELELD SI+A LLHD
Sbjct: 13 YTTNPDLELVKRAYNFAKDAHEGQFRVSGEPFIEHPLGVACILAELELDIISISAALLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T + IEEEFG + +V+G TK+++L + K K E+ +A++LR+MFLA
Sbjct: 73 VVEDTSV-TSKNIEEEFGDEIALLVDGVTKLTRL-EFKSKEEH------QAENLRKMFLA 124
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M+E++RV+++KLADRLHNMRTL + KQ A ETL+++APLA LGM ++K ELE+L
Sbjct: 125 MSEDIRVVLIKLADRLHNMRTLRFLAKEKQVEKAKETLEIYAPLAHRLGMSRLKWELEDL 184
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF + +++ Y ++ +VA K+ ++++EA KIL K+ + L EI K
Sbjct: 185 SFRFIDSKMYYEIAEKVAANRKQRIRDIKEAIKILNDKLGNQGIL------AEIYGRPKH 238
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RII+ + + CY VLG+VH IW PI
Sbjct: 239 LYSIYQKMKRKEVDFNEIYDLTAIRIIV------------NSVKECYEVLGIVHEIWKPI 286
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRT EM AE GIAAH+
Sbjct: 287 PGRFKDYIAMPKSNMYQSLHTTVIGPKGDP---LEVQIRTPEMHRTAEYGIAAHW----- 338
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ GKT + ++SWL I EWQ++ +EF++ + D
Sbjct: 339 ------------KYKEGKT---GKDDFEEKLSWLRQILEWQKDL---KEPQEFIENLKID 380
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ +LP G+T VD+AY IHTE+G+ V AKVNG +V + ++N ++
Sbjct: 381 LFEDEVFVFTPKGDVISLPTGSTPVDFAYNIHTEVGHSCVGAKVNGKIVPLEYRMSNGDI 440
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK++ + WL+ KT AR KI ++ ++Q
Sbjct: 441 VEILT-----SKNSTGPSRDWLKFVKTSRARSKIKRWFKQQ 476
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 318/521 (61%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++E +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSERDVEFIKKAYEFANHAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E +E EFG+ V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VVEDTEA-TKEDLEREFGSEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ +++ EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVSIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ A+T A++KI +F ++Q
Sbjct: 448 VEILT-----SKHSYGPSQDWLKLAQTSHAKNKIRQFFKKQ 483
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/530 (42%), Positives = 316/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+IIHP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++++++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIEELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + VTG K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAV---DA 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
Length = 716
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 315/537 (58%), Gaps = 58/537 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L+LVR+A + + H GQ R SGEP+++HP+EVA IL +L+LD
Sbjct: 3 RLNDILDKVASYNPACDLDLVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGILADLKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDTVEDT + T E +E FGA V R+V+G V+K+GK+ K + S
Sbjct: 63 VPTVVTGLLHDTVEDT-LTTLEELEGMFGAEVARLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ SIA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +KSELE+LSF Y + + Y + +V KE E ++E +I+ +K+ D
Sbjct: 175 ISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERESYVDEVMQIIKEKLADH------G 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ E+ K YSIY+ + I+E+ + +R++++ + CY V
Sbjct: 229 ITGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLVAIRVMVE------------DIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT EM +AE
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTGEMHRVAEA 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +WL + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------KRFTWLRQLLEWQQEL---DD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREF+DT+ +L V+VFTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDTVKVELFPEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
+ L N ++VE+IT + K WL+ ++ AR+KI +++ + L +
Sbjct: 431 PLKYELKNGDIVEVITSPHHTPS------KDWLKIVRSSRARNKIRAWIKTEERLRS 481
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/530 (42%), Positives = 316/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+IIHP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++++++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIEELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + VTG K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/530 (42%), Positives = 316/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+IIHP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++++++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIEELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + VTG K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/530 (42%), Positives = 316/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+IIHP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++++++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIEELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + VTG K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/530 (42%), Positives = 316/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+IIHP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++++++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIEELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + VTG K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGVTG-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|383454940|ref|YP_005368929.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
gi|380734107|gb|AFE10109.1| GTP pyrophosphokinase [Corallococcus coralloides DSM 2259]
Length = 739
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/535 (40%), Positives = 318/535 (59%), Gaps = 61/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L+ SY +L+++++A + + + H GQ R+SGEP++IHP+EVA IL EL+LD
Sbjct: 3 RLNDILQRVASYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGILAELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI GLLHDT+EDT + T E + E FG V ++V+G TK+SK + S ++
Sbjct: 63 EASIVTGLLHDTIEDT-LATAEELTELFGPEVAQLVDGVTKLSKF----SASATLSQEEK 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ I ETL ++APLA LG
Sbjct: 118 QAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIGQETLDIYAPLANRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y +++ ++ ++ KE E +E+ ++ K+++
Sbjct: 178 ISWIKTELEDLSFRYVKPQEFFALEEQLNKRKKEREAYIEDTCDLMRAKLQE------RG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K ++ K YSI+K + KS+G ++++ I RII P CY
Sbjct: 232 LKGDVSGRFKHVYSIWKKI-KSQGIDFDQIHDIIAFRIIAPSVPS------------CYE 278
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG+VH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT EM IAE
Sbjct: 279 ALGMVHQMWKPVPGRFKDFIAIPKPNMYQSLHTTVIGPLSE---RVEVQIRTAEMHKIAE 335
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ A GR+P K + +WL + EWQ++
Sbjct: 336 EGIAAHW------------AYKEGRAPISKD--------DEKFAWLRQLMEWQQDL---K 372
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++G + V AKVNG +
Sbjct: 373 DPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGGRCVGAKVNGKI 432
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V + L N + VE++T + Q H K WL KT A+ +I F+++Q
Sbjct: 433 VPLRYKLKNGDTVEVLT--------SPQAHPSKDWLTFVKTSRAQQRIRGFIKQQ 479
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 315/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T E +E EFGA V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ + + EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T N ++ + WL+ AKT AR+KI +F ++Q
Sbjct: 448 VEILTSN-----HSYGPSQDWLKLAKTSQARNKIRQFFKKQ 483
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 315/521 (60%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T E +E EFGA V +V+G V+KLGK+K K S ++ +A++ R+MFLA
Sbjct: 79 VIEDTEA-TKEDLEREFGAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ + + EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVHIPCEISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T N ++ + WL+ AKT AR+KI +F ++Q
Sbjct: 448 VEILTSN-----HSYGPSQDWLKLAKTSQARNKIRQFFKKQ 483
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 318/521 (61%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL ++E +++A A AH Q R+SGEP+IIHP++VA IL +L++D +IAAG LHD
Sbjct: 19 YLPEKDVEFIKKAYEFADRAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E +E EFG+ V +V+G V+KLGK+K K++ ++ +A++ R+MFLA
Sbjct: 79 VVEDTEA-TKEDLEREFGSEVAMLVDG---VTKLGKIKYKSQ----EEQQAENHRKMFLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K+ E E+ + +++++ + L+ +++ EI K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKKKRAEREQYLEEVIQEVRER--LNEVSIPCEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I E LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHQIAEFGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + + EF++++ D
Sbjct: 348 ---------------EGKTIKPN--SFEEKLSWFREILEWQND---ASNAEEFMESLKMD 387
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V + L ++
Sbjct: 388 LFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVPLDYKLQTGDI 447
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ A+T A++KI +F ++Q
Sbjct: 448 VEILT-----SKHSYGPSQDWLKLAQTSHAKNKIRQFFKKQ 483
>gi|323450143|gb|EGB06026.1| hypothetical protein AURANDRAFT_10270, partial [Aureococcus
anophagefferens]
Length = 504
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/528 (43%), Positives = 314/528 (59%), Gaps = 44/528 (8%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L V AL +A AH GQ RRSGEPFI+HPV VA +L L +D E++AAGLLHDTVEDT
Sbjct: 3 LSFVHDALRVAHGAHAGQMRRSGEPFIVHPVAVAGLLCGLGMDRETVAAGLLHDTVEDT- 61
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
VT E IE FGA VR IVEGETKVSKL KL + + ++LRQMF++MT++ R
Sbjct: 62 AVTLEEIEATFGADVRAIVEGETKVSKLPKLAKREQ--------LENLRQMFISMTDDYR 113
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
+IIVKLADRLHNMRTL HMP HKQ IA ETL++FAPLA LG++ K+ELE+ +F Y +
Sbjct: 114 IIIVKLADRLHNMRTLEHMPRHKQLRIARETLEIFAPLAHRLGLWTFKAELEDWAFRYAH 173
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
YA ++ + +E L+ + K L ++ D L VK + KE YS++
Sbjct: 174 PGPYAALEAALEVRRSRYESALKGSRKALEARLAADP--KLRGVKVSVSGRTKELYSLWL 231
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ----ICYHVLGLVHGI--WTPI 439
+ R ++ V + LR++++ PL + ++ +CYHVLGLV + +
Sbjct: 232 KM--ERADLDGVPDVVALRVVLEVPRDGAAEPLEAWRERSTWLCYHVLGLVQQLKGCEAV 289
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY---SG 496
PR +KDYI+ PKPNGYQSLH +L + + +EVQIRT M +AE G+AAH+ G
Sbjct: 290 PR-VKDYISFPKPNGYQSLHASLRREAEDQV--VEVQIRTAWMHEVAEHGMAAHWLYKDG 346
Query: 497 RVFVTGLVGHARP-NGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
V L P +GR K +SWLN++++WQ E +SREFV+T
Sbjct: 347 LFSVEDLDDDGEPADGRRGVAKPYA---------VSWLNSVKDWQHEI---HSSREFVET 394
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
I +++LG RVFVF G+I +L +GATV+D A+ IHTEIG K+ A VNG V ++ L
Sbjct: 395 IRKEVLGKRVFVFLRDGQILDLSRGATVLDAAFHIHTEIGLKVATAYVNGQEVQLSYELK 454
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAAL 663
N +VV + S+ + WL A+ RS R K+ + RE+ L
Sbjct: 455 NGDVVSV------STSEDARPQLDWLRMAQRRSTRAKLRAYFREEQRL 496
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/530 (41%), Positives = 314/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+I HP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++K+++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + + G K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
gi|255268733|gb|EET61938.1| RelA/SpoT family protein [Marvinbryantia formatexigens DSM 14469]
Length = 774
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 326/543 (60%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
P+ L+++L +I P+ + ++ +A +A EAH GQKR+SGEP+IIHP+ VA IL +
Sbjct: 33 DPDALYQELIASIKRYHPSADTSMIEKAYKIASEAHKGQKRKSGEPYIIHPLCVAIILAD 92
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AGLLHD VEDT V+T E I +EFG V ++V+G V+KLG+L +
Sbjct: 93 LEMDKETITAGLLHDVVEDT-VMTSEEIRQEFGEDVEQLVDG---VTKLGQLSYSADKIE 148
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 149 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMSPEKQKEKARETMDIYAPIA 205
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + Y + +VA E EK ++ + K IED
Sbjct: 206 QRLGISKIKVELDDLSLKYLQPDVYYDLVEKVALRKTEREKFVQGIVDEVKKHIED---- 261
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ +I+++ + +RII+ +
Sbjct: 262 --AGIRAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------------DTVKD 307
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 308 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGTPF--------EIQIRT 359
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + + +G+ P +++ +++WL I EW
Sbjct: 360 FEMHKTAEYGIAAHWKYK---------EQSDGKKP-------DSSREEEKMTWLRQILEW 403
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N EF++ + DL V+ FTP G++KNLP G+T +D+AY +H+ +GNK
Sbjct: 404 QRDMSDN---HEFLNLLKSDLDLFAENVYCFTPAGDVKNLPAGSTPIDFAYNVHSAVGNK 460
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ +V+ N + VEIIT S+++ + WL+ K+ A++KI ++
Sbjct: 461 MVGARVNGKLVNIDYVIQNGDRVEIIT-----SQNSRGPSRDWLKIVKSTQAKNKINQWF 515
Query: 658 REQ 660
+++
Sbjct: 516 KQE 518
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/530 (41%), Positives = 314/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+I HP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++K+++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + + G K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPAGATPIDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|167629913|ref|YP_001680412.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
gi|167592653|gb|ABZ84401.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
Length = 736
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 215/519 (41%), Positives = 306/519 (58%), Gaps = 57/519 (10%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
+P +LE VRRA A AH GQ R+SGEP+I HP+ VA IL +LELD +IAAGLLHD V
Sbjct: 18 NPADLEFVRRAFEYADAAHTGQLRKSGEPYIYHPMAVAYILADLELDVATIAAGLLHDVV 77
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT +T E++E++FG V +V+G TK+S+L E HS Q+ + + LR+MFLAM
Sbjct: 78 EDT-AITQEQLEKDFGPEVALMVDGVTKLSRL-------EFHSKQEQQVESLRKMFLAMA 129
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL H P KQ IA ET+++FAPLA LG+ +IK ELE+L+
Sbjct: 130 KDIRVILIKLADRLHNMRTLKHQTPEKQREIAIETIELFAPLANRLGISRIKWELEDLAL 189
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y E Y + R+A E E+ + E IL +K L + +K EI K Y
Sbjct: 190 RYLEPETYYDLVTRIATKRAEREERINEIIAILREK------LAAVGIKAEISGRPKHFY 243
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY+ + + ++E+ + +R+ L + CY LG++H IW PIP
Sbjct: 244 SIYRKMTSQKKDLSEIYDLIAVRV------------LVDSVKDCYGALGIIHTIWKPIPM 291
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYIATPK N YQSLHTTL+ L E EVQIRT EM AE GIAAH+ +
Sbjct: 292 RFKDYIATPKTNMYQSLHTTLVGPLGEP---FEVQIRTAEMHRTAEYGIAAHWK---YKE 345
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G + GRS K ++WL + EWQ + ++ F++T+ +
Sbjct: 346 G----GKTQGRSFEEK------------LAWLRQLLEWQSD---QKDTQTFMETLKIEFF 386
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ LP G+T +D+AY IH+ +G++ + AKVNG +V + L N E++E
Sbjct: 387 SDAVFVFTPKGDVIELPAGSTPIDFAYRIHSNVGHRCMGAKVNGRIVPLDYRLNNGEIIE 446
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
I+T K+ + WL KT +AR++I ++ +++
Sbjct: 447 ILT------KTTAGHSRDWLNVVKTSNARNRIRQWFKKE 479
>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
Length = 765
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 321/548 (58%), Gaps = 63/548 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE L+++L I +P +L +V A A AH QKR SGEPFI+HP+EVA+IL E
Sbjct: 35 DPEALFKELLEKIKSYNPKADLSVVVAAYEFAANAHREQKRFSGEPFIVHPLEVAKILAE 94
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E++ AGLLHD VEDT V T + I E+FG +V+G TK+S++ E S
Sbjct: 95 LELDQETLVAGLLHDVVEDTGV-TLQDIREQFGVETALLVDGTTKLSRI-------EYKS 146
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++++A++LR+MFLAM +++RVI++KLADRLHN+RTL + P KQ IA ETL++FAPLA
Sbjct: 147 KEELQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLKYHPEPKQVEIANETLEIFAPLA 206
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+Y+IK ELE+LSF + + Y ++ ++A + E+ + IL K+E+
Sbjct: 207 HRLGIYRIKWELEDLSFRFKEPDRYFELVNKIASTRDKREEYIRSVISILAGKLEE---- 262
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++ EI+ K YSIY +++ + +NE+ + +R C L +
Sbjct: 263 --VGIEAEIQGRPKHFYSIYAKMIEQQKDLNEIFDVMAVR-------C-----LVETVRD 308
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG+VH +WTPIP KDYIA PK N YQSLHTT+I E LE+QIRT EM
Sbjct: 309 CYATLGIVHTMWTPIPGRFKDYIAMPKSNMYQSLHTTVIGPQGEP---LEIQIRTREMHR 365
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + GRS R +++WL + EWQ +
Sbjct: 366 TAEYGIAAHW-----------RYKEGGRSDR---------EFDKKLAWLRQLLEWQHDL- 404
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+REF++++ DL VFVF+P+G++ LP G+ +D+AY IHT++G++ V A+VN
Sbjct: 405 --RDAREFMESLKIDLFADVVFVFSPKGDVIELPAGSIPLDFAYRIHTDVGHRCVGARVN 462
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQ 660
G +V + L N ++VEI+T S S R WL KT +A+ KI ++ RE+
Sbjct: 463 GRIVPLEYKLKNGDIVEILT----SKNSGPSR--DWLNIVKTSNAKTKIRQWFKKEKREE 516
Query: 661 AALSASEI 668
L EI
Sbjct: 517 NILKGKEI 524
>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 719
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 209/520 (40%), Positives = 315/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L+L+ ++ A AHDGQ R SGEP+I+HP+EV+ IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LDLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T+E++ E+FG + +V+G V+KLGK++ K++ +A+++R+M +AM +++R
Sbjct: 79 V-TYEQLLEKFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++PP KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREELIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKSFDQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDKFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T VD+AY IHTEIG+++ AKVNG LV + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPVDFAYSIHTEIGHRLNGAKVNGKLVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 307/522 (58%), Gaps = 58/522 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +LELVRRA A AHDGQ R SGE FI HP+EVA IL +LELD +IAA LLH
Sbjct: 13 SYNPSADLELVRRAYEFAKNAHDGQHRVSGELFIFHPLEVAMILADLELDTITIAASLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN + E I + FG+ + +V+G TK+SKL + K K E +A++LR+MFL
Sbjct: 73 DVVEDTNY-SLEDIAKNFGSEIALLVDGVTKLSKL-EYKTKEEQ------QAENLRKMFL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL ++P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 125 AMAKDIRVILIKLADRLHNMRTLKYLPEKKQKEIAVETLEIFAPLAHRLGISKIKWELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y Y ++ +VA +E E+ + +L ++ L +K EI+ K
Sbjct: 185 LAFRYLEPNHYYELVDKVAKKRREREEHINNMIALLRER------LTAAGIKAEIQGRPK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + + S ++ + +R+I+ + CY LG+VH +W P
Sbjct: 239 HFYSIYKKMKEQNKSFEQIFDLTAVRVIV------------DTVRDCYAALGVVHTLWKP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PKPN YQSLHTT+I E LE+QIRT EM AE GIAAH+
Sbjct: 287 IPGRFKDYIAMPKPNMYQSLHTTVIDSSGEP---LEIQIRTYEMHKTAEYGIAAHW---- 339
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
R G + ++SWL I +WQ + +REF++++
Sbjct: 340 -------------RYKEGN----KEDDFDKKLSWLREILDWQRDL---RDAREFMESLKI 379
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ +LP G+ +D+AY IHT+IGN+ V AKVNG +V + L N +
Sbjct: 380 DLFADEVYVFTPKGDVIDLPAGSCPIDFAYRIHTDIGNRCVGAKVNGKMVPLDYKLTNGD 439
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT + + S WL+ K+ A++KI ++ +++
Sbjct: 440 IVEIITSSHSNGPSW-----DWLQFVKSTQAKNKIRQWFKKE 476
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 221/530 (41%), Positives = 314/530 (59%), Gaps = 57/530 (10%)
Query: 134 LRPTISYLSPN----ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L IS + N +++LV++A LAFEAH QKR SGEP+I HP+ VA IL ++ +D
Sbjct: 2 LEELISKIKANGNNVDIDLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDT 61
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD +EDT+ T+E I F V +V+G V+KLGK+K K S ++ +
Sbjct: 62 NTIVAGLLHDVIEDTDY-TYEDISNIFNVEVANLVDG---VTKLGKIKYK----SKEEQQ 113
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
AD++R+M LAM +++RVII+KLADRLHNMRTL +M P KQ A ETL +FAPLA LG+
Sbjct: 114 ADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGI 173
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+IK ELE+L Y + E+Y + +A+ E EK + ++K+++++ LD +
Sbjct: 174 SKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFISR----IIKELKEN--LDKANI 227
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
++I K YSIY+ ++ SI ++ + +RI L + + CY VL
Sbjct: 228 DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI------------LVNTVKDCYAVL 275
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE G
Sbjct: 276 GIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKT---FEIQIRTFEMHRTAEYG 332
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + + G K + N +++WL I EWQ+E V +
Sbjct: 333 IAAHWKYKSGING-----------TDSKDMTFEN-----KLTWLRDILEWQKEAVD---A 373
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ DL +FVFTP+G + NLP GAT +D+AY IHT+IGNK V AKVNG +V+
Sbjct: 374 TEFMEGFKLDLFSDEIFVFTPKGVVINLPVGATPLDFAYKIHTDIGNKCVGAKVNGKIVT 433
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L E+VEI+T S S+ + WL A + AR KI ++LR+
Sbjct: 434 LDYKLKTGEIVEILT-----SSSSRGPNIDWLNIANSNQARSKIKQWLRK 478
>gi|256619448|ref|ZP_05476294.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
gi|256598975|gb|EEU18151.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
Length = 737
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENYRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
Length = 719
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 209/520 (40%), Positives = 315/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L+L+ ++ A AHDGQ R SGEP+I+HP+EV+ IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LDLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T+E++ E+FG + +V+G V+KLGK++ K++ +A+++R+M +AM +++R
Sbjct: 79 V-TYEQLLEKFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++PP KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREELIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKSFDQIYDLLAVRIIV------------NTVKECYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDKFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T VD+AY IHTEIG+++ AKVNG LV + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPVDFAYSIHTEIGHRLNGAKVNGKLVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
Length = 760
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 215/545 (39%), Positives = 322/545 (59%), Gaps = 63/545 (11%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+P+ L+E L + P +++ L+ +A A EAH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 18 TPDTLYEGLIKRVRKYHPSDDISLIEKAYNQAAEAHQGQLRKSGEPYIIHPLCVAIILAD 77
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT + T E I+E FGA V +V+G TK++ L +L N N +
Sbjct: 78 LEMDKETIAAGLLHDVVEDT-ICTKEEIQESFGADVALLVDGVTKLTAL-QLSTDNTNKT 135
Query: 245 VQ--DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+ D++A +LR+MFLAM +++RVI++KLADRLHNMRTL+HMPP KQ IA ETL +++P
Sbjct: 136 QEQIDMQAQNLRKMFLAMAKDIRVILIKLADRLHNMRTLAHMPPEKQQRIAQETLDIYSP 195
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
+A LG+ +IK EL++LS Y + Y + +V+ E EK +E+ + + + D
Sbjct: 196 IAGRLGISRIKVELDDLSLKYLKPDVYYDLVDKVSIRKSEREKYVED----ICENVRD-- 249
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ ++ E+ K +SIYK + +++++ + +RII+ +
Sbjct: 250 AIKTAGIEGEVNGRVKHFFSIYKKMRNQNKTLDQIYDLFAIRIIV------------ATV 297
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QI
Sbjct: 298 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGQTGQPF--------EIQI 349
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT +M AE GIAAH+ + G NG +++WL I
Sbjct: 350 RTYDMHKAAEYGIAAHWK---YKETSDGKKAENGEEE--------------KLTWLRQIL 392
Query: 538 EWQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ++ N +EF++ + D L V+ FTP GE+KNLP G+T +D+AY +H+ +G
Sbjct: 393 EWQQDMSDN---QEFMNLLKSDLNLFSDDVYCFTPTGEVKNLPAGSTPIDFAYSVHSAVG 449
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKM+ AKVNG LV + + N + +EI+T S+++ + WL AK S ++KI +
Sbjct: 450 NKMIGAKVNGKLVPIDYKIQNGDRIEIVT-----SQNSRGPSRDWLSIAKATSTKNKINQ 504
Query: 656 FLREQ 660
+ R +
Sbjct: 505 WFRHE 509
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 325/566 (57%), Gaps = 63/566 (11%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L+ +Y + + EL+++A A EAH GQKR SGE +I HP+ VA IL L++D E+IA
Sbjct: 8 LKKIKNYNNNMDEELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIA 67
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
AGLLHD VEDT T E I EFG V +V+G V+KL +++ KN+ ++ + ++L
Sbjct: 68 AGLLHDVVEDT-AYTIEDIAREFGEEVANLVDG---VTKLSRIEFKNK----EEQQVENL 119
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+MFLAM +++RVI++KLADRLHNMRTL + P KQ IA ETL++FAPLA LG+Y+IK
Sbjct: 120 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIK 179
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+L+F Y + ++Y + ++A + E+ +++ IL +K++ +K +I
Sbjct: 180 WELEDLAFRYLDPDNYYDIVEKIAKTRAKREQYIQQVISILEEKLKS------YNIKAKI 233
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSI++ + + + +EV + +R+I++ + CY VLG++H
Sbjct: 234 EGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVE------------SVRDCYTVLGIIH 281
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA PK N YQSLHTT+I E LE+QIRT EM AE GIAAH
Sbjct: 282 TMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEP---LEIQIRTFEMHRTAEYGIAAH 338
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ R K + ++SWL I EWQ E +REF+
Sbjct: 339 W--------------------RYKEGGKGDKKFDEKLSWLRQILEWQREL---KDAREFM 375
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+T+ D+ VFVFTP+G++ LP G+ +D+AY IHT++GN+ V AKVNG LV +
Sbjct: 376 ETLKVDIFSDSVFVFTPKGDVVELPAGSVPIDFAYRIHTDVGNRCVGAKVNGRLVPLDYQ 435
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEIT 669
L N ++VEIIT K + WL+ KT A+ KI + RE+ AL E+
Sbjct: 436 LKNGDIVEIIT------KQGAAPSRDWLKIVKTSHAKGKIKSYFKKTQREELALRGRELI 489
Query: 670 ADTVGDFVADSGEESEVEDLSDGSKQ 695
+ + EE +E +S+ K+
Sbjct: 490 EKEIKKLGLNP-EEYSLEKISEVVKK 514
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 308/544 (56%), Gaps = 53/544 (9%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L Y +L+L+++A + + + H GQ R+SGEP++IHP+EVA +L EL+LD
Sbjct: 17 RLNDILDRVAGYHPGPDLDLIKKAYVYSAKVHQGQIRKSGEPYLIHPLEVAGLLAELKLD 76
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
S+ GLLHDT+EDT + T E I E FG + +V+G TK+S+ + E
Sbjct: 77 EASVVTGLLHDTIEDT-LATKEEIAELFGPEIAELVDGVTKLSQFSAANTQEEK------ 129
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RV++VKLADR HNMRTL HM P Q IA ETL ++APLA LG
Sbjct: 130 QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDHMKPESQERIARETLDIYAPLANRLG 189
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +KSELE+LSF Y +DY ++ RV KE + +EE ++ + L
Sbjct: 190 IQWLKSELEDLSFKYLRPQDYVELSTRVEAEQKEKGEFVEEVVDLIRTR------LTGAG 243
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ ++ K YSI++ + + +++ + R+I+ CY
Sbjct: 244 INAQVSGRVKHVYSIWRKMRQLDVDFDQIQDVIGFRVIV------------DSVAECYES 291
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H +W P+P KDYIA PKPN YQSLHTT++ E R+EVQIRT+EM IAE
Sbjct: 292 LGIIHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPRGE---RIEVQIRTKEMHRIAEE 348
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH++ + GR +G + +A WL + EWQ E
Sbjct: 349 GVAAHWA-----------YKEKGRDGKGAELSKKDAE---SFGWLRQLVEWQRELA---D 391
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
REF++T+ DL VFVFTP+G +K+LP+GAT VD+AY IH+E+G V AKVNG LV
Sbjct: 392 PREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEVGEHTVGAKVNGKLV 451
Query: 609 SPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
+ L N + VEI+T NA SK WL KT A+ +I +F+R+ + E
Sbjct: 452 PLRYKLKNGDTVEILTSPNAHPSKD-------WLSFVKTSRAQARIRQFIRQAEHRRSLE 504
Query: 668 ITAD 671
I D
Sbjct: 505 IGRD 508
>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
Length = 768
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 217/544 (39%), Positives = 321/544 (59%), Gaps = 62/544 (11%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SPE+L+++L ++ P+ ++ L+ +A +A+EAH GQ R+SGEP+IIHP+ VA IL
Sbjct: 27 ESPEKLYQELIASVRKYHPSTDISLIEKAYNIAYEAHKGQVRKSGEPYIIHPLCVAIILA 86
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD E+I AGLLHD VEDT V+T E I++EFGA V +V+G V+KLG+L +
Sbjct: 87 ELELDKETIVAGLLHDVVEDT-VMTDEEIKQEFGAEVALLVDG---VTKLGQLSYDADKV 142
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+
Sbjct: 143 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 199
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK EL++LS Y E Y + ++A + ++ + + K I +
Sbjct: 200 AQRLGISKIKIELDDLSLKYLEPEAYYDLVHQIAQRKSVRDDYVQSLVEEVKKHIHE--- 256
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ +I K +SIYK + +++++ + +RII+ +
Sbjct: 257 ---AGIPAQIDGRAKHFFSIYKKMKNQDKTLDQIYDLFAIRIIV------------DSVK 301
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIR
Sbjct: 302 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 353
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + A NG + TV ++SWL I E
Sbjct: 354 TYEMHRTAEYGIAAHWKYK--------EASNNGGAAAPMTVTEEE-----KLSWLRQILE 400
Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N +EF+ + DL VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 401 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPNGSTPIDFAYSIHSAVGN 457
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM+ AKVNG LV +V+ N + +E++T S+++ + WL K+ A++KI ++
Sbjct: 458 KMIGAKVNGKLVPIDYVIQNGDRIEVLT-----SQNSKGPSRDWLNIVKSTQAKNKINQW 512
Query: 657 LREQ 660
R +
Sbjct: 513 FRSE 516
>gi|257090255|ref|ZP_05584616.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|312902753|ref|ZP_07761957.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|422690313|ref|ZP_16748370.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
gi|422702134|ref|ZP_16759974.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|256999067|gb|EEU85587.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|310633807|gb|EFQ17090.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|315169383|gb|EFU13400.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|315576684|gb|EFU88875.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
Length = 737
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|389571985|ref|ZP_10162073.1| GTP diphosphokinase [Bacillus sp. M 2-6]
gi|388428471|gb|EIL86268.1| GTP diphosphokinase [Bacillus sp. M 2-6]
Length = 736
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 308/521 (59%), Gaps = 52/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ + RA A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD
Sbjct: 19 YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTDV-TLEDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K E EE ++ +++D + + +K E K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RI L + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVMQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH+
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ T A ++SW I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 452 IEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 487
>gi|29376496|ref|NP_815650.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227519316|ref|ZP_03949365.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229545443|ref|ZP_04434168.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|229549687|ref|ZP_04438412.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|255972385|ref|ZP_05422971.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255975488|ref|ZP_05426074.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256762903|ref|ZP_05503483.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256853488|ref|ZP_05558858.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256959287|ref|ZP_05563458.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256964754|ref|ZP_05568925.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|257079353|ref|ZP_05573714.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|257082207|ref|ZP_05576568.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|257084825|ref|ZP_05579186.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|257087178|ref|ZP_05581539.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257419654|ref|ZP_05596648.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294779745|ref|ZP_06745132.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|300860169|ref|ZP_07106256.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|307268139|ref|ZP_07549526.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|307272834|ref|ZP_07554081.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|307275913|ref|ZP_07557046.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|307277696|ref|ZP_07558782.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|307287881|ref|ZP_07567914.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|307295910|ref|ZP_07575742.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|312900879|ref|ZP_07760173.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|312951286|ref|ZP_07770187.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|384513600|ref|YP_005708693.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|384518976|ref|YP_005706281.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|397700204|ref|YP_006537992.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|422686386|ref|ZP_16744584.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|422692692|ref|ZP_16750707.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|422697189|ref|ZP_16755135.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|422704878|ref|ZP_16762688.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|422711426|ref|ZP_16768355.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|422713284|ref|ZP_16770037.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|422717180|ref|ZP_16773870.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|422719465|ref|ZP_16776106.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|422724016|ref|ZP_16780506.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|422725202|ref|ZP_16781670.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|422730242|ref|ZP_16786635.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|422732553|ref|ZP_16788884.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|422735767|ref|ZP_16792033.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|422741846|ref|ZP_16795868.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|424672845|ref|ZP_18109788.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|424678338|ref|ZP_18115178.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|424682195|ref|ZP_18118972.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|424685423|ref|ZP_18122121.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|424688183|ref|ZP_18124799.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|424691052|ref|ZP_18127579.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|424694635|ref|ZP_18131031.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|424695820|ref|ZP_18132193.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|424702067|ref|ZP_18138230.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|424704288|ref|ZP_18140390.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|424712754|ref|ZP_18144923.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|424716877|ref|ZP_18146176.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|424722259|ref|ZP_18151323.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|424722967|ref|ZP_18151987.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|424728350|ref|ZP_18156957.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|424740517|ref|ZP_18168899.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|424749874|ref|ZP_18177951.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|424759337|ref|ZP_18187003.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|428767377|ref|YP_007153488.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|430360791|ref|ZP_19426449.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|430367252|ref|ZP_19427815.1| RelA/SpoT family protein [Enterococcus faecalis M7]
gi|29343960|gb|AAO81720.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227073245|gb|EEI11208.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229305167|gb|EEN71163.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|229309359|gb|EEN75346.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|255963403|gb|EET95879.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255968360|gb|EET98982.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256684154|gb|EEU23849.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256711947|gb|EEU26985.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256949783|gb|EEU66415.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256955250|gb|EEU71882.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|256987383|gb|EEU74685.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|256990237|gb|EEU77539.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|256992855|gb|EEU80157.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|256995208|gb|EEU82510.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257161482|gb|EEU91442.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294453119|gb|EFG21534.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|295113238|emb|CBL31875.1| (p)ppGpp synthetase, RelA/SpoT family [Enterococcus sp. 7L76]
gi|300849208|gb|EFK76958.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|306496241|gb|EFM65820.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|306501026|gb|EFM70333.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|306505575|gb|EFM74759.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|306507243|gb|EFM76380.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|306510448|gb|EFM79471.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|306515529|gb|EFM84057.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|310630722|gb|EFQ14005.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|311291978|gb|EFQ70534.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|315025979|gb|EFT37911.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|315028900|gb|EFT40832.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|315033291|gb|EFT45223.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|315034529|gb|EFT46461.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|315143404|gb|EFT87420.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|315149223|gb|EFT93239.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|315152592|gb|EFT96608.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|315159888|gb|EFU03905.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|315161370|gb|EFU05387.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|315163667|gb|EFU07684.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|315167501|gb|EFU11518.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|315174315|gb|EFU18332.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|315574555|gb|EFU86746.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|315581803|gb|EFU93994.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|323481109|gb|ADX80548.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|327535489|gb|AEA94323.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|397336843|gb|AFO44515.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|402349566|gb|EJU84510.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|402351666|gb|EJU86546.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|402353351|gb|EJU88183.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|402358773|gb|EJU93433.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|402361575|gb|EJU96125.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|402362896|gb|EJU97408.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|402370073|gb|EJV04313.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|402370270|gb|EJV04490.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|402379160|gb|EJV12977.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|402379631|gb|EJV13423.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|402382377|gb|EJV16044.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|402386637|gb|EJV20139.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|402389444|gb|EJV22840.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|402394029|gb|EJV27227.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|402400374|gb|EJV33205.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|402401938|gb|EJV34677.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|402404795|gb|EJV37408.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|402407443|gb|EJV39973.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|427185550|emb|CCO72774.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|429512728|gb|ELA02326.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|429516725|gb|ELA06204.1| RelA/SpoT family protein [Enterococcus faecalis M7]
Length = 737
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|257422238|ref|ZP_05599228.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|422705431|ref|ZP_16763233.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
gi|257164062|gb|EEU94022.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|315157277|gb|EFU01294.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
Length = 737
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|256961538|ref|ZP_05565709.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|293384703|ref|ZP_06630558.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|293387403|ref|ZP_06631958.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|312908311|ref|ZP_07767275.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|312910615|ref|ZP_07769457.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
gi|256952034|gb|EEU68666.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|291078010|gb|EFE15374.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|291083194|gb|EFE20157.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|310625725|gb|EFQ09008.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|311289163|gb|EFQ67719.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
Length = 737
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
Length = 724
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 216/526 (41%), Positives = 311/526 (59%), Gaps = 67/526 (12%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y SP ++ + RA A +AH GQ R SGEP++ HP+ VA IL ELELD ++ A LLHD
Sbjct: 13 YHSPEDITEIERAYAFAEKAHAGQTRISGEPYVCHPLAVAIILAELELDAATLIAALLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T E ++ +FG V +V+G V+KLGKL E S ++ +A++LR+MFLA
Sbjct: 73 VVEDTEV-TLEEVKLQFGEEVALLVDG---VTKLGKL----EFMSKEEAQAENLRKMFLA 124
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+I+KLADRLHNMRTL + P KQ IA ETL++F PLA LG+++ K ELE+L
Sbjct: 125 MAKDIRVLIIKLADRLHNMRTLVYQPERKQVEIAEETLEIFVPLAHRLGIFRFKWELEDL 184
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF+Y + Y ++ RR+ KE E+ + E L+ +I + L + ++ +I K
Sbjct: 185 SFLYLEPDTYYELARRLKAKRKEREEYVHE----LIARIRAE--LQKIGIEADIAGRPKN 238
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY +LK ++E+ +R+ L + CY VLG++H +W P+
Sbjct: 239 LYSIYTKMLKQGKDLDEIYDKIAIRV------------LVDTVRDCYGVLGIIHTLWKPL 286
Query: 440 PRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
P KDYIA PKPN YQSLHTTLI PF EVQIRT EM AE GIAAH+
Sbjct: 287 PGRFKDYIAMPKPNMYQSLHTTLIGRGGEPF--------EVQIRTWEMHRTAEYGIAAHW 338
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
R GKT +++ +++WL + EWQ+E +REF++
Sbjct: 339 -----------------RYKEGKT---KTSDLDEKLAWLRQMLEWQQEV---KDTREFME 375
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
++ DL VFVFTP+G++ LP+G+ VD+AY +HTE+G++ V AKVNG +V H L
Sbjct: 376 SLRIDLFADTVFVFTPKGDVVELPRGSCPVDFAYRVHTEVGHRCVGAKVNGRIVPLDHQL 435
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
N ++V+IIT SK + + WL KT A+ +I ++ +++
Sbjct: 436 NNGDIVQIIT-----SKQSTGPSRDWLNFVKTSQAKSRIKQWFKKE 476
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 218/534 (40%), Positives = 313/534 (58%), Gaps = 54/534 (10%)
Query: 131 WEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
WE L +YLS + +L+RRA +A +AH+G+ R+SGEPFI HPV VA IL +L+ D +
Sbjct: 4 WETLDKGTNYLSSLDKDLIRRAYEVADKAHEGEYRKSGEPFISHPVNVALILADLKQDAQ 63
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+IA+ LLHDTVEDTN+ T + IE FG V R+V+G TK++K+ ++ Q +A
Sbjct: 64 AIASALLHDTVEDTNL-TLDDIETIFGPEVSRLVDGLTKLNKIRLSPDDEKDPKEQQAQA 122
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MFLAM E+ RV+++KLADRLHNMRT+ H+P KQ S A ETL+++APLA LG++
Sbjct: 123 ENLRKMFLAMVEDPRVVLIKLADRLHNMRTIEHLPRDKQLSKARETLEIYAPLAGRLGIF 182
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+ +SELE+LSF + Y ++ +V K +E+A +L K LD +
Sbjct: 183 KFRSELEDLSFKVLYPDKYREIAAQVERSGVTRGKYIEQAIDVLKKA------LDAEGIP 236
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YSIY+ + + + S +++ + LR+I CY LG
Sbjct: 237 AEITGRRKHLYSIYRKMEQKQRSFDQIFDVLGLRVI------------TDEVMQCYAALG 284
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
++H IW PIP DYIA PK + YQSLHT ++ + LE+QIRT +M +AE GI
Sbjct: 285 VIHSIWRPIPGEFDDYIAMPKESMYQSLHTAVVGLDGKP---LEIQIRTRDMHEVAEYGI 341
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+ R GK N RI+WL + EW++E ++
Sbjct: 342 AAHW-----------------RYKEGKKA---NEAAEHRITWLRQLLEWRDEVA---DAQ 378
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFV+++ DLL ++VFTP G++ LP+GAT +D+AY IHTEIG+ V A VNG LVS
Sbjct: 379 EFVESMKSDLLQEHIYVFTPNGDVVELPRGATPIDFAYRIHTEIGHHCVGATVNGRLVSL 438
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 660
+VL N +VV+I T SK+ + WL + +T SAR KI ++ R+Q
Sbjct: 439 DYVLQNGDVVKIRT-----SKTKQGPSRDWLNPAYGYVRTASAREKIRQWFRKQ 487
>gi|257416410|ref|ZP_05593404.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|422695354|ref|ZP_16753342.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
gi|257158238|gb|EEU88198.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|315147637|gb|EFT91653.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
Length = 737
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ P +ELV++AL A +AH+GQ R+SGEP+IIHP++VA IL EL +D ++A G LH
Sbjct: 18 TYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG + +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGEDIAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N Y ++ + E E + EA + + ED + + EI K
Sbjct: 190 TALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATED------LEIYAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + NE+ + +R+I+ + CY VLG +H WTP
Sbjct: 244 HIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I +EVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANMYQSIHTTVIG---PKGNPVEVQIRTHEMHQIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++ W + I E Q+E + + EF+ +
Sbjct: 348 ----------------EGKAEKIETDELTKQVDWFHEIIELQDE---SYDASEFMQGVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP G++ LPKG+ +D+AY IHTEIGNK AKVNG +V +VL N +
Sbjct: 389 DIFSDKVYVFTPSGDVTELPKGSGPLDFAYSIHTEIGNKTTGAKVNGKMVQLDYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T S ++F + WL+ KT A++KI +F +EQ
Sbjct: 449 IIEVLT-----SPNSFGPSRDWLKMVKTSKAKNKIKRFFKEQ 485
>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
Length = 732
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 311/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS ++ + RA A +AH+GQ R+SGE +IIHP++VA IL +L++D E+IA G LH
Sbjct: 18 SYLSEEDIHFIIRAYQYAEKAHEGQFRKSGEAYIIHPIQVAGILVDLKMDPETIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T E IEEEF V +V+G V+KLGK+K K S + +A++ R+MF+
Sbjct: 78 DVVEDTDI-TLEMIEEEFNKEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+PP KQ A ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPPEKQRIKANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ L K+ + +++++ D L+ + ++ EI K
Sbjct: 190 TALRYLNPQQYY----RIVQLMKQKRDQRVSYIDEVIQEVSDQ--LEELNIEAEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K NE+ + +R+ L + + CY VLG++H W P
Sbjct: 244 HLYSIYQKMVKQNKQFNEIYDLLAVRV------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + ++SW I EWQ E + EFV+++
Sbjct: 348 ----------------EGKQINNDKKTFEEKLSWFREILEWQNE---THDAEEFVESLKI 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D+AY IHTEIGN+ + AK+NG + + L N +
Sbjct: 389 DLFSDMVYVFTPKGDVIELPSGSIPLDFAYRIHTEIGNQTIGAKINGKMEPLDYQLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++E++T SK ++ + WL+ +T A++KI +F ++Q
Sbjct: 449 IIEVLT-----SKHSYGPSQDWLKITQTSQAKNKIRQFFKKQ 485
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 312/528 (59%), Gaps = 67/528 (12%)
Query: 139 SYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
Y+ N L+L+ +A A +AH+GQ R SGEP+I+HPVEVA IL +LELD +IAAGLL
Sbjct: 13 QYMGENANLDLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLL 72
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD +EDT V T++++ EEFG + +V+G V+KLGK++ K++ +A+++R+M
Sbjct: 73 HDVIEDTGV-TYDQLMEEFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKML 124
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
+AM +++RVI++KLADRLHNMRTL ++PP KQ A ETL+++AP+A LG+ +IK ELE
Sbjct: 125 IAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELE 184
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
+L Y + E+Y + +VA KE E+ ++ + +K LD M + E+
Sbjct: 185 DLCLRYLHPEEYYDLVEKVAAKRKEREEFIQNIIATIKQK------LDEMGIPAEVDGRP 238
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIYK + + E+ + +RII+ + + CY VLG+VH +W
Sbjct: 239 KHFYSIYKKMKTQNKTFEEIYDLLAIRIIV------------NTVKDCYGVLGIVHTLWK 286
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAA 492
PIP KDYIA PKPN YQSLHTT+I PF EVQIRT EM AE GIAA
Sbjct: 287 PIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EVQIRTWEMHKTAEYGIAA 338
Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
H+ R GKT ++ WL + EWQ+E +EF
Sbjct: 339 HW-----------------RYKEGKT---TEDEFDKKLVWLRQLLEWQKEL---KDPKEF 375
Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
++T+ DL VFVFTP+G++ +LP G+T +D+AY IHTEIG++M AKVNG +V +
Sbjct: 376 METLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRMNGAKVNGRIVPINY 435
Query: 613 VLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L ++VEI+ +S + WL+ KT AR+KI ++ +++
Sbjct: 436 QLKTGDIVEIL----VSPNKDRGPSRDWLQIVKTSQARNKIRQWFKKE 479
>gi|407980717|ref|ZP_11161494.1| GTP diphosphokinase [Bacillus sp. HYC-10]
gi|407412525|gb|EKF34317.1| GTP diphosphokinase [Bacillus sp. HYC-10]
Length = 736
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 308/521 (59%), Gaps = 52/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ + RA A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD
Sbjct: 19 YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTDV-TLEDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K E EE ++ +++D + + +K E K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RI L + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH+
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ T A ++SW I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 452 IEILT-----SKHSYGPSQDWIKLAQTSQAKHKIRQFFKKQ 487
>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
Length = 730
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 310/523 (59%), Gaps = 54/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY++ ++ VRRA LA EAH Q R SGEP+I+HPV+VA IL +L++D E+++AG LH
Sbjct: 18 SYMNEEHVDFVRRAYELAREAHKEQFRSSGEPYIVHPVQVAGILADLQMDPETVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T + + E+FG V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTEV-TRDDLVEQFGEEVAMLVDG---VTKLGKIKYK----SKKEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ +L K E E K +M +I L + ++ E+ K
Sbjct: 190 TALRYLNPQQYY----RIVNLMKRKRTEREAYLKNVMDEIHGQ--LGDVDIQAELSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + NE+ + +R+ L + CY VLG+VH +W P
Sbjct: 244 HIYSIYKKMQSQHKQFNEIYDLLAIRV------------LVDSIKDCYAVLGIVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTNEMHNIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK ++I +++W I E+Q V N + EF++++
Sbjct: 348 ----------------EGKNAATEKSDIDSKLTWFREILEFQS--VSN-DAEEFMESLKF 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VF+P+G++ LP G+ +D+AY +H+EIGN+ + AKVNG +V L +
Sbjct: 389 DLFSDMVYVFSPKGDVLELPAGSVPIDFAYRVHSEIGNRTIGAKVNGKMVPLDTPLETGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VE+IT SK +F + WL A++ A+HKI +F ++QA
Sbjct: 449 IVEVIT-----SKQSFGPSRDWLSIAQSSQAKHKIKQFFKKQA 486
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 310/521 (59%), Gaps = 51/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+P ++E VR A A EAH QKR SGEP+IIHP+ VA IL +L++D ++AA LHD
Sbjct: 21 YLTPRQVEFVREAYNFAAEAHAKQKRASGEPYIIHPLGVASILAQLQMDDVTLAAAFLHD 80
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +++E+ FG V +V+G V+KLGK+ E S ++ + ++ R+MFLA
Sbjct: 81 VVEDTEV-TLDQMEDIFGREVAMLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRT+ MP +KQ I++ETL+++APLA LG+Y IK ELE+L
Sbjct: 133 MAKDIRVVLIKLADRLHNMRTMKFMPVNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y + Y ++ +V E E ++EA L K E+ + +I+ K
Sbjct: 193 AFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELRKLCEES------GINCQIQGRPKS 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + + +INE+ + +R+ L + CY VLG+VHG W PI
Sbjct: 247 FYSIYKKMQRDHKTINEIYDLLAVRV------------LVDTVKDCYGVLGIVHGKWKPI 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT++ S LE+QIRT EM ++E G+AAH+ +
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHKVSEYGVAAHWRYK-- 349
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
S K ++ N+ +++WL + EW ++ EFVDT+ D
Sbjct: 350 ------------ESGGSKMPSSSDKNVDAKMAWLRQLLEWHKDM---RDPHEFVDTVKMD 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ VFVFTP+G++ +LP+G+ +D+AY +HT +GN V AKVNG +V + L N ++
Sbjct: 395 VFSDEVFVFTPQGDVLDLPEGSVPIDFAYRVHTGVGNSCVGAKVNGKIVPLDYHLKNGDI 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT SKS+ + W+ + ++KI +F +++
Sbjct: 455 VEIIT-----SKSSPGPSRDWINIVGSSQTKNKIKQFFKKE 490
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 312/528 (59%), Gaps = 67/528 (12%)
Query: 139 SYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
Y+ N L+L+ +A A +AH+GQ R SGEP+I+HPVEVA IL +LELD +IAAGLL
Sbjct: 11 QYMGENANLDLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLL 70
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD +EDT V T++++ EEFG + +V+G V+KLGK++ K++ +A+++R+M
Sbjct: 71 HDVIEDTGV-TYDQLMEEFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKML 122
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
+AM +++RVI++KLADRLHNMRTL ++PP KQ A ETL+++AP+A LG+ +IK ELE
Sbjct: 123 IAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELE 182
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
+L Y + E+Y + +VA KE E+ ++ + +K LD M + E+
Sbjct: 183 DLCLRYLHPEEYYDLVEKVAAKRKEREEFIQNIIATIKQK------LDEMGIPAEVDGRP 236
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIYK + + E+ + +RII+ + + CY VLG+VH +W
Sbjct: 237 KHFYSIYKKMKTQNKTFEEIYDLLAIRIIV------------NTVKDCYGVLGIVHTLWK 284
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAA 492
PIP KDYIA PKPN YQSLHTT+I PF EVQIRT EM AE GIAA
Sbjct: 285 PIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EVQIRTWEMHKTAEYGIAA 336
Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
H+ R GKT ++ WL + EWQ+E +EF
Sbjct: 337 HW-----------------RYKEGKT---TEDEFDKKLVWLRQLLEWQKEL---KDPKEF 373
Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
++T+ DL VFVFTP+G++ +LP G+T +D+AY IHTEIG++M AKVNG +V +
Sbjct: 374 METLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRMNGAKVNGRIVPINY 433
Query: 613 VLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L ++VEI+ +S + WL+ KT AR+KI ++ +++
Sbjct: 434 QLKTGDIVEIL----VSPNKDRGPSRDWLQIVKTSQARNKIRQWFKKE 477
>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
Length = 774
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/544 (39%), Positives = 325/544 (59%), Gaps = 62/544 (11%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SPE+L+++L ++ P+ ++ L+ +A +A +AH+GQ R+SGEP+IIHP+ VA IL
Sbjct: 33 ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 92
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD E+I AGLLHD VEDT V+T E+I +EFG V +V+G V+KLG+L +
Sbjct: 93 ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 148
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+
Sbjct: 149 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 205
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK EL++LS Y + Y + ++A ++ +++ + + + I+D
Sbjct: 206 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 262
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ ++ K +SIYK ++ +++++ + +RII+ +
Sbjct: 263 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 307
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIR
Sbjct: 308 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 359
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + A NG + TV ++SWL I E
Sbjct: 360 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 406
Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N +EF+ + R DL VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 407 WQRDMSDN---KEFMSLLKRDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 463
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM+ AKVNG LV +++ N + VE+IT S+++ + WL K+ A++KI ++
Sbjct: 464 KMIGAKVNGKLVPIDYIIQNGDRVEVIT-----SQNSKGPSRDWLNIVKSTQAKNKINQW 518
Query: 657 LREQ 660
R +
Sbjct: 519 FRSE 522
>gi|228923159|ref|ZP_04086450.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423582615|ref|ZP_17558726.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|423634768|ref|ZP_17610421.1| GTP pyrophosphokinase [Bacillus cereus VD156]
gi|228836538|gb|EEM81888.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401213494|gb|EJR20235.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|401278754|gb|EJR84684.1| GTP pyrophosphokinase [Bacillus cereus VD156]
Length = 727
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE + +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLEEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|415885635|ref|ZP_11547563.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
gi|387591304|gb|EIJ83623.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
Length = 731
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 318/524 (60%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ + LV++A A AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 16 TRKYLNEEHVNLVKKAYEFARAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD +EDT+V T E + E F V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVIEDTDV-TLEEMREAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y R+ +L K+ E E+ +++++ + L+ +++K EI
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLDDVIEEVRNR--LNEVSIKAEISGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + NE+ + +RI++ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH++
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHRIAEYGIAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+V N++ +++W I E+Q + + EF++++
Sbjct: 347 K-----------------EGKSVN-ENSSFEEKLTWFREILEFQND---TANAEEFMESL 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLQT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK ++ + WL+ A+T A++KI +F ++Q
Sbjct: 446 GDIVEILT-----SKHSYGPSQDWLKLAQTSQAKNKIRQFFKKQ 484
>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 776
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 220/557 (39%), Positives = 326/557 (58%), Gaps = 69/557 (12%)
Query: 126 SPERLWEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L + Y ++ ++ +A +A EAH+GQKR+SGEP+IIHP+ VA IL +
Sbjct: 40 SPEVLYKELINSVLKYHPSTDISMIEKAYKVASEAHEGQKRKSGEPYIIHPLCVAIILAD 99
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT +T+E +E+EFG+ V +V+G V+KLG+L +
Sbjct: 100 LELDKETIVAGLLHDAVEDT-WMTYEEVEKEFGSEVALLVDG---VTKLGQLSYSADKVE 155
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 156 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 212
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +VA E E+ + K + K ++D
Sbjct: 213 MRLGISKIKVELDDLSLKYLKPDVYYDLVHKVALRKSEREQFVGAIVKEVKKHMDD---- 268
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K ++ K +SIYK ++ +I+++ + +RI L +
Sbjct: 269 --ANIKAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 314
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 315 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 366
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G++P GK+ +++WL I EW
Sbjct: 367 YEMHRTAEYGIAAHWKYK---------ESSDGKAPVGKSE-------EEKLNWLRQILEW 410
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N +EF+ + DL V+ FTP+G++K LP G+T VD+AY +H+ +GNK
Sbjct: 411 QRDMSDN---KEFMSLLKNDLDLFADSVYCFTPQGDVKTLPSGSTPVDFAYSVHSAVGNK 467
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI---- 653
MV A+VNG LV + + N + +EIIT S+++ + WL+ K+ A++KI
Sbjct: 468 MVGARVNGKLVPIEYEIKNGDRIEIIT-----SQNSQGPSRDWLKLVKSTQAKNKINQWF 522
Query: 654 MKFLREQAALSASEITA 670
K L+E L E+ A
Sbjct: 523 KKELKEDNILKGKEMLA 539
>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
Length = 733
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 307/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL + + RA A +AH Q R+SGEP+I+HPV+VA IL +LE+D +IA G LH
Sbjct: 18 GYLLEEDAVFLHRAYEFAEDAHKDQFRKSGEPYIVHPVQVAGILVDLEMDPVTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E++E+ F V +V+G V+KLGK+K K S + ++A++ R+MF+
Sbjct: 78 DVVEDTEV-TLEQLEDSFNEEVAMLVDG---VTKLGKIKYK----SKEALQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RVI++KLADRLHNMRTL H+PP+KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMARDIRVILIKLADRLHNMRTLKHLPPNKQRRISNETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + + +E E ++E L K+++D + ++ +I K
Sbjct: 190 TALRYLNPQQYYRIVQLMKQKREERETYIDEVIDELEKQLDD------VNIEADISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + K NE+ + +RI L + CY VLG++H W P
Sbjct: 244 HLYSIYRKMAKQNKQFNEIYDLLAVRI------------LVHSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + + + R++W I +WQ E + EF++T+
Sbjct: 348 ----------------EGKQLAKGSKSFEDRLTWFREILDWQSE---THDAEEFMETLKV 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D+AY IHTE+GNK + AKVNG + + L N +
Sbjct: 389 DLFSDMVYVFTPKGDVIELPSGSVPLDFAYRIHTEVGNKTIGAKVNGKMEPLDYQLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VE++T SK ++ + WL +T A+ KI +F ++Q
Sbjct: 449 IVEVMT-----SKHSYGPSQDWLSITQTSQAKSKIKQFFKKQ 485
>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
Length = 730
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/523 (39%), Positives = 313/523 (59%), Gaps = 54/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY++ + V+RA LA +AH Q R SGEP+I+HP++VA IL EL++D E+++AG LH
Sbjct: 18 SYMNDEHVAFVQRAYELARDAHKEQFRSSGEPYIVHPIQVAGILAELQMDPETVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T E + E+FG V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTSV-TREDLVEQFGEEVAMLVDG---VTKLGKIKYK----SKKEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ +L K E E + +M +I + LD +++ ++ K
Sbjct: 190 TALRYLNPQQYY----RIVNLMKRKRTEREAYLQNVMDEITEQ--LDDVSIPADLSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY + NE+ + +R+I+ + CY VLG+VH +W P
Sbjct: 244 HIYSIYNKMQSQHKQFNEIYDLLAVRVIV------------DSIKDCYAVLGIVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+ M IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKSMHNIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK+ N +I +++W I E+Q E + + EF++++
Sbjct: 348 ----------------EGKSAVTENTDIDSKLTWFREILEFQNE---SNDAEEFMESLKF 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VF+P+G++ LP G+ +D+AY +H+EIGN+ + A+VNG +V L +
Sbjct: 389 DLFSDMVYVFSPKGDVLELPAGSVPIDFAYRVHSEIGNRTIGARVNGKMVPLDTPLETGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VE+IT SK +F + WL A++ A+HKI +F ++QA
Sbjct: 449 IVEVIT-----SKQSFGPSRDWLSIAQSSQAKHKIKQFFKKQA 486
>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 725
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 313/523 (59%), Gaps = 55/523 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+P ++E VR A A E H QKR SGEP+IIHP+ VA IL +L +D ++AA LHD
Sbjct: 6 YLTPRQVEFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHD 65
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T +++ + FG V +V+G V+KLGK+ E S ++ + ++ R+MFLA
Sbjct: 66 VVEDTDV-TLDQLTDIFGLEVAGLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 117
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRT+ +MPP+KQ I++ETL+++APLA LG+Y IK ELE+L
Sbjct: 118 MAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 177
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKE--LEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
SF Y + Y ++ +V K HE+E ++EA L D +K EI+
Sbjct: 178 SFRYMEPQHYYELVEQVK--VKRHEREAMVQEAMDELSHLCSDS------GIKCEIQGRP 229
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIYK + K SINE+ + +R+ L + CY VLG+VHG W
Sbjct: 230 KSFYSIYKKMQKDNKSINEIYDLLAVRV------------LVDSVKDCYGVLGIVHGKWR 277
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
PIP KDYIA PK NGYQSLHTT++ S LE+QIRT EM I+E G+AAH+ R
Sbjct: 278 PIPGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHRISEYGVAAHW--R 332
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+G G P+ ++ + +++WL + +W + EFVDT+
Sbjct: 333 YKESG--GSNMPSS----------SDKSADEKMAWLRQLLDWHRDM---RDPHEFVDTVK 377
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ VFVFTP+G++ +LP G+ +D+AY IHT +GN+ V AK+NG +V + L N
Sbjct: 378 MDVFSDEVFVFTPQGDVIDLPFGSVPIDFAYRIHTGVGNRCVGAKINGKIVPLDYKLKNG 437
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEIIT SK++ + W+ + ++KI +F +++
Sbjct: 438 DIVEIIT-----SKTSPGPSRDWINIVGSSQTKNKIRQFFKKE 475
>gi|398307316|ref|ZP_10510902.1| RelA/SpoT family protein [Bacillus vallismortis DV1-F-3]
Length = 734
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V RA + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVERAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E +EE + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VHIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAASEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|194017102|ref|ZP_03055714.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
ATCC 7061]
gi|194010970|gb|EDW20540.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
ATCC 7061]
Length = 736
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 308/521 (59%), Gaps = 52/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ + RA A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD
Sbjct: 19 YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTDV-TLQDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K E EE ++ +++D + + +K E K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RI L + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH+
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ T A ++SW I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 452 IEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 487
>gi|157693164|ref|YP_001487626.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
gi|157681922|gb|ABV63066.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
Length = 736
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 308/521 (59%), Gaps = 52/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++ + RA A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD
Sbjct: 19 YLSAEHIQFIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTDV-TLQDLKEHFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K E EE ++ +++D + + +K E K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYLDEVVNEVKDR--VSEVNIKAEFSGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RI L + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRI------------LVDSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH+
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTVEMHEIAEYGIAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ T A ++SW I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKESAEST---EEAVFQKKLSWFREILEFQNE---STDAEEFMESLKID 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L ++
Sbjct: 392 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 452 IEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 487
>gi|410459965|ref|ZP_11313653.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
gi|409927803|gb|EKN64929.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
Length = 733
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 306/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL ++ V A A AH Q R+SGEP+IIHP++VA IL ELE+D ++AAG LHD
Sbjct: 19 YLPKEDVAFVEAAYKYAEAAHSEQYRKSGEPYIIHPIQVAGILAELEMDPVAVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T + +E F V +V+G V+KLGK+K K S + +A++ R+MF+A
Sbjct: 79 VVEDTEV-TLKDLEVAFNKEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+PP KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y ++ + + E E ++ E + K+ LD + +K +I K
Sbjct: 191 ALRYLNPQQYYRIVNLMKNKRAERENQVHEVIDEIRKR------LDEVHLKADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +R+ L + CY VLG++H W P+
Sbjct: 245 IYSIYRKMVLQNKQFNEIYDLLAVRV------------LVESIKDCYAVLGVIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRT EM IAE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTTEMHQIAEYGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + N N+ +++W I EWQ++ + EF++++ D
Sbjct: 348 ---------------EGKQITQNRENLQEKMTWFREILEWQQD---TNDAEEFMESLKID 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP+G+ +D+AY IHTEIGNK + +KVNG +V HVL ++
Sbjct: 390 LFSDMVFVFTPKGDVYELPRGSNPIDFAYRIHTEIGNKTIGSKVNGKMVPLDHVLKTGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK +F + W++ +T A++KI +F ++Q
Sbjct: 450 IEILT-----SKQSFGPSQDWIKICQTSQAKNKIRQFFKKQ 485
>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
saccharolyticum K10]
Length = 761
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 330/545 (60%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL +I P +++ +V +A LAFEAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEELYQDLIASIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AG+LHD VEDT V+T + + EFGA V +V+G TK++ + K K E
Sbjct: 82 LELDKETIVAGILHDVVEDT-VMTTDGLAREFGAEVALLVDGVTKLTNISWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 138 ---MQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK+EL++L+ Y E Y ++ +++ L K +A + +K I D+
Sbjct: 195 DRLGISRIKTELDDLALKYLEPEVYYELSEKIS-LRK-------DAREAFVKGIVDEVKS 246
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+D ++ ++ K +SIYK ++K +++++ + +RII+
Sbjct: 247 HMDDAGIECKVDGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIV------------DTV 294
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QI
Sbjct: 295 KDCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPF--------EIQI 346
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM +AE GIAAH+ + +G + +++A ++SWL I
Sbjct: 347 RTYEMHRVAEYGIAAHWK-----------YKESGST----KAAMDSAE--EKLSWLRQIL 389
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ++ N +EF+D++ DL VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 390 EWQKDMSDN---KEFLDSLKSDLDLFSDSVFCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 446
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV AKVNG LV+ + + N + +EI+T S+++ + WL+ K+ A++KI +
Sbjct: 447 NKMVGAKVNGMLVNIDYEIKNGDRIEILT-----SQNSKGPSRDWLKIVKSTQAKNKINQ 501
Query: 656 FLREQ 660
+ + +
Sbjct: 502 WFKAE 506
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/532 (40%), Positives = 308/532 (57%), Gaps = 59/532 (11%)
Query: 130 LWEDLRPTISYLSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E+L + +P E L+R+A A H GQ+R SGEPF+ HPV VARIL ELELD
Sbjct: 3 LYEELLAQVKAYNPGVNEALLRKAFDFAQAKHAGQRRFSGEPFLSHPVAVARILAELELD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
E+I AGLLHD VEDT T E IE EFGA + +V+G TK+S+L + S ++
Sbjct: 63 TETIVAGLLHDVVEDTGT-TLEEIEHEFGAEIAALVDGVTKLSRL-------QFRSQEEQ 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++LR+MF+AM ++VRV+++KLADRLHN+RTL ++PP KQ +IA ETL++FAPLA LG
Sbjct: 115 QAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPPEKQRAIAKETLEIFAPLAHRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y++K ELE+L+F Y E Y ++ +VA E+ E IL K++E+
Sbjct: 175 IYRLKWELEDLAFRYLEPERYRELAAKVAKTRAAREEYTRELIAILQKRLEE------AG 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K E+ K YSIY+ +L+ +E+ +G+ L + CY V
Sbjct: 229 IKAELMGRPKNLYSIYQKMLRDGKEYSEIYD------------RTGIRALVETVRDCYAV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG+VH +W P+P KDYIA PK N YQSLHTT+I E +EVQIRT EM AE
Sbjct: 277 LGVVHTLWKPVPGRFKDYIAMPKENMYQSLHTTVIGPQGEP---VEVQIRTYEMHRTAEY 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ R G+T + + + +WL + EW +E
Sbjct: 334 GIAAHW-----------------RYKEGQT---RDKQLEAKFAWLRELLEWVQEM---RD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+REF++ + D+ VFVFTP+G++ LP GA +D+AY IHTE+G++ AKVNG LV
Sbjct: 371 AREFMERLKIDVFSDVVFVFTPKGDVVELPAGAVPLDFAYRIHTEVGHRYKGAKVNGRLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L ++VEIIT + + WL +T AR +I ++ + +
Sbjct: 431 PLDYQLKTGDIVEIITGPKPNPS------RDWLNVVRTSQARSRIRQWFKRE 476
>gi|442804848|ref|YP_007372997.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740698|gb|AGC68387.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 759
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 314/518 (60%), Gaps = 67/518 (12%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A A AH+GQKR SGEPF+IHP++VA IL E+E+D ++ AG+LHDTVED++
Sbjct: 55 LIEKAYKFACIAHEGQKRSSGEPFVIHPLQVAYILAEMEMDTATVVAGMLHDTVEDSSF- 113
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T+E + FG + +V+G V+KL K+ N+ Q+++A++LR+MFLAM++++RVI
Sbjct: 114 TYENTLKNFGEEIANLVDG---VTKLAKIPYTNK----QEIQAENLRKMFLAMSKDIRVI 166
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
I+KLADRLHNMRTL + P KQ IA ETL ++APLA LG+Y++K ELE+LSF Y + +
Sbjct: 167 IIKLADRLHNMRTLKYKPREKQIEIAQETLDIYAPLAHRLGIYKVKWELEDLSFRYLHEK 226
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+Y + ++A KE E+ +E K + +K + M ++ I K YSIY +
Sbjct: 227 EYYDLAEKIAKKRKEREEYIENIMKTVAEKAME------MGIEAHIDGRPKHLYSIYMKM 280
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ ++++ + +R+I+ + + CY VLGLVH ++ P+P KDYI
Sbjct: 281 KRQHKELDQIYDLFAIRVIV------------NTVKDCYAVLGLVHELYKPMPGRFKDYI 328
Query: 448 ATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
+ PKPN YQSLHTT+ IPF EVQIRT EM IAE GIAAH+
Sbjct: 329 SMPKPNMYQSLHTTVIGPEGIPF--------EVQIRTWEMHRIAEVGIAAHWK------- 373
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ GR N +++ +++WL + +WQ+E EF++ + DL
Sbjct: 374 ----YKEGGRQ---------NDDLSEKLAWLRQLLDWQKE---TTDPDEFMENLKIDLFT 417
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
VFVFTP+G++K L G+T +D+AY IH++IGN+M+ AKVNG + S + L N ++VEI
Sbjct: 418 DEVFVFTPKGDVKCLKAGSTPIDFAYAIHSDIGNRMIGAKVNGRIESLDYELKNGDIVEI 477
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
IT S ++ + WL+ KT AR+KI ++ +++
Sbjct: 478 IT-----SATSKGPSRDWLKKVKTSQARNKINQWFKKE 510
>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
Length = 732
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 310/521 (59%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL ++ + RA A AH Q R+SGEP+IIHP++VA IL +L+LD +IAAG LHD
Sbjct: 19 YLKGEDIAFLERAYEFAKNAHAEQYRKSGEPYIIHPIQVAGILVDLDLDPSTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E I+E F A V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTSV-TLEEIKEAFNAEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ +L K E EE +M ++ D L+ + + E+ K
Sbjct: 191 ALRYLNPQQYY----RIVNLMKRKRAEREEYISEVMNEVNDR--LEEVEITAELSGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + K +E+ + +RII+ + + CY VLG++H W P+
Sbjct: 245 IYSIYRKMAKQNKQFSEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT +M IAE GIAAH++
Sbjct: 293 PGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTSDMHQIAEYGIAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ + A+ +++W I EWQ + + EF++++ D
Sbjct: 346 --------------YKEDKEADDRASFEEKLTWFREILEWQNDATN---AEEFMESLKID 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L ++
Sbjct: 389 LFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ + WL+ A+T A+++I +F ++Q
Sbjct: 449 IEILT-----SKHSYGPSQDWLKLAQTSQAKNRIRQFFKKQ 484
>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
iheyensis HTE831]
Length = 734
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 315/522 (60%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YLS +++ L+ +A A +AH Q R+SGEP+IIHPV+VA IL +L++D E+I+AG LH
Sbjct: 18 TYLSEDDVALIEQAYEFASDAHKDQFRKSGEPYIIHPVQVAGILADLQMDSETISAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T E++EE F + +V+G V+KLGK++ + + +A++ R+MF+
Sbjct: 78 DVVEDTDV-TVEQLEEAFNHEIAMLVDG---VTKLGKIRYETKEAQ----QAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+ P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAKDIRVIMIKLADRLHNMRTLKHLAPEKQRRISNETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ L K+ +E E + ++ ++ + LD + ++ E+ K
Sbjct: 190 TALRYLNPQQYY----RIVQLMKQKREERESYIQEVIDELALE--LDTVNIEAEMSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + NE+ + +RI L + CY VLG++H W P
Sbjct: 244 HLYSIYQKMVKQKKQFNEIYDLLAVRI------------LVENIKDCYAVLGIIHTNWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHDIAEYGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ R K+ + ++SW I EWQ E + EF++++
Sbjct: 345 --------AYKEGKTSREKS------SFEEKLSWFREILEWQSE---THDAEEFIESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+GE+ LP G+ +D+A+ IHTEIGNK + +K+NG + + L N +
Sbjct: 388 DLFSDMVYVFTPKGEVIELPSGSIPLDFAFKIHTEIGNKTIGSKINGKMEPLDYELQNGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VE++T SK ++ + WL+ +T A+ KI +F ++Q
Sbjct: 448 IVEVMT-----SKHSYGPSQDWLKMVQTSQAKSKIKQFFKKQ 484
>gi|152976825|ref|YP_001376342.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
gi|152025577|gb|ABS23347.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
Length = 727
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 312/525 (59%), Gaps = 62/525 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ +++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEV-TLEDIEREFSKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I++ L+ +++ +I K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTSIQEK--LNEVSIHPDISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS--- 495
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYKE 348
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
G+ TG + +++W I EWQ E + EF+++
Sbjct: 349 GKAAATG----------------------TLEKKLTWFRQILEWQNE---ASNAEEFMES 383
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L
Sbjct: 384 LKIDLFSDMVFVFTPKGDVMELPMGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLK 443
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 444 TGDIIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 483
>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
Length = 722
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 217/522 (41%), Positives = 306/522 (58%), Gaps = 58/522 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ L+LV++ LA EAH GQ R SGEPF+ HP+ VA+IL ELELD SI A LLH
Sbjct: 12 SYIEDPNLDLVKKGYYLAKEAHQGQMRVSGEPFLSHPLRVAQILAELELDVVSITAALLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T + IEEEFGA +R +V G TK++K+ K + E+ +A LR+MFL
Sbjct: 72 DVVEDTEI-TADEIEEEFGAEIRLLVNGVTKLNKID-FKTREEH------QAASLRKMFL 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV+++KLADRLHNMRTL+++ K+ A ETL+++APLA LGM ++K ELE+
Sbjct: 124 AMAEDIRVVLIKLADRLHNMRTLNYLSEEKRKRKANETLEIYAPLAHRLGMSRLKWELED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y + Y ++ ++A E E +E+ L K+ED + ++ +I K
Sbjct: 184 LSFRYLEPDKYHELANKLAKNRAEREAYIEDVIDTLEGKLED------VDIQGKIYGRPK 237
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI + ++ S +E+ + LR+I+ + CY VLG++H IW P
Sbjct: 238 HLYSINQKIINKNKSFDEIYDLTALRVIV------------DSVKECYQVLGILHEIWNP 285
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P +KDYIA PK N YQSLHTT+I E LE+QIRT EM AE GIAAH+
Sbjct: 286 MPGRIKDYIAMPKSNMYQSLHTTVIGPKGEP---LEIQIRTWEMHRTAEYGIAAHW---- 338
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
R K + + +ISWL + EWQ + +REF++ +
Sbjct: 339 ----------------RYKDGNPEDDDFEKKISWLRQLLEWQHDL---KDAREFMENLKI 379
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
+L VFVFTP+G++ LPKGAT VD+AY IHT++G+ V AKVNG ++ + L N +
Sbjct: 380 ELFEDEVFVFTPKGDVMPLPKGATPVDFAYHIHTDVGHTCVGAKVNGKMIPLEYRLDNGD 439
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SS S R WL +T A+ KI K+ + Q
Sbjct: 440 IIEILT----SSDSGPSR--DWLNFVQTSRAKSKIKKWFKVQ 475
>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
str. A1055]
gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
Length = 727
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 727
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
XB6B4]
Length = 770
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 324/544 (59%), Gaps = 62/544 (11%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SPE+L+++L ++ P+ ++ L+ +A +A +AH+GQ R+SGEP+IIHP+ VA IL
Sbjct: 29 ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 88
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD E+I AGLLHD VEDT V+T E+I +EFG V +V+G V+KLG+L +
Sbjct: 89 ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 144
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+
Sbjct: 145 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 201
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK EL++LS Y + Y + ++A ++ +++ + + + I+D
Sbjct: 202 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 258
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ ++ K +SIYK ++ +++++ + +RII+ +
Sbjct: 259 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 303
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIR
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 355
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + A NG + TV ++SWL I E
Sbjct: 356 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 402
Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N +EF+ + DL VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 403 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 459
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM+ AKVNG LV +++ N + VE+IT S+++ + WL K+ A++KI ++
Sbjct: 460 KMIGAKVNGKLVPIDYIIQNGDRVEVIT-----SQNSKGPSRDWLNIVKSTQAKNKINQW 514
Query: 657 LREQ 660
R +
Sbjct: 515 FRSE 518
>gi|229086970|ref|ZP_04219127.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
gi|228696346|gb|EEL49174.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
Length = 728
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ +++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KL+DRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLSDRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I D L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIRDK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAEA------TGTLEKKLTWFRQILEWQNE---TSNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
Length = 727
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
Length = 727
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|42783537|ref|NP_980784.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|384182226|ref|YP_005567988.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402555460|ref|YP_006596731.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
gi|42739466|gb|AAS43392.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|324328310|gb|ADY23570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401796670|gb|AFQ10529.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
Length = 727
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE + +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLEEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETAGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
Length = 740
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 309/521 (59%), Gaps = 51/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+P ++E VR A A E H QKR SGEP+IIHP+ VA IL +L +D ++AA LHD
Sbjct: 21 YLTPRQVEFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHD 80
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T +++ + FG V +V+G V+KLGK+ E S ++ + ++ R+MFLA
Sbjct: 81 VVEDTDV-TLDQLTDIFGLEVAGLVDG---VTKLGKI----EYISREEQQVENYRKMFLA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRT+ +MPP+KQ I++ETL+++APLA LG+Y IK ELE+L
Sbjct: 133 MAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDL 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y + Y ++ +V E E ++EA L D +K EI+ K
Sbjct: 193 SFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELSHLCSDS------GIKCEIQGRPKS 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + K SINE+ + +R+ L + CY VLG+VHG W PI
Sbjct: 247 FYSIYKKMQKDNKSINEIYDLLAVRV------------LVDSVKDCYGVLGIVHGKWRPI 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT++ S LE+QIRT EM I+E G+AAH+ R
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTVVS---SSGQPLEIQIRTFEMHRISEYGVAAHW--RYK 349
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+G G P+ ++ + +++WL + +W + EFVDT+ D
Sbjct: 350 ESG--GSNMPSS----------SDKSADEKMAWLRQLLDWHRDM---RDPHEFVDTVKMD 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ VFVFTP G++ +LP G+ +D+AY IHT +GN+ V AK+NG +V + L N ++
Sbjct: 395 VFSDEVFVFTPPGDVIDLPFGSVPIDFAYRIHTGVGNRCVGAKINGKIVPLDYKLKNGDI 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT SK++ + W+ + ++KI +F +++
Sbjct: 455 VEIIT-----SKTSPGPSRDWINIVGSSQTKNKIRQFFKKE 490
>gi|19704814|ref|NP_604376.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296327789|ref|ZP_06870328.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|19715157|gb|AAL95675.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296155136|gb|EFG95914.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 725
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20 DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVATLVDGVTKLKTLPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM +IKSELE+++F Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDIAFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + D + +K E++ K YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LDIKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 445 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 488
>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
M50/1]
Length = 770
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 324/544 (59%), Gaps = 62/544 (11%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SPE+L+++L ++ P+ ++ L+ +A +A +AH+GQ R+SGEP+IIHP+ VA IL
Sbjct: 29 ESPEKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILA 88
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD E+I AGLLHD VEDT V+T E+I +EFG V +V+G V+KLG+L +
Sbjct: 89 ELELDKETIVAGLLHDVVEDT-VMTDEQIAQEFGDEVALLVDG---VTKLGQLSYDADKV 144
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+
Sbjct: 145 EVQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPI 201
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK EL++LS Y + Y + ++A ++ +++ + + + I+D
Sbjct: 202 AQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKD--- 258
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ ++ K +SIYK ++ +++++ + +RII+ +
Sbjct: 259 ---AGIPAQVDGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIV------------DSVK 303
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIR
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPF--------EIQIR 355
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + A NG + TV ++SWL I E
Sbjct: 356 TFEMHRTAEYGIAAHWKYK--------EASNNGGVSQPMTVTEEE-----KLSWLRQILE 402
Query: 539 WQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N +EF+ + DL VF FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 403 WQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPTGSTPIDFAYSIHSAVGN 459
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM+ AKVNG LV +++ N + VE+IT S+++ + WL K+ A++KI ++
Sbjct: 460 KMIGAKVNGKLVPIDYIIQNGDRVEVIT-----SQNSKGPSRDWLNIVKSTQAKNKINQW 514
Query: 657 LREQ 660
R +
Sbjct: 515 FRSE 518
>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291077138|gb|EFE14502.1| RelA/SpoT family protein [Clostridium sp. M62/1]
Length = 761
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 330/545 (60%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL +I P +++ +V +A LAFEAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEELYQDLIVSIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AG+LHD VEDT V+T + + EFGA V +V+G TK++ + K K E
Sbjct: 82 LELDKETIVAGILHDVVEDT-VMTTDGLAREFGAEVALLVDGVTKLTNISWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 138 ---MQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK+EL++L+ Y E Y ++ +++ L K +A + +K I D+
Sbjct: 195 DRLGISRIKTELDDLALKYLEPEVYYELSEKIS-LRK-------DAREAFVKGIVDEVKS 246
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+D ++ ++ K +SIYK ++K +++++ + +RII+
Sbjct: 247 HMDDAGIECKVDGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIV------------DTV 294
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QI
Sbjct: 295 KDCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPF--------EIQI 346
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM +AE GIAAH+ + +G + +++A ++SWL I
Sbjct: 347 RTYEMHRVAEYGIAAHWK-----------YKESGST----KAAMDSAE--EKLSWLRQIL 389
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ++ N +EF+D++ DL VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 390 EWQKDMSDN---KEFLDSLKSDLDLFSDSVFCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 446
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV AKVNG LV+ + + N + +EI+T S+++ + WL+ K+ A++KI +
Sbjct: 447 NKMVGAKVNGMLVNIDYEIKNGDRIEILT-----SQNSKGPSRDWLKIVKSTQAKNKINQ 501
Query: 656 FLREQ 660
+ + +
Sbjct: 502 WFKAE 506
>gi|228993146|ref|ZP_04153068.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
gi|228999195|ref|ZP_04158776.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|229006742|ref|ZP_04164376.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228754603|gb|EEM04014.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228760540|gb|EEM09505.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|228766605|gb|EEM15246.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
Length = 728
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ +++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I D L + ++ +I K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIRDK--LKEVAIQPDISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAEA------TGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|47529935|ref|YP_021284.1| GTP pyrophosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187297|ref|YP_030549.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|65321773|ref|ZP_00394732.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Bacillus anthracis str. A2012]
gi|165871974|ref|ZP_02216615.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167636486|ref|ZP_02394783.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|167640729|ref|ZP_02398989.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|170688669|ref|ZP_02879874.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|170709262|ref|ZP_02899682.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|177653959|ref|ZP_02936000.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190567043|ref|ZP_03019959.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227817185|ref|YP_002817194.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229602848|ref|YP_002868693.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|254684162|ref|ZP_05148022.1| GTP diphosphokinase [Bacillus anthracis str. CNEVA-9066]
gi|254736509|ref|ZP_05194215.1| GTP diphosphokinase [Bacillus anthracis str. Western North America
USA6153]
gi|254741547|ref|ZP_05199234.1| GTP diphosphokinase [Bacillus anthracis str. Kruger B]
gi|254751354|ref|ZP_05203391.1| GTP diphosphokinase [Bacillus anthracis str. Vollum]
gi|254757686|ref|ZP_05209713.1| GTP diphosphokinase [Bacillus anthracis str. Australia 94]
gi|386738296|ref|YP_006211477.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|421506659|ref|ZP_15953582.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|421638475|ref|ZP_16079071.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
gi|47505083|gb|AAT33759.1| GTP diphosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181224|gb|AAT56600.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|164712264|gb|EDR17800.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167511301|gb|EDR86687.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|167528079|gb|EDR90876.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|170125838|gb|EDS94745.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|170667355|gb|EDT18113.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|172081014|gb|EDT66092.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190562034|gb|EDV16003.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227006997|gb|ACP16740.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229267256|gb|ACQ48893.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|384388148|gb|AFH85809.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|401823652|gb|EJT22799.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|403394901|gb|EJY92141.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
Length = 727
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA +L +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
Length = 731
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 211/524 (40%), Positives = 317/524 (60%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ + LV +A A AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 16 TRKYLNEEHVNLVIKAYEFAKAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+V T E + E F V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTDV-TLEEMREAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y R+ +L K+ E E+ +++++ + L+ +++K EI
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLDEVIEEVRNR--LNEVSIKAEISGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + NE+ + +RI++ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH++
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHRIAEYGIAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+V N++ +++W I E+Q + + EF++++
Sbjct: 347 K-----------------EGKSVK-ENSSFEDKLTWFREILEFQND---TANAEEFMESL 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPAGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK ++ + WL+ A+T A++KI +F ++Q
Sbjct: 446 GDIVEILT-----SKHSYGPSQDWLKLAQTSQAKNKIRQFFKKQ 484
>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
Length = 735
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 310/529 (58%), Gaps = 56/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ SY +ELV++A A EAH GQ R SGE +I HP+ VA+IL +L++D +
Sbjct: 11 EIIKQIQSYQPDAPIELVQKAYAFAGEAHRGQYRVSGEEYITHPLGVAKILADLQIDALT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I+AGLLHD VEDT V T E IE++FG + +V+G TK+S++ E S ++ + +
Sbjct: 71 ISAGLLHDVVEDTPV-TLEEIEKQFGKEIAMLVDGVTKLSRM-------EYKSKEEQQLE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
R+MFLAM +++RV+++KLADRLHNMRTL +MPP KQ IA ETL++FAPLA LG++
Sbjct: 123 SYRKMFLAMAKDIRVVLIKLADRLHNMRTLKYMPPAKQKEIARETLEIFAPLANRLGIFS 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+L+F + E Y ++ +V +E E + EA KIL ++ L M +K
Sbjct: 183 IKWELEDLAFRFLEPEKYYELVEKVKQKRQEREALINEAIKILSER------LTAMGIKA 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI+ K YSIYK + K ++E+ ++ +R+I+ + CY LG+
Sbjct: 237 EIQGRPKHFYSIYKKMQKDNKDLSEIYDLSAVRVIV------------DTIKDCYAALGI 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W PIP KDYIA PK N YQSLHTT+I + LE+QIRT EM +E GIA
Sbjct: 285 VHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGLQGQP---LEIQIRTVEMHRTSEYGIA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + G G R + ++SWL + EW +E RE
Sbjct: 342 AHWR---YKEGGKGTDR----------------DFEQKLSWLRQLLEWHQEL---RDPRE 379
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++ + D+ VFVFTP+G++ +LP G+ +D+AY IHT++G++ V A+VNG +V
Sbjct: 380 FMEALKLDVFADEVFVFTPKGDVIDLPAGSVPIDFAYRIHTDVGHRCVGARVNGKIVPLE 439
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ LAN ++VEIIT S S WL + R+KI ++ +++
Sbjct: 440 YKLANGDIVEIITSKHSSGPSL-----DWLNIVGSPETRNKIRQWFKKE 483
>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 746
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 315/557 (56%), Gaps = 56/557 (10%)
Query: 119 SDAFKEDSPERLWE--DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SDA + P L D+ +S P+ +L+L+++A + + + H GQ R+SGEP+++HP
Sbjct: 11 SDATRYAGPSTLLRLNDILDRVSGYHPDPDLDLIKKAYVYSAKVHQGQIRKSGEPYLVHP 70
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
+EVA IL EL+LD S+ GLLHDT+EDT + T + I E FG + +V+G TK+S+
Sbjct: 71 LEVAGILAELKLDESSVVTGLLHDTIEDT-LATKKEISELFGLEIADLVDGVTKLSQFTA 129
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
+ E +A++ R+M +AM +++RV++VKLADR HNMRTL M P Q IA E
Sbjct: 130 ANTQEEK------QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDAMKPESQERIARE 183
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TL ++APLA LG+ IK+ELE LSF Y DY+++ +V+ +E E+ + E +I+
Sbjct: 184 TLDIYAPLANRLGIQWIKTELEELSFKYLRPADYSELNEKVSVRAREKERFVAEVVEIIR 243
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + +K ++ K YSIY+ + + ++ + R+I+
Sbjct: 244 RRLAE------AGMKADVSGRVKHVYSIYRKMRQLDVDFEQIQDVIGFRVIV-------- 289
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
CY LG VH +W P+P KDYIA PKPN YQSLHTT++ E R+EV
Sbjct: 290 ----DTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGE---RIEV 342
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT EM IAE G+AAH++ + GR +G + +A WL
Sbjct: 343 QIRTREMHRIAEEGVAAHWA-----------YKEKGRDGKGAELSRKDAA---SFGWLRQ 388
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ E+Q + REF++T+ DL VFVFTP+G +K+LP+GAT VD+AY IH+EIG
Sbjct: 389 LVEFQRDLA---DPREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEIG 445
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIM 654
V AKVNG LV + L N + +EI+T NA SK WL KT A+ +I
Sbjct: 446 EHCVGAKVNGKLVPLRYTLKNGDTIEILTSPNAHPSKD-------WLTFVKTSRAQARIR 498
Query: 655 KFLREQAALSASEITAD 671
+F+R+ + EI D
Sbjct: 499 QFIRQAEHRRSVEIGRD 515
>gi|422339976|ref|ZP_16420932.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370415|gb|EHG17798.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 725
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20 DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM +IKSELE+++F Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDMAFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + D + +K E++ K YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 445 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 488
>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
Length = 734
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAATEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 320/545 (58%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+ DL + P +++ L+ +A +A +AH Q R+SGEP+I+HP+ VA IL +
Sbjct: 6 SPEELYRDLIERVQKYHPSDDITLIEKAYNIASKAHAKQLRKSGEPYIVHPLCVAIILAD 65
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L+LD ESI AGLLHD VEDT V+T E IE EFG V IV+G V+KL K+K N+
Sbjct: 66 LQLDKESIVAGLLHDVVEDT-VMTDEDIEREFGPDVALIVDG---VTKLEKIKYNNDKLE 121
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
Q A++LR+MF+AM +++RVI+VKLADRLHNMRTLSH P KQ IA ET+ ++APLA
Sbjct: 122 YQ---AENLRRMFIAMAKDIRVIMVKLADRLHNMRTLSHQPEAKQKEIAKETMDIYAPLA 178
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
+ LG+ ++K EL++LS Y E Y + ++A K + EA ++ I D+ +
Sbjct: 179 QRLGISKVKVELDDLSLKYLEPEVYRDLVDKIA-----VRKSVREA---FVQDIVDEVAE 230
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ +K +I K +SIY+ +L S++++ + +RII+
Sbjct: 231 AISAAGIKAQIDGRVKHFFSIYRKMLNQDKSLDQIYDLFAVRIIV------------DSI 278
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H I+ PIP KDYIA PKPN YQSLHTTL+ PF E+QI
Sbjct: 279 KDCYAALGIIHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLVGKTGTPF--------EIQI 330
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT +M AE GIAAH+ + + G + + A ++SWL I
Sbjct: 331 RTYDMHRTAEYGIAAHWKYK--------------EASNGNIIKESEAE---KMSWLQQIL 373
Query: 538 EWQEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+WQ++ N +EF+ ++ DL V+VFTP G++K LP G+T +D+AY +HT +G
Sbjct: 374 DWQKDMSDN---KEFLSSVKTDLDVYSDTVYVFTPTGDVKTLPAGSTPIDFAYSVHTAVG 430
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG +V ++L N + VE++T S+++ + WL K+ A++KI +
Sbjct: 431 NKMVGARVNGQMVKNDYILQNGDRVEVVT-----SQNSHGPSRDWLNIVKSSQAKNKIQQ 485
Query: 656 FLREQ 660
+ R +
Sbjct: 486 WFRSE 490
>gi|254303921|ref|ZP_04971279.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|22087659|gb|AAM90994.1|AF525504_1 ppGpp [Fusobacterium nucleatum]
gi|148324113|gb|EDK89363.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 725
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20 DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM +IKSELE+++F Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDIAFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + D + +K E++ K YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 445 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 488
>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
Length = 734
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK +A ++SW I E+Q E + + EF++++
Sbjct: 348 ----------------EGKAAS-ESATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|421527317|ref|ZP_15973920.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum ChDC F128]
gi|402256525|gb|EJU07004.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum ChDC F128]
Length = 725
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 318/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 20 DFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM +IKSELE+++F Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDMAFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + D + +K E++ K YSIY
Sbjct: 190 HHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSD------LGIKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I+ K CYHVLG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CYHVLGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 445 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 488
>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
Length = 736
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 314/539 (58%), Gaps = 60/539 (11%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
+R Y ++L+R+A +A EAH GQ R SGE +IIHPV VA+IL +L++D +I+
Sbjct: 15 IRQVQVYQPEMAVDLLRKAYAVACEAHKGQLRVSGEEYIIHPVGVAKILADLQIDATTIS 74
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
A +LHD VEDT +T E IE++FG V +V+G TK+S++ E S ++ + ++
Sbjct: 75 AAILHDVVEDT-FITLEDIEKKFGKEVAMLVDGVTKLSRI-------EYKSKEEQQLENY 126
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M LAM +++RV+++KLADRLHNMRTL MP KQ IA ETL+++APLA LGM IK
Sbjct: 127 RKMLLAMAKDLRVVLIKLADRLHNMRTLKFMPEVKQKRIARETLEIYAPLAHRLGMSNIK 186
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
E+E+LSF Y E Y ++ +V +E + ++EA +IL ++ D M +K EI
Sbjct: 187 WEMEDLSFRYLEPERYYELVEKVKQKRQERQDIIDEAIRILSDRLAD------MGIKAEI 240
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
+ K YSIYK + K INE+ ++ +R+ L + CY LG+VH
Sbjct: 241 QGRPKHFYSIYKKMQKDHKDINEIYDLSAVRV------------LVETVKDCYGALGIVH 288
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W PIP KDYIA PK N YQSLHTT+I + LE+QIRT EM +E GIAAH
Sbjct: 289 TLWKPIPLRFKDYIAMPKSNMYQSLHTTVIGTRGQP---LEIQIRTWEMHRTSEYGIAAH 345
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ + G GK + ++SWL + EWQ++ REFV
Sbjct: 346 WRYK------------EGTKNSGK-------DFDQKLSWLRQLLEWQQDL---RDPREFV 383
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+T+ D+ VFVFTP+G++ +LP G+ +D+AY IHT++G++ V A+VNG +V H
Sbjct: 384 ETVKLDVFSDEVFVFTPKGDVIDLPAGSVPLDFAYRIHTDVGHRCVGARVNGKIVPLEHK 443
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEI 668
LAN ++VEIIT +K++ + WL + R+KI ++ RE+ L EI
Sbjct: 444 LANGDIVEIIT-----AKNSNGPSRDWLNIVGSSETRNKIRQWFKKEKREENILKGWEI 497
>gi|326791627|ref|YP_004309448.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium lentocellum DSM 5427]
gi|326542391|gb|ADZ84250.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium lentocellum DSM 5427]
Length = 743
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 317/539 (58%), Gaps = 55/539 (10%)
Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
P+ ++E L I SY + LE+V RA LA AH+ Q R+SGEP+IIHP+EVA L +L
Sbjct: 2 PDEIYERLIKKIRSYHPSDNLEMVERAYQLAKSAHESQLRKSGEPYIIHPLEVACNLADL 61
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD ESI AGLLHD VEDT+ T E IE F V +V+G V+KLGK++ +N +
Sbjct: 62 ELDIESIVAGLLHDVVEDTDY-TLEDIERLFNKEVALLVDG---VTKLGKIQYSAQNKQL 117
Query: 246 Q--DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
Q +++A++ R+MFLAM +++RV+++KLADRLHNM+TL M P KQ IA ETL ++AP+
Sbjct: 118 QKEEIQAENYRKMFLAMAQDIRVVLIKLADRLHNMQTLKFMTPAKQKEIAEETLNIYAPI 177
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ +IK++LE+LS Y E Y ++ +++ E + +E + + +K+
Sbjct: 178 AHRLGICKIKADLEDLSLRYMEPEVYYELAHQISSKRMERIQYIEHIVQQIKEKV----- 232
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
++ I K +SIYK ++ +++++ + +R I+K +
Sbjct: 233 -SAAGIEAVIEGRPKHFFSIYKKIVNKNKTLDQIYDLFAVRAIVK------------SVK 279
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY VLG++H ++TPIP KDYIA PKPN Y+SLHTTL+ E E+QIRTEEM
Sbjct: 280 DCYGVLGIIHEMYTPIPGRFKDYIAMPKPNMYRSLHTTLMG---EEGTPFEMQIRTEEMH 336
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + GKT +++WL I EWQ +
Sbjct: 337 RTAEYGIAAHW-----------------KYKEGKTDQGTQDKSEEKLTWLREILEWQRDM 379
Query: 544 VGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
N +EF+ + DL G +V+VFTP GE+ LPKG+T +D+AY IH+ +GNKM+ A
Sbjct: 380 SDN---QEFMSALKGDLDVYGDQVYVFTPSGELLTLPKGSTPIDFAYHIHSGVGNKMIGA 436
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
KVNG +V+ +VL N + VEI+T + S + WL K+ AR KI ++ R+Q
Sbjct: 437 KVNGKIVTIDYVLKNGDRVEILTASNAKGPS-----RDWLNIVKSTQARTKINQWFRKQ 490
>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. K]
gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
Length = 746
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 315/557 (56%), Gaps = 56/557 (10%)
Query: 119 SDAFKEDSPERLWE--DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHP 175
SDA + P L D+ +S P+ +L+L+++A + + + H GQ R+SGEP+++HP
Sbjct: 11 SDATRYAGPSTLLRLNDILDRVSGYHPDPDLDLIKKAYVYSAKVHQGQIRKSGEPYLVHP 70
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
+EVA IL EL+LD S+ GLLHDT+EDT + T + I E FG + +V+G TK+S+
Sbjct: 71 LEVAGILAELKLDESSVVTGLLHDTIEDT-LATKKEISELFGPEIADLVDGVTKLSQFTA 129
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
+ E +A++ R+M +AM +++RV++VKLADR HNMRTL M P Q IA E
Sbjct: 130 ANTQEEK------QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDAMKPESQERIARE 183
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
TL ++APLA LG+ IK+ELE LSF Y DY+++ +V+ +E E+ + E +I+
Sbjct: 184 TLDIYAPLANRLGIQWIKTELEELSFKYLRPGDYSELNEKVSVRAREKERFVAEVVEIIR 243
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + ++ ++ K YSIY+ + + ++ + R+I+
Sbjct: 244 RRLAE------AGMQADVSGRVKHVYSIYRKMRQLDVDFEQIQDVVGFRVIVDTVAE--- 294
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
CY LG VH +W P+P KDYIA PKPN YQSLHTT++ E R+EV
Sbjct: 295 ---------CYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGE---RIEV 342
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT EM IAE G+AAH++ + GR +G + +A WL
Sbjct: 343 QIRTREMHRIAEEGVAAHWA-----------YKEKGRDGKGAELSRKDAA---SFGWLRQ 388
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ E+Q + REF++T+ DL VFVFTP+G +K+LP+GAT VD+AY IH+EIG
Sbjct: 389 LVEFQRDLA---DPREFLETVKVDLFSDEVFVFTPKGAVKSLPRGATPVDFAYTIHSEIG 445
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIM 654
V AKVNG LV + L N + +EI+T NA SK WL KT A+ +I
Sbjct: 446 EHTVGAKVNGKLVPLRYTLKNGDTIEILTSPNAHPSKD-------WLTFVKTSRAQARIR 498
Query: 655 KFLREQAALSASEITAD 671
+F+R+ + EI D
Sbjct: 499 QFIRQAEHRRSVEIGRD 515
>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 734
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
1313]
gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
Length = 724
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/529 (40%), Positives = 316/529 (59%), Gaps = 69/529 (13%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I +PN + L+ +A L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD +I AG+
Sbjct: 12 IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T E+I E FG V +V+G V+KLGK+ + ++++A++LR+M
Sbjct: 72 LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +MPP KQ A ETL+++APLA LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y + + Y + ++A +E E + E K + +K + + + I
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ +++ +I ++ + +R+I+ + + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
P+P KDYIA PKPN YQSLHTTLI PF EVQIRT EM +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + GK+ + +++WL + EWQ+E + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM AKVN +V
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VL N ++VEI+T + + S + WL+ K+ A++KI ++ +++
Sbjct: 434 YVLQNGDIVEILTSSNVQGPS-----RDWLKIVKSSQAKNKINQWFKKE 477
>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
Length = 727
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 313/521 (60%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ ELV++A A AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG LHD
Sbjct: 32 YLNDEHAELVKKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHD 91
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + + E IEE F + V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 92 VVEDTEI-SLENIEESFNSEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFVA 143
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 144 MAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISKIKWELEDT 203
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y ++ + E E+ L++ ++ ++ + +++K+EI K
Sbjct: 204 ALRYLNPQQYYRIVNLMKKKRAEREEYLDDVINVMRGRLSE------VSIKSEISGRPKH 257
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 258 IYSIYRKMALQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTCWKPM 305
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRT +M IAE GIAAH++ +
Sbjct: 306 PGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTMDMHRIAEFGIAAHWAYK-- 360
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK V ++ +++W I E+Q++ + EF++++ D
Sbjct: 361 ---------------EGKRVN-EGSSFEEKLTWFREILEFQDDAA---NAEEFMESLKID 401
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L ++
Sbjct: 402 LFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGDI 461
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T SK ++ K WL+ A+T A+++I F ++Q
Sbjct: 462 IEILT-----SKHSYGPSKDWLKLAQTSQAKNRIRTFFKKQ 497
>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 734
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
Length = 734
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|374297070|ref|YP_005047261.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium clariflavum DSM
19732]
gi|359826564|gb|AEV69337.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium clariflavum DSM
19732]
Length = 725
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 318/526 (60%), Gaps = 68/526 (12%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y S + EL+ +A ++ EAH+GQ+R SGEPFI+HP+EVA IL ELELD +I AG+LHD
Sbjct: 15 YNSNCDFELLEKAYQVSKEAHNGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILHD 74
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
T+EDT T+E+++E+FG V +V+G V+KLGK+ + ++ +A++LR+MFLA
Sbjct: 75 TIEDTTY-TYEQLKEKFGEEVALLVDG---VTKLGKIPYTTK----EEQQAENLRKMFLA 126
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI++KLADRLHNMRTL +M P KQ A ETL+++AP+A LG+ +IK ELE+L
Sbjct: 127 MSKDIRVILIKLADRLHNMRTLKYMSPEKQIEKAKETLEIYAPIAHRLGISKIKWELEDL 186
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y + + Y + ++A+ +E E +E+ L +KI + + ++ + K
Sbjct: 187 SLRYLDPKGYYDLVDKIANKRREREAYIEKILATLKEKISE------LGIQVRLDGRPKH 240
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++++ + R+I+ + CY VLGLVH I+ P+
Sbjct: 241 FYSIYRKMQQQNKTLDQIYDLFAFRVIV------------DTVKDCYAVLGLVHEIFKPM 288
Query: 440 PRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
P KDYIA PKPN YQSLHTT+I PF E+QIRT EM +AE GIAAH+
Sbjct: 289 PGRFKDYIAMPKPNMYQSLHTTVIGPDGVPF--------EIQIRTWEMHRVAEVGIAAHW 340
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
+ G G N +++WL + +WQ + EF++
Sbjct: 341 K---YKEGKSGGGYEN------------------KLAWLRQLLDWQTD---TRDPNEFME 376
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
T+ DL VFVFTP+G++ +L G+T +D+AY+IH+ IGNKMV AKVNG +V + L
Sbjct: 377 TLKIDLFTDEVFVFTPKGDVVSLAAGSTPIDFAYLIHSAIGNKMVGAKVNGKIVPIEYEL 436
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
N ++VEI+T + + S + WL+ KT AR+KI ++ +++
Sbjct: 437 KNGDIVEILTSSNVHGPS-----RDWLKIVKTSQARNKINQWFKKE 477
>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
27405]
gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
27405]
Length = 724
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 212/529 (40%), Positives = 316/529 (59%), Gaps = 69/529 (13%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I +PN + L+ +A L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD +I AG+
Sbjct: 12 IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T E+I E FG V +V+G V+KLGK+ + ++++A++LR+M
Sbjct: 72 LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +MPP KQ A ETL+++APLA LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y + + Y + ++A +E E + E K + +K + + + I
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ +++ +I ++ + +R+I+ + + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
P+P KDYIA PKPN YQSLHTTLI PF EVQIRT EM +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + GK+ + +++WL + EWQ+E + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM AKVN +V
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VL N ++VEI+T + + S + WL+ K+ A++KI ++ +++
Sbjct: 434 YVLQNGDIVEILTSSNVQGPS-----RDWLKIVKSSQAKNKINQWFKKE 477
>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 734
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEGAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E +EE + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|27262490|gb|AAN87526.1| GTP pyrophosphokinase [Heliobacillus mobilis]
Length = 734
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/517 (40%), Positives = 304/517 (58%), Gaps = 57/517 (11%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
++LE VRR A AH GQ R+SGEP+I HP+ VA IL +LELD +IAAGLLHD VED
Sbjct: 20 SDLEFVRRDFQYADVAHTGQLRKSGEPYIYHPLAVAFILADLELDMATIAAGLLHDVVED 79
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T + T E +E+EFG V +V+G TK+S+L E S Q+ + + LR+MFLAM ++
Sbjct: 80 TPI-TLEELEKEFGPEVALLVDGVTKLSRL-------EVRSKQEQQVESLRKMFLAMAKD 131
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RVI++KLADRLHNMRTL H P KQ IA ET+++FAPLA LG+ +IK ELE+LS Y
Sbjct: 132 IRVILIKLADRLHNMRTLRHQKPEKQREIAEETIELFAPLANRLGISRIKWELEDLSLRY 191
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
E Y + +R+A E E+ + + + L +K+E + VK +I K YSI
Sbjct: 192 LEPETYYDLVQRIATKRAEREERINDIIRELSEKLE------AVGVKADISGRPKHFYSI 245
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
Y+ + + ++E+ + +R+ L + CY LG++H IW PIP
Sbjct: 246 YRKMTNQKKDLSEIYDLIAVRV------------LVDSVKDCYGALGIIHTIWKPIPMRF 293
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KDYIATPK N YQSLHTTL+ + E EVQIRT EM AE GIAAH+
Sbjct: 294 KDYIATPKTNMYQSLHTTLVGPMGEP---FEVQIRTFEMHRTAEYGIAAHWK-------- 342
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+ G+S +++WL ++EWQ E ++ F++++ +
Sbjct: 343 ---YKEGGKS--------QGTGFEEKLAWLRQLQEWQSE---QKDTQTFMESLKIEFFSD 388
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VF+FTP+G++ LP G+T +D+AY IH+ +G++ + AKVNG +V + L+N E++EI+
Sbjct: 389 AVFIFTPKGDVIELPAGSTPIDFAYRIHSNVGHRCMGAKVNGRIVPIDYKLSNGEIIEIL 448
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
T KS + WL KT +AR++I ++ +++
Sbjct: 449 T------KSTPGPSRDWLNVVKTSNARNRIRQWFKKE 479
>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 727
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 312/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
LEL+ +A A AH+GQ R SGEP+I+HP+EVA IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T++++ E FG + +V+G V+KLGK++ K S + +A+++R+M +AM +++R
Sbjct: 79 V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 312/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
LEL+ +A A AH+GQ R SGEP+I+HP+EVA IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T++++ E FG + +V+G V+KLGK++ K++ +A+++R+M +AM +++R
Sbjct: 79 V-TYDQLMENFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
Length = 727
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---TSNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
Length = 732
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 320/521 (61%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ +++A ++A AH+GQ R SGEP+I HP++VA IL EL++D E++AAG LHD
Sbjct: 19 YMNEEHVDFIKKAFVVAKAAHEGQFRSSGEPYINHPIQVAGILAELQMDPETVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V + E I EFG V +V+G V+KL KLK K S ++ +A++ R+MF+A
Sbjct: 79 VVEDTEV-SREDIIREFGDEVAMLVDG---VTKLDKLKFK----SNEEKQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ ++ ETL++F+PLA LG+ IK ELE++
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHVPAAKQRRVSEETLEIFSPLAHRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y+N + Y R+ +L K+ E E+ + +M+++ + LD M + +E+ K
Sbjct: 191 ALRYSNPQQYY----RIVNLMKQKRVEREKYLQDVMEQMRVE--LDNMGIASEMHGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ + NE+ + +RI++K + CY LG++H +W P+
Sbjct: 245 LYSIYQKMVIQKKEFNEIYDLLAVRIVVKSI------------KDCYAALGIIHTLWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LEVQIRTEEM I+E G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKQNLYQSLHTTVVGPAGDP---LEVQIRTEEMHRISEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK+V ++ +I +++W I E Q E + ++EF++++ D
Sbjct: 348 ---------------EGKSVAKSSNDIDSKLTWFREILEIQNE---SSNAQEFMESLKFD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP G++ LP+G+ +D+AY +H+E+GN+ AKVNG +V L ++
Sbjct: 390 LFSDMVYVFTPNGDVVELPQGSVPIDFAYRVHSEVGNRTTGAKVNGKIVPLDSSLETGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK +F + WL+ A T A++KI ++ ++Q
Sbjct: 450 VEILT-----SKQSFGPSRDWLKIAHTSQAKNKIRQYFKKQ 485
>gi|229062102|ref|ZP_04199427.1| GTP pyrophosphokinase [Bacillus cereus AH603]
gi|228717254|gb|EEL68929.1| GTP pyrophosphokinase [Bacillus cereus AH603]
Length = 727
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
Length = 727
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
Length = 734
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 306/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL+ ++L +RRA A EAH Q R+SGEP+IIHP++VA IL LE+D E+IA G LH
Sbjct: 18 TYLNEDDLAFIRRAYQFAEEAHSDQFRKSGEPYIIHPIQVAGILVNLEMDPETIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V + E IE+ F V +V+G V+KLGK+K K S + +A++ R+MF+
Sbjct: 78 DVVEDTEV-SIEEIEKAFNTEVSMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E +EE + +++D + + ++ K
Sbjct: 190 TALRYLNPQQYYRIVHLMKQKRNEREHYIEEVIDEIRSQLKD------VNIDADLNGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI + + + CY VLG++H W P
Sbjct: 244 HLYSIYRKMVLQNKQFNEIYDLLAVRITV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT +M IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A GR + + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGRQSTAE------QSFEEKLTWFREILEWQSE---THDAEEFMESLKV 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D+AY IHTE+GN+ + AKVNG + +VL +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFAYRIHTEVGNQTIGAKVNGKMEPLDYVLNTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ K W++ A+T A++KI +F ++Q
Sbjct: 448 ILEIMT-----SKHSYGPSKDWIKLAQTSQAKNKIKQFFKKQ 484
>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
Length = 734
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYL+ + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLTDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E+ +EE + ++E+ + + + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAEREQYVEEVVDEVKNRVEE------VNISADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI+ VG + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH+
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ A ++SW I E+Q E + + EF++++
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|407706935|ref|YP_006830520.1| hypothetical protein MC28_3699 [Bacillus thuringiensis MC28]
gi|423615251|ref|ZP_17591085.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|401260930|gb|EJR67097.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|407384620|gb|AFU15121.1| GTP pyrophosphokinase [Bacillus thuringiensis MC28]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|229032057|ref|ZP_04188039.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
gi|228729249|gb|EEL80244.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423483983|ref|ZP_17460673.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
gi|401141534|gb|EJQ49089.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ +++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLAVDDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|229025869|ref|ZP_04182265.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|423389281|ref|ZP_17366507.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
gi|423417674|ref|ZP_17394763.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|228735421|gb|EEL86020.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|401106845|gb|EJQ14802.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|401641372|gb|EJS59089.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423512518|ref|ZP_17489049.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
gi|402449489|gb|EJV81326.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423558014|ref|ZP_17534316.1| GTP pyrophosphokinase [Bacillus cereus MC67]
gi|401191282|gb|EJQ98304.1| GTP pyrophosphokinase [Bacillus cereus MC67]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423478548|ref|ZP_17455263.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
gi|402427544|gb|EJV59650.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
Length = 726
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423400750|ref|ZP_17377923.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
gi|401653740|gb|EJS71283.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|423521737|ref|ZP_17498210.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
gi|401176399|gb|EJQ83594.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|229076038|ref|ZP_04209009.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|229098881|ref|ZP_04229817.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|229105045|ref|ZP_04235697.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|229117906|ref|ZP_04247268.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|423377736|ref|ZP_17355020.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|423440844|ref|ZP_17417750.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|423448988|ref|ZP_17425867.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|423463908|ref|ZP_17440676.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|423533272|ref|ZP_17509690.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
gi|423541473|ref|ZP_17517864.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|423547709|ref|ZP_17524067.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|423622506|ref|ZP_17598284.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|228665563|gb|EEL21043.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|228678355|gb|EEL32580.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|228684554|gb|EEL38496.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|228707072|gb|EEL59274.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|401129582|gb|EJQ37265.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|401172661|gb|EJQ79882.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|401179430|gb|EJQ86603.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|401260626|gb|EJR66794.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|401636002|gb|EJS53756.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|402417505|gb|EJV49805.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|402420175|gb|EJV52446.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|402463491|gb|EJV95191.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
Length = 727
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLAVEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|403070228|ref|ZP_10911560.1| GTP pyrophosphokinase [Oceanobacillus sp. Ndiop]
Length = 733
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 311/523 (59%), Gaps = 58/523 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS +++EL++ A A EAH Q R+SGEP+IIHPV+VA IL LE+D E+IA G LHD
Sbjct: 19 YLSNDDVELIQHAYDFASEAHHDQFRKSGEPYIIHPVQVAGILANLEMDAETIAGGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E++E+EF + +V+G V+KLGK++ + + +A++ R+MF+A
Sbjct: 79 VVEDTDV-TLEKMEQEFNHEIAMLVDG---VTKLGKIRYETKEAQ----QAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+ KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 131 MAKDIRVILIKLADRLHNMRTLKHLSSEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL--MTVKTEIRSVC 377
+ Y N + Y R+ L K+ +E E +K++ D+ +DL + ++ E+
Sbjct: 191 ALRYLNPQQYY----RIVQLMKQKREERES----YIKEVIDELSVDLHEVNIEAEMSGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ ++ NE+ + +RII+ + CY VLG++H W
Sbjct: 243 KHLYSIYQKMVLQNKQFNEIYDLLAVRIIV------------DSIKDCYAVLGIIHTNWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 291 PMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEYGIAAHWAYK 347
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GK V + +++W I +WQ + + EF++++
Sbjct: 348 -----------------EGKQVKPGKKSFEEKLTWFREILDWQND---THDAEEFIESLK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL V+VFTP+GE+ LP G+ +D+AY IHTEIGNK + AK+NG + + L N
Sbjct: 388 IDLFFDMVYVFTPKGEVIELPSGSIPLDFAYKIHTEIGNKTIGAKINGKMEPLDYKLQNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VE++T SK ++ + WL+ +T A+ KI +F ++Q
Sbjct: 448 DIVEVMT-----SKHSYGPSQDWLKMTQTSQAKSKIKQFFKKQ 485
>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 719
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 312/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
LEL+ +A A AH+GQ R SGEP+I+HP+EVA IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T++++ E FG + +V+G V+KLGK++ K++ +A+++R+M +AM +++R
Sbjct: 79 V-TYDQLMENFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
Length = 716
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 312/532 (58%), Gaps = 58/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L ++Y +L+L+R+A + + H GQ R SGEP+++HP+EVA +L +L+LD
Sbjct: 3 RLNDILDKVVTYNPVADLDLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADLKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDT+EDT + T E +E FGA V +V+G V+K+GK+ K + S
Sbjct: 63 VPTVVTGLLHDTIEDT-LTTREELEGMFGAEVANLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ SI+ ETL ++APLA LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSISRETLDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IKSELE+LSF Y + Y + +VA KE E +EE +I++ K+ +
Sbjct: 175 ISWIKSELEDLSFRYLEPQIYYDLASKVAKKKKERESYVEEVRQIIVSKLAEHDL----- 229
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
K ++ K YSI++ + I+++ + +R+++ + + CY V
Sbjct: 230 -KGDVFGRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMV------------NDIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT +M +AE
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGE---RMEVQIRTSDMHRVAEA 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +WL + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---QD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
S EF++T+ +L V+VFTPRG++K+ PKG+T +D AY IHT+IG++ V AKVNG LV
Sbjct: 371 SHEFMNTVKVELFPEEVYVFTPRGDVKSFPKGSTPIDLAYTIHTDIGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VE+IT + K WL+ K+ AR+KI +++ +
Sbjct: 431 PLKYELKNGDIVEVITSPHHTPS------KDWLKIVKSSRARNKIRAWIKTE 476
>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
Length = 716
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 311/537 (57%), Gaps = 58/537 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L+L+R+A + + H GQ R SGEP++IHP+EVA IL +L+LD
Sbjct: 3 RLNDILEKVSSYNPGADLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDTVEDT + T E +E FGA V R+V+G V+K+GK+ K + S
Sbjct: 63 LPAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ +IA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +K ELE+LSF Y + Y + +VA +E E + +I+ K++E+
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLASKVAKKKQERESYVSTVKEIIKKQLEEH------G 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K ++ K YSIY+ + I+E+ + +R+ + + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSV------------DDIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT EM +AE
Sbjct: 277 LGVIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +W+ + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------RRFTWIRQLLEWQQEL---DD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
S+EF+DT+ +L VF+FTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
+ L ++VE+IT + K WL+ K+ AR+KI +++ + L +
Sbjct: 431 PLKYELKTGDIVEVITSPHHTPS------KDWLKIVKSSRARNKIRAWVKTEERLRS 481
>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 727
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
Length = 727
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
Length = 721
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 213/527 (40%), Positives = 310/527 (58%), Gaps = 59/527 (11%)
Query: 135 RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAA 194
+ +SY +L+L+R+A M A EAH GQ R SGE FI HP+ VA IL +LELD +IAA
Sbjct: 8 KQILSYSPSADLDLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAA 67
Query: 195 GLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLR 254
GLLHD VEDT+ T E IE+ FG+ + +V+G V+KLGKL+ K + ++ +A++LR
Sbjct: 68 GLLHDVVEDTDY-TIEDIEKIFGSEIAILVDG---VTKLGKLEFKTK----EEQQAENLR 119
Query: 255 QMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKS 314
+MF AM +++R+I++KLADRLHNMRTL MP KQ A ET+ +FAPLA LG+ +IK
Sbjct: 120 KMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKW 179
Query: 315 ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT-VKTEI 373
ELE+L+F Y E Y + +VA +E E + + IL +++ L T + EI
Sbjct: 180 ELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNERL-------LATGINAEI 232
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
+ K YSIYK + + ++ + +R+I+ + + CY LG+VH
Sbjct: 233 QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIV------------NTVKDCYGALGVVH 280
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W PIP KDYIA PKPN YQSLHTT+I S LE+QIRT EM AE GIAAH
Sbjct: 281 TLWKPIPGRFKDYIAMPKPNMYQSLHTTVID---SSGDPLEIQIRTYEMHKTAEYGIAAH 337
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ R K N+ ++SWL I +WQ E +++F+
Sbjct: 338 W--------------------RYKEGDKNSNEFEQKLSWLREILDWQREL---RDAKDFM 374
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+ + DL V+VFTP+G++ +LP G+ VD+AY IHT++GN+ + AKVNG +V +
Sbjct: 375 ENLKIDLFTDEVYVFTPKGDVIDLPMGSCPVDFAYRIHTDVGNRCIGAKVNGKMVPLDYK 434
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
LAN ++VEI+T + S + WL K+ A++KI ++ +++
Sbjct: 435 LANGDIVEIVTSGHSNGPS-----RDWLNIVKSPQAKNKIRQWFKKE 476
>gi|366164520|ref|ZP_09464275.1| (p)ppGpp synthetase I SpoT/RelA [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/529 (39%), Positives = 320/529 (60%), Gaps = 69/529 (13%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
IS +PN + L+ +A +++ EAHDGQ+R SGEPFI+HP+EVA IL ELELD +I AG+
Sbjct: 12 ISKYNPNCDFTLLEKAYLISREAHDGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGI 71
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHDT+EDT T+E+++++FG V +V+G V+KLGK+ + ++ +A++LR+M
Sbjct: 72 LHDTIEDT-TYTYEQLKDKFGEEVALLVDG---VTKLGKIPYTTK----EEQQAENLRKM 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM++++RVI++KLADRLHNMRTL +M P KQ A ETL+++APLA LG+ +IK EL
Sbjct: 124 FLAMSKDIRVILIKLADRLHNMRTLKYMAPEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y + + Y + ++A +E E +E+ L ++I + + ++ +
Sbjct: 184 EDLCLRYLDPKGYYDLVDKIAKKRREREAYIEQIVLTLKERIAE------LGIEVRLDGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++++ + RII+ S + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMEQQTKTLDQIYDLFAFRIIV------------SSVKDCYAVLGLVHEIY 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
P+P KDYIA PKPN YQSLHTT+I PF E+QIRT +M +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGVPF--------EIQIRTWDMHRVAEVGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + G G + N +++WL + +WQ+E E
Sbjct: 338 AHWK---YKEGSKGDSDDN------------------KLAWLRQLLDWQKEM---RDPNE 373
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL VFVFTP+G++ +L +T +D+AY IH+ IGNKMV AKVNG +V
Sbjct: 374 FMETLKVDLFTDEVFVFTPKGDVFSLAASSTPIDFAYSIHSAIGNKMVGAKVNGKIVPIE 433
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VEI+T + + S + WL+ KT AR+KI ++ +++
Sbjct: 434 YELKNGDIVEILTSSNVHGPS-----RDWLKIVKTSQARNKINQWFKKE 477
>gi|30264477|ref|NP_846854.1| GTP pyrophosphokinase [Bacillus anthracis str. Ames]
gi|30259135|gb|AAP28340.1| GTP diphosphokinase [Bacillus anthracis str. Ames]
Length = 727
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA +L +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +++EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVYSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|410456899|ref|ZP_11310748.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
gi|409927039|gb|EKN64186.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
Length = 731
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 316/524 (60%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ +ELV +A A AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 16 TRKYLNEEHVELVSKAYEYAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPATVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN+ + + IEE F V +V+G V+KLGK K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTNI-SLKDIEEAFNDEVAMLVDG---VTKLGKFKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y R+ +L K+ E E+ + ++ +E + +++K E+
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLEDVI--VEVKARMGEVSIKAELSGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ ++ +E+ + +RI++ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMVLQNKQFSEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++
Sbjct: 290 KPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTYEMHRIAEFGVAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKT+ +++ +++W I E+Q + + EF++++
Sbjct: 347 K-----------------EGKTIS-DSSTFEQKLTWFREILEFQND---TANAEEFMESL 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VF+FTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 386 KIDLFSDMVFIFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ + WL+ A+T A++KI F ++Q
Sbjct: 446 GDIIEILT-----SKHSYGPSQDWLKLAQTSQAKNKIRAFFKKQ 484
>gi|225874445|ref|YP_002755904.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792335|gb|ACO32425.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
Length = 747
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 309/525 (58%), Gaps = 57/525 (10%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
++L+++RRA E H GQ R SGEPF++HP+EVA +L E++LD +IAAGLLHD VED
Sbjct: 37 DDLDIIRRAWDFCLEHHQGQFRASGEPFVLHPLEVALVLAEMKLDSTAIAAGLLHDAVED 96
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T V T I +FG V IVEG V+K+ K++ N +D +A+++R+M LAM +
Sbjct: 97 TPV-TAADIANQFGEQVAHIVEG---VTKIDKIQFANR----EDRQAENVRKMLLAMVTD 148
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
VRV+++KLADRLHNMRTL H+ +Q +IA ETL ++APLA LGM +++ ELE+LSF Y
Sbjct: 149 VRVVLIKLADRLHNMRTLEHLSAERQQAIARETLDIYAPLAHRLGMGKLRGELEDLSFRY 208
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
+ Y +++ V + E E+ L +L++K+++++ +T + + R K +SI
Sbjct: 209 VDPYSYDQLQLAVEERRSEGEQFLAGVEALLLEKLKENK----ITARVQWR--IKRLFSI 262
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
+ + KSR S++++ + LR+I P CY VLGL+H IW P+P +
Sbjct: 263 HSKLQKSRSSVDQLYDLLALRVITNSVPD------------CYAVLGLIHSIWRPVPGRI 310
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KD+IA P+PN YQSLHTT+ + E + EVQIRTEEM +AE GIAAH+ +
Sbjct: 311 KDFIAMPRPNMYQSLHTTV---MGEGGHQFEVQIRTEEMHRVAEEGIAAHWKYKA----- 362
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
G SP +A R++W+ + EWQ E EF+ T+ DL
Sbjct: 363 -------GNSP-------ISARDEQRLAWVRQLVEWQREMT---DPNEFLSTLKIDLYPE 405
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
V+ FTP+G++ LPK A+ +D+AY IHTE+G+ AKVNG +V L N +VVE+I
Sbjct: 406 EVYTFTPKGKVVVLPKDASPLDFAYSIHTEVGHSCTGAKVNGRMVPLRSKLRNGDVVEVI 465
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
T N + + WL K+ AR+KI +L E A +I
Sbjct: 466 TQNGHTPS------RDWLSIVKSSRARNKIKHWLNEHQRERAIDI 504
>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
Length = 716
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 217/537 (40%), Positives = 313/537 (58%), Gaps = 58/537 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +LELVR+A + + H GQ R SGEP+++HP+EVA +L EL+LD
Sbjct: 3 RLNDILEKVSSYNPSCDLELVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGVLAELKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDTVEDT E +EE FG V R+V+G V+K+GK+ K + S
Sbjct: 63 VPTVVTGLLHDTVEDTLTTL-EELEEMFGPEVARLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ SIA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +KSELE+LSF Y + + Y + +V KE E ++E +I+ K+ D
Sbjct: 175 ISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERETYVDEVMQIIKAKLVDH------G 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K E+ K YSIY+ + I+E+ + +R++++ + CY V
Sbjct: 229 IKGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLIAIRVMVE------------DIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT EM +AE
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTSEMHRVAEA 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +WL + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEV--------KRFTWLRQLLEWQQEL---DD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREF+DT+ +L V+VFTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDTVKVELFPEEVYVFTPKGDVKGYPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
+ L N ++VE+IT + K WL+ ++ AR+KI +++ + L +
Sbjct: 431 PLKYELKNGDIVEVITSPHHTPS------KDWLKIVRSSRARNKIRAWIKTEERLRS 481
>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
Length = 727
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 716
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 213/527 (40%), Positives = 310/527 (58%), Gaps = 59/527 (11%)
Query: 135 RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAA 194
+ +SY +L+L+R+A M A EAH GQ R SGE FI HP+ VA IL +LELD +IAA
Sbjct: 3 KQILSYSPSADLDLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAA 62
Query: 195 GLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLR 254
GLLHD VEDT+ T E IE+ FG+ + +V+G V+KLGKL+ K + ++ +A++LR
Sbjct: 63 GLLHDVVEDTDY-TIEDIEKIFGSEIAILVDG---VTKLGKLEFKTK----EEQQAENLR 114
Query: 255 QMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKS 314
+MF AM +++R+I++KLADRLHNMRTL MP KQ A ET+ +FAPLA LG+ +IK
Sbjct: 115 KMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKW 174
Query: 315 ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT-VKTEI 373
ELE+L+F Y E Y + +VA +E E + + IL +++ L T + EI
Sbjct: 175 ELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNERL-------LATGINAEI 227
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
+ K YSIYK + + ++ + +R+I+ + + CY LG+VH
Sbjct: 228 QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIV------------NTVKDCYGALGVVH 275
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W PIP KDYIA PKPN YQSLHTT+I S LE+QIRT EM AE GIAAH
Sbjct: 276 TLWKPIPGRFKDYIAMPKPNMYQSLHTTVID---SSGDPLEIQIRTYEMHKTAEYGIAAH 332
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ R K N+ ++SWL I +WQ E +++F+
Sbjct: 333 W--------------------RYKEGDKNSNEFEQKLSWLREILDWQREL---RDAKDFM 369
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+ + DL V+VFTP+G++ +LP G+ VD+AY IHT++GN+ + AKVNG +V +
Sbjct: 370 ENLKIDLFTDEVYVFTPKGDVIDLPMGSCPVDFAYRIHTDVGNRCIGAKVNGKMVPLDYK 429
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
LAN ++VEI+T + S + WL K+ A++KI ++ +++
Sbjct: 430 LANGDIVEIVTSGHSNGPS-----RDWLNIVKSPQAKNKIRQWFKKE 471
>gi|452975303|gb|EME75122.1| GTP pyrophosphokinase RelA [Bacillus sonorensis L12]
Length = 733
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YLS + +++A A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 AYLSDEHVAFIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T E ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTSV-TLEDLKEAFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + ++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVQEVVNEVKNRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMAMQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK+V +A+ ++SW I E+Q E + + EF++++
Sbjct: 348 ----------------EGKSVN-EDASFEKKLSWFREILEFQNE---SSDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W+ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWINLAQTSQAKHKIRQFFKKQ 484
>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
Length = 740
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 211/542 (38%), Positives = 315/542 (58%), Gaps = 55/542 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L +V +A A +AH Q R+SGEP+IIHP++VA IL EL +D ++A+G LHD
Sbjct: 21 YMNKEHLAIVEKAYTFARDAHKEQFRKSGEPYIIHPIQVAGILAELRMDPSTVASGFLHD 80
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T + ++ EFG V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 81 VVEDTPV-TLDDLKAEFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 133 MAQDIRVILIKLADRLHNMRTLKHLPTQKQRRIANETLEIFAPLAHRLGISRVKWELEDT 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L ++ E E + ++ + D+ L+ + ++ +I K
Sbjct: 193 ALRYLNPQQYY----RIVHLMRQKRDERERYLQDVIDGVNDN--LEELNIQADITGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RII+ S + CY VLG++H W P+
Sbjct: 247 IYSIYRKMSIQQKQFNEIYDLLAVRIIV------------SSIKDCYAVLGIIHTRWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 295 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTTEMHQIAEYGVAAHW----- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + +F++++ D
Sbjct: 347 -------AYKEGKVVNAKTSFDN------KMTWFREILEYQNE---ADNAEDFMESLKLD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY IHTEIGNK + AKVNG +V+ + L ++
Sbjct: 391 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRIHTEIGNKTIGAKVNGKIVTLDYQLKTGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ KT AR+KI +F + Q E D V +
Sbjct: 451 IDILT-----SKHSYGPSRDWLKLVKTSQARNKIKQFFKRQTKEENVEKGRDAVEKELRQ 505
Query: 680 SG 681
SG
Sbjct: 506 SG 507
>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 312/520 (60%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
LEL+ +A A AH+GQ R SGEP+I+HP+EVA IL +LELD +IAAGLLHD +EDT+
Sbjct: 19 LELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T++++ E FG + +V+G V+KLGK++ K S + +A+++R+M +AM +++R
Sbjct: 79 V-TYDQLMENFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ ++ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVRSSQARNKIRQWFKKE 477
>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 754
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 306/521 (58%), Gaps = 51/521 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+P ++ VR+A LA +AH Q R+SGEP+IIHP+ V IL L++D +++AA LHD
Sbjct: 28 YLAPEQVAFVRKAYELAAKAHAAQTRKSGEPYIIHPIGVVSILVGLQMDDKTLAAAFLHD 87
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+ + I+E+FG V +V+G V+KLGK+ E S +D + ++ R+MFLA
Sbjct: 88 VVEDTDY-KLDYIKEQFGTVVANLVDG---VTKLGKI----EYISKEDRQIENYRKMFLA 139
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M ++RV+++KLADRLHNMRT+ +MP HKQ SI+ ETL+++APLA LG+Y IK ELE+L
Sbjct: 140 MARDIRVVLIKLADRLHNMRTMKYMPVHKQQSISRETLEIYAPLAHRLGIYTIKWELEDL 199
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y + Y + +V +E E + EA L +E ++ EI+ K
Sbjct: 200 AFRYMEPDIYYDLVEQVKIKRREREDMINEAMTTLKDAVEK------AGIRCEIQGRPKN 253
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI+K +L+ ++E+ + +R+ L + CY LG+VH +W PI
Sbjct: 254 FYSIHKKMLRDHKQLSEIYDLLAIRV------------LVDTVKDCYGTLGIVHSMWRPI 301
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDY+A PK N YQSLHTT+ L LE+QIRT EM I+E GIAAH+ +
Sbjct: 302 PGRFKDYVAVPKSNMYQSLHTTV---LSNGGQPLEIQIRTFEMHRISEYGIAAHWRYKE- 357
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G ++P +G ++SWL + EW ++ SR+FV+T+ D
Sbjct: 358 ----SGGSKPAAGGDKG---------FDAKLSWLRQLLEWHKDM---NDSRDFVNTVKMD 401
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ VFVFTPRG++ +LP G+ +D+AY IHT++GN+ V AKVNG +V + L N ++
Sbjct: 402 IFADEVFVFTPRGDVIDLPVGSVPIDFAYRIHTDVGNRCVGAKVNGRIVPLDYQLKNGDI 461
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE+IT SK + + W+ + R+KI + +++
Sbjct: 462 VEVIT-----SKQSNGPSRDWINVVGSSDTRNKIKSWFKKE 497
>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
Length = 727
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + LD + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LDEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVN +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNEKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
Length = 727
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLANEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEV-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 493
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 311/526 (59%), Gaps = 66/526 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L L+ +A A AHDGQ R SGEP+IIHP+EVA IL ELELD +IAAGLLHD +EDT+
Sbjct: 19 LGLIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T+ ++ E FG + +V+G V+KLGK++ K S + +A+++R+M +AM +++R
Sbjct: 79 V-TYGQLLEYFGKEIADLVDG---VTKLGKIEYK----SKVEQQAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PEEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---TEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSAS 666
EI+ +S + WL+ K+ AR+KI ++ +++ S
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKEKEKKTS 483
>gi|373857672|ref|ZP_09600413.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
gi|372452804|gb|EHP26274.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
Length = 731
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 210/525 (40%), Positives = 319/525 (60%), Gaps = 57/525 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T +YL+ +E+V++A A AH Q R+SGEP+IIHP++VA IL +LE+D E++AAG
Sbjct: 16 TKAYLNVEHVEMVKKAYDFAKHAHRDQYRKSGEPYIIHPIQVAGILADLEMDPETVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+V T E I+ F V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTSV-TLEDIKTAFNDEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ ++K EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPFEKQRRISNETLEIFAPLAHRLGISKVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRS 375
E+ + Y N + Y R+ +L K+ E E+ L+ IE+ + + +++K E+
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQ---YLVDVIEEVRARMGEVSIKAELSG 240
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
K YSIY+ + NE+ + +RII+ + + CY VLG++H
Sbjct: 241 RPKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTC 288
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
W P+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH++
Sbjct: 289 WKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTSEMHEIAEFGIAAHWA 345
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
+ GK+ + ++ +++W I E+Q E + EF+++
Sbjct: 346 YK-----------------EGKSAS-DISSYEAKLTWFREILEFQNE---TDDAEEFMES 384
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ DL VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L
Sbjct: 385 LKIDLFSDMVFVFTPKGDVIELPAGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLK 444
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ + WL+ A+T A++KI +F ++Q
Sbjct: 445 TGDIIEILT-----SKHSYGPSQDWLKLAQTSQAKNKIRQFFKKQ 484
>gi|229013624|ref|ZP_04170755.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|423598283|ref|ZP_17574283.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|423660754|ref|ZP_17635923.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|423669987|ref|ZP_17645016.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|423673809|ref|ZP_17648748.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
gi|228747683|gb|EEL97555.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|401236553|gb|EJR43010.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|401299114|gb|EJS04714.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|401300795|gb|EJS06384.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|401310175|gb|EJS15500.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
Length = 727
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 767
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 218/576 (37%), Positives = 337/576 (58%), Gaps = 77/576 (13%)
Query: 99 SSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLAF 157
S L + K +++ +V +D PE L++ L I P+ ++ ++ +A +A
Sbjct: 2 SETLEIRPKEFKMVDGHAVKEPEDYQD-PELLYQSLIKRIREYHPSADISMIEKAYRIAK 60
Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
+AH+GQKR+SGEP+IIHP+ V IL ELE+D E+I AG+LHD VEDT ++T + IE EFG
Sbjct: 61 QAHEGQKRKSGEPYIIHPLWVGIILAELEMDKETIVAGILHDAVEDT-IMTRDDIEREFG 119
Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
A V +VEG V+KLG+L + ++ ++A++LR+MFLAM++++RVIIVKLADRLHN
Sbjct: 120 AEVALLVEG---VTKLGQLSYSKDVDKME-LQAENLRKMFLAMSKDIRVIIVKLADRLHN 175
Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
MRT PPHKQ A ET+ ++AP+A+ LG+ +IK EL++L+ Y E + + +++
Sbjct: 176 MRTAQFWPPHKQKEKARETMDIYAPIAQRLGISKIKKELDDLALKYYQPEVFYDLVKQIN 235
Query: 338 DLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSIN 395
D E E+ +++I D+ + ++ E+ K +SIYK ++ +++
Sbjct: 236 DRKTEREE--------FVQQIVDEVASHMKNADIQAEVYGRVKHFFSIYKKMVNQDKTVD 287
Query: 396 EVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGY 455
+V + +RII+ + CY LG++H ++TPIP KDYIA PK N Y
Sbjct: 288 QVYDLFAVRIIV------------DTVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMY 335
Query: 456 QSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPN 510
QSLHTTL+ PF E+QIRT+EM AE GIAAH+ +
Sbjct: 336 QSLHTTLMGPAGQPF--------EIQIRTKEMHKTAEYGIAAHWKYK------------- 374
Query: 511 GRSPRGKTVCLNNANIAL----RISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSR 564
S GK NIA+ ++SWL I EWQ+ N +REF+ + DL
Sbjct: 375 -ESGDGKK------NIAMQEEEKLSWLRQILEWQQ----NTDNREFLSLLKGGLDLFAED 423
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+ FTP G++KNLP G+T +D+AY IH+ +GNKMV A+VNG LV+ + + N + +EI+T
Sbjct: 424 VYCFTPNGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLVTIDYKIQNGDRIEILT 483
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
S+++ + WL K+ A++KI ++ +++
Sbjct: 484 -----SQNSKGPSRDWLSIVKSTQAKNKINQWFKKE 514
>gi|163942157|ref|YP_001647041.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus weihenstephanensis KBAB4]
gi|229135230|ref|ZP_04264029.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|229169150|ref|ZP_04296865.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|423368453|ref|ZP_17345885.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|423489585|ref|ZP_17466267.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
gi|423495308|ref|ZP_17471952.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|423497898|ref|ZP_17474515.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|423519105|ref|ZP_17495586.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|423591601|ref|ZP_17567632.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|163864354|gb|ABY45413.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus weihenstephanensis
KBAB4]
gi|228614378|gb|EEK71488.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|228648272|gb|EEL04308.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|401080780|gb|EJP89064.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|401151401|gb|EJQ58853.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|401160160|gb|EJQ67539.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|401161185|gb|EJQ68552.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|401231734|gb|EJR38236.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|402431821|gb|EJV63885.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
Length = 727
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADGDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
5692]
gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
5692]
Length = 733
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 214/530 (40%), Positives = 305/530 (57%), Gaps = 58/530 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ + L +YL +E L+++A + + AH GQ+R SGEP++ HP+EVA IL EL LD
Sbjct: 3 RINDILEKVSAYLPKSEQALIQKAYVFSASAHAGQRRLSGEPYLSHPLEVAHILAELRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAAGLLHDT+EDT +EE+FG V +IVEG V+K+GK++ S ++
Sbjct: 63 APTIAAGLLHDTLEDTQS-NVSDLEEQFGEEVAQIVEG---VTKIGKVRFT----SKEEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM E++RVIIVKLADRLHNMRTL H KQ I+ ET++++APLA LG
Sbjct: 115 QAENIRKMILAMAEDIRVIIVKLADRLHNMRTLQHQKGIKQRLISQETMEIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y++K +LE++SF Y + Y ++K V ++ +E ++ LD +
Sbjct: 175 LYRVKVQLEDISFQYLRPDVYYQIKSGVEQHQTLGQQYIERVTGLIQS------ILDENS 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ + K YSI+ + + S+++V+ + R+I+K + CY V
Sbjct: 229 IPGRVSGRQKHLYSIFHKMQRQGLSLDQVHDLVAFRVILKSV------------RDCYAV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGL+H IW P+P KDYI+ PK N YQSLHTT+I E R+E+QIRTEEM I E
Sbjct: 277 LGLIHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGE---RIEIQIRTEEMHEINEY 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G + +A+ R WL I +WQ+E
Sbjct: 334 GIAAHW-----------------KYKDGSNLSERDAD---RFRWLRQILDWQKEL---KD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
REF+ ++ DL V+VFTPRGE++ LP AT VD+AYMIHTE+GN AKVNG LV
Sbjct: 371 PREFMASLRFDLFQDEVYVFTPRGEVRELPDEATPVDFAYMIHTEVGNHCAGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
L N + VEIIT S + WL+ KT AR +I ++R
Sbjct: 431 PLDTALKNGDTVEIITDEKRSPS------RDWLKFVKTAKARTRIKHWIR 474
>gi|308174461|ref|YP_003921166.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens DSM 7]
gi|307607325|emb|CBI43696.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens DSM
7]
Length = 734
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++ V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI+ VG + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH+
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ A ++SW I E+Q E + + EF++++
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEIVT-----SKHSYGPSQDWIKLAQTSQAKHKIRQFFKKQ 484
>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 738
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 315/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EEEFG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEEFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|291460900|ref|ZP_06600232.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
gi|291380153|gb|EFE87671.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
Length = 515
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 320/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL E+++D +++ AGLLHD VEDT
Sbjct: 20 DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMEMKMDTDTVVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G V+KL L +N +A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVAVLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ +I+ ETL ++APLA LGM +IKSELE+LSF Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSELEDLSFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ E+Y ++KR V + +E + ++ + + + + D + +K E++ K YSIY
Sbjct: 190 HHEEYLEIKRLVENTKEERKDYIDNFIRTMKRTLVD------LGLKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYH+LG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHILGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N ++ + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKTSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+F F+P+G+I LP GAT +D+A+M+HT++G K + AKVNG +V+ H L + + VEIIT
Sbjct: 385 IFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCIGAKVNGRMVTIDHKLKSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + S++ D++
Sbjct: 445 -----SKNSKGPSIDWLDIVITHGAKGKIRKFLKDENKETVSKLGKDSL 488
>gi|423452296|ref|ZP_17429149.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|423470622|ref|ZP_17447366.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
gi|401139934|gb|EJQ47491.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|402436288|gb|EJV68320.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
Length = 727
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L ++++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVSIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM IAE GIAAH+
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHTTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ + +++W I EWQ E + EF++++
Sbjct: 345 --------AYKEGKAAE------TTGTLEKKLTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y +H+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFSYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|340753531|ref|ZP_08690310.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
gi|422316887|ref|ZP_16398262.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
gi|229423101|gb|EEO38148.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
gi|404590479|gb|EKA92877.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
Length = 725
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 318/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D +++ AGLLHD VEDT
Sbjct: 20 DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTVVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVAVLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ +I+ ETL ++APLA LGM +IKSELE+LSF Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSELEDLSFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ E+Y ++KR V + +E + +E + + + + D + +K E++ K YSIY
Sbjct: 190 HHEEYLEIKRLVENTKEERKDYIENFIRTMKRTLVD------LGLKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYH+LG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHILGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDKGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+F F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 IFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLRSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ S++ D++
Sbjct: 445 -----SKNSKGPSIDWLDIVITHGAKGKIRKFLKDENKEIVSKLGKDSL 488
>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M21]
gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
Length = 716
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 309/532 (58%), Gaps = 58/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L+L+R+A + + H GQ R SGEP++IHP+EVA IL +L LD
Sbjct: 3 RLNDILEKVASYNPGCDLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDTVEDT + T E +E FGA V R+V+G V+K+GK+ K + S
Sbjct: 63 LAAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ +IA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +K ELE+LSF Y + Y + +VA +E E + +I+ K++E+
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESYVATVKEIIKKQLEEH------G 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K ++ K YSIY+ + I+E+ + +R+ ++ + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVE------------DIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT EM +AE
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +W+ + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKDVK--------RFTWIRQLLEWQQEL---DD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
S+EF+DT+ +L VF+FTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L ++VE+IT + K WL+ K+ AR+KI +++ +
Sbjct: 431 PLKYELKTGDIVEVITSPHHTPS------KDWLKIVKSSRARNKIRAWVKTE 476
>gi|154686901|ref|YP_001422062.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|375363176|ref|YP_005131215.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|384266310|ref|YP_005422017.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385265645|ref|ZP_10043732.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387899344|ref|YP_006329640.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|394991954|ref|ZP_10384748.1| RelA [Bacillus sp. 916]
gi|421730833|ref|ZP_16169959.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429506052|ref|YP_007187236.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|451346089|ref|YP_007444720.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452856418|ref|YP_007498101.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|154352752|gb|ABS74831.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|371569170|emb|CCF06020.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|380499663|emb|CCG50701.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385150141|gb|EIF14078.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387173454|gb|AFJ62915.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|393807166|gb|EJD68491.1| RelA [Bacillus sp. 916]
gi|407074987|gb|EKE47974.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429487642|gb|AFZ91566.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|449849847|gb|AGF26839.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452080678|emb|CCP22443.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 734
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++ V +A + A AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 TYLPEEQIAFVEKAYLYAQNAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E +EE + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI+ VG + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH+
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ A ++SW I E+Q E + + EF++++
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>gi|294783445|ref|ZP_06748769.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
gi|294480323|gb|EFG28100.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
Length = 725
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +IIHPVEVA+IL ++++D +++ AGLLHD VEDT
Sbjct: 20 DFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTVVAGLLHDVVEDT 79
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 80 -LIPIADIKYNFGDTVAVLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ +I+ ETL ++APLA LGM +IKSELE+LSF Y
Sbjct: 130 RVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSELEDLSFSYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ E+Y ++KR V + +E + ++ + + + + D + +K E++ K YSIY
Sbjct: 190 HHEEYLEIKRLVENTKEERKDYIDNFIRTMKRTLVD------LGLKAEVKGRFKHFYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I++ K CYH+LG+VH +TP+P K
Sbjct: 244 KKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYHILGIVHSQYTPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 292 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 339
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N ++ + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 340 --YKENKKTSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 384
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+F F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 385 IFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLRSGDKVEIIT 444
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + S+I D++
Sbjct: 445 -----SKNSKGPSIDWLDIVITHGAKGKIRKFLKDENKETVSKIGKDSL 488
>gi|254994034|ref|ZP_05276224.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J2-064]
Length = 711
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 319/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 503
Query: 680 SGEESE 685
G ES+
Sbjct: 504 LGFESK 509
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 232/624 (37%), Positives = 333/624 (53%), Gaps = 84/624 (13%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S E+ELV++A +A AH QKR SGEP+I+HPVEVA IL ++ +D ++I AGLLHD +
Sbjct: 14 SNEEIELVKKAYEIANGAHKQQKRESGEPYIVHPVEVACILADMGMDADTIVAGLLHDVI 73
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT T+E +E EF V +VEG V+KLGK+K K S ++ +AD++R+M LAM
Sbjct: 74 EDTEY-TYEDVEREFNKQVADLVEG---VTKLGKIKYK----SKEEQQADNVRKMLLAMA 125
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
++VRVI++KLADRLHNMRTL +MP KQ A ET ++APLA LG+ +IK ELE+L+F
Sbjct: 126 QDVRVILIKLADRLHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAF 185
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y N +Y + +A E+ +E I + E + L+ +K++I K Y
Sbjct: 186 RYINPNEYYSFVKEIA------ERRVERIAYIELIVNELTKSLEGSGIKSDIEGRPKHFY 239
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY+ ++ +++++ + +RI L + CY LG+VH ++ PIP
Sbjct: 240 SIYRKMINKNKTLDQIFDLTAIRI------------LVDTVKDCYAALGIVHTMYKPIPG 287
Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
KDYIA PKPN YQSLH+T+I PF E+QIRT EM AE GIAAH+
Sbjct: 288 RFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHWKY 339
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +T N+ L+++WL I EWQ E + EF++
Sbjct: 340 KEGIT--------------------EENNMELKLTWLREILEWQRE---TSDATEFMEGF 376
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G + NLP +T +D+AY IHT+IGNK V AKVN +V + L
Sbjct: 377 KIDLFSDEVFVFTPKGSVINLPSKSTPIDFAYKIHTDIGNKCVGAKVNNRMVPLDYNLKT 436
Query: 617 AEVVEIIT-----------YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
E+VEIIT N + S A + K W + AK K ++L ++A
Sbjct: 437 GEIVEIITSSNSKGPSIDWLNIVKSNQAKSKIKSWFKKAKREENTSKGKEYLEKEAKKQG 496
Query: 666 SEITADTVGDF---VADSGEESEVEDLSDGSKQDKPLWEKILMNVVQMSSPVRNSKA--- 719
+ G+F + + +EDL + + I++ + N KA
Sbjct: 497 YNFGEISKGEFLNTILKKYSFNSIEDLYAAVGIGELIASNIVLKFKEQHE--HNHKANIS 554
Query: 720 ---VCSDDNASLWAPKVNGKHNKR 740
V D N + A K+N K +KR
Sbjct: 555 NEEVIEDFNKNTKANKINNKKSKR 578
>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
Length = 720
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 313/528 (59%), Gaps = 60/528 (11%)
Query: 143 PN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
PN +LEL+ A LA AH G +RRSGEP++ HP+ VA IL +L+LD E+IAA LLHD +
Sbjct: 10 PNADLELIHHAFELARSAHAGMRRRSGEPYLSHPLAVALILADLQLDQETIAAALLHDVL 69
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV-----QDVKADDLRQM 256
EDT+V T E++ E FG V R+V+G V+KLGK++ EN V + +A+ LR+M
Sbjct: 70 EDTDV-TIEQLRERFGPRVARLVDG---VTKLGKIRLSPENEPVSLEREKIRQAESLRKM 125
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
LAM E+V V+++KLADRLHNMRTL H+PP KQ IA ET++++APLA LG+ Q+K+EL
Sbjct: 126 LLAMAEDVGVVLIKLADRLHNMRTLDHLPPEKQRRIARETMEIYAPLANRLGIGQLKAEL 185
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y + Y + R + + E+ L+E + + + + D ++T +
Sbjct: 186 EDLAFKYLEPQTYETIARALESRGHDREQYLQEVIEQVKRALADAGIRAVVTGRE----- 240
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K SI + + + + + +E+ + +R+I+ Q+ CY L ++HG+W
Sbjct: 241 -KHIASIARKMREKQRNFDEIYDVLGIRVIV------------DEQRDCYAALAIIHGMW 287
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP DYIA PK N Y+SLHT +I LEVQIRT EM AE GIAAH+
Sbjct: 288 HPIPGQFDDYIANPKENLYRSLHTAVIG---PRGIPLEVQIRTHEMHREAEYGIAAHWRY 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +P+ + +I +I+W I EW++E + ++EFVD++
Sbjct: 345 K-------EQLKPDS----------GDRSIEAKIAWFRQILEWRDEL---LDAQEFVDSV 384
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+DLL ++VFTP+G++ LP GAT +D+AY IHTE+G++ V AKVNG +V + L N
Sbjct: 385 KQDLLPEMIYVFTPKGDVVELPAGATPIDFAYRIHTEVGHQCVGAKVNGQIVPLNYKLQN 444
Query: 617 AEVVEIITYNALSSKSAFQRHKQWL----EHAKTRSARHKIMKFLREQ 660
+VV+IIT SKS + WL + T SAR KI ++ R+Q
Sbjct: 445 GQVVQIIT-----SKSRTGPSRDWLIPSNGYVTTASAREKIRQWFRKQ 487
>gi|52081239|ref|YP_080030.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319644794|ref|ZP_07999027.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|404490119|ref|YP_006714225.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683219|ref|ZP_17658058.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
gi|52004450|gb|AAU24392.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349121|gb|AAU41755.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392603|gb|EFV73397.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|383439993|gb|EID47768.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
Length = 733
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 309/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + +++A A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHVAFIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T E ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTSV-TLEDLKEAFNEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E +EE + ++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVEEVVNEVKSRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMAMQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK +++ ++SW I E+Q E + + EF++++
Sbjct: 348 ----------------EGKNAN-EDSSFDKKLSWFREILEFQNE---SSDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W+ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWINLAQTSQAKHKIRQFFKKQ 484
>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
Length = 732
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 320/548 (58%), Gaps = 68/548 (12%)
Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
L PSV+ D E +R YL P +L+ +RRA AH GQKR SG+ FI
Sbjct: 5 LQPSVTPD-----------ELIRRAGRYLGPEDLDWLRRAFEFGKAAHQGQKRASGQDFI 53
Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
HP+ VA IL +LELD ++ A LLHDTVEDT V T E++E EFG+ V +V+G TK+++
Sbjct: 54 EHPLAVALILADLELDAATLVAALLHDTVEDTEV-TLEQVEREFGSEVALLVDGVTKLNQ 112
Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
+ E + + +A++LR+MFLAM ++RV+++KLADRLHNMRTL+ +P KQ +
Sbjct: 113 I-------EWRTRLEEQAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAK 165
Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
+ ETL++FAPLA LGM QI+ ELE+L+ Y E Y ++ R+ E E+ + +
Sbjct: 166 SRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERYRELSERIPRKRAEREELAQVIIR 225
Query: 353 ILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
L K+ + ++ +I+ K YSIY+ + + ++++ + +R+I+
Sbjct: 226 TLRAKLAE------AGIRADIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIV----- 274
Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+ CY LG+VH IW P+P KDYIATPK N YQSLHTT+I E
Sbjct: 275 -------DTVKDCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEP--- 324
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
E+QIRT +M AE GIAAH+ + RG+T + + +++W
Sbjct: 325 FEIQIRTWDMHRTAEYGIAAHWRYK----------------ERGRT----DKDFDAKLAW 364
Query: 533 LNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
L + EWQ + G+ +REF++++ D+ VFVFTP+G++ +LP G+T VD+A+ IHT
Sbjct: 365 LRQVLEWQNDL-GD--AREFMESLKIDVFSDEVFVFTPKGDVIDLPAGSTPVDFAFRIHT 421
Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHK 652
EIG++ V AKVNG +V + L N ++VEI+T S SA WL+ +T +AR +
Sbjct: 422 EIGHRCVGAKVNGRIVPLDYRLKNGDIVEILTSKQSSGPSA-----DWLQFVRTSTARSR 476
Query: 653 IMKFLREQ 660
I ++L++Q
Sbjct: 477 IRQWLKKQ 484
>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
gi|197088939|gb|ACH40210.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter bemidjiensis Bem]
Length = 716
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 309/532 (58%), Gaps = 58/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L+L+R+A + + H GQ R SGEP++IHP+EVA IL +L LD
Sbjct: 3 RLNDILEKVASYNPGCDLDLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDTVEDT + T E +E FGA V R+V+G V+K+GK+ K + S
Sbjct: 63 LPAVVTGLLHDTVEDT-LTTHEELESLFGAEVARLVDG---VTKIGKIHFKTKEES---- 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ +IA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +K ELE+LSF Y + Y + +VA +E E + +I+ K++E+
Sbjct: 175 ISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESYVATVKEIIKKQLEEH------G 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K ++ K YSIY+ + I+E+ + +R+ ++ + CY V
Sbjct: 229 IKGDVSGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVE------------DIRECYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT EM +AE
Sbjct: 277 LGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGE---RMEVQIRTVEMHRVAES 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +W+ + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDDKDVK--------RFTWIRQLLEWQQEL---DD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
S+EF+DT+ +L VF+FTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SKEFMDTVKVELFPEDVFIFTPKGDVKGFPKGSTPIDFAYSVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L ++VE+IT + K WL+ K+ AR+KI +++ +
Sbjct: 431 PLKYELKTGDIVEVITSPHHTPS------KDWLKIVKSSRARNKIRAWVKTE 476
>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
Length = 726
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 219/524 (41%), Positives = 308/524 (58%), Gaps = 57/524 (10%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I PN + ELV RA + A EAH GQ R SGE FI HP++VA IL +L+LD SI AGL
Sbjct: 10 IEQYYPNFDRELVERAYLFAKEAHRGQFRNSGEAFIEHPLQVACILADLQLDITSIVAGL 69
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN + + IE +FG VR +V G V+KLGK++ K S +D A++LR+M
Sbjct: 70 LHDVVEDTNT-SLQDIETDFGPEVRFLVAG---VTKLGKIEYK----SKEDRHAENLRKM 121
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM ++RVI++KLADRLHN+RTL KQ IA ETL++FAP+A LG+Y+IK E+
Sbjct: 122 FLAMARDIRVILIKLADRLHNLRTLGAHEVPKQREIARETLEIFAPVAHRLGIYKIKWEM 181
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y + Y ++ R+A KE E + N ++ K E L +K EI
Sbjct: 182 EDLAFRYLEPDKYYELADRIAKKRKEREDYI---NLVITKLREK---LTEAGIKAEISGR 235
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ ++ ++E+ + +R+I++ + CY LG+VH +W
Sbjct: 236 PKNFYSIYRKMVDQGKDLSEIYDLVAVRVIVE------------TVKECYATLGIVHTMW 283
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP KDYIA PK N YQSLHTTL+ L E E+QIRT EM AE GIAAH+
Sbjct: 284 KPIPGRFKDYIAMPKQNMYQSLHTTLVGPLGEP---FELQIRTFEMHRTAEYGIAAHW-- 338
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GR LN+ ++SWL I EWQ E +REF++++
Sbjct: 339 ---------RYKEGGR--------LNDPEFEKKLSWLRQILEWQHEL---RDAREFMESL 378
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IHTE+G++ + AKVNG +V + L N
Sbjct: 379 KIDLFSDVVFVFTPKGDVVELPSGSVPIDFAYRIHTEVGHRCIGAKVNGRIVPLDYRLKN 438
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK + + WL KT A+++I ++ +++
Sbjct: 439 GDIVEILT-----SKQSGGPSRDWLSIVKTSQAKNRIRQWYKKE 477
>gi|384165231|ref|YP_005546610.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
gi|328912786|gb|AEB64382.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
Length = 734
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++ V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI+ VG + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH+
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ A ++SW I E+Q E + + EF++++
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWIKLAQTSQAKHKIRQFFKKQ 484
>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
Length = 731
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 311/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ +VR+A A AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG
Sbjct: 16 TKEYLNEEHAGVVRKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPSTVAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T I E F V +V+G V+KLGK+K K++ ++ +A++ R+M
Sbjct: 76 LHDVVEDTEV-TLADISEAFNPEVAMLVDG---VTKLGKIKYKSQ----EEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y ++ + E E LEE + K +D ++++ ++
Sbjct: 188 EDTALRYLNPQQYYRIVNLMKKKRAERELYLEEVIGEMKGK------MDEVSIRADLSGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + NE+ + +RI++ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT+I + LEVQIRT EM IAE GIAAH++
Sbjct: 290 KPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTTEMHQIAEFGIAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKTV ++ +++W I E+Q++ V + EF++++
Sbjct: 347 K-----------------EGKTVN-EGSSFEEKLTWFREILEFQDDSV---NAEEFMESL 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L
Sbjct: 386 KIDLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ K WL+ A+T A++KI +F ++Q
Sbjct: 446 GDILEILT-----SKHSYGPSKDWLKLAQTTQAKNKIRQFFKKQ 484
>gi|312864406|ref|ZP_07724639.1| GTP diphosphokinase [Streptococcus downei F0415]
gi|311100127|gb|EFQ58338.1| GTP diphosphokinase [Streptococcus downei F0415]
Length = 766
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 320/522 (61%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P+++ +V++AL A EAH QKR+SGEP+I+HP++VA IL L+LD ++A G LH
Sbjct: 44 TYMTPDDVAIVQKALDYATEAHKTQKRQSGEPYIVHPIQVAGILAGLQLDAVTVACGFLH 103
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E +E +FG V +IV+G V+KLGK+K K+ + A++ R+M +
Sbjct: 104 DVVEDTEV-TLEDLERDFGLKVSQIVDG---VTKLGKVKYKSHEEQL----AENHRKMLM 155
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ P KQ I+ ET++++APLA LG+ IK ELE+
Sbjct: 156 AMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAPLAHRLGISAIKWELED 215
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K+ + + +E E ++E +++KI+ + ++ +I K
Sbjct: 216 LAFRYLNEAEFYKISHMMHEKRRERESLVDE----IVEKIK--AYTAEQGLQGKIYGRPK 269
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + R +++ + +R I+ +P + Y +LG +H +W P
Sbjct: 270 HIYSIYRKMRDKRKRFDQIYDLIAIRCIMD-----------TPSDV-YAMLGYIHELWRP 317
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 318 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTQEMHEVAEYGVAAHWAYKK 373
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V + A+ ++W+ + E Q G+ ++EFVD++
Sbjct: 374 GIKGKV-----------------DAQESAIGMNWIQDLVELQAGSNGD--AQEFVDSVKE 414
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +R++VFTP G+++ LP+ + +D+AY IHT++G K V AKVNG +V T L +
Sbjct: 415 DIFSARIYVFTPSGDVQELPRDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKTGD 474
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T ++++F + W++ KT AR+KI +F + Q
Sbjct: 475 VVEIVT-----NQNSFGPSRDWIKLVKTTKARNKIRQFFKNQ 511
>gi|256845985|ref|ZP_05551443.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
gi|256719544|gb|EEU33099.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
Length = 724
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 318/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+L+F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDLAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++K+ V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I+ K CYHVLG+VH +TP+P K
Sbjct: 243 KKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDKIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 444 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 487
>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 724
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 313/532 (58%), Gaps = 58/532 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L E + I Y ++ L+ +A A +AH QKR SGEPFI HPV VA IL L++D
Sbjct: 11 LQELVHRVILYHPQADVALLSKAYRFAEQAHRDQKRISGEPFITHPVAVAHILANLQMDL 70
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++ AGLLHD VEDT V T E I+ FG V +V+G TK+S+L E S ++ +
Sbjct: 71 QTLVAGLLHDVVEDTGV-TLEEIKTAFGDEVALLVDGVTKLSRL-------EYRSKEEHQ 122
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFLAM +++RVI++KLADRLHN+RTL + KQ IA ETL+++APLA LG+
Sbjct: 123 AENLRKMFLAMAQDIRVILIKLADRLHNLRTLKYHTETKQKEIARETLEIYAPLAHRLGI 182
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y +K ELE+LSF Y E Y ++ RV+ ++ E+ + A +IL +K+ + +
Sbjct: 183 YHLKWELEDLSFRYLEPEKYYELAERVSRTRRKREEYIRTAIQILRRKLAE------AGI 236
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
+I+ K YSIY + K + ++E+ + +R+I++ + CY VL
Sbjct: 237 FADIQGRPKHLYSIYTKMEKQQKDLSEIYDVMAVRVIVESI------------RDCYAVL 284
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G VH +W PIP KDYIA PK N YQSLHTT++ E LE+QIRT EM AE G
Sbjct: 285 GTVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVVGPQGEP---LEIQIRTREMHRTAEYG 341
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + G++ R ++ +++WL I EWQ E +
Sbjct: 342 IAAHW-----------RYKEGGKTDR---------DLDQKLAWLRQILEWQREL---RDA 378
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
REF++++ DL VFVFTP+G++ LP G+ +D+AY +HTE+G++ V A+VNG +V
Sbjct: 379 REFMESLKIDLFADSVFVFTPKGDVIELPAGSVPIDFAYRVHTEVGHRCVGARVNGRIVP 438
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK-FLREQ 660
+ L N ++VEI+T SK+A + WL KT A+++I + F REQ
Sbjct: 439 LDYQLKNGDIVEILT-----SKNAVGPSRDWLNVVKTSQAKNRIRQWFKREQ 485
>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
Length = 724
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 315/529 (59%), Gaps = 69/529 (13%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I +PN + L+ +A L+ EAH GQ+R SG+PFI+HP+EVA IL +LELD +I AG+
Sbjct: 12 IKKYNPNCDFALIEKAHNLSLEAHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGI 71
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T E+I E FG V +V+G V+KLGK+ + ++++A++LR+M
Sbjct: 72 LHDIVEDTSY-TIEQIRENFGDEVANLVDG---VTKLGKIPYTTK----EELQAENLRKM 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +MP KQ A ETL+++APLA LG+ +IK EL
Sbjct: 124 FLAMAKDIRVILIKLADRLHNMRTLKYMPTEKQIEKAKETLEIYAPLAHRLGISKIKWEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y + + Y + ++A +E E + E K + +K + + + I
Sbjct: 184 EDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE------IGIDAHIEGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ +++ +I ++ + +R+I+ + + CY VLGLVH I+
Sbjct: 238 PKHFYSIYRKMVQQNKTIEQIYDLFAVRVIV------------TTVKDCYAVLGLVHEIF 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIA 491
P+P KDYIA PKPN YQSLHTTLI PF EVQIRT EM +AE GIA
Sbjct: 286 KPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPF--------EVQIRTWEMHRVAEVGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + GK+ + +++WL + EWQ+E + E
Sbjct: 338 AHW-----------------KYKEGKSA----DDYDNKLAWLRQLLEWQKEM---RDASE 373
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL VFVFTP+G++ +LP G+T +D+AY IH+ IGNKM AKVN +V
Sbjct: 374 FMETLKIDLFTDEVFVFTPKGDVISLPAGSTPIDFAYAIHSAIGNKMSGAKVNNKIVPID 433
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VL N ++VEI+T + + S + WL+ K+ A++KI ++ +++
Sbjct: 434 YVLQNGDIVEILTSSNVQGPS-----RDWLKIVKSSQAKNKINQWFKKE 477
>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
Length = 716
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/530 (39%), Positives = 303/530 (57%), Gaps = 58/530 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L ++Y +L L+R+A + + H GQ R SGEP+IIHP+EVA +L L+LD
Sbjct: 3 RLNDILDTVVTYNPSADLNLIRKAYVYCAKVHQGQTRLSGEPYIIHPLEVAGLLAGLKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SI G LHDT+EDT + T E + E FG V +V+G TK+SK+ K K EN
Sbjct: 63 VPSIVTGFLHDTIEDT-LTTSEELAEMFGKEVAELVDGVTKISKI-HFKTKEEN------ 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM ++RVI+VKLADRLHNMRTL P KQ SI+ ET+ ++AP+A LG
Sbjct: 115 QAENFRKMLIAMANDIRVILVKLADRLHNMRTLQFQPDTKQRSISRETMDIYAPIAHRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y + Y + ++ +E E + E + + +K+ + Q +
Sbjct: 175 ISWIKTELEDLSFRYLQPDVYFDLATKIQRKKQERESFIHEIQEAIRQKLVEHQIVG--- 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
E+ K YSIY+ + K + E+ + LRI L + CY V
Sbjct: 232 ---EVSGRSKHLYSIYRKMEKRKVDFEEIYDLTALRI------------LVDDIKSCYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGL+H W PIP KDYIA PK N YQSLHTT+I + R+EVQIRT EM +AE
Sbjct: 277 LGLIHSSWRPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGD---RMEVQIRTHEMHRVAEA 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G+ K V R +WL + EWQ+E
Sbjct: 334 GIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---QD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREF+D++ +L V+VFTP+G++K PKG+T +D+AY +HT++G++ V AKVNG LV
Sbjct: 371 SREFMDSVKVELFPEEVYVFTPKGDVKGFPKGSTPIDFAYAVHTDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
H L N ++VE+IT + K WL+ ++ AR+KI +++
Sbjct: 431 PLKHELQNGDIVEVITSPHHTPS------KDWLKIVRSSRARNKIRAWIK 474
>gi|46907751|ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224124|ref|YP_002758231.1| (p)ppGpp synthetase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824418|ref|ZP_05229419.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|254852146|ref|ZP_05241494.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|254931458|ref|ZP_05264817.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|300764810|ref|ZP_07074800.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|386732261|ref|YP_006205757.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404281082|ref|YP_006681980.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404286945|ref|YP_006693531.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749867|ref|YP_006673333.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|405752743|ref|YP_006676208.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|405755681|ref|YP_006679145.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|406704296|ref|YP_006754650.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|417316063|ref|ZP_12102721.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|424714398|ref|YP_007015113.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823285|ref|ZP_18248298.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225876586|emb|CAS05295.1| Putative (p)ppGpp synthetase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258605450|gb|EEW18058.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|293583010|gb|EFF95042.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|293593653|gb|EFG01414.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|300514486|gb|EFK41543.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|328465560|gb|EGF36789.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|332311965|gb|EGJ25060.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|384391019|gb|AFH80089.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404219067|emb|CBY70431.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|404221943|emb|CBY73306.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|404224881|emb|CBY76243.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|404227717|emb|CBY49122.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404245874|emb|CBY04099.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361326|emb|CBY67599.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|424013582|emb|CCO64122.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 738
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 319/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 503
Query: 680 SGEESE 685
G ES+
Sbjct: 504 LGFESK 509
>gi|357236902|ref|ZP_09124245.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
gi|356884884|gb|EHI75084.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
Length = 740
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 327/543 (60%), Gaps = 54/543 (9%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P ++ LV++AL A EAH Q+R+SGEP+IIHP++VA IL +L+LD ++A G LH
Sbjct: 18 TYMAPADVALVQKALDYATEAHKTQRRQSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E +E +FG V +IV+G V+KLGK+K K+ + A++ R+M +
Sbjct: 78 DVVEDTEV-TLEDLERDFGLKVSQIVDG---VTKLGKVKYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ P KQ I+ ET++++APLA LG+ IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAPLAHRLGISAIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K+ + + +E E ++E +++KI++ + + +I K
Sbjct: 190 LAFRYLNEVEFYKISHMMHEKRRERESLVDE----IVEKIKN--YTAEQGLHGKIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R I + +P + Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCI-----------MDTPSDV-YAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTQEMHEVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V + A+ ++W+ + E Q G+ ++EFVD++
Sbjct: 348 GIKGKV-----------------DAQESAIGMNWIQDLVELQAGSNGD--AQEFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +R++VFTP G+++ LP+ + +D+AY IHT++G K V AKVNG +V T L +
Sbjct: 389 DIFSARIYVFTPSGDVQELPRDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
VVEI+T ++++F + W++ KT AR+KI +F + Q + D + D+
Sbjct: 449 VVEIVT-----NQNSFGPSRDWIKLVKTTKARNKIRQFFKNQDKEMSISKGRDLLIDYFQ 503
Query: 679 DSG 681
+ G
Sbjct: 504 EQG 506
>gi|217964330|ref|YP_002350008.1| GTP pyrophosphokinase [Listeria monocytogenes HCC23]
gi|290893882|ref|ZP_06556860.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|386008294|ref|YP_005926572.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|386026896|ref|YP_005947672.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404407961|ref|YP_006690676.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
gi|217333600|gb|ACK39394.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Listeria
monocytogenes HCC23]
gi|290556599|gb|EFD90135.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|307571104|emb|CAR84283.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|336023477|gb|AEH92614.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404242110|emb|CBY63510.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
Length = 738
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 319/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 503
Query: 680 SGEESE 685
G ES+
Sbjct: 504 LGFESK 509
>gi|421144446|ref|ZP_15604359.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|395489103|gb|EJG09945.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 724
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G V+KL L +N +A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+L+F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDLAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++K+ V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I+ K CYHVLG+VH +TP+P K
Sbjct: 243 KKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDEIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 444 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 487
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 311/520 (59%), Gaps = 66/520 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L L+ +A A AHDGQ R SGEP+IIHP+EVA IL ELELD +IAAGLLHD +EDT+
Sbjct: 19 LGLIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTD 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
V T+ ++ E FG + +V+G V+KLGK++ K++ +A+++R+M +AM +++R
Sbjct: 79 V-TYGQLLEYFGKEIADLVDG---VTKLGKIEYKSKVEQ----QAENMRKMLIAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL ++P KQ A ETL+++AP+A LG+ +IK ELE+L Y +
Sbjct: 131 VILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLH 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++Y + +VA KE E+ ++ + +K+++ M ++ E+ K YSIYK
Sbjct: 191 PDEYYDLVEKVAAKRKEREEFIQNIITTIKEKLKE------MGIQAEVDGRPKHFYSIYK 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + ++ + +RII+ + + CY VLG+VH +W PIP KD
Sbjct: 245 KMKTQNKTFEQIYDLLAVRIIV------------NTVKDCYGVLGIVHTLWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 YIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWEMHKTAEYGIAAHW------ 338
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ GKT + ++SWL + EWQ+E ++EF++T+ DL
Sbjct: 339 -----------KYKEGKT---SEDEFDQKLSWLRQLLEWQKEL---KDAKEFMETLKIDL 381
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+G++ NLP G+T +D+AY IHTEIG+++ AKVNG +V + L N ++V
Sbjct: 382 FTDEVFVFTPKGDVINLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPINYQLKNGDIV 441
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
EI+ +S + WL+ K+ AR+KI ++ +++
Sbjct: 442 EIL----VSPNKDRGPSRDWLQIVKSSQARNKIRQWFKKE 477
>gi|47094426|ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
Length = 724
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 319/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 5 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 64
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 65 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 116
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 117 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 176
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 177 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 230
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 231 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 278
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 279 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 330
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 331 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 374
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 375 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 434
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 435 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 489
Query: 680 SGEESE 685
G ES+
Sbjct: 490 LGFESK 495
>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
gi|149833344|gb|EDM88425.1| RelA/SpoT family protein [Ruminococcus obeum ATCC 29174]
Length = 776
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 325/543 (59%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+E+L ++ P+ ++ ++++A +A EAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 40 SPEVLYEELIASVKKYHPSTDISMIQKAYEVAREAHKDQKRKSGEPYIIHPLCVAIILAD 99
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT +T E +E+EF A V +V+G V+KLG+L +
Sbjct: 100 LELDKETIVAGLLHDAVEDT-WMTIEEVEKEFSAEVALLVDG---VTKLGQLSYSADKVE 155
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 156 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 212
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +VA L K +E N I+ K+++ Q +
Sbjct: 213 MRLGISKIKVELDDLSLKYLKPDVYYDLVDKVA-LRKSERQEF--VNNIV-KQVK--QHM 266
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
D ++K ++ K +SIYK ++ +I+++ + +RI L +
Sbjct: 267 DEASIKAQVDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 314
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 315 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 366
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G+ P K +++WL I EW
Sbjct: 367 FEMHKTAEYGIAAHWKYK---------ESSDGKVPVDKRE-------EEKLNWLRQILEW 410
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q++ N REF+ + DL V+ FTP+G++KNLP G+T +D+AY +H+ +GN+
Sbjct: 411 QKDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKNLPNGSTPIDFAYSVHSAVGNR 467
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV + + N + +EIIT S+++ + WL K+ A++KI ++
Sbjct: 468 MVGARVNGKLVPIEYQIKNGDRIEIIT-----SQNSQGPSRDWLNLVKSTQAKNKINQWF 522
Query: 658 REQ 660
+++
Sbjct: 523 KKE 525
>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
Length = 832
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 210/527 (39%), Positives = 299/527 (56%), Gaps = 62/527 (11%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
++L ++R A + + H QKR SGEP++IHP+EVA++L EL++D +IAAGLLHD VED
Sbjct: 112 DDLAIIRSAWIFCMQQHATQKRASGEPYVIHPLEVAQVLAELKMDSTAIAAGLLHDAVED 171
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T+V T E I + FG V IVEG V+KL K+K N +D +A+++R+M LAM +
Sbjct: 172 TDV-TPEEIAKRFGEQVAHIVEG---VTKLDKIKFANR----EDHQAENIRKMLLAMVTD 223
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
VRV+I+KLADRLHNMRTL H+ P KQ IA ETL+++APLA LGM +++ ELE+L+F Y
Sbjct: 224 VRVVIIKLADRLHNMRTLEHLKPEKQQRIARETLEIYAPLAHRLGMGKLRGELEDLAFRY 283
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
T+ Y ++ V L E E L L K+ + + + S K YSI
Sbjct: 284 TDPFQYTQLTTEVDSLRGEGEAFLHRIVSTLEAKLRE------ANINARVESRIKRLYSI 337
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
+ + + +++V + +R+I + +Q CY LGL+H W P+P
Sbjct: 338 QQKLTAHQIPVDQVYDLFAIRVITQ------------TEQDCYAALGLLHSTWRPVPGRF 385
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KD+IA P+PN YQSLHTTLI E + EVQIRTE+M +AE GIAAH+
Sbjct: 386 KDFIAMPRPNMYQSLHTTLIA---EGAHQFEVQIRTEDMHQVAEEGIAAHW--------- 433
Query: 504 VGHARPNGRSPRGKTVCLNNANIA--LRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
K +N + A R++W+ + EWQ E EF+ T+ DL
Sbjct: 434 -------------KYKASDNVSAADEQRLAWVRQLMEWQREMT---DPNEFMSTLRIDLY 477
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
+ V+ FTP+G++ LPK T VD+AY IHT++G+ AKVNG +V H L N ++VE
Sbjct: 478 PAEVYTFTPKGKVIVLPKDGTPVDFAYAIHTDVGHTTTGAKVNGRIVPLRHKLRNGDIVE 537
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
I S+++ + WL K+ AR+KI +L E A EI
Sbjct: 538 I------STQAGHAPSRDWLSFTKSSRARNKIKHWLNENQRARALEI 578
>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
Length = 762
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 318/540 (58%), Gaps = 62/540 (11%)
Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
P L+E L+ +I Y +L L+ +A +A +AH GQKR+SGEP+IIHP+ VA IL +L
Sbjct: 25 PSELFEILKKSILDYHPSTDLSLIEKAYKVADKAHSGQKRKSGEPYIIHPLCVAIILAQL 84
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD E+I AG+LHD +EDT V T+E I EFG V +V+G TK+++L N H
Sbjct: 85 ELDKETIIAGILHDVIEDTEV-TYEDISREFGEEVALLVDGVTKLTQL------NYEHDK 137
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+++A++LR+MFLAM +++RVI++KLADRLHNMRT+ + P KQ + ET+++++P+A+
Sbjct: 138 IEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQKPEKQIEKSRETMEIYSPIAQ 197
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKEL-EEANKILMKKI--EDDQ 362
LG+ +IK EL++LS MY + Y K+ EH+ L +EA + +K+I E +
Sbjct: 198 RLGISKIKVELDDLSLMYLQPDVYHKL---------EHDLTLGKEARENFVKEIVAEVKE 248
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
L + I K +SIYK ++ +++++ + +RII+
Sbjct: 249 KLSTTGINYTIDGRVKHFFSIYKKMVNQDKTLDQIYDLFAVRIIV------------DTI 296
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY VLGL+H ++ PIP KDYIA PKPN YQSLHTTLI ++ E+QIRT EM
Sbjct: 297 KDCYAVLGLIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---QTGQPFEIQIRTYEM 353
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
AE GIAAH+ + + G G +++WL I EWQ +
Sbjct: 354 HRTAEYGIAAHWKYKENIDGTKGDDSEEA-----------------KLTWLRQILEWQRD 396
Query: 543 FVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
N +EF+ I DL V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV
Sbjct: 397 MSDN---KEFLSIIKSDLDLFSDSVYCFTPQGDVKNLPAGSTPIDFAYSIHSAVGNKMVG 453
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
AKVNG LV + + N + +E+IT S+++ + WL+ K+ A++KI + + +
Sbjct: 454 AKVNGKLVPIDYKIKNGDRIEVIT-----SQNSKGPSRDWLKVVKSPQAKNKINSWFKAE 508
>gi|291561450|emb|CBL40249.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SS3/4]
Length = 761
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 321/543 (59%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SP+ L+ DL +I P ++L ++ +A LA AH QKR+SGEP+IIHP+ VA IL +
Sbjct: 21 SPDVLYRDLVASIRKYHPSDDLSMIEKAYQLADNAHKDQKRKSGEPYIIHPLCVAIILAD 80
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT V T E++ E FG V +V+G TK+++L K E
Sbjct: 81 LEMDKETIAAGLLHDVVEDT-VYTEEQLAELFGKEVALLVDGVTKLTQLSWSADKVE--- 136
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ A ET+++++PLA
Sbjct: 137 ---MQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMRPEKQKEKARETIEIYSPLA 193
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++L+ Y Y +++ ++A + +K +++ + +E+ +
Sbjct: 194 DRLGISKIKIELDDLALRYLEPNVYKELEEKIALTSEARQKFIDDIISEIKTHMENAE-- 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ E+ K +SIYK +L +++++ I +RII+ +
Sbjct: 252 ----IRCEVNGRVKHFFSIYKKMLNQHKTLDQIYDIFAVRIIV------------DSVKD 295
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 296 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGTNGQPF--------EIQIRT 347
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G V + A ++SWL I EW
Sbjct: 348 FEMHRTAEYGIAAHWKYKESGSGQVAA-----------------GDEAKKLSWLRQILEW 390
Query: 540 QEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q++ N +EF++ I DL V+ FTP G++K LP G+T +D+AY IHT +GNK
Sbjct: 391 QQDMSDN---KEFLNAIKSDLDMFSDSVYCFTPTGDVKALPSGSTPIDFAYSIHTAVGNK 447
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ +V+ N + +E++T S+++ + WL K+ AR+KI +
Sbjct: 448 MVGARVNGKLVNIDYVIQNGDRIEVMT-----SQNSKGPSRDWLNIIKSSQARNKINAWF 502
Query: 658 REQ 660
+++
Sbjct: 503 KQE 505
>gi|158320743|ref|YP_001513250.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus oremlandii OhILAs]
gi|158140942|gb|ABW19254.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus oremlandii OhILAs]
Length = 724
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 315/537 (58%), Gaps = 66/537 (12%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I +P + EL+ +A A +AH GQ R+SGE + IHPVEVARIL +L++D
Sbjct: 2 MLEDLINKIKEYNPQCDFELITKAFNYAEKAHQGQYRKSGEDYFIHPVEVARILIDLQMD 61
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I AGLLHD +EDT ++ ++EEFG + +VEG TK+++L +S ++
Sbjct: 62 ASTIVAGLLHDVIEDTEY-GYDMVKEEFGVEIADLVEGVTKITRLS-------FNSKEER 113
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++LR+M LAM +++RVI++KLADRLHNMRTL P KQ ATETL++FAP+A LG
Sbjct: 114 QAENLRKMVLAMAKDIRVILIKLADRLHNMRTLKFQNPEKQKEKATETLEIFAPIANRLG 173
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE++ Y + + Y + +V+ K+ E + + + L +K+ED
Sbjct: 174 ISRIKWELEDICLRYIDPQGYYDLVEKVSQKRKDRENFISDIIETLREKLED------FD 227
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ EI K YSIY+ + S +E+ +R+I+ + + CY V
Sbjct: 228 IENEITGRPKHFYSIYRKMTYQGKSFDEIFDFMAVRVIV------------NSVKDCYGV 275
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+VH IW PIP KDYIA PKPN YQSLHTT+I PF E+QIRT EM
Sbjct: 276 LGVVHTIWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGDPF--------EIQIRTFEMH 327
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
IAE GIAAH+ + G+T + N ++++WL + EW++E
Sbjct: 328 QIAEYGIAAHW-----------------KYKEGRTETVEQQN-DMKLAWLRQMLEWEKEI 369
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+EF++++ DL + VFVFTP+GE+ NLP G+T +D+AY IH+ +GNK V AKV
Sbjct: 370 ---KDPKEFMESLKIDLFSNEVFVFTPKGEVVNLPIGSTPIDFAYKIHSGVGNKCVGAKV 426
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+G +V + L N +V+I+T S ++ + WL+ K+ A+ KI ++ +++
Sbjct: 427 DGRIVPIDYKLKNGNIVQILT-----SSNSMGPSRDWLKIVKSSQAKSKIKQWFKKE 478
>gi|315303282|ref|ZP_07873919.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
gi|313628349|gb|EFR96845.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
Length = 738
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 319/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEAFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLNDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMTEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDY+A PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYVAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 503
Query: 680 SGEESE 685
G E++
Sbjct: 504 LGFETK 509
>gi|237742590|ref|ZP_04573071.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294784891|ref|ZP_06750179.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
gi|229430238|gb|EEO40450.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294486605|gb|EFG33967.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
Length = 724
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G V+KL L +N +A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+L+F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDLAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++K+ V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKKLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +R+I+ K CYHVLG+VH +TP+P K
Sbjct: 243 KKMYQKGKEFDDIYDLMGVRVIVDDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDEIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + ++I D +
Sbjct: 444 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGKDNL 487
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 316/534 (59%), Gaps = 60/534 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L YLS + L+++A + + AH GQ R SGEP++ HP+EV+ +L +L LD
Sbjct: 3 RINEILDKVSGYLSGPDQALIQKAYVFSASAHAGQIRLSGEPYLSHPLEVSDMLADLHLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++IAAGLLHDTVEDT + E + ++FG V RIV+G TK+ K+ S ++
Sbjct: 63 ADTIAAGLLHDTVEDTKA-SLEEVRDQFGEEVARIVKGVTKIGKMS-------FDSKEEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM +++RVI+VKLADRLHNM+TL H KQ ++A ET+ ++APLA LG
Sbjct: 115 QAENIRKMILAMADDIRVILVKLADRLHNMKTLEHQSSFKQKAVAQETMDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y++K +LE+LS Y + Y +++ V E+ +++ + + IE + L+ +
Sbjct: 175 LYRLKIQLEDLSLRYMKPDVYFQIQEGVNKQKVVGEQYIQK----VCQNIE--EILEQNS 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ + K YSIY +++ S+++V I R++++ + CY V
Sbjct: 229 IEGRVSGRMKHIYSIYHKMVQQGLSLDQVFDIIAFRVLVQSI------------KDCYAV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH IW P+P KDYI+ PK N YQSLHTT+I E R+E+QIRTEEM +AE
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGE---RIEIQIRTEEMHKMAEF 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+A+H+ + +G++ R K A R SWL I +WQEE
Sbjct: 334 GVASHW-----------RYKEDGKN-RFKD------KDAERFSWLRQILDWQEEL---KD 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
REF+ ++ DL V+VFTPRGE+K LP+GAT +D+AYMIHTE+G++ AKVNG LV
Sbjct: 373 PREFMASLRFDLFEDEVYVFTPRGEVKELPEGATPIDFAYMIHTEVGDRCAGAKVNGKLV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
VL N + VEIIT RH + WL KT AR ++ +++R +
Sbjct: 433 PLNTVLKNGDTVEIITDP--------HRHPSRDWLRLVKTAKARTRVKQWIRNE 478
>gi|295426083|ref|ZP_06818753.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
gi|295064252|gb|EFG55190.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
Length = 749
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 319/566 (56%), Gaps = 64/566 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V +A A +AH GQKR SG+P+I+HP +VA L L LD ++IAAG LHD
Sbjct: 19 YMNDEQIAFVEKAYEFANKAHAGQKRASGQPYIMHPTQVAGTLAALGLDPDTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I++EFG V IV+G V+KL K + K S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKKEFGEDVAFIVDG---VTKLNKYQYK----SHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ VA E EK + +A +L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLVAVKRSEREKYISDAISVLKKT------LDNLGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------TVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGRPLEIQIRTQQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFSGVQETSSGDKLDMFREILELKDE---TKDADEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLKNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
++I+T NA S+ W++ KT AR+KI ++ R Q ++ E V D +
Sbjct: 450 IDIMTQSNATPSRD-------WVDMVKTSRARNKIRRYFRSQDRENSIEHGKQEVADLLR 502
Query: 679 DSGEESEVEDLSDGSKQDKPLWEKIL 704
++G L+ DK EKIL
Sbjct: 503 ENG-------LNAKEFMDKEHIEKIL 521
>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 727
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 307/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++ELV RA A +AH Q R+SGEP+IIHP++VA IL +L +D +++AG LH
Sbjct: 18 QYLADEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E IE EF + +V+G V+KLGK+K K+ H Q +A++ R+MF+
Sbjct: 78 DVVEDTEI-TLEDIEREFNKEIAMLVDG---VTKLGKIKYKS--HEQQ--QAENHRKMFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y R+ +L K E EE +M I + L + ++ EI K
Sbjct: 190 TSLRYLNPQQYY----RIVNLMKRKRAEREEYLDEVMTGIREK--LKEVAIQPEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +R+++ + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRVVV------------NSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLH+T+I + LEVQIRT+EM IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSLHSTVIGPKGDP---LEVQIRTKEMHEIAEFGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT + ++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKT-AETTGTLEKELTWFRQILEWQNE---ASNAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY +H+EIGN + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNNTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IIEILT-----SKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQ 484
>gi|384160293|ref|YP_005542366.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|384169371|ref|YP_005550749.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
gi|328554381|gb|AEB24873.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|341828650|gb|AEK89901.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
Length = 734
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++ V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 TYLPEEQIAFVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R++F+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKIFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + NE+ + +RI+ VG + CY VLG++H W P
Sbjct: 244 HIYSIYRKMALQNKQFNEIYDLLAVRIL--------VGSIKD----CYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH+
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHW---- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
A G++ A ++SW I E+Q E + + EF++++
Sbjct: 345 --------AYKEGKAAN------EEATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWIKLAQTSQAKHKIRQFFKKQ 484
>gi|422933491|ref|ZP_16966411.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339891612|gb|EGQ80570.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 552
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 320/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G V+KL L +N +A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+++F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDIAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 243 RKMYQKGKDFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + +++ D +
Sbjct: 444 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKENVTKLGKDNL 487
>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
gi|149752776|gb|EDM62707.1| RelA/SpoT family protein [Dorea longicatena DSM 13814]
Length = 781
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 320/539 (59%), Gaps = 55/539 (10%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+ P RL++ L I P+ ++ ++ +A LA +AH Q+R+SGEP+IIHP+ VA IL
Sbjct: 42 EDPNRLYDMLIARIRKYHPSTDVSMIEKAYKLAVKAHGDQRRKSGEPYIIHPLWVAIILA 101
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LE+D E+IAAG+LHD VEDT T E I EFG V +V+G V+KLG+L ++
Sbjct: 102 DLEMDKETIAAGMLHDVVEDTKF-TEEDIRREFGDEVALLVDG---VTKLGRLSYSSDKL 157
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQKEKAKETMDIYAPI 214
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK+EL++L+ Y+ E + + ++ E E+ +E+ + E
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVFYDLVNQINARKTEREEFVEQIVE------EVSTH 268
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ +K E+ K +SIYK ++ +++++ + +RII++ +
Sbjct: 269 MKNANIKAEVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVE------------SVK 316
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ + + E+QIRTEEM
Sbjct: 317 DCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEEMH 373
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + S GK A ++SWL I EWQ +
Sbjct: 374 KTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSWLRQILEWQRDM 417
Query: 544 VGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
N REF++ I DL V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV A
Sbjct: 418 SDN---REFLNLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGA 474
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++ +++
Sbjct: 475 RVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKNKINQWFKKE 528
>gi|315282436|ref|ZP_07870851.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
gi|313613919|gb|EFR87648.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
Length = 738
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
++I+T SK ++ + WL+ +T AR+KI +F + QA
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQA 485
>gi|16803563|ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
gi|47097020|ref|ZP_00234593.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|254828243|ref|ZP_05232930.1| relA [Listeria monocytogenes FSL N3-165]
gi|254912197|ref|ZP_05262209.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|254936525|ref|ZP_05268222.1| relA [Listeria monocytogenes F6900]
gi|284801913|ref|YP_003413778.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284995055|ref|YP_003416823.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|386043834|ref|YP_005962639.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|386047175|ref|YP_005965507.1| relA [Listeria monocytogenes J0161]
gi|386050499|ref|YP_005968490.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|386053776|ref|YP_005971334.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404284015|ref|YP_006684912.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404410825|ref|YP_006696413.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|405758571|ref|YP_006687847.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|16410952|emb|CAC99601.1| relA [Listeria monocytogenes EGD-e]
gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|258600631|gb|EEW13956.1| relA [Listeria monocytogenes FSL N3-165]
gi|258609119|gb|EEW21727.1| relA [Listeria monocytogenes F6900]
gi|284057475|gb|ADB68416.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284060522|gb|ADB71461.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|293590170|gb|EFF98504.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|345534166|gb|AEO03607.1| relA [Listeria monocytogenes J0161]
gi|345537068|gb|AEO06508.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|346424345|gb|AEO25870.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|346646427|gb|AEO39052.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404230651|emb|CBY52055.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|404233517|emb|CBY54920.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404236453|emb|CBY57855.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|441471216|emb|CCQ20971.1| GTP pyrophosphokinase [Listeria monocytogenes]
gi|441474345|emb|CCQ24099.1| GTP pyrophosphokinase [Listeria monocytogenes N53-1]
Length = 738
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 314/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|428772185|ref|YP_007163973.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium stanieri PCC 7202]
gi|428686464|gb|AFZ46324.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium stanieri PCC 7202]
Length = 747
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 296/517 (57%), Gaps = 53/517 (10%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
PN L+ +A A++ H+GQ R+SGE +IIHP+ VA +L +L D E IAAG LHD V
Sbjct: 30 DPNN-SLICKAFEYAYKLHEGQYRKSGEAYIIHPIAVAELLRDLGGDAEMIAAGFLHDVV 88
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
ED +T + IEE FG+ VR++VE TK+SK K E +A++ R+MFLAM
Sbjct: 89 EDNEDITPDHIEELFGSNVRQLVEAVTKLSKFN-FSNKTER------QAENFRRMFLAMA 141
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI+VKLADRLHNMRTL +P KQ IATET ++FAPLA LGM+Q K ELE+LSF
Sbjct: 142 QDIRVIVVKLADRLHNMRTLDFLPSEKQKLIATETKEIFAPLANRLGMWQFKWELEDLSF 201
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y ++++Y ++ +A+ + E + + I+ K + + E++ K Y
Sbjct: 202 KYLHSQEYGNIRSLIAERRSDREARINQVIDIITKGLHKSNINPI-----EVKGRPKHLY 256
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
IY+ + + + +++ IA LR+I+ K Q CY L +VH + PIP
Sbjct: 257 GIYEKMQRQKKEFDQIFDIAALRVIVNTK------------QECYQALAVVHDAFRPIPG 304
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+ +
Sbjct: 305 RFKDYIGLPKPNLYQSLHTTVVSL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK---- 357
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G + N +N + +WL + +WQ++ + E+VD + +L
Sbjct: 358 ------------EAGNSQNANLSNDEQKFTWLRQLLDWQKDL---KDAEEYVDNLKENLF 402
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
V+VFTP+G + +L +GAT VD+AY IHTE+GN M AKVNG + H+L N ++VE
Sbjct: 403 DDDVYVFTPQGALISLNRGATPVDFAYRIHTEVGNHMKGAKVNGRWLPMDHILQNGDIVE 462
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
IIT N WL KT SAR++I ++ +
Sbjct: 463 IITANNAHPSL------DWLNFVKTPSARNRIRQWYK 493
>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
16/4]
Length = 767
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 318/546 (58%), Gaps = 71/546 (13%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+P+ L+++L + PN ++ ++ + ++A AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 31 NPDELYKELIERVRKYHPNTDISMIEKGYLIARNAHEGQCRKSGEPYIIHPLCVAIILAD 90
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT + T E I +EF V +V+G V+KLG+L N +
Sbjct: 91 LELDKETIVAGLLHDVVEDT-ICTKEEIAQEFSEEVAELVDG---VTKLGQL---NYDAD 143
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET++++APLA
Sbjct: 144 KVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMEIYAPLA 203
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
+ LG+ ++K EL++LS Y + Y + ++A L K + + + DD +
Sbjct: 204 QRLGISKVKIELDDLSLKYLEPDAYYDLVEKIA-LRKSQRTD-------YINSLVDDVRK 255
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+D ++ E+ K +SIYK ++ +I+++ + +RII+
Sbjct: 256 HIDAAEIQAEVYGRAKHFFSIYKKMVNQHKTIDQIYDLFAVRIIV------------DSI 303
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++TPIP KDYIA PKPN YQSLHTT+I PF E+QI
Sbjct: 304 KDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGAPF--------EIQI 355
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT +M +E GIAAH+ + S G +V ++SWL I
Sbjct: 356 RTYDMHRTSEYGIAAHWKYK--------------ESGEGSSVVGEEE----KLSWLREIL 397
Query: 538 EWQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ+E N +EF + D L VF FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 398 EWQQEISDN---KEFSSLLKSDLNLFSDTVFCFTPSGDVKNLPNGSTPIDFAYSIHSAVG 454
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
N+M+ AKVNG LV +V+ N + +EI+T + S + WL K+ A++KI +
Sbjct: 455 NRMIGAKVNGKLVPIDYVIQNGDRIEIVTSQNTNGPS-----RDWLSIVKSSQAKNKINQ 509
Query: 656 FLREQA 661
+ R Q+
Sbjct: 510 WFRTQS 515
>gi|384044791|ref|YP_005492808.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
gi|345442482|gb|AEN87499.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
Length = 732
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 317/525 (60%), Gaps = 56/525 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V++A A EAH Q R+SGEP+IIHP++VA IL +L++D +IAAG
Sbjct: 16 TKRYLSEEDVAFVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + +E+ F V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTEI-TLKDLEKAFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y R+ +L K+ E E+ ++ ++ + +D +++K EI
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLAEVIDEVREQ--VDEVSIKVEISGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + NE+ + +RII+ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT+I + LEVQIRT +M IAE GIAAH++
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTFDMHQIAEYGIAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKT +A+ +++W I E+Q + + EF++++
Sbjct: 347 K-----------------EGKTA--EHASFEEKLTWFREILEFQND---ANDAEEFMESL 384
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V++FTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L
Sbjct: 385 KVDLFSDMVYIFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 444
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+++EI+T SK ++ K WL+ A+T A++KI +F ++Q+
Sbjct: 445 GDIIEILT-----SKHSYGPSKDWLKLAQTSQAKNKIRQFFKKQS 484
>gi|168333633|ref|ZP_02691893.1| (p)ppGpp synthetase I, SpoT/RelA [Epulopiscium sp. 'N.t. morphotype
B']
Length = 740
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 210/531 (39%), Positives = 317/531 (59%), Gaps = 64/531 (12%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y ++L ++ +A +A AH+GQ R+SGEP+IIHP+ VA+IL +LELD ESI AGLLH
Sbjct: 14 AYHPSDDLSMIEKAYDIASNAHNGQLRKSGEPYIIHPLGVAKILADLELDIESITAGLLH 73
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ--DVKADDLRQM 256
D VEDT++ T E IE F V +V+G V+KL ++K + N VQ +++ ++ R+M
Sbjct: 74 DVVEDTSM-TLEDIELNFNKEVALLVDG---VTKLSQIKYHSTNKKVQKEELQVENYRKM 129
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RV+++KLADRLHNM+TL +M P KQ +IA ET+ ++AP+A LG+ ++K+EL
Sbjct: 130 FIAMAQDIRVVLIKLADRLHNMQTLKYMIPEKQQAIARETMDIYAPIANRLGICKLKAEL 189
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LS Y N+ Y + + +A K+ ++ +E N+I++ KI ++ LD + +K +
Sbjct: 190 EDLSLRYINSNMYYYLVKTIA---KKRQERVEITNQIVV-KIRNE--LDKLGIKANVEGR 243
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K +SIYK ++ +I+++ + +R I++ + CY VLG+ H I+
Sbjct: 244 PKHFFSIYKKLVNQNKTIDQIYDLFAVRAIVE------------DVKDCYGVLGVAHDIF 291
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIA 491
TPIP KDYIA PKPN YQSLHTTL +PF E+QIRT EM AE GIA
Sbjct: 292 TPIPGRFKDYIAMPKPNMYQSLHTTLMGPNGVPF--------ELQIRTMEMHRTAEYGIA 343
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + GK L +++WL I EWQ++ N E
Sbjct: 344 AHW-----------------KYKEGKIEGLFQDTSEEKLAWLRQILEWQKDMSDN---EE 383
Query: 552 FVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
F+ I DL +V+VF+P+G++ +P GAT +D+AY IH++IGNKM AKVN +V+
Sbjct: 384 FISAIKVDLDIYTDQVYVFSPKGDLITIPTGATPIDFAYYIHSDIGNKMTGAKVNDKIVN 443
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N + +EI+T S S + WL T AR+KI ++ R+Q
Sbjct: 444 LDSTLKNGDRIEILT-----SASKKGPSRDWLNIVTTTQARNKINQWFRKQ 489
>gi|422809604|ref|ZP_16858015.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
gi|378753218|gb|EHY63803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
Length = 738
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 314/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|336400155|ref|ZP_08580943.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
gi|336163352|gb|EGN66284.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
Length = 574
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 320/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G V+KL L +N +A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDG---VTKLKALPNGTKN------QAENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+++F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDIAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 243 RKMYQKGKEFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + +++ D +
Sbjct: 444 -----SKNSKGPSIDWLDVVVTHGAKGKIRKFLKDENKENVTKLGKDNL 487
>gi|237743935|ref|ZP_04574416.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 7_1]
gi|289765417|ref|ZP_06524795.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
gi|336419052|ref|ZP_08599319.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
gi|423138132|ref|ZP_17125775.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229432966|gb|EEO43178.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 7_1]
gi|289716972|gb|EFD80984.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
gi|336164057|gb|EGN66969.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
gi|371958694|gb|EHO76403.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 724
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 319/529 (60%), Gaps = 60/529 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ + ++ AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++D ++I AGLLHD VEDT
Sbjct: 19 DFDKIKLALGFAEESHQGQYRKSGDDYIVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ I+ FG TV +V+G TK+ L KN+ A+++R+M LAM E +
Sbjct: 79 -LIPIADIKYNFGDTVATLVDGVTKLKALPN-GTKNQ--------AENIRKMILAMAENI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL M P KQ SI+ ETL ++APLA LGM ++KSELE+++F Y
Sbjct: 129 RVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKVKSELEDIAFSYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ +++ ++KR V + +E + +E + +++ + + + +K E++ K YSIY
Sbjct: 189 HHDEFLEIKRLVDNTKEERKDYIENFIRTMIRTLSE------LGIKAEVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + +++ + +R+I++ K CYHVLG+VH +TP+P K
Sbjct: 243 RKMYQKGKDFDDIYDLMGVRVIVEDKAT------------CYHVLGIVHSQYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE GIAAH++
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAEEGIAAHWN--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ N +S + + WL I E+Q E + ++ +F++ +T D+
Sbjct: 339 --YKENKKSSKDDNIY----------GWLRHIIEFQNE---SDSTEDFIEGVTGDIDRGT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF F+P+G+I LP GAT +D+A+M+HT++G K V AKVNG +V+ H L + + VEIIT
Sbjct: 384 VFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ WL+ T A+ KI KFL+++ + +++ D +
Sbjct: 444 -----SKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKENVTKLGKDNL 487
>gi|357038708|ref|ZP_09100505.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359500|gb|EHG07262.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
Length = 725
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 310/530 (58%), Gaps = 58/530 (10%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED+ + +P+ +L+L++RA A EAH GQKR SGEP+I HPV + IL +LE+D +
Sbjct: 4 EDIIQKVILYNPDADLQLLKRAFAFANEAHAGQKRNSGEPYITHPVAITTILTDLEMDMD 63
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AGLLHDTVEDT T E IE+ FG V ++V+G TK+S+L E S ++ +
Sbjct: 64 TLVAGLLHDTVEDTGT-TLEDIEKYFGREVAQLVDGVTKLSRL-------EYRSKEERQV 115
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MFLAM ++RV+++KLADRLHNMRTL + HKQ IA ETL++FAPLA LG+Y
Sbjct: 116 ENLRKMFLAMARDIRVVLIKLADRLHNMRTLQYHLEHKQREIALETLEIFAPLAHRLGIY 175
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
++K ELE+L+ ++N E Y ++ VA ++ E+ + +L KK+ + + +
Sbjct: 176 RLKWELEDLALRFSNPEKYYELADLVARTREKREEYIRSIISVLHKKMME------VKIN 229
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI+ K YSIY + K + N++ + +R+ L + CY VLG
Sbjct: 230 AEIQGRPKNLYSIYMKMQKQQLEFNQIYDVMAVRV------------LVDSVRDCYAVLG 277
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
VH +W PIP KDYIA PK N YQSLHTT++ + LE+QIRT EM +E GI
Sbjct: 278 TVHTLWVPIPGRFKDYIAMPKSNMYQSLHTTVVSPQGDP---LEIQIRTWEMHRTSEYGI 334
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+ R K + + ++SWL I +WQ++ +R
Sbjct: 335 AAHW--------------------RYKEGGGKDGDFDRKLSWLRQILDWQKDL---KDAR 371
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF++++ DL VFVFTP+G++ P G+T +D+AY +HT++G+ V AKVN +V
Sbjct: 372 EFMESLKIDLFADVVFVFTPKGDVMEFPAGSTPLDFAYRVHTQVGHNCVGAKVNNKIVPL 431
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N + VE++T SK + + WL+ KT A+ KI ++ +++
Sbjct: 432 DYTLKNGDRVEVLT-----SKQSHGPSRDWLKIVKTSQAKTKIRQWFKKE 476
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 298/509 (58%), Gaps = 47/509 (9%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ELV++A A EAH QKR SGEP+IIHP+ VA IL EL +D +I AGLLHD +EDT
Sbjct: 17 DIELVKKAYNFAKEAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ +FE F V +V+G TK++KLG+++ K + ++ +AD++R+M LAM +++
Sbjct: 77 DC-SFEDASRMFNPEVANLVDGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP +KQ + A ETL ++APLA LGM +IK ELE+L F Y
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPANKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y + + +A+ E E +++ L KK+E + ++I K YSIY
Sbjct: 192 HEKEYYDLVKDIAEKRVERESYIQDIVNDLYKKLEG------AGIDSDIDGRPKHFYSIY 245
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI E+ + +R+ L + + CY VLG+VH I+ PIP K
Sbjct: 246 KKMVNKNKSIEEIFDLTAIRV------------LVNSVKDCYGVLGIVHTIYRPIPGRFK 293
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ + T
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYKEGDTA-- 348
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G T +++WL + EWQ+E + EF++ DL
Sbjct: 349 -----------GGTEVDKQKEFEKKLAWLRDMLEWQKE---TSDAEEFMEGFKIDLFSDE 394
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT++GNK V AKVNG +V + L E+VEI+T
Sbjct: 395 VFVFTPKGVVINLCSKATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEILT 454
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKI 653
S +A + WL AK+ ++ KI
Sbjct: 455 -----SPNAKGPNMDWLNIAKSNQSKSKI 478
>gi|222100829|ref|YP_002535397.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
gi|221573219|gb|ACM24031.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
Length = 714
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 316/556 (56%), Gaps = 57/556 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
S E L+ +A A+ H+GQKR SG+PFI HPVEVA+IL EL +D ++AA LLHDT
Sbjct: 26 FSREEKRLLMKAYEFAWIVHEGQKRFSGDPFISHPVEVAKILAELGVDSTTLAAALLHDT 85
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
+ED V+ ++I+E FG + RIV+G TKVS + +++ + + +++MFLAM
Sbjct: 86 IEDGEGVSLDQIKELFGNEIARIVDGVTKVSSINAPVGPDQDSR---KRMETIQKMFLAM 142
Query: 261 TEEVRVIIVKLADRLHNMRTLSHM-PPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ P K+ A ETL+V+APLA LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIQYVQDPEKKKYKAYETLEVYAPLAHKLGIYSIKSELEDL 202
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y ++K VA+ KE EK E IL +E+ + +K + K
Sbjct: 203 AFKVLYPEEYYRIKELVAEKKKEREKRTNEYISILKSALEEHR------IKATVEGRYKH 256
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + E+ + LR+++K CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMKEKGKKFEEIYDLIALRVVVKDVTT------------CYTVLGIVHNIWKPL 304
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHTT+I E LE+QIR EEM AE G+ AH+
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ +P+ ++ + W+ + +W++E T EF D I ++
Sbjct: 357 ----IYKEKPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKGAT +D+AY IHTE+G+ AKVNG +V + L N +V
Sbjct: 395 LQMDEVFVFTPKGDIIHLPKGATPIDFAYAIHTEVGHHYSGAKVNGKIVPIDYQLKNGDV 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEII S S WL++A+T +AR KI +FL+E+ A E +T+
Sbjct: 455 VEIIVNKNSSGPSV-----DWLKYARTHNARAKIRRFLKEKLAPELVEKGKETLRRICRK 509
Query: 680 SGEESEVEDLSDGSKQ 695
G+ E SDG K+
Sbjct: 510 LGKSFEEVMQSDGIKR 525
>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
Length = 733
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 213/521 (40%), Positives = 307/521 (58%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ ++L+ +R+A A AH Q R+SGEP+IIHPV+VA IL LELD E+IA+G LHD
Sbjct: 19 YLNEDDLQFIRKAHEYAAWAHRDQYRKSGEPYIIHPVQVAGILVNLELDAETIASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT V T E ++ F V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 TVEDTGV-TVEDLKVTFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKMFVA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 131 MAKDLRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E E ++ +I + LD + ++ ++ K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRNEREHYVDEVINQIRGE--LDNVNIEADLDGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +RI L + + CY VLG++H W P+
Sbjct: 245 LYSIYKKMVLQSKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT+I + LEVQIRT +M IAE GIAAH+
Sbjct: 293 PGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ G T ++SW I EWQ E + EF++++ D
Sbjct: 345 -------AYKEGKQS-GSTQSFEE-----KLSWFREIMEWQSE---THDAEEFMESLKMD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTPRG++ LP G+ +D+AY IHTEIGN+ + AKVN + +VL ++
Sbjct: 389 LFSDMVYVFTPRGDVIELPYGSNPLDFAYRIHTEIGNQTIGAKVNSKMEPLDYVLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T SK ++ + W+ A+T A++KI +F ++Q
Sbjct: 449 VEVMT-----SKHSYGPSEDWVNIAQTSQAKNKIKQFFKKQ 484
>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
Length = 761
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 319/538 (59%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++ L I + P +++ ++ +A LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25 SPESLYKKLVDIILHYHPSDDITMISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT ++FE + + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-AISFEELSDIFGVDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A ++ ++ ++E ++KK ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKF--NEHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K +I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG H I+ PIP KDYIA PKPN YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTFEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + +G + +++WL I EWQ++
Sbjct: 357 TAEFGIAAHWKYKESGSGTSAQGSEDA-----------------KMNWLRQILEWQKDTS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + L + + VEIIT S+++ + WL K+ A+ KI ++ + +
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQAKSKIQQWFKTE 509
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 323/538 (60%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++ L I + P +++ ++ +A LA AH+ Q+R+SGEP+IIHP+ VA IL E
Sbjct: 25 SPESLYKKLVNIILHYHPSDDISMITKAYELAKTAHNDQRRKSGEPYIIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT ++FE + + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-AISFEELSDMFGVDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A ++ ++ ++E ++KKI ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKI--NEHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ +K +I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SVTGIKYQINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG VH I+ PIP KDYIA PK N YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTVHEIYKPIPGRFKDYIAMPKQNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + TG A+ + + +++WL I EWQ++
Sbjct: 357 TAEFGIAAHWKYK--ETGSSSEAQGSEDA---------------KMNWLRQILEWQKDTS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ L + + VEIIT S+++ + WL K+ A+ KI+++ + +
Sbjct: 457 VNGRLVNIDFELTSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQAKSKILQWFKSE 509
>gi|404497180|ref|YP_006721286.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|418066658|ref|ZP_12704018.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
gi|78194783|gb|ABB32550.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|373560151|gb|EHP86423.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
Length = 716
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 214/533 (40%), Positives = 310/533 (58%), Gaps = 60/533 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L+LVR+A + + H GQ R SGEP+++HP+EVA +L +L LD
Sbjct: 3 RLNDILDKVGSYNPAPDLDLVRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGLLADLRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ GLLHDT+EDT + T E +E FGA V +V+G TK+SK+ K K E+
Sbjct: 63 VPTVVTGLLHDTIEDT-LTTREELEGLFGAEVANLVDGVTKISKI-HFKTKEES------ 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI+VKLADRLHNMRTL + P KQ SIA ETL ++AP+A LG
Sbjct: 115 QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIARETLDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK-IEDDQFLDLM 367
+ IKSELE+LSF Y + Y + +V KE E ++E KI++ K +E D
Sbjct: 175 ISWIKSELEDLSFRYLEPQIYYDLASKVTKKKKERESYVDEVRKIIVDKLVEHD------ 228
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E+ K YSI++ + I+++ + +R+++ + + CY
Sbjct: 229 -IKGEVFGRSKHLYSIWRKMQSRSVDIDQIYDLIAIRVMV------------NDIRECYE 275
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLGL+H W PIP KDYIA PK N YQSLHTT+I E R+EVQIRT +M +AE
Sbjct: 276 VLGLIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGE---RMEVQIRTYDMHGVAE 332
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + G+ K V R +WL + EWQ+E
Sbjct: 333 AGIAAHWKYK------------EGKGYDEKEVK--------RFAWLRQLLEWQQEL---Q 369
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
S EF+ T+ +L V+VFTP G++K+ PKG+T +D+AY IHT++G++ V AKVNG L
Sbjct: 370 DSHEFMSTVKVELFPEEVYVFTPNGDVKSFPKGSTPIDFAYTIHTDLGHRCVGAKVNGKL 429
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V + L N ++VE+IT + K WL+ ++ AR+KI +++ +
Sbjct: 430 VPLKYELKNGDIVEVITSPHHTPS------KDWLKIVRSSRARNKIRAWIKTE 476
>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
Length = 731
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 323/548 (58%), Gaps = 61/548 (11%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE ++E ++ SY++ + V +A +A EAH Q R SGEP+IIHPV+VA IL EL
Sbjct: 8 APEDVFELVK---SYMNEEHVTFVVKAYEVAKEAHKEQFRSSGEPYIIHPVQVAGILAEL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D E++AAG LHD VEDT V T E + EF V ++V+G V+KLGK+K S
Sbjct: 65 QMDPETVAAGFLHDVVEDTEV-TREDLVNEFSEEVAKLVDG---VTKLGKIKY----MSK 116
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA
Sbjct: 117 EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISQETLEIFAPLAH 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ ++K ELE+ + Y N + Y R+ L K+ E E +M +I L
Sbjct: 177 RLGISKVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMDEINSQ--LK 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ ++ +I K YSIY+ ++ + NE+ + +RI L + C
Sbjct: 231 EVEIEADIFGRPKHLYSIYRKMVLQKKQFNEIYDLLAVRI------------LVDSIKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y V+G++H +W P+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM I
Sbjct: 279 YAVIGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + GKTV N I +++W I E+Q E
Sbjct: 336 AEFGIAAHWAYK-----------------EGKTVEQNAETIDQKLTWFREILEFQNE--- 375
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ + EF++++ DL V+VF+P+G++ LP G+ +D+AY +H+E+GNK + AKVNG
Sbjct: 376 SSNAAEFMESLKFDLFSDMVYVFSPKGDVIELPSGSVPIDFAYRVHSEVGNKTIGAKVNG 435
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF----LREQA 661
+V L ++VE++T SK +F + W++ A++ A++KI +F +RE++
Sbjct: 436 KMVPLDTPLKTGDIVEVLT-----SKQSFGPSRDWIKIAQSSQAKNKIKQFFKKHVREES 490
Query: 662 ALSASEIT 669
+ E+
Sbjct: 491 VVKGKELV 498
>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
Length = 717
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 303/532 (56%), Gaps = 58/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SY +L L+R+A + + H GQ R SGEP+IIHP+EVA +L EL LD
Sbjct: 3 RLNDILDKVASYNPTADLNLIRKAYVYCAKVHQGQTRLSGEPYIIHPMEVAGLLAELRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
S+ G LHDT+EDT + T E + FG V +V+G TK+SK+ K K E+
Sbjct: 63 VASVITGFLHDTIEDT-LTTAEELTSLFGDEVATLVDGVTKISKI-HFKTKAES------ 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM+ ++RVI+VKLADRLHNMRTL P KQ SIA ET+ ++AP+A LG
Sbjct: 115 QAENFRKMLLAMSIDIRVILVKLADRLHNMRTLEFQPELKQRSIAQETMDIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK ELE+LSF Y N E Y + R+++ +E E + EA ++ K L
Sbjct: 175 ISWIKVELEDLSFRYLNPEIYFDLARKISLKKREREAYVSEAKTVIADK------LGQHG 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K E+ K YSIY+ +L ++E+ + LRI L + CY V
Sbjct: 229 IKGEVSGRSKHLYSIYRKMLARNVELDEIYDLIALRI------------LVDDVRDCYEV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H W PIP KDYIA PK N YQSLHTT+I + R+EVQIRT EM +A+
Sbjct: 277 LGVIHSAWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGD---RMEVQIRTHEMHNVADA 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G R R SWL + EWQ+E
Sbjct: 334 GIAAHWK----------YKEGKGYDERD----------VKRFSWLRQLLEWQQEL---QD 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREF+D++ +L V+VFTP+G++K P+G+T +D+AY +H+++G++ V AKVNG LV
Sbjct: 371 SREFMDSVKVELFPEEVYVFTPQGDVKPFPRGSTPIDFAYAVHSDVGHRCVGAKVNGKLV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VE+IT + K WL+ K+ AR++I +++ +
Sbjct: 431 PLKYELKNGDIVEVITSPHHTPS------KDWLKIVKSSRARNRIRAWIKTE 476
>gi|347548906|ref|YP_004855234.1| putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346981977|emb|CBW85962.1| Putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 738
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 314/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLNDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
Length = 734
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 307/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ ++L +RRA A +AH Q R+SGEP+IIHP++VA IL LE+D E++A G LH
Sbjct: 18 QYLNESDLAFIRRAYEFAEKAHSNQFRKSGEPYIIHPIQVAGILVNLEMDPETVAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T E I + F V +V+G V+KLGK+K K S + +A++ R+MF+
Sbjct: 78 DVVEDTDI-TLEEIGDAFNTEVAMLVDG---VTKLGKIKYK----SKEAQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ IK ELE+
Sbjct: 130 AMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ L K+ E E + ++ +I+ LD + ++ ++ K
Sbjct: 190 TALRYLNPQQYY----RIVHLMKQKRNEREHYIEEVINEIQTQ--LDDVNIQADLNGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI ++ + CY VLG++H W P
Sbjct: 244 HLYSIYRKMVLQNKQFNEIYDLLAVRITVESI------------KDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT +M IAE GIAAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNLYQSLHTTVIGPKGDP---LEVQIRTHDMHEIAEYGIAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK + +++W I EWQ E + EF++++
Sbjct: 348 ----------------EGKQSAAEQS-FEEKLTWFREILEWQNE---THDAEEFMESLKV 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ VD+AY IHTE+GN+ + AKVNG + + L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPVDFAYRIHTEVGNQTIGAKVNGKMEPLDYELKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V+++T SK A+ K W++ A+T A++KI +F ++Q
Sbjct: 448 IVDVMT-----SKHAYGPSKDWIKLAQTSQAKNKIKQFFKKQ 484
>gi|422416024|ref|ZP_16492981.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|423100605|ref|ZP_17088312.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
gi|313623673|gb|EFR93827.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|370792829|gb|EHN60672.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
Length = 738
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 313/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|16800626|ref|NP_470894.1| hypothetical protein lin1558 [Listeria innocua Clip11262]
gi|422413014|ref|ZP_16489973.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
gi|16414045|emb|CAC96789.1| relA [Listeria innocua Clip11262]
gi|313618809|gb|EFR90701.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
Length = 738
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 313/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGEEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|404413602|ref|YP_006699189.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
gi|404239301|emb|CBY60702.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
Length = 738
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 313/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV+ A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKNAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991813|gb|EEC57817.1| RelA/SpoT family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 776
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 324/543 (59%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SP+ L+ L TI P+ ++ + +A +A +AH+GQ R+SGEP+IIHP+ VA IL E
Sbjct: 41 SPDVLYAQLVDTIKKYHPSTDMSQIEKAYKIATKAHEGQFRKSGEPYIIHPICVAIILAE 100
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD ESI AGLLHD VEDT V+T + I EFGA V +V+G TK+++L N H
Sbjct: 101 LELDKESIIAGLLHDVVEDT-VMTTDDITREFGAEVALLVDGVTKLTQL------NYEHD 153
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+++A++LR+MFLAM +++RVI++KLADRLHNMRT+ + P KQ + ET++++AP+A
Sbjct: 154 KIEIQAENLRKMFLAMAKDIRVIMIKLADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIA 213
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +++ ++ KE+ E K ++K+++ +
Sbjct: 214 HRLGISKIKVELDDLSMQYLMPDVYNDLVKQI-NMNKENR---EAFIKSIIKEVK--MHI 267
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++ EI K +SIY+ ++ +++++ + +RI ++ +
Sbjct: 268 ENAGIEAEIDGRVKHFFSIYRKMVNQNKTLDQIYDLFAVRIKVE------------TVKD 315
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 316 CYAALGVIHEMYKPIPGRFKDYIAMPKENMYQSLHTTLIASNGRPF--------EIQIRT 367
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + GKT N N ++SWL I EW
Sbjct: 368 YEMHRTAEYGIAAHW-----------------KYKEGKTGETGNQNEEAKLSWLRQILEW 410
Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N +EF+ +I D L V+ FTP G++KNLP G+T +D+AY IHT +GNK
Sbjct: 411 QRDMSDN---KEFLSSIKNDLNLFSDSVYCFTPTGDVKNLPTGSTPIDFAYSIHTAVGNK 467
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EIIT S+++ + WL+ K+ AR+KI ++
Sbjct: 468 MVGARVNGKLVTIDYQIKNGDRIEIIT-----SQNSKGPSRDWLKIVKSTQARNKINQWF 522
Query: 658 REQ 660
+++
Sbjct: 523 KQE 525
>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
Length = 721
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/523 (39%), Positives = 314/523 (60%), Gaps = 60/523 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ +V++A A +AH+G+ RRSGEP+I HPVEVA IL E++LD E++AA LLHD VEDT
Sbjct: 13 DISVVKQAHDFARDAHEGKFRRSGEPYISHPVEVAIILAEMQLDQETLAAALLHDVVEDT 72
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE-NHSV--QDVKADDLRQMFLAMT 261
+ T E + FG + R+V+G V+KLG+++ E +H+V ++ +A+ LR+MFLAM
Sbjct: 73 DT-TMEDLRTLFGDRIVRLVDG---VTKLGRIRWAAETDHAVREKERQAESLRKMFLAMV 128
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
++VRV+++KLADRLHNMRTL HMP KQ A ET++++APLA LG++QIKSELE+L+
Sbjct: 129 DDVRVVLIKLADRLHNMRTLEHMPRAKQLRSAKETMEIYAPLANRLGIWQIKSELEDLAL 188
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + + Y ++R + + ++ LE L + +ED + EI K
Sbjct: 189 RYVDPQTYFTIERALERRGTDRDQYLESVIAELSRTLED------AGIGAEISGREKHIT 242
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SI + + + S +E+ + +R+I+ K + CY LG++H IW PIP
Sbjct: 243 SIARKMERKERSFDEIYDVLGIRVIVDEK------------KDCYGALGVIHSIWHPIPG 290
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
DY+ATPK + YQS+HT + L + LE+QIRT EM IAE GIAAH+ +
Sbjct: 291 EFDDYVATPKESMYQSIHTVV---LGPNGHPLEIQIRTHEMHYIAEYGIAAHWRYK---- 343
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G P +AN+ +I+WL + +W++E V ++EFV+++ D+
Sbjct: 344 --------EGSRP--------DANVEAKIAWLRQVMDWRDEVVD---AQEFVESLKSDVF 384
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
++VFTPRG+I LP GAT VD+AY IHTE+G++ V AKVN +LV + L N +VV+
Sbjct: 385 QEMIYVFTPRGDIIELPAGATPVDFAYRIHTEVGHQCVGAKVNNHLVPLNYKLQNGQVVQ 444
Query: 622 IITYNALSSKSAFQRHKQWL----EHAKTRSARHKIMKFLREQ 660
I+T SK+ + WL + T SAR K+ ++ R Q
Sbjct: 445 IMT-----SKTKVGPSRDWLMSSSGYITTASAREKVRQWFRRQ 482
>gi|365157987|ref|ZP_09354230.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
gi|363622166|gb|EHL73337.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
Length = 730
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 314/522 (60%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
YL+ + LV +A +A EAH Q R+SGEP+I+HPV+VA IL +LE+D ++AAG LH
Sbjct: 18 QYLNEEHVALVYKAYRVAEEAHKHQYRKSGEPYIMHPVQVAGILADLEMDPATVAAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E ++ EF + +V+G V+KLGK+K K S ++ +A++ R+MFL
Sbjct: 78 DVVEDTEM-TLEDLKREFNEEIAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y R+ +L K K E + E + L ++++ EI K
Sbjct: 190 TALRYLNPQQYY----RIVNLMK--RKRAEREEYLEEVVEEVRERLKEVSIEAEISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVIKNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT +M IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFDMHRIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKT+ N++ ++SW I E+Q+E + + EF++++
Sbjct: 348 ----------------EGKTLD-ENSSFEKKLSWFREILEFQKE---SANAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L +
Sbjct: 388 DLFSDMVFVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYKLKTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A++KI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWIKLAQTSQAKNKIKQFYKKQ 484
>gi|116872952|ref|YP_849733.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741830|emb|CAK20954.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 738
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 318/546 (58%), Gaps = 55/546 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++H Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE F + V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEAFDSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFADVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V +
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQ 503
Query: 680 SGEESE 685
G E++
Sbjct: 504 LGFETK 509
>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
Length = 733
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 314/521 (60%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y S ++ +V +A + A+E H Q R+SGE +IIHPVEVA+IL ELE+D ++IAAGLLHD
Sbjct: 12 YNSGADVSIVEKAYLHAYEGHKNQYRKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHD 71
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT++ T+E + EFG T+ +V+G V+KLG++K S Q+++A++ R+MF A
Sbjct: 72 VLEDTDM-TYEEMASEFGTTIADLVDG---VTKLGQIKY----QSKQEMQAENFRKMFFA 123
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRT+ +MP K + ET +++AP+A LG+++IK E+E+L
Sbjct: 124 MGKDIRVVLIKLADRLHNMRTMKYMPKEKAIEKSKETAEIYAPIANRLGIFRIKWEMEDL 183
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y + + Y ++ +V+ +E EK +E + + K+E++ + +I+ K
Sbjct: 184 ALRYLDPDGYRELTEKVSLKRQEREKYIESVIEQIEVKLEEND------ITCDIKGRAKH 237
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + + E+ + +RII+ + CY +GLVH IW PI
Sbjct: 238 FYSIYKKMKYQDKTFEEIYDLMAVRIIV------------DNIKDCYGAVGLVHTIWKPI 285
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PKPN YQSLHTT++ E LE+QIRT +M+ IAE GIAAH+ +
Sbjct: 286 PTRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTWDMNRIAEFGIAAHWKYKER 342
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ NG S + + ++SW+ + EWQ+E EF++++ D
Sbjct: 343 FSA-------NGNS---------DGEMEKKLSWIRQMMEWQKEV---SDPEEFMESLKID 383
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L ++VFVF+PRG++ LP G+ +D+AY +H++IGNK V AKVN +V + L ++
Sbjct: 384 LFANKVFVFSPRGDVLELPAGSCPLDFAYKVHSQIGNKCVGAKVNSRMVPIDYKLKTGDI 443
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT + S + WL K+ A+ KI ++ +++
Sbjct: 444 VEIITSGNSNGPS-----RDWLNIVKSSGAKTKIRQWFKKE 479
>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 723
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 313/521 (60%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S +EL++VR+A + A +AH+GQ R SG+P+I HP+ VA IL +L +D ++A LLHD
Sbjct: 13 YMSDDELDMVRKAYLFAEKAHEGQLRASGDPYITHPLAVAGILADLHMDHVILSAALLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+ T +++ +EFG V +V+G V+KL ++K K++ ++ +A++ R+M LA
Sbjct: 73 VVEDTHA-TLDQVRQEFGVEVAELVDG---VTKLRRIKYKSQ----EEQQAENHRKMLLA 124
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M ++VRVI++KLADRLHNMRTL + Q IA ETL++FAP+A LG+ IK ELE++
Sbjct: 125 MAKDVRVILIKLADRLHNMRTLKYRSEEDQRRIANETLEIFAPIAHRLGISTIKWELEDI 184
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E EK +E+ + + K+ED + +K +I K
Sbjct: 185 SLRYINPQQYYRIVHLMKKKRAEREKYIEKVMEEIRVKLED------LGIKCDISGRPKH 238
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + NE+ + +RII++ + CY VLG+VH +W P+
Sbjct: 239 IYSIYRKMFLQHKEFNEIYDLLAIRIIVE------------NVRDCYAVLGVVHTLWKPM 286
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I E LEVQIRT+EM AE GIAAH++ +
Sbjct: 287 PGRFKDYIAMPKANLYQSLHTTVIGPEGEP---LEVQIRTQEMHRTAEYGIAAHWAYK-- 341
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + N+ R+SW + E+Q+E + ++EFV+++ D
Sbjct: 342 ---------------EGKRLKGNDKYGEQRLSWFRELLEYQQE---SRDAQEFVESLKMD 383
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LP G+ +D+AY IHTEIGN+ V AKVNG +V H L ++
Sbjct: 384 LFSDLVFVFTPKGDVIELPAGSVPLDFAYRIHTEIGNRCVGAKVNGKIVPLDHPLKTGDI 443
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ AK+ A++KI + +++
Sbjct: 444 VEILT-----SKHSYGPSQDWLKIAKSSHAKNKIRAWFKKE 479
>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
Length = 761
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 318/538 (59%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++ L I + P +++ ++ +A LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25 SPESLYKKLVDIILHYHPSDDITMISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT ++FE + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-AISFEELSNIFGVDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A ++ ++ ++E ++KK ++ L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKF--NEHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K +I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVAA------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG H I+ PIP KDYIA PKPN YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTFEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + +G + +++WL I EWQ++
Sbjct: 357 TAEFGIAAHWKYKESGSGTSAQGSEDA-----------------KMNWLRQILEWQKDTS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDSVYCFTPNGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + L + + VEIIT S+++ + WL K+ A+ KI ++ + +
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQAKSKIQQWFKTE 509
>gi|294501369|ref|YP_003565069.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|295706716|ref|YP_003599791.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
gi|294351306|gb|ADE71635.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|294804375|gb|ADF41441.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
Length = 732
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 317/525 (60%), Gaps = 56/525 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++A A EAH Q R+SGEP+IIHP++VA IL +L++D +IAAG
Sbjct: 16 TKRYLNEEDVAFVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + +E+ F V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTEI-TLKDLEKAFNEEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK EL
Sbjct: 128 FVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + Y N + Y R+ +L K+ E E+ ++ ++ + +D +++K EI
Sbjct: 188 EDTALRYLNPQQYY----RIVNLMKKKRAEREQYLAEVIDEVREQ--VDEVSIKVEISGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + NE+ + +RII+ + + CY VLG++H W
Sbjct: 242 PKHIYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT+I + LEVQIRT +M IAE GIAAH++
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDP---LEVQIRTFDMHQIAEYGIAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GKT +A+ +++W I E+Q + + EF++++
Sbjct: 347 K-----------------EGKTA--EHASFEEKLTWFREILEFQND---ANDAEEFMESL 384
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V++FTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ + L
Sbjct: 385 KVDLFSDMVYIFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDYRLKT 444
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+++EI+T SK ++ K WL+ A+T A++KI +F ++Q+
Sbjct: 445 GDIIEILT-----SKHSYGPSKDWLKLAQTSQAKNKIRQFFKKQS 484
>gi|336424063|ref|ZP_08604110.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336012840|gb|EGN42733.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 809
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/547 (37%), Positives = 321/547 (58%), Gaps = 64/547 (11%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL + P +++ ++ +A +A+ AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 62 SPEELYQDLISRVRRYHPSDDISMIEKAYKIAYAAHEGQVRKSGEPYIIHPLCVAIILAD 121
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG----KLKCKN 240
LELD E+I AGLLHD VEDT ++T IE+EFG V +V+G TK+ ++ K +N
Sbjct: 122 LELDKETIEAGLLHDVVEDT-IMTEAEIEKEFGPDVALLVDGVTKLQQIDFPSDKGNGEN 180
Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
+ Q+++A++LR+MFLAM +++RVI++KLADRLHNMRTL + PP KQ IA ET++++
Sbjct: 181 KTADQQEMQAENLRKMFLAMAKDIRVIMIKLADRLHNMRTLKYQPPAKQQKIARETMEIY 240
Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
AP+A+ LG+ +IK EL++LS Y E Y + ++A E E+ +++ E
Sbjct: 241 APIAQRLGISKIKVELDDLSLKYLEPEVYYDLVDKIAVRRSEREEYIQQIVD------EV 294
Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+ + +K++I K +SIYK + +++++ + +RII+
Sbjct: 295 SEHMKNAGIKSQIDGRVKHFFSIYKKMKNQSKTLDQIYDLFAVRIIV------------D 342
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEV 475
+ CY LG++H ++ PIP KDYIA PK N YQSLHTT+I PF E+
Sbjct: 343 SVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTVIGSSGQPF--------EI 394
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT EM AE GIAAH+ + + GK V +++WL
Sbjct: 395 QIRTMEMHKAAEFGIAAHWKYK--------------EASDGKKVAAQEEE---KLAWLRQ 437
Query: 536 IREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
I EWQ + N +EF++ + DL V+ FTP G++K LP G+T +D+AY +HT
Sbjct: 438 ILEWQRDMSDN---KEFMNLLKSDLDLFSDTVYCFTPTGDVKTLPAGSTPIDFAYSVHTA 494
Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
+GNKM+ A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI
Sbjct: 495 VGNKMIGARVNGKLVTIDYEIQNGDRIEILT-----SQNSKGPSRDWLNLVKSTQAKNKI 549
Query: 654 MKFLREQ 660
++ + +
Sbjct: 550 NQWFKNE 556
>gi|373468555|ref|ZP_09559802.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371766018|gb|EHO54298.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 762
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 314/538 (58%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L + L I + P +++ ++ +A LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25 SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT +T++ + + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-AITYDELADMFGVDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A KE ++ + ++KK Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLA-FRKEQRQQFVDD---IIKKFS--QHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SATGMKFTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG H I+ PIP KDYIA PKPN YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---DTGQPFEVQIRTVEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + +G V + +++WL I EWQ +
Sbjct: 357 TAEFGIAAHWKYKESGSGSVAKGAEDA-----------------KMNWLRQILEWQRDMS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDLDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + L + + VEIIT S+++ + WL K+ AR KI ++ + +
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQARSKIQQWFKNE 509
>gi|373494894|ref|ZP_09585491.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
gi|371967256|gb|EHO84728.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
Length = 733
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 309/518 (59%), Gaps = 65/518 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
E++ A +A + H+GQ R+SGEP+ IHP+ VA IL +L +D +I GLLHD VEDT
Sbjct: 21 EVIGAAFDMAHKLHEGQLRKSGEPYFIHPIAVAIILAQLGMDEATIVGGLLHDVVEDTEY 80
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E + +FG V +V+G V+KLG +K + ++ +A++LR+MF AM++++RV
Sbjct: 81 -TREMLVNDFGEEVAVLVDG---VTKLGSIKFDTK----EEAQAENLRKMFFAMSKDIRV 132
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
+I+KLADRLHNMRT + KQ + ETL ++APLA LG++ +K ELE+ + Y +
Sbjct: 133 LIIKLADRLHNMRTAEYWSESKQKEKSRETLDIYAPLASRLGIFTVKFELEDTALKYLHP 192
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
++Y +KR V++ ++ EK + ++++I + L+ + + +I K YSIYK
Sbjct: 193 QEYETLKREVSEKREQREKVINS----VIERISTN--LEQLNLHFDISGRSKHLYSIYKK 246
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ ++E+ + +R+I+ + CY VLGLVH +W PIPR KDY
Sbjct: 247 MVLQNKQLDEIFDLTAVRVIV------------DSVKDCYAVLGLVHTMWKPIPRRFKDY 294
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLHTT+I PF E+QIRT EM +AE GIAAH+
Sbjct: 295 IAMPKPNMYQSLHTTVIGDNGEPF--------EIQIRTFEMHKVAEYGIAAHW------- 339
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ GK+ N N L+++WL EWQ+E +EF++T+ DL
Sbjct: 340 ----------KYKEGKSDSKQN-NEDLKLAWLRQTLEWQQEL---NDPKEFMETLKMDLF 385
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
S+VFVFTP+GE+ +LP G+T +D+A+ IHT++G K V AKVNG +V+ H L N ++VE
Sbjct: 386 SSQVFVFTPKGEVIDLPAGSTPLDFAFKIHTDVGCKCVGAKVNGKMVTIDHQLNNGDIVE 445
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
I+T + S S WL+ AK+ +AR KI +FLR+
Sbjct: 446 IVTSSNSSGPSV-----DWLKIAKSSTARTKIRQFLRK 478
>gi|320547771|ref|ZP_08042055.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
gi|320447531|gb|EFW88290.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
Length = 740
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 327/545 (60%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT++ T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTDI-TLDEIEAEFGKDVRIIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + + ++
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTEEQGLYGDVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHLYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ +SW+ + E Q+ N + +FVD++
Sbjct: 346 KKGIKGKV-----------------DDQEQAVGMSWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +FL+ Q + + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFLKNQDKELSVNKGRELLVDY 501
Query: 677 VADSG 681
D G
Sbjct: 502 FQDQG 506
>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
Length = 786
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/547 (38%), Positives = 310/547 (56%), Gaps = 62/547 (11%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L+ I P ++ LV +A +A++AH GQ R+SGEP+IIHP+ VA IL E
Sbjct: 34 SPEELYDELKKEIKKYHPSDDTSLVDKAYRVAYDAHKGQARKSGEPYIIHPLCVAIILAE 93
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL----GKLKCKN 240
LELD E+IAAGLLHD +EDT ++T + + EFG V +V+G TK+ L K+
Sbjct: 94 LELDKETIAAGLLHDVLEDT-IMTMDEMRAEFGDDVAHLVDGVTKLKHLHLTDSTKDPKD 152
Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
+N +++A++LR+MFLAM +++RVI++KLADRLHNMRTL + Q IA ET ++
Sbjct: 153 KNADRLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQQRIARETQDIY 212
Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
P+A+ LG+ +IK ELE+L Y + Y + +VA E + ++ + K + D
Sbjct: 213 CPIAQRLGISKIKIELEDLCMKYLYPDAYYDLVEKVALRKTERDTYIQGLVNDVKKYVSD 272
Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+K EI K +SIYK ++ +I+++ + +RI++ P
Sbjct: 273 ------AGIKAEIYGRAKHFFSIYKKMVNQDKTIDQIYDLFAIRILVDTIPD-------- 318
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEV 475
CY VLG++H + PIP KDYIA PK N YQSLHTTLI PF E+
Sbjct: 319 ----CYAVLGIIHEKYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPSGQPF--------EI 366
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT EM AE GIAAH+ + ++SWL
Sbjct: 367 QIRTYEMHRTAEYGIAAHWK---------------YKETNNGNATTTTVTEEEKLSWLRQ 411
Query: 536 IREWQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
I EWQ++ N +EF+ + D L VF FTP G++KNLPKG+T +D+AY IH+
Sbjct: 412 ILEWQQDMSDN---KEFMTLLKSDLNLFSDNVFAFTPSGDVKNLPKGSTPIDFAYSIHSA 468
Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
+GNKMV AKVNG LV +V+ N + +EIIT S+++ + WL+ K+ A++KI
Sbjct: 469 VGNKMVGAKVNGKLVPIDYVIKNGDQIEIIT-----SQNSKGPSRDWLKVVKSTQAKNKI 523
Query: 654 MKFLREQ 660
++ R +
Sbjct: 524 NQWFRSE 530
>gi|429766249|ref|ZP_19298523.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
gi|429185229|gb|EKY26218.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
Length = 727
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 307/532 (57%), Gaps = 57/532 (10%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E L E +R + + +L +V++A LAFEAH QKR SGEP+IIHP+EVA IL EL +
Sbjct: 3 EVLLEKIRENCTNV---DLNIVKKAYNLAFEAHKEQKRESGEPYIIHPIEVATILAELGM 59
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D +I AGLLHD +EDT+ T+E I+ F + +V G TK++K+ E S ++
Sbjct: 60 DTSTIVAGLLHDVIEDTDY-TYEDIKNIFSEEIANLVSGVTKITKM-------EYKSKEE 111
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+AD+ R+M LAM ++RVII+KLADRLHNMRTL +M KQ A ETL ++APLA L
Sbjct: 112 QQADNFRKMLLAMANDIRVIIIKLADRLHNMRTLKYMSKEKQKKTAKETLDIYAPLAHRL 171
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ ++K ELE+L F Y + E+Y + +++A+ E E + + K L +K LD
Sbjct: 172 GISKVKWELEDLCFRYLHEEEYYDLVKQIAEKRVERETYIAKTIKDLYEK------LDEA 225
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ ++I K YSIY+ ++ SI ++ + +RI L + + CY
Sbjct: 226 GIDSDIDGRPKHFYSIYRKMVTKNKSIEQIFDLTAIRI------------LVNSVKDCYE 273
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG+VH I+ PIP KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE
Sbjct: 274 VLGVVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAE 330
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + G S K N ++ WL + EWQ+E
Sbjct: 331 YGIAAHWKYK------------EGDSGDNKEKSFEN-----KLVWLRDMLEWQKE---TS 370
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+ EF++ +L +F+FTP+G + +LP GAT +D+AY IHT++GNK V AKVNG +
Sbjct: 371 DAEEFMEGFKINLFTDEIFLFTPKGVVIDLPNGATPIDFAYRIHTDVGNKCVGAKVNGKI 430
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V + L ++VEI+T N +SK + WL AK+ A+ KI + ++
Sbjct: 431 VPLDYKLKTGQIVEILTSN--NSKGP---NMDWLSIAKSNQAKSKIRAWFKK 477
>gi|392988581|ref|YP_006487174.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
gi|392336001|gb|AFM70283.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
Length = 737
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 307/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P+ + V++A A AHDGQ R+SGEP+IIHP++VA IL +L +D ++A G LH
Sbjct: 18 QYMGPDHVAFVQKACDYATAAHDGQFRKSGEPYIIHPIQVAGILADLRMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTDV-TLDDLKEEFGPDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNATVEDIRLATEELDIYAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G I ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNDKVEPDG--------------ITKQLSWFHEIIELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AK+NG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKINGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEILT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
Length = 789
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 324/543 (59%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L ++ P+ ++ ++++A +A +AH QKR+SGEP+IIHP+ VA IL +
Sbjct: 54 SPEVLYQELITSVRKYHPSTDITMIQKAYEVASDAHKDQKRKSGEPYIIHPLCVAIILAD 113
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT + T E +E+EF A V +V+G V+KLG+L +
Sbjct: 114 LELDKETIVAGLLHDAVEDTWMTT-EEVEKEFSAEVALLVDG---VTKLGQLSYSADKVE 169
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 170 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 226
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +VA L K +E N I+ K+++ Q +
Sbjct: 227 MRLGISKIKVELDDLSLKYLKPDVYYDLVNKVA-LRKSERQEF--VNNIV-KQVK--QHM 280
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
D +K ++ K +SIYK ++ +I+++ + +RI L +
Sbjct: 281 DEAAIKAQVDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 328
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 329 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 380
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G+ P K +++WL I EW
Sbjct: 381 FEMHKTAEYGIAAHWKYK---------ESSDGKVPVDKRE-------EEKLNWLRQILEW 424
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP+G++KNLP G+T +D+AY +H+ +GN+
Sbjct: 425 QRDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKNLPNGSTPIDFAYSVHSAVGNR 481
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV + + N + +EIIT S+++ + WL+ K+ A++KI ++
Sbjct: 482 MVGARVNGKLVPIEYQIKNGDRIEIIT-----SQNSQGPSRDWLKLVKSTQAKNKINQWF 536
Query: 658 REQ 660
+++
Sbjct: 537 KKE 539
>gi|406910424|gb|EKD50451.1| hypothetical protein ACD_62C00541G0007 [uncultured bacterium]
Length = 715
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 305/514 (59%), Gaps = 62/514 (12%)
Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
+R+A A AH+GQKR+SGEPF+IHP+EVA+IL +L++D S+ A +LHDTVEDT +++
Sbjct: 23 IRKAYDFAASAHEGQKRKSGEPFLIHPLEVAKILTQLKMDISSLIAAILHDTVEDT-ILS 81
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
++ I+ FG V IV+G TK+SK+ K N+ +D +A++ R+M +AM++++RVI+
Sbjct: 82 YDDIKASFGVDVAEIVDGVTKISKI---KISNQ----EDRQAENYRKMIIAMSKDIRVIM 134
Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
VKLADR++NMRTL M +Q IA ETL ++AP+A +G+YQ K ELE LS + E
Sbjct: 135 VKLADRINNMRTLQFMSEARQVGIAQETLDIYAPIAGRMGIYQFKEELEELSLKFLKPEI 194
Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRSVCKEPYSIYKA 386
Y+++ K LE+ ++ M +++D L + + +I K PYS+Y+
Sbjct: 195 YSQLATTT--------KRLEKLRELYMARVKDALTNSLRVSIPQFDIFGRIKRPYSVYRK 246
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+L + +++V+ + R+++ S + CY VLG++H +W PI KDY
Sbjct: 247 MLAQQIELDDVHDLMAFRVMV------------SSIEQCYEVLGIIHSLWKPIQGRFKDY 294
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
IA PK N YQSLHTT++ F E R+E QIRT EM+ IA++GIAAH+
Sbjct: 295 IAMPKANSYQSLHTTVLCFDAE---RVEFQIRTHEMNEIADKGIAAHWK----------- 340
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ +GR L+ + A + WL + +WQ E ++ EFVDT DL +F
Sbjct: 341 YKDDGR--------LDTKDEA-KFRWLRHLMDWQSELKDSL---EFVDTFKLDLFEDEIF 388
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VFTP G+IKNLP AT VD+AY IH+ +G + A+VNG +VS H L + + +EIIT
Sbjct: 389 VFTPNGDIKNLPFNATPVDFAYSIHSNVGERCAGARVNGRIVSINHKLDSGDTIEIIT-- 446
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
K K WL+ + A+ KI F+R+Q
Sbjct: 447 ----KKDHVPSKDWLDFVVSTRAKTKIRGFIRKQ 476
>gi|73747961|ref|YP_307200.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|289431960|ref|YP_003461833.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. GT]
gi|452204331|ref|YP_007484460.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
gi|73659677|emb|CAI82284.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|288945680|gb|ADC73377.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
gi|452111387|gb|AGG07118.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
Length = 728
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 312/544 (57%), Gaps = 66/544 (12%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ DL+ S YL P +L L+ A A AH GQ R+SGEPFI HP+ VA L +L+LD
Sbjct: 3 FADLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDA 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENH 243
+++A LLHD ED N+ + E+I+++FGA V ++V+G TK+SKL + N
Sbjct: 63 ATLSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNA 121
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S++ +A++LR+M +AM E++RV+ +KLADR HNMRTL + P K+ SIA ET++++APL
Sbjct: 122 SLR--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPL 179
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG++++K +LE+L+F Y + Y +V V + + LE + IL + E +
Sbjct: 180 AHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFEKN-- 237
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+ E+ K YSIY+ + K S+G ++ + LR+++ P
Sbjct: 238 ----GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD-------- 285
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
CYH +G+VH +W PIP A DYIA PKPNGYQSLHT ++ LEVQ+RT
Sbjct: 286 ----CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTY 338
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
+M IAE G+AAH+ R KT + N RI WL + EW
Sbjct: 339 QMHHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWH 378
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
+ G + EF++++ D+ +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ +
Sbjct: 379 RDMRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIG 435
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKF 656
AK NG LV + L N EVVEI+T +K + WL + KT AR KI+ +
Sbjct: 436 AKANGRLVPLDYQLKNGEVVEIVT-----TKKDRGPSRDWLNVNMGYIKTHHAREKILAW 490
Query: 657 LREQ 660
++Q
Sbjct: 491 FKKQ 494
>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333924436|ref|YP_004498016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333749997|gb|AEF95104.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 723
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 315/531 (59%), Gaps = 57/531 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L+E + + Y ++ +R+A A AH GQKR SGE +I+HP+ +A IL EL+LD
Sbjct: 4 LFELEQKILLYNPSADIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDI 63
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHD VEDT V T IE FG+ V R+V+G V+KLGKL+ + S ++ +
Sbjct: 64 KTVAAGLLHDVVEDTGV-TLADIENNFGSEVARMVDG---VTKLGKLQFQ----SREERQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFLAM +++RVI++KLADRLHN+RTL KQ +A ETL FAPLA LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLVFFAPLAHRLGI 175
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y+IK ELE+LSF Y E Y +K ++A + E+ ++E ++L +K L+ + +
Sbjct: 176 YKIKWELEDLSFRYKEPEQYQHLKMQIAKTRAKREEYIQEVIRLLAEK------LNAVNI 229
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
+ EI+ K YSIY+ +++ + + ++ + +R+ L + CY L
Sbjct: 230 RAEIQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV------------LVDTVKDCYGAL 277
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+ H +W PIP KDYIA PK N YQSLHTT+I E +E+QIRT +M +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEP---VEIQIRTWDMHRVAEYG 334
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + GK + ++ +++WL + ++Q + +
Sbjct: 335 IAAHW-----------------KYKEGKQ---GDQDLDKKLAWLRQMMDFQHD---ARDA 371
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
REF++ + DL VFVFTP+G++ LP GAT +D+AY IHT++G++ V AKVNG +V
Sbjct: 372 REFMENLKIDLFSQSVFVFTPKGDVMELPAGATPLDFAYRIHTDVGHRTVGAKVNGRIVP 431
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++EIIT A S S + WL KT A+++I ++ +++
Sbjct: 432 LDYKLKNGNIIEIITSKASSGPS-----RDWLNIVKTSQAKNRIRQWFKKE 477
>gi|147668657|ref|YP_001213475.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. BAV1]
gi|146269605|gb|ABQ16597.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
Length = 728
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 312/544 (57%), Gaps = 66/544 (12%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ DL+ S YL P +L L+ A A AH GQ R+SGEPFI HP+ VA L +L+LD
Sbjct: 3 FADLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDA 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENH 243
+++A LLHD ED N+ + E+I+++FGA V ++V+G TK+SKL + N
Sbjct: 63 ATLSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNA 121
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S++ +A++LR+M +AM E++RV+ +KLADR HNMRTL + P K+ SIA ET++++APL
Sbjct: 122 SLR--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPL 179
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG++++K +LE+L+F Y + Y +V V + + LE + IL + E +
Sbjct: 180 AHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFEKN-- 237
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+ E+ K YSIY+ + K S+G ++ + LR+++ P
Sbjct: 238 ----GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD-------- 285
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
CYH +G+VH +W PIP A DYIA PKPNGYQSLHT ++ LEVQ+RT
Sbjct: 286 ----CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTY 338
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
+M IAE G+AAH+ R KT + N RI WL + EW
Sbjct: 339 QMHHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWH 378
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
+ G + EF++++ D+ +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ +
Sbjct: 379 RDMRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIG 435
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKF 656
AK NG LV + L N EVVEI+T +K + WL + KT AR KI+ +
Sbjct: 436 AKANGRLVPLDYQLKNGEVVEIVT-----TKKDRGPSRDWLNGNMGYIKTHHAREKILAW 490
Query: 657 LREQ 660
++Q
Sbjct: 491 FKKQ 494
>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
Length = 774
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 326/543 (60%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L ++ P+ ++ ++ +A +A EAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 39 SPEVLYQELIKSVKKYHPSTDISMIEKAYKVASEAHKDQKRKSGEPYIIHPLCVAIILAD 98
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT +T+E +E+EFG+ V +V+G TK+ +L K K E
Sbjct: 99 LELDKETIVAGLLHDAVEDT-WMTYEEVEKEFGSEVALLVDGVTKLGQLSYSKDKVE--- 154
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 155 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIA 211
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +VA L K +E + ++K+++ Q +
Sbjct: 212 MRLGISKIKVELDDLSLKYLKPDVYYDLVEKVA-LRKSAREEFVNS---IVKQVK--QHM 265
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++ ++ K +SIYK ++ +I+++ + +RII+ +
Sbjct: 266 EDANIRAQVDGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------------DTVKD 313
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 314 CYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTLIGPNGQPF--------EIQIRT 365
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G+ P GK+ +++WL I EW
Sbjct: 366 FEMHKTAEYGIAAHWKYK---------ETSDGKKP-GKSE-------EEKLNWLRQILEW 408
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP+G++K LP G+T +D+AY +H+ +GNK
Sbjct: 409 QRDMSDN---REFMSLLKNDLDLFADSVYCFTPQGDVKTLPNGSTPIDFAYSVHSAVGNK 465
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV + + N + +EIIT S+++ + WL+ K+ A++KI ++
Sbjct: 466 MVGARVNGKLVPIEYKIKNGDRIEIIT-----SQNSQGPSRDWLKIVKSTQAKNKINQWF 520
Query: 658 REQ 660
+++
Sbjct: 521 KKE 523
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 308/515 (59%), Gaps = 54/515 (10%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
+ LV++A A +AH Q R+SGEP+IIHP++VA IL +LE+D ++AAG LHD VEDT
Sbjct: 1 MALVQKAYEYADKAHKEQFRKSGEPYIIHPIQVAGILADLEMDAATVAAGFLHDVVEDTP 60
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
+ + + I E F V +V+G V+KLGK+K K++ ++ +A++ R+MF+AM +++R
Sbjct: 61 I-SKQDIAETFNEEVAMLVDG---VTKLGKIKFKSQ----EEQQAENHRKMFVAMAQDIR 112
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL H+P KQ IA ET+++FAPLA LG+ +IK ELE+ + Y N
Sbjct: 113 VILIKLADRLHNMRTLKHLPAEKQRRIANETIEIFAPLAHRLGISKIKWELEDTALRYLN 172
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
+ Y R+ +L K+ E E+ ++ ++ED L + + E+ K YSIY+
Sbjct: 173 PQQYY----RIVNLMKKKRDEREQYVDDVIHEMEDS--LRDVDIHAELSGRPKHIYSIYR 226
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
++ NE+ + +RII+ + + CY VLG++H W P+P KD
Sbjct: 227 KMVLQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTCWKPMPGRFKD 274
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PKPN YQSLHTT+I + LEVQIRT +M IAE G+AAH++ +
Sbjct: 275 YIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTRDMHRIAEYGVAAHWAYK-------- 323
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
K + ++SW I E+Q E + + EF++ + DL V
Sbjct: 324 ---------EEKEHVASRNTFDKKLSWFREILEFQNE---STDAEEFIEALKIDLFSDMV 371
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
FVFTP+G++ LP G+ +D+AY IH+EIGNK + AKVNG +V+ + L +++EI+T
Sbjct: 372 FVFTPKGDVIELPSGSVPIDFAYRIHSEIGNKTIGAKVNGKMVTLDYRLRTGDILEILT- 430
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
SK ++ + WL+ A+T A+HKI +F ++Q
Sbjct: 431 ----SKHSYGPSQDWLKLAQTSQAKHKIKQFFKKQ 461
>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
Length = 728
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 211/542 (38%), Positives = 310/542 (57%), Gaps = 62/542 (11%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ DL+ S YL P +L + A A AH GQ R+SGEPFI HP+ VA L +L+LD
Sbjct: 3 FADLKEKASKYLPPEKLVFLEEAYNYAAAAHTGQMRKSGEPFIEHPLNVAITLADLQLDS 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL----GKLKCKNENHSV 245
++AA LLHD ED ++ + E+IE++FGA V ++V+G TK+SKL G + +
Sbjct: 63 ATLAAALLHDVPEDAHI-SLEQIEKKFGADVAKLVDGVTKLSKLALGPGIEDARRPGGNA 121
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+A++LR+M +AM+E++RV+ +KLADR HNMRTL + K+ SIA ET++++APLA
Sbjct: 122 SLRQAENLRKMLVAMSEDLRVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPLAH 181
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG++++K +LE+L+F Y + Y +V V + + +E + IL + E +
Sbjct: 182 RLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRKNYIEHVSAILQSEFEKN---- 237
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+K E+ K YSIY+ + K S+G ++ + LR+++ P
Sbjct: 238 --GLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD---------- 285
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
CYH +G+VH +W PIP A DYIA PKPNGYQSLHT ++ LEVQ+RT +M
Sbjct: 286 --CYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTYQM 340
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
IAE G+AAH+ R KT + N RI WL + EW +
Sbjct: 341 HHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWHRD 380
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
G + EF++++ D+ +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ + AK
Sbjct: 381 MRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIGAK 437
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLR 658
NG LV + L N EVVEI+T +K + WL + KT AR KI+ + +
Sbjct: 438 ANGRLVPLDYQLKNGEVVEIVT-----TKKDRGPSRDWLNANMGYIKTHHAREKILAWFK 492
Query: 659 EQ 660
+Q
Sbjct: 493 KQ 494
>gi|306830425|ref|ZP_07463595.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325977390|ref|YP_004287106.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304427450|gb|EFM30552.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325177318|emb|CBZ47362.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 739
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 325/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N A+ ++W+ + E Q+ N + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 501
Query: 677 VADSG 681
+ G
Sbjct: 502 FQEQG 506
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 317/548 (57%), Gaps = 68/548 (12%)
Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
L PS++ D E + YL P EL+ +RRA + AH GQKR SG FI
Sbjct: 5 LQPSITPDELLERAGR-----------YLGPAELDWLRRAFEFSKAAHQGQKRASGRDFI 53
Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
HP+ VA IL +LELD ++ A LLHDTVEDT V T E +E EFG V +V+G TK+++
Sbjct: 54 EHPLAVALILADLELDAATLVAALLHDTVEDTPV-TLEEVEREFGPEVALLVDGVTKLNQ 112
Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
+ E + + +A++LR+MFLAM ++RV+++KLADRLHNMRTL+ +P KQ +
Sbjct: 113 I-------EWRTRLEEQAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAK 165
Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
+ ETL++FAPLA LGM QI+ ELE+L+ Y E Y R +A+ E EE +
Sbjct: 166 SRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERY----RELAERIPRKRAEREELAQ 221
Query: 353 ILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
+++ ++ L ++ +I+ K YSIY+ + + ++++ + +R+I+
Sbjct: 222 VIIATLK--ARLAEAGIRADIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIV----- 274
Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+ CY LG+VH IW P+P KDYIATPK N YQSLHTT+I E
Sbjct: 275 -------DTVKDCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEP--- 324
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
E+QIRT +M AE GIAAH+ + RG+T + + +++W
Sbjct: 325 FEIQIRTWDMHRTAEYGIAAHWRYK----------------ERGRT----DRDFDAKLAW 364
Query: 533 LNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
L + EWQ + G+ +REF++++ D+ VFVFTP+G++ +LP G+T VD+AY IHT
Sbjct: 365 LRQVLEWQNDL-GD--AREFMESLKIDVFSDEVFVFTPKGDVIDLPAGSTPVDFAYRIHT 421
Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHK 652
EIG++ V AKVNG +V + L N ++VEI+T SA WL+ +T +AR +
Sbjct: 422 EIGHRCVGAKVNGRIVPLDYRLKNGDIVEILTNKQSGGPSA-----DWLQFVRTSTARSR 476
Query: 653 IMKFLREQ 660
I ++L++Q
Sbjct: 477 IRQWLKKQ 484
>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
Length = 770
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 319/543 (58%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL I P+ +L + +A A +AH+GQ R+SGEP+IIHP+ VA IL E
Sbjct: 34 SPEELYKDLIAAIKKYHPSTDLSDIEKAYETARKAHEGQFRKSGEPYIIHPLCVAIILAE 93
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD ESI AGLLHD VEDT V+T E + +EFG V +V+G TK+++L N H
Sbjct: 94 LELDKESIIAGLLHDVVEDT-VMTSEDVAKEFGDEVALLVDGVTKLTQL------NYQHD 146
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ + P KQ + ET++++AP+A
Sbjct: 147 KIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIA 206
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +V + E K ++K++ +
Sbjct: 207 HRLGISKIKVELDDLSMKYLMPDVYNDLVEQV----NLNRPGREAFIKSIIKEV--GMHI 260
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ EI K +SIY+ ++ +++++ I +RI + +
Sbjct: 261 SNAGIEAEIDGRVKHFFSIYRKMVNQNKTLDQIYDIFAVRIKV------------DTVKD 308
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 309 CYAALGVIHEMYKPIPGRFKDYIAMPKPNNYQSLHTTLIASNGQPF--------EIQIRT 360
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM IAE GIAAH+ + GKT +N + ++SWL I EW
Sbjct: 361 YEMHKIAEYGIAAHW-----------------KYKEGKTGEKDNQSEEAKLSWLRQILEW 403
Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q+E N +EF+ +I D L V+ FTP G++KNLP G+ +D+AY IH+ +GNK
Sbjct: 404 QKEMSDN---KEFLSSIKNDLNLFSDSVYCFTPSGDVKNLPAGSCPIDFAYSIHSAVGNK 460
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ +V+ N + +EIIT S+++ + WL K+ A++KI ++
Sbjct: 461 MVGARVNGKLVTIDYVIKNGDRIEIIT-----SQNSKGPSRDWLSIVKSTQAKNKINQWF 515
Query: 658 REQ 660
+++
Sbjct: 516 KQE 518
>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
Length = 717
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 299/523 (57%), Gaps = 59/523 (11%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
EL+ +A A E H GQ R+SGEPF HP EVA IL EL +D +I AGLLHDTVEDT+
Sbjct: 21 ELIEKAYNFAKEKHKGQYRKSGEPFFSHPAEVAYILAELRMDVPTIVAGLLHDTVEDTDT 80
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E IE EFG+ V IV+G TK+ S ++ A+ R + +++ E++RV
Sbjct: 81 -TIEEIEREFGSEVAFIVKGVTKLEGY-------RFTSKEEADAESFRNLLISLAEDIRV 132
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
+IVKLADRLHNMRTL HM Q A ETL ++APLA LGMY+IK+ELE+LS Y +
Sbjct: 133 LIVKLADRLHNMRTLEHMKRESQLRNAKETLTIYAPLANRLGMYRIKNELEDLSLKYIDP 192
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
E YA+++R+V ++ + LE+ + + +++E + +K +I+ K Y IY+
Sbjct: 193 EAYAEIERKVKEVKRRLLPYLEDVIETVKRELERN------GIKGDIQWRIKHIYGIYRK 246
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ EV +A +R+I CY VLG++H IWTP+P +KDY
Sbjct: 247 MVTKGIPFEEVYDVAGIRVI------------TDTVANCYQVLGIIHSIWTPVPGRIKDY 294
Query: 447 IATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
IA PKPN YQSLHTT++ P + F +E QIRT +M +AE GIAAH+
Sbjct: 295 IAVPKPNMYQSLHTTVVGP---KGQF-IEFQIRTWKMHQVAEFGIAAHWK---------- 340
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
+ GR L+ + R WL + EW +E +EF+D++ DL +
Sbjct: 341 YKEGGGR--------LDESE-KERFLWLRNLLEWVKE---EKDPKEFIDSVRTDLYNENI 388
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
+VFTP+G+IK LP GAT VD+AY +HT +G++ AAKVNG LV + L + + VEIIT
Sbjct: 389 YVFTPKGDIKTLPVGATPVDFAYAVHTSVGHRCRAAKVNGKLVPLNYRLQSGDRVEIITG 448
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
N + WL+ KT ARH I FLR++ A +I
Sbjct: 449 NVERPS------RDWLDFVKTSKARHAIRSFLRKEENERARKI 485
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 315/524 (60%), Gaps = 66/524 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S N++ L+ +A A +AH+GQ R SGEP+I+HPVEVA IL LELD +IA+GLLHD +
Sbjct: 15 SENDINLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVI 74
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT++ T++ I+ EFG + +V+G V+KLG ++ K S + +A+++R+M +AM
Sbjct: 75 EDTSI-TYDDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL ++ KQ A ETL+++AP+A LGM IK ELE+LS
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + +DY + +VA KE E+ ++E L+ K+++ L+ + +K E+ K Y
Sbjct: 187 RYLHPDDYYSLVEKVAKKRKEREESIKE----LIDKLKEK--LNEIGIKAEVDGRPKHFY 240
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIYK + + + ++ + +R+I+ + + CY LG VH +W P+P
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGAVHTLWKPMPG 288
Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
KDYIA PKPN YQSLHTT+I PF E+QIRT +M AE GIAAH+
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+ ++SWL + EWQ E ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V+VFTP+G++ +LP G+T +D+AY IHTEIG+++ AKVNG +V + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T ++ S + WL+ K+ A++KI ++ +++
Sbjct: 438 GDIVEILT----TTNSDRGPSRDWLQIVKSSQAKNKIRQWFKKE 477
>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 718
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 315/524 (60%), Gaps = 66/524 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S N++ L+ +A A +AH+GQ R SGEP+I+HPVEVA IL LELD +IA+GLLHD +
Sbjct: 15 SENDINLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVI 74
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT++ T++ I+ EFG + +V+G V+KLG ++ K S + +A+++R+M +AM
Sbjct: 75 EDTSI-TYDDIKNEFGQEIADLVDG---VTKLGMIEYK----SKVEQQAENMRKMLIAMA 126
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL ++ KQ A ETL+++AP+A LGM IK ELE+LS
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + +DY + +VA KE E+ ++E L+ K+++ L+ + +K E+ K Y
Sbjct: 187 RYLHPDDYYSLVEKVAKKRKEREESIKE----LIDKLKEK--LNEIGIKAEVDGRPKHFY 240
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIYK + + + ++ + +R+I+ + + CY LG VH +W P+P
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGAVHTLWKPMPG 288
Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
KDYIA PKPN YQSLHTT+I PF E+QIRT +M AE GIAAH+
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+ ++SWL + EWQ E ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V+VFTP+G++ +LP G+T +D+AY IHTEIG+++ AKVNG +V + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIYYELKN 437
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T ++ S + WL+ K+ A++KI ++ +++
Sbjct: 438 GDIVEILT----TTNSDRGPSRDWLQIVKSSQAKNKIRQWFKKE 477
>gi|14325225|dbj|BAB60670.1| Rel [Listeria monocytogenes]
Length = 738
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 313/534 (58%), Gaps = 55/534 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L LV++A A ++ Q R+SGEP+IIHP++VA IL EL++D ++A+G LHD
Sbjct: 19 YMNQEHLALVKKAYEFARDSRKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT VT +EE FG+ V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 79 VVEDT-PVTLADLEEVFGSEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FAPLA LG+ ++K ELE+
Sbjct: 131 MAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L K+ E ++ + ++ LD + ++ +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMKQKRDARERYLHDVIDGVNEN--LDELNIQADISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +RI++ S + CY VLG++H W P+
Sbjct: 245 IYSIYRKMSEQNKQFNEIYDLLAVRIVV------------SSIKDCYAVLGIIHTRWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I E LEVQIRT EM IAE G+AAH+
Sbjct: 293 PGRFKDYIAMPKSNMYQSIHTTVIGPQGEP---LEVQIRTHEMHQIAEYGVAAHW----- 344
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G+ KT N +++W I E+Q E + + EF++++ D
Sbjct: 345 -------AYKEGKVVNSKTSFDN------KLTWFREILEYQNE---SDNAEEFMESLKLD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP+G++ LP G+ +D+AY +HTEIGNK + AK+NG +V+ + L ++
Sbjct: 389 LFSDVVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
++I+T SK ++ + WL+ +T AR+KI +F + QA E D V
Sbjct: 449 IDILT-----SKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLV 497
>gi|358066224|ref|ZP_09152755.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
gi|356695553|gb|EHI57181.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
Length = 762
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 324/543 (59%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL +I P +++ +V +A +A++AH QKR+SGEP+IIHP+ VA IL +
Sbjct: 25 SPEILYQDLIKSIRKYHPSDDISMVEKAYRIAYDAHKEQKRKSGEPYIIHPLCVAIILAD 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD ESI AG+LHD VEDT V+T + + +EFG+ V +V+G TK+++L K
Sbjct: 85 LELDKESIVAGILHDVVEDT-VMTLDEVAKEFGSEVALLVDGVTKLTQLSWSMDK----- 138
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
Q+++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 139 -QEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS Y + Y + +++ L K+ + + ++++++
Sbjct: 198 HRLGISKIKIELDDLSLKYLEPDVYYDLAEKIS-LRKDAREAFVQG---IVEEVKSHMVE 253
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ + E R K +SIYK ++ +++++ + +RII++ +
Sbjct: 254 AGIDARVEGR--VKHFFSIYKKMVNQDKTLDQIYDLFAVRIIVE------------SVKD 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 300 CYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPF--------EIQIRT 351
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G + ++SWL I EW
Sbjct: 352 FEMHRTAEFGIAAHWKYKESGSGQIAAGSEEA-----------------KLSWLRQILEW 394
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N +EF++ I DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 395 QTDMSDN---KEFLNLIKSDLDLFSDSVYCFTPSGDVKNLPSGSTPVDFAYAIHSAVGNK 451
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ +V+ N + +EIIT S+++ + WL+ K+ A++KI ++
Sbjct: 452 MVGARVNGKLVNIDYVIQNGDRIEIIT-----SQNSKGPSRDWLKLVKSTQAKNKINQWF 506
Query: 658 REQ 660
+ +
Sbjct: 507 KTE 509
>gi|336421845|ref|ZP_08602000.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009694|gb|EGN39685.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 781
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 322/550 (58%), Gaps = 77/550 (14%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
++P+RL+E L I P+ ++ ++ +A LA +AH GQ R+SGEP+I+HP+ VA IL
Sbjct: 42 ENPDRLYEMLIARIRRYHPSTDVSMIEKAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILA 101
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LE+D E+I +G+LHD VEDT V + E I+ EFG V +V+G V+KLG+L ++
Sbjct: 102 DLEMDKETIVSGMLHDVVEDTEV-SEEDIKREFGEEVALLVDG---VTKLGRLSYSSDKL 157
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKAKETMDIYAPI 214
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK+EL++L+ Y+ E + + N+I +K E ++F
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVF-----------------FDLVNQINARKTEREEF 257
Query: 364 LDLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
+ + ++K ++ K +SIYK ++ ++++V + +RII+
Sbjct: 258 VQQIVDEVSTHMKNASIKADVNGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIV----- 312
Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+ CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ + +
Sbjct: 313 -------DSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP--- 362
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
E+QIRT+EM AE GIAAH+ + S GK A ++SW
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSW 406
Query: 533 LNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
L I EWQ + N REF+ I DL V+ FTP+G++KNLP G+T +D+AY I
Sbjct: 407 LRQILEWQRDMSDN---REFLSLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAI 463
Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSAR 650
H+ +GNKMV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A+
Sbjct: 464 HSAVGNKMVGARVNGKLVNIEYKIQNGDRIEILT-----SQNSRGPSRDWLGIVKSTQAK 518
Query: 651 HKIMKFLREQ 660
+KI ++ +++
Sbjct: 519 NKINQWFKKE 528
>gi|171778853|ref|ZP_02919915.1| hypothetical protein STRINF_00774 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379704558|ref|YP_005203017.1| GTP pyrophosphokinase (stringent response) [Streptococcus
infantarius subsp. infantarius CJ18]
gi|171282499|gb|EDT47923.1| RelA/SpoT family protein [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374681257|gb|AEZ61546.1| GTP pyrophosphokinase (stringent response) [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 740
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 326/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+I+HP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIVHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + + ++
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTEEQGLYGDVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ +SW+ + E Q+ N + +FVD++
Sbjct: 346 KKGIKGKV-----------------DSQEQAVGMSWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +FL+ Q + + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFLKNQDKELSVNKGRELLMDY 501
Query: 677 VADSG 681
D G
Sbjct: 502 FQDQG 506
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 215/532 (40%), Positives = 302/532 (56%), Gaps = 56/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L T +YL+ E ++ +A + + AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3 RINEILDKTSAYLNEQEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SIA+GLLHDTVEDT T + IEE FG V IV+G TK+S L + K E
Sbjct: 63 AASIASGLLHDTVEDTKA-TVDEIEELFGEEVADIVDGVTKIS-LIPFETKEE------A 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM E++RV++VKLADRLHNMRTL PHKQ+ IA ET+ ++APLA LG
Sbjct: 115 QAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQALIAQETMDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+++IK+ELE+ SF Y + YA++ VA + E +E L ++ L
Sbjct: 175 LHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHL------NELLGPNN 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K I K +S++ + +I++V+ + R+I++ + CYHV
Sbjct: 229 IKARIVGRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI------------RECYHV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W P+P KDYI+ PK N YQSLHTT++ E R+E+QIRTEEM +AE
Sbjct: 277 LGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGE---RIEIQIRTEEMHRLAEE 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH+ + RGK N R WL I +WQ E
Sbjct: 334 GVAAHWKYK--------------ERERGKF----NPKDVERFQWLRQIMDWQREL---KD 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV + DL V+VFTP+G++K LP+GAT VD A++IHT +G AKVNG LV
Sbjct: 373 SREFVTNLRFDLFQDEVYVFTPKGDVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGKLV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N + VEIIT + ++ WL+ KT AR ++ F+R +
Sbjct: 433 PLETPLKNGDTVEIIT------DKNRRPNRDWLKFVKTAKARTRVKHFIRTE 478
>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
Length = 722
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/519 (39%), Positives = 302/519 (58%), Gaps = 66/519 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
+ + A +AH+GQ R SGEP+IIHP+ VA IL +LELD +IAAGLLHD VEDT+
Sbjct: 20 KFIEETYRFAEKAHEGQTRISGEPYIIHPLSVAHILADLELDVVTIAAGLLHDVVEDTDS 79
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
E IEE+FG + +V+G V+KL ++ KN+ + + ++LR+MFLAM +++RV
Sbjct: 80 -PLETIEEKFGVEIALLVDG---VTKLSRISYKNK----MEQQVENLRKMFLAMAKDIRV 131
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL H+ KQ I+ ETL++FAPLA LG+++IK ELE+L+ Y
Sbjct: 132 ILIKLADRLHNMRTLKHLAEPKQKEISEETLEIFAPLAHRLGIFKIKWELEDLALRYLEP 191
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+ Y ++ +A E E+ + +IL +K+E+ + +K +I+ K YSIYK
Sbjct: 192 KKYYELVDGIAQKRAEREEYIARVTQILAEKLEN------VGIKADIQGRPKHFYSIYKK 245
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+L+ + + E+ + +R+I+ + CY LG++H +W PIP KDY
Sbjct: 246 MLEQQKELAEIYDLLAVRVIV------------DTVKDCYGALGIIHTLWKPIPGRFKDY 293
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PK N YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 294 IAMPKSNMYQSLHTTVIGPNGEPF--------EIQIRTWEMHRTAEYGIAAHWR------ 339
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ GR + +++WL + EWQ + +REF++T+ DL
Sbjct: 340 ----YKEGGGRG---------DEEFENKLAWLRQLLEWQNDM---RDAREFMETLKIDLF 383
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ LP GA +D+AY IHT++G++ + AKVNG +V + LAN ++VE
Sbjct: 384 SDAVFVFTPKGDVVELPAGAIPIDFAYRIHTQVGHRCIGAKVNGKIVPLDYKLANGDIVE 443
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
I+T K A + WL KT AR KI + +++
Sbjct: 444 ILT-----QKQAAGPSRDWLNIVKTSEARSKIRAWFKKE 477
>gi|452202850|ref|YP_007482983.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
gi|452109909|gb|AGG05641.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
Length = 728
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 312/544 (57%), Gaps = 66/544 (12%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ DL+ S YL P +L L+ A A AH GQ R+SGEPFI HP+ VA L +L+LD
Sbjct: 3 FADLKEKASKYLPPEKLTLLEEAYNYAAAAHAGQMRKSGEPFIEHPLNVAMTLADLQLDA 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENH 243
+++A LLHD ED N+ + E+I+++FGA V ++V+G TK+SKL + N
Sbjct: 63 ATLSAALLHDVPEDANI-SLEQIDKKFGADVAKLVDGVTKLSKLALGPAIEDARRPGGNA 121
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S++ +A++LR+M +AM E++RV+ +KLADR HNMRTL + P K+ SIA ET++++APL
Sbjct: 122 SLR--QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALSPEKRRSIAKETMEIYAPL 179
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG++++K +LE+L+F Y + Y +V V + + LE + IL + + +
Sbjct: 180 AHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQNYLEHVSAILQGEFKKN-- 237
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+ E+ K YSIY+ + K S+G ++ + LR+++ P
Sbjct: 238 ----GLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD-------- 285
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
CYH +G+VH +W PIP A DYIA PKPNGYQSLHT ++ LEVQ+RT
Sbjct: 286 ----CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTY 338
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
+M IAE G+AAH+ R KT + N RI WL + EW
Sbjct: 339 QMHHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWH 378
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
+ G + EF++++ D+ +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ +
Sbjct: 379 RDMRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIG 435
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKF 656
AK NG LV + L N EVVEI+T +K + WL + KT AR KI+ +
Sbjct: 436 AKANGRLVPLDYQLKNGEVVEIVT-----TKKDRGPSRDWLNVNMGYIKTHHAREKILAW 490
Query: 657 LREQ 660
++Q
Sbjct: 491 FKKQ 494
>gi|357636371|ref|ZP_09134246.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
gi|357584825|gb|EHJ52028.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
Length = 740
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 203/521 (38%), Positives = 311/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +AL A + H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNASDVAFVEKALDYAQQCHSGQLRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T + +EE+FG VR IV+G V+KLGK++ K S Q+ A++ R+M +A
Sbjct: 79 VVEDTEA-TLDDLEEKFGTDVRNIVDG---VTKLGKVEYK----SHQEQLAENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M+ ++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K+ R L KE +E E ++KKI+ ++ + ++ EI K
Sbjct: 191 AFRYLNEVEFYKISR----LMKEKRREREALVDEIVKKIK--EYTEEQSLYGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I L +P + Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTKEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V +N AL ++W+ + E Q+ N + +FVD++ D
Sbjct: 349 IKGKV-----------------DNKESALGMNWIQELIELQD--ASNGDAIDFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT + + F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIIT-----NPNPFGPSRDWIKIVKTNKARNKIRQFFKNQ 485
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 206/523 (39%), Positives = 308/523 (58%), Gaps = 57/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++EL+++A A +AH GQ R+SGEP+I HPVEVA IL L++D +I +G LH
Sbjct: 12 TYLDEKDIELIKKAYEYAKKAHAGQLRKSGEPYITHPVEVAGILVNLKMDVTTIMSGFLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T + + EFG V +V+G TK+ E S +D +A++ R+MF+
Sbjct: 72 DVVEDTPV-TLDDVRNEFGDNVAMLVDGVTKLRHF-------EYSSKEDQQAENHRKMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++R +IVKLADRLHNMRTL +M KQ A ET+++FAPLA LG+ IK ELE+
Sbjct: 124 AMARDLRCVIVKLADRLHNMRTLKYMTKEKQIQKANETMEIFAPLANRLGISAIKWELED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMTVKTEIRSVC 377
+S Y N + Y K + +L K+ +E E + + +ED +++ + +K EI
Sbjct: 184 ISLRYLNPQQYYK----IVNLMKQKREERE---AYIAQVVEDLKKYVKSVHIKAEISGRP 236
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ ++ NE+ + +RII++ + CY +LG++H W
Sbjct: 237 KHIYSIYRKMVNQHKQFNEIYDLFAVRIIVE------------SIKDCYAILGIIHTHWK 284
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + LEVQ+RTEEM +AE GIAAH++ +
Sbjct: 285 PMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQVRTEEMHDVAEYGIAAHWAYK 341
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GKT +NN +++W I E+Q+E +REF++++
Sbjct: 342 -----------------EGKTKNINN-KFEDKLTWFREILEYQKE---TDDAREFMESLK 380
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL VFVFTP+G++ LP G+ +D+AY IHTEIGNK V A+VNG +V + L
Sbjct: 381 MDLFSDTVFVFTPKGDVIELPVGSVPIDFAYRIHTEIGNKTVGARVNGKMVPLDYKLKTG 440
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VE++T SK ++ + WL+ AK+ + ++KI ++ + Q
Sbjct: 441 DIVEVVT-----SKHSYGPSRDWLKIAKSSAVKNKIRQWFKRQ 478
>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
Length = 802
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 216/556 (38%), Positives = 318/556 (57%), Gaps = 62/556 (11%)
Query: 103 HVACKRWRLCLSPSVSSDAFKEDSPERLWEDL-RPTISYLSPNELELVRRALMLAFEAHD 161
HVA K +P DA +PE + +L R T YLS ++ ++ +A A EAH+
Sbjct: 32 HVAEK----SFAPEAKKDALAPKTPEERFAELQRLTSVYLSEDDEAMLAKAFRFASEAHE 87
Query: 162 GQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVR 221
GQ R+SGEPF+ HPVEVA IL +L +D E++ A LLHDTVEDT+V T +++E EF V
Sbjct: 88 GQCRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTSV-TRDQVEAEFNPQVA 146
Query: 222 RIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTL 281
++VEG TK++++ E S+ D +A +R+MF+AM++++RVI++KLADRLHNMRTL
Sbjct: 147 QLVEGVTKITRI-------EVESLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTL 199
Query: 282 SHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 341
+ ++ A ETL+++AP+A LG+ IK ELE+LSF Y + ++ R V +
Sbjct: 200 GALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKFKQISRMVTESRS 259
Query: 342 EHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIA 401
E E L++ IL ++E + ++ +I K YSIY+ + K +E+ +
Sbjct: 260 EREGYLDQIISILHDEMEK------VNIQAQIMGRPKHLYSIYQKMTKKGKGFSEIYDLI 313
Query: 402 QLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT 461
+R+I+K + CY LG VH +W P+P KDYIA PK N YQSLHTT
Sbjct: 314 AVRVIVK------------SVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTT 361
Query: 462 LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
+I + LEVQIRTE+M +E G+AAH+ + G+S
Sbjct: 362 VIG---PAGRPLEVQIRTEDMHRQSEYGVAAHWR----------YKEKGGKS-------- 400
Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGA 581
+ +++WL + +WQ+E + SREF+ + DL + VFVFTP+GE+ +L G+
Sbjct: 401 -GDALDQQLAWLRQMVDWQDE---SQDSREFLKDLKVDLAPTEVFVFTPKGEVMSLRAGS 456
Query: 582 TVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWL 641
T VD+AY IHTE+GN V AKVNG +V T+ L + V+I+T + S + WL
Sbjct: 457 TPVDFAYAIHTEVGNHCVGAKVNGAIVPLTYELQLGDRVDILTQKSASPS------RDWL 510
Query: 642 EHAKTRSARHKIMKFL 657
KT SAR KI +
Sbjct: 511 GIVKTPSARSKIRSYF 526
>gi|336063522|ref|YP_004558381.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
gi|334281722|dbj|BAK29295.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
Length = 739
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 325/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y + ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLDEIEFYKISHMMKEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N A+ ++W+ + E Q+ N + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 501
Query: 677 VADSG 681
+ G
Sbjct: 502 FQEQG 506
>gi|167758796|ref|ZP_02430923.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
gi|167663536|gb|EDS07666.1| RelA/SpoT family protein [Clostridium scindens ATCC 35704]
Length = 781
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 321/550 (58%), Gaps = 77/550 (14%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
++P+RL+E L I P+ ++ ++ +A LA +AH GQ R+SGEP+I+HP+ VA IL
Sbjct: 42 ENPDRLYEMLIARIRRYHPSTDVSMIEKAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILA 101
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LE+D E+I +G+LHD VEDT V E I+ EFG V +V+G V+KLG+L ++
Sbjct: 102 DLEMDKETIVSGMLHDVVEDTEVGE-EDIKREFGEEVALLVDG---VTKLGRLSYSSDKL 157
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+
Sbjct: 158 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKAKETMDIYAPI 214
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK+EL++L+ Y+ E + + N+I +K E ++F
Sbjct: 215 AQRLGISKIKTELDDLALKYSQPEVF-----------------FDLVNQINARKTEREEF 257
Query: 364 LDLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPC 412
+ + ++K ++ K +SIYK ++ ++++V + +RII+
Sbjct: 258 VQQIVDEVSTHMKNASIKADVNGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIV----- 312
Query: 413 SGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFR 472
+ CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ + +
Sbjct: 313 -------DSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP--- 362
Query: 473 LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISW 532
E+QIRT+EM AE GIAAH+ + S GK A ++SW
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYK--------------ESNDGKKSV--EAQEEEKLSW 406
Query: 533 LNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
L I EWQ + N REF+ I DL V+ FTP+G++KNLP G+T +D+AY I
Sbjct: 407 LRQILEWQRDMSDN---REFLSLIKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAI 463
Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSAR 650
H+ +GNKMV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A+
Sbjct: 464 HSAVGNKMVGARVNGKLVNIEYKIQNGDRIEILT-----SQNSRGPSRDWLGIVKSTQAK 518
Query: 651 HKIMKFLREQ 660
+KI ++ +++
Sbjct: 519 NKINQWFKKE 528
>gi|322437264|ref|YP_004219476.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella tundricola MP5ACTX9]
gi|321164991|gb|ADW70696.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella tundricola MP5ACTX9]
Length = 826
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 299/525 (56%), Gaps = 58/525 (11%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
++LE++RRA + H GQ R SGEP+IIHP+EV +IL +L++D +IAAGLLHD VED
Sbjct: 109 DDLEIIRRAWAFCIQQHAGQLRASGEPYIIHPLEVCQILADLKMDSTAIAAGLLHDAVED 168
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T+V + E I + F V IVEG V+KL K+K N +D +A+++R+M LAM +
Sbjct: 169 TDVTSPE-IAKRFNEQVAHIVEG---VTKLDKIKFANR----EDHQAENIRKMLLAMVTD 220
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
VRV+I+KLADRLHNMRTL H+ P KQ IA ETL ++APLA LGM +++ ELE+L+F Y
Sbjct: 221 VRVVIIKLADRLHNMRTLEHLKPEKQQKIARETLDIYAPLAHRLGMGKLRGELEDLAFRY 280
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
T+ Y +V + V L +E+ L + + K+ + + + S K YSI
Sbjct: 281 TDPYAYLQVAQEVEHLRDANEETLTNIVETVRGKLAE------AGIDGRVESRIKRLYSI 334
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
+ + + +++V + +R+I C VG CY V G++ +W P+P
Sbjct: 335 QQKLTAQKIPVDQVYDLLAVRVI-----CHTVGE-------CYAVFGILQNLWRPVPGRF 382
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KD+IATP+PN YQSLHTTL + + EVQIRTEEM IAE GIAAH+
Sbjct: 383 KDFIATPRPNLYQSLHTTL---MAPGGHQFEVQIRTEEMHRIAEEGIAAHW--------- 430
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+ K +A R++W+ + EWQ E EF+ T+ DL
Sbjct: 431 -----------KYKANDAVSAKDEQRLAWVRQLMEWQREMT---DPNEFMSTLKIDLYPE 476
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
V+ FTP+G++ LPK A+ +D++Y IHTE+GN + AKVNG +V L N ++VEI
Sbjct: 477 EVYTFTPKGKVVVLPKDASPIDFSYAIHTEVGNTTIGAKVNGRIVPLRTKLRNGDIVEI- 535
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
S+++ + WL K+ AR+KI +L E A EI
Sbjct: 536 -----STQTGHAPSRDWLSFTKSSRARNKIKHWLNEHQRERAIEI 575
>gi|374337215|ref|YP_005093915.1| GTP pyrophosphokinase [Streptococcus macedonicus ACA-DC 198]
gi|372283315|emb|CCF01484.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
macedonicus ACA-DC 198]
Length = 739
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 324/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N + ++W+ + E Q+ N + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQVVGMNWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 501
Query: 677 VADSG 681
+ G
Sbjct: 502 FQEQG 506
>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
Length = 741
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 303/521 (58%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + + +F++++
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVYTSRARNKIKRYFKQ 483
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 297/515 (57%), Gaps = 55/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
EL L+ RA A+E H+GQ R+SGEP+I HP+ VA +L +L D IAAG LHD VEDT
Sbjct: 45 ELSLICRAFNFAYELHEGQYRKSGEPYIAHPIAVASLLRDLGGDKAMIAAGFLHDVVEDT 104
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IEE FGA VR++VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 105 DV-TLEEIEERFGAEVRQLVEGVTKLSKFN-FSSKTER------QAENFRRMFLAMAKDI 156
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVIIVKLADRLHNMRTL H+ P KQ SIA ET ++FAPLA LG+ ++K ELE+L+F Y
Sbjct: 157 RVIIVKLADRLHNMRTLEHLKPEKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYL 216
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E Y V+ VA+ + E LE+ +++L +++ L EI+ K Y IY
Sbjct: 217 EPEAYRAVQSLVAEKRTDREARLEKVSEMLRERL-----TSLGINVREIKGRPKHLYGIY 271
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + + +E+ IA LRII+ K CY L +VH + PIP K
Sbjct: 272 QKMQRQQKEFHEIYDIAALRIIVDSK------------DECYRALAVVHDAFRPIPGRFK 319
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT++ M EVQIRT EM IAE GIAAH+
Sbjct: 320 DYIGLPKPNRYQSLHTTVVGLNGRPM---EVQIRTLEMHHIAEYGIAAHWK--------- 367
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ G S T L+ + + +WL + EWQ + ++E+VD + +L
Sbjct: 368 -YKETGGSS----TAQLSQED--EKFTWLRQLLEWQNDL---KDAQEYVDNLKDNLFEDD 417
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G++ L +GAT VD+AY IHTEIG+ M A++NG L N ++VEIIT
Sbjct: 418 VYVFTPKGDVVALAQGATPVDFAYHIHTEIGHHMKGARINGRWSVLDTPLQNGDIVEIIT 477
Query: 625 Y-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
NA S WL T SAR++I ++ +
Sbjct: 478 QKNAHPSLD-------WLNFVVTPSARNRIRQWYK 505
>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
Length = 748
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 301/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V A A +AH+GQ R SG+P+IIHP +VA L L+LD +++AAG LHD
Sbjct: 19 YMNDDDIAFVESAYEFARKAHEGQFRVSGQPYIIHPTQVAGTLATLKLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I+E+FG V IV+G V+KL K++ K++ H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKEKFGKDVAFIVDG---VTKLSKIQYKSKTH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N E Y ++ + E E + +A +IL Q LD + + EI K
Sbjct: 193 SLHYLNPEQYYRIVNLMQSKRSEREGYIADAIQILR------QTLDSLHIDYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKSNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q+E S EF+ ++ D
Sbjct: 352 VKGEVEQTEANK-----------------KLNMFQEILELQDE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYMIH+E+G V A++NG +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T + + + W+ KT AR+KI +F + +
Sbjct: 452 VEMLTQTSATPS------RDWVNLVKTSRARNKIKRFFKAE 486
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
Length = 731
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 321/547 (58%), Gaps = 61/547 (11%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE ++E ++ SY++ + V++A LA +AH Q R SGEP+IIHPV+VA IL EL
Sbjct: 8 TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D E++AAG LHD VEDT+ T + + EFG V +V+G V+KLGK+K ++
Sbjct: 65 QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYLSKEAQ- 119
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA
Sbjct: 120 ---QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +K ELE+ + Y N + Y R+ L K+ E E + +M +++ L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLENVMAEMKSQ--LN 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + +I K YSIY+ ++ + NE+ + +R+ L + C
Sbjct: 231 EVEIDADIYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + GK V N+ +++W I E+Q E
Sbjct: 336 AEYGIAAHWAYK-----------------EGKNVDHQKQNVDQKLTWFREILEFQNE--- 375
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ + EF++++ DL V+VFTP G++ LP G+ +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF----LREQA 661
+V L +++EI+T SK +F + WL+ A++ A++KI +F LRE+
Sbjct: 436 KMVPLDTPLKTGDIIEILT-----SKQSFGPSRDWLKIAQSSQAKNKIKQFFKRHLREEN 490
Query: 662 ALSASEI 668
+ E+
Sbjct: 491 IVKGKEM 497
>gi|425737468|ref|ZP_18855741.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
gi|425482816|gb|EKU49972.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
Length = 729
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 310/524 (59%), Gaps = 58/524 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YLS + E V ++ +A+EAH+GQ R++G PFI+HP++VA IL E+ LD +I AG LH
Sbjct: 18 TYLSKEDYEYVLKSYHIAYEAHEGQFRKNGLPFIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TF+ ++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFDDVKGIFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++ Y + Y R+ +L K+ E E+ + +K I Q +D+M++ +I K
Sbjct: 190 IALRYIDNMQYF----RIVNLMKKKRSEREDYIQNAIKNIR--QEMDVMSISGDISGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + ++ + +R+I+ + + CY VLGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFEQIFDLLAVRVIV------------NSIKDCYAVLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS--REFVDTI 556
GK + + + ++SWL I E N TS EF++++
Sbjct: 348 ----------------EGKQITKEDDDYQKKLSWLKEIAE-----TDNTTSDAEEFIESL 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL
Sbjct: 387 KFDLQSDKVYAFTPESDVIELPYGAVPIDFAYNIHSEVGNKMIGAKVNGKIVPIDYVLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 447 GDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKSKIRSFFKKQ 485
>gi|225548080|ref|ZP_03769365.1| hypothetical protein RUMHYD_00059 [Blautia hydrogenotrophica DSM
10507]
gi|225040756|gb|EEG51002.1| RelA/SpoT family protein [Blautia hydrogenotrophica DSM 10507]
Length = 769
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 318/543 (58%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+E+L + P+ +L ++ +A +A AH+GQ R+SGEP+IIHP+ VA IL +
Sbjct: 31 SPEVLYEELLACVRKYHPSADLSMIEKAYRIAKNAHEGQFRKSGEPYIIHPLCVAIILAD 90
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT ++T E I++EFGA V +V+G V+KLG+L +
Sbjct: 91 LELDKETIVAGLLHDAVEDT-IMTTEEIQQEFGAEVALLVDG---VTKLGQLSYSADKVE 146
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 147 LQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQQEKARETMDIYAPIA 203
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ ++K EL++L+ Y + Y + ++ E E + + + + +ED
Sbjct: 204 MRLGISKVKVELDDLALKYLKPDVYYDLVEKINLKKSEREDYVNQVVGQVKRHMED---- 259
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K ++ K +SIY+ ++ +I+++ + +RI L +
Sbjct: 260 --AGIKAQVDGRIKHFFSIYRKMVNQDKTIDQIYDLFAVRI------------LVDTVKD 305
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 306 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPKGQPF--------EIQIRT 357
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G+ P G +++WL I EW
Sbjct: 358 FEMHKTAEYGIAAHWKYK---------ESSDGKKPIG-------IREEEKLNWLRQILEW 401
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q++ N +EF+ + DL V+ FTP+G++K LP G+T +D+AY +H+ +GN
Sbjct: 402 QKDMSDN---KEFLSLLKNDLDLFADNVYCFTPQGDVKTLPNGSTPIDFAYSVHSAVGNN 458
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV +V+ N + +EIIT S+++ + WL+ K+ A++KI ++
Sbjct: 459 MVGARVNGKLVPIEYVINNGDRIEIIT-----SQNSQGPSRDWLKIVKSTQAKNKINQWF 513
Query: 658 REQ 660
+++
Sbjct: 514 KQE 516
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 327/558 (58%), Gaps = 74/558 (13%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SP+ L+E+L +I P +++ ++ +A +A EAH Q+R+SGEP+IIHP+ VA IL +
Sbjct: 37 SPDVLYEELVHSIRRYHPSDDITMIEKAYHIAEEAHKDQRRKSGEPYIIHPLCVAIILAD 96
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAG+LHD VEDT +++ + ++ EFG V +V+G TK++++ K E
Sbjct: 97 LEMDKETIAAGILHDVVEDT-IMSLDELKAEFGEEVALLVDGVTKLTQISWSMDKME--- 152
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ A ET++++AP+A
Sbjct: 153 ---IQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKAKETMEIYAPIA 209
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK EL++LS Y E Y ++ +++ L K +A + +K I D+
Sbjct: 210 HRLGISKIKIELDDLSLRYLQPEIYYELAEKIS-LKK-------DARETFVKSIVDEVQD 261
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
L ++ + K +SIYK ++ +++++ + +RII+
Sbjct: 262 HLRSGGIEARVDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIV------------DSV 309
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QI
Sbjct: 310 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGNNGQPF--------EIQI 361
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM AE GIAAH+ + +G V + ++SWL I
Sbjct: 362 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGKEEE-----------------KLSWLRQIL 404
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ++ N +EF++ + DL V+ FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 405 EWQKDMSDN---KEFLNMVKGDLDLFSDSVYCFTPSGDVKNLPAGSTPIDFAYSIHSAVG 461
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG LV+ +V+ N + VE+IT S+++ + WL K+ A++KI +
Sbjct: 462 NKMVGARVNGKLVNIEYVIENGDQVEVIT-----SQNSRGPSRDWLNMVKSTQAKNKINQ 516
Query: 656 F----LREQAALSASEIT 669
+ L+E L E+
Sbjct: 517 WFKTELKEDNILRGKEMV 534
>gi|260589630|ref|ZP_05855543.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
gi|260539870|gb|EEX20439.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
Length = 769
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 318/554 (57%), Gaps = 86/554 (15%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L ++ P+ ++ ++ +A +A AH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 32 SPEVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILAD 91
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT V+T E I EEF A V +V+G V+KLG+L N +
Sbjct: 92 LELDKETIVAGLLHDVVEDT-VMTSEEIREEFNAEVELLVDG---VTKLGQL---NYSAD 144
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +MPPHKQ A ET+ ++AP+A
Sbjct: 145 KVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIA 204
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ ++K EL++LS Y E Y + KI +KK E F+
Sbjct: 205 QRLGISKVKIELDDLSLKYLKPEVYYDL-----------------VEKINLKKSERQAFI 247
Query: 365 DLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
D + ++ +I K +SIYK ++ +I+++ + +RII+
Sbjct: 248 DQIVGDVRAHIEKASINAQIDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------ 301
Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYE 468
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF
Sbjct: 302 ------DTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPF--- 352
Query: 469 SMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIAL 528
E+QIRT EM AE GIAAH+ + S GK +
Sbjct: 353 -----EIQIRTFEMHRTAEYGIAAHWKYKEV-------------SNNGKVSVTQSEE--E 392
Query: 529 RISWLNAIREWQEEFVGNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
++SWL I EWQ + N +EF + DL V+ FTP G++K LP G+T +D+
Sbjct: 393 KMSWLRQILEWQRDMSDN---KEFLSLLKSDLDLFSESVYCFTPAGDVKTLPNGSTPIDF 449
Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKT 646
AY +H+ +GNKMV A+VNG LV +V+ N + VEIIT S+++ + WL+ K+
Sbjct: 450 AYNVHSAVGNKMVGARVNGKLVPIEYVIKNGDRVEIIT-----SQNSKGPSRDWLKVVKS 504
Query: 647 RSARHKIMKFLREQ 660
A++KI ++ +++
Sbjct: 505 TQAKNKINQWFKQE 518
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 302/522 (57%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+SP E+ VRRA A +AH GQ R SGEP+I HP+ VA IL +L LD +I AGLLH
Sbjct: 19 SYMSPEEIAAVRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V + I + FGA V +V+G TK+ ++ K + E +A++LR+MF+
Sbjct: 79 DVVEDTSV-SDSTIVQTFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RV+I+KLADRLHNMRTL + P Q A ETL++FAPLA LG+ IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ +A +E E+ +E +L +K+ + + +K ++ K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RII++ + CY LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I E LE+QIRT EM AE GIAAH+
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
V G R + A +++W + EWQ++F ++EF++T+
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +VFVFTP+G++ LP G+ +D+AY IHT+IGN + AKVNG +V + L +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT SK ++ WL+ +T A+ KI ++ + +
Sbjct: 449 IVEIIT-----SKHSYGPSWDWLKIVQTSQAKSKIRQWFKRE 485
>gi|334341782|ref|YP_004546762.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
gi|334093136|gb|AEG61476.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
Length = 723
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/531 (38%), Positives = 312/531 (58%), Gaps = 57/531 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L+E + + Y ++ +R+A A AH GQKR SGE +I+HP+ ++ IL EL+LD
Sbjct: 4 LFELEQKVLVYNPSADIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAISIILAELQLDL 63
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHD VEDT + T IE FG V +V+G V+KLGKL+ +N+ ++ +
Sbjct: 64 QTVAAGLLHDVVEDTGI-TLTDIESNFGPEVANMVDG---VTKLGKLQFQNK----EERQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFLAM +++RVI++KLADRLHN+RTL KQ +A ETL FAPLA LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLMFFAPLAHRLGI 175
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y+IK ELE+LSF Y E Y ++K ++A + E+ ++E K L +K L + +
Sbjct: 176 YKIKWELEDLSFRYKEPEQYQRMKVQIAKSRVKREEHIQEVIKELGEK------LAAVNI 229
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
KTEI+ K YSIY+ +++ + + ++ + +R+ L S + CY L
Sbjct: 230 KTEIQGRPKNLYSIYQKMMEQQKELKDIFDVQAVRV------------LVSTVKDCYGAL 277
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+ H +W PIP KDYIA PK N YQSLHTT+I E +E+QIRT EM +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPQGEP---VEIQIRTWEMHKVAEYG 334
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + GR + +++WL + ++Q + +
Sbjct: 335 IAAHW-----------RYKEGGRG---------EGDFDKKLAWLRQMMDFQHD---ARDA 371
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
+EF++ + DL VFVFTP+G++ LP G T +D+AY IHT++G++ V AK+NG +V
Sbjct: 372 QEFMENLKIDLFSHSVFVFTPKGDVMELPAGTTPIDFAYRIHTDVGHRTVGAKINGRIVP 431
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++EIIT A + S + WL KT A+++I ++ +++
Sbjct: 432 LDYKLKNGNIIEIITSKASNGPS-----RDWLNIVKTSQAKNRIRQWFKKE 477
>gi|331083062|ref|ZP_08332179.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405064|gb|EGG84601.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 769
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 318/554 (57%), Gaps = 86/554 (15%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L ++ P+ ++ ++ +A +A AH GQ R+SGEP+IIHP+ VA IL +
Sbjct: 32 SPEVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILAD 91
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT V+T E I EEF A V +V+G V+KLG+L N +
Sbjct: 92 LELDKETIVAGLLHDVVEDT-VMTSEEIREEFNAEVELLVDG---VTKLGQL---NYSAD 144
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+V+A++LR+MFLAM +++RVI++KLADRLHNMRTL +MPPHKQ A ET+ ++AP+A
Sbjct: 145 KVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIA 204
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ ++K EL++LS Y E Y + KI +KK E F+
Sbjct: 205 QRLGISKVKIELDDLSLKYLKPEVYYDL-----------------VEKINLKKSERQAFI 247
Query: 365 DLM-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCS 413
D + ++ +I K +SIYK ++ +I+++ + +RII+
Sbjct: 248 DQIVGDVRAHIEKASINAQIDGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIV------ 301
Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYE 468
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF
Sbjct: 302 ------DTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPF--- 352
Query: 469 SMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIAL 528
E+QIRT EM AE GIAAH+ + S GK +
Sbjct: 353 -----EIQIRTFEMHRTAEYGIAAHWKYKEV-------------SNNGKVSVTQSEE--E 392
Query: 529 RISWLNAIREWQEEFVGNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDY 586
++SWL I EWQ + N +EF + DL V+ FTP G++K LP G+T +D+
Sbjct: 393 KMSWLRQILEWQRDMSDN---KEFLSLLKSDLDLFSESVYCFTPAGDVKTLPNGSTPIDF 449
Query: 587 AYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKT 646
AY +H+ +GNKMV A+VNG LV +V+ N + VEIIT S+++ + WL+ K+
Sbjct: 450 AYNVHSAVGNKMVGARVNGKLVPIEYVIKNGDRVEIIT-----SQNSKGPSRDWLKVVKS 504
Query: 647 RSARHKIMKFLREQ 660
A++KI ++ +++
Sbjct: 505 TQAKNKINQWFKQE 518
>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
Length = 790
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 327/572 (57%), Gaps = 69/572 (12%)
Query: 98 RSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLA 156
R L + K R + +++D F + PE ++ +L I+ PN ++ ++ +A +A
Sbjct: 10 REQLEQIEKKILRAQAARVIATDDFVD--PEVIYRELVARINRYHPNTDISMIEKAYGIA 67
Query: 157 FEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEF 216
+AH QKR+SGEP+IIHP+ VA IL +LELD E+I GLLHD VEDT V++ + + EF
Sbjct: 68 RQAHKDQKRKSGEPYIIHPLSVALILADLELDKETIVGGLLHDVVEDT-VMSLDDVRREF 126
Query: 217 GATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLH 276
+ +V+G V+KLG+L + +Q A++LR+MFLAM++++RV+++KLADRLH
Sbjct: 127 SDEIALLVDG---VTKLGQLSYDADKVEIQ---AENLRKMFLAMSKDIRVLLIKLADRLH 180
Query: 277 NMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 336
NMRTL M P KQ A ET++++APLA+ LG+ ++K EL++L+ + + Y + ++
Sbjct: 181 NMRTLKFMTPAKQKEKARETMEIYAPLAQRLGISKVKVELDDLALKFLEPDAYYDLLEQL 240
Query: 337 ADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINE 396
E + ++ ++ ++I D +K +I K +SIYK ++ ++++
Sbjct: 241 NQRESERSEYIQSLADLVTRQI------DAAGIKAKIYGRAKHLFSIYKKMVNQHKTLDQ 294
Query: 397 VNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQ 456
+ + +RII+ + CY LG++H +TPIP KDYIA PKPN YQ
Sbjct: 295 IYDLFAVRIIV------------DDLKDCYASLGIIHEHYTPIPGRFKDYIAMPKPNMYQ 342
Query: 457 SLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNG 511
SLHTT+I PF E+QIRT EM I+E GIAAH+ +
Sbjct: 343 SLHTTVIGPKGQPF--------EIQIRTWEMHRISEYGIAAHWKYK-------------- 380
Query: 512 RSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD--LLGSRVFVFT 569
S G T ++SWL I EWQ++ N +EFV I D L V+ FT
Sbjct: 381 ESGEGATTNQEEQ----KLSWLRQILEWQQDMTDN---KEFVSLIKSDLNLFSDTVYCFT 433
Query: 570 PRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALS 629
P G++KNLP G+T VD+AY IH+ +GN+MV AKVNG LV + + N + +EIIT
Sbjct: 434 PTGDVKNLPAGSTPVDFAYSIHSAVGNRMVGAKVNGKLVPIDYGIQNGDRIEIIT----- 488
Query: 630 SKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
S+++ + W++ K+ AR+KI ++ R Q+
Sbjct: 489 SQNSRGPSRDWVKLVKSSQARNKINQWFRAQS 520
>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 726
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 307/528 (58%), Gaps = 55/528 (10%)
Query: 133 DLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESI 192
+L + +SP ++LV +A A EAH GQ R SGE +I HP+EVA+IL ELE+D +I
Sbjct: 5 ELMEKLHKVSPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILSELEMDEATI 64
Query: 193 AAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADD 252
AA LHD VEDT T E IE EFG+ V +V+G V+KLG+++ K S ++++ ++
Sbjct: 65 AAAFLHDVVEDTKY-TIEDIEREFGSQVAILVDG---VTKLGRIEYK----SKEELQVEN 116
Query: 253 LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQI 312
LR+MFLAM +++RVI++KLADRLHNMRTL KQ IA ETL++FAPLA LG+++I
Sbjct: 117 LRKMFLAMAKDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETLEIFAPLANRLGIFRI 176
Query: 313 KSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTE 372
K ELE+LSF Y ++Y + +A E E ++ E L K++ + + +K +
Sbjct: 177 KWELEDLSFRYLKPQEYYDLSEGIALKRAEREVQINEVITQLSKRLTE------VGIKAD 230
Query: 373 IRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLV 432
I K YSIY+ ++ ++E+ + +R+I+ CY LG++
Sbjct: 231 ISGRPKHFYSIYRKMITQHRELSEIYDLTAVRVIV------------DSVNDCYGALGII 278
Query: 433 HGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAA 492
H +W P+P KDYIA PKPN YQSLHTTL+ E E+QIRT EM AE GIAA
Sbjct: 279 HTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAA 335
Query: 493 HYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREF 552
H+ + G +P G N ++SWL + EWQ + + + EF
Sbjct: 336 HWKYK------EGAGKPVG------------GNFEQKLSWLRQLLEWQHD---SRDAGEF 374
Query: 553 VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTH 612
++++ DL VFVFTP+G++ LP G+ +D+AY +HT++G++ V AK+N +V
Sbjct: 375 MESLRIDLFADTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCVGAKINSRIVPLET 434
Query: 613 VLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N ++VEI+T SK + + WL KT A+++I + +++
Sbjct: 435 KLTNGDIVEILT-----SKQSNGPSRDWLSFVKTSQAKNRIRGWFKKE 477
>gi|308272039|emb|CBX28647.1| GTP pyrophosphokinase [uncultured Desulfobacterium sp.]
Length = 713
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 304/516 (58%), Gaps = 58/516 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+++++ RA + + HDGQ R SGEP++ HP+EVA IL E++LD SIAAGLLHD +EDT
Sbjct: 19 DIDIIDRAYVYSARVHDGQVRLSGEPYLSHPLEVAGILAEMKLDVISIAAGLLHDVIEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ T E I+E FG V IV G TK+SK+ +++H + A+ +R+M LAM +++
Sbjct: 79 HA-TSEEIKEIFGENVLHIVSGVTKLSKIPF----SDSHVRE---AESIRKMLLAMADDI 130
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV+++KLADRLHNMRTL + K+ IA ETL ++ P+A LG+Y IK ELEN++FM
Sbjct: 131 RVVLIKLADRLHNMRTLQYQTEEKRKKIAQETLDIYTPIAARLGIYWIKQELENIAFMNI 190
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
++Y+ +++ V+ ++ EK +E + + K ++++ +K E+ K YSIY
Sbjct: 191 FPDEYSNIEKLVSKDKEDREKYVETVKEYIRKTMDENN------IKCEVLGRYKNYYSIY 244
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ ++ + +++ I RII+ P CY LGLVH +W PI K
Sbjct: 245 QKMVNQNLTFDQIYDIIAFRIILDSVPQ------------CYEALGLVHALWKPIAHKFK 292
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT+I + E R+E+QIRT EMD IA GIAAH+S +
Sbjct: 293 DYIGFPKPNMYQSLHTTVIGPIGE---RIEIQIRTWEMDGIARSGIAAHWSYK------- 342
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
GK + + NI+ + SW+ + + +E EF++ + DL
Sbjct: 343 ----------EGKRI---DENISKKFSWIQNLVDNHKE---TKDPVEFLENVRIDLYPDE 386
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G IK+LPKGAT VD+AY+IHTE+GN+ AKVNG +V ++ L +V+IIT
Sbjct: 387 VYVFTPKGAIKSLPKGATPVDFAYLIHTEVGNQCSGAKVNGRMVPLSYELQTGNIVDIIT 446
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
K WL+ KT AR +I ++++ Q
Sbjct: 447 ------SKGHNPSKDWLKFVKTVKARGRIRQWIKTQ 476
>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
Length = 769
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 303/521 (58%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 46 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 105
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 106 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 157
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 158 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 217
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 218 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 271
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 272 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 319
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 320 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 375
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + + +F++++
Sbjct: 376 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 416
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+GN V AKVNG +V +VL N +
Sbjct: 417 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 476
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 477 IVEMLT----ASGSAPSR--DWIKLVYTSRARNKIKRYFKQ 511
>gi|337285951|ref|YP_004625424.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfatator indicus DSM
15286]
gi|335358779|gb|AEH44460.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfatator indicus DSM
15286]
Length = 727
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 313/537 (58%), Gaps = 63/537 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + L SYL + LV +A + A +AH GQ RRSGEP++ HP+ VA IL ++LD
Sbjct: 8 RLSDILDQIQSYLPGADTRLVEKAYVFAAKAHAGQVRRSGEPYLAHPLSVAYILARMKLD 67
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAAGLLHDTVEDT+V T E I++ FG V IV+G V+K+ L +++ H
Sbjct: 68 LPTIAAGLLHDTVEDTDV-TIEDIKKHFGPVVAEIVDG---VTKIAHLSARSKVHK---- 119
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM E++RVI+VKLADRLHNM+TL MP HK+ IA ETL ++APLA LG
Sbjct: 120 QAENFRKMLLAMAEDLRVILVKLADRLHNMKTLEFMPDHKRKRIAQETLDIYAPLASRLG 179
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +K ELE+LSFMY E+Y ++ V + + ++E K++ +K++++
Sbjct: 180 IDWLKQELEDLSFMYLYPEEYKTLREEVEKVVAARQDFIDEIKKVIKEKLDEE------G 233
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINE---VNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ ++ K YSI++ + ++ +I++ + I LR+I+K + C
Sbjct: 234 IEAKVLGRRKHLYSIFRKLQRNNLAIDQLYLIYDIIGLRVIVKK------------VKEC 281
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG++H +W PIP KDYI PK N YQSLHTT+I ++E+QIRTEEMD +
Sbjct: 282 YEVLGIIHSLWKPIPGRFKDYINLPKANMYQSLHTTVIG---PGGRQMEIQIRTEEMDRV 338
Query: 486 AERGIAAH--YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
A GIAAH Y + + G + ++ WL + E Q+E
Sbjct: 339 ANEGIAAHFLYKEQKIINAGTGKNK--------------------QLEWLERLVELQKEL 378
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
R+F++++ DL V+VFTP G+IK LP G+T +D+AY IHTE+G+ AKV
Sbjct: 379 ---KNPRDFIESLRMDLFPDEVYVFTPEGDIKVLPVGSTPIDFAYAIHTEVGHHCAMAKV 435
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG LV + L ++VEI+T S + + WL+ KT A+ +I ++L+++
Sbjct: 436 NGRLVPLDYELQTGDIVEIVT------TSHQKPSRDWLKFVKTSRAKSRIKQWLKQE 486
>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
OL]
gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
OL]
Length = 726
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/541 (38%), Positives = 318/541 (58%), Gaps = 72/541 (13%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
+RL E + Y+S ++ L+++A A + H+GQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7 DRLNELIEKVKKYVSEEDVNLIKKAFEFAQKHHEGQARSSGEPYIVHPLEVALILADLEL 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHD VEDT+ + E IE EFG + +V+G V+KLGKL E S +
Sbjct: 67 DIASIVAGLLHDVVEDTSA-SLEDIEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET++++APLA L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIEIYAPLAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y + E Y + ++A E E+ ++ ++ +K+++
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE------- 231
Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
E+ + P YSIY+ + + ++ E+ + +RII+ + +
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M AE GIAAH+ + GR + + + + +WL + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------VKSTDEDEKFAWLRELLEW 370
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI + ++
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAWFKK 482
Query: 660 Q 660
+
Sbjct: 483 E 483
>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
Length = 726
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 318/544 (58%), Gaps = 72/544 (13%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D ++L E + Y S ++ L+++A A + HDGQ R SGEP+I+HP+EVA IL +
Sbjct: 4 DLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQSRNSGEPYIVHPLEVALILAD 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD SI AGLLHD VEDT+ + E +E EFG + +V+G V+KLGKL E S
Sbjct: 64 LELDIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTS 115
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA
Sbjct: 116 KLERQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK ELE+LS Y + E Y + ++A E E+ +++ ++ +K+++
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE---- 231
Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
E+ + P YSIY+ + + ++ E+ + +RII+ +
Sbjct: 232 ----ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NS 275
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
+ CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQ
Sbjct: 276 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 327
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT +M AE GIAAH+ + GR + + + + +WL +
Sbjct: 328 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 367
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
EWQ+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 368 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 424
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI +
Sbjct: 425 KMAGAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAW 479
Query: 657 LREQ 660
+++
Sbjct: 480 FKKE 483
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 209/519 (40%), Positives = 300/519 (57%), Gaps = 69/519 (13%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V +A A EAH QKR SGEP+I HPVEVA IL E+ LD +I AGLLHD +EDT
Sbjct: 19 KIVEKAYYFADEAHKKQKRESGEPYISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQF 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
++E I+ EF V +VEG V+KLGK++CK + ++ +AD++R+M LAM +++RV
Sbjct: 79 -SYEDIKREFSVEVANLVEG---VTKLGKIECKTK----EEQQADNVRKMLLAMADDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL +MP KQ A ET ++APLA LGM +IK ELE+L+F Y N
Sbjct: 131 ILIKLADRLHNMRTLKYMPVKKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINQ 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R++A+ E EK ++E ++ +++D+ L + ++I K YSIY+
Sbjct: 191 NEYYFIVRKIAEKRVEREKYIDE----IISQLKDN--LKKSGIDSDIEGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++K +I+++ + +RI L + + CY LG+ H I+ P+P KDY
Sbjct: 245 MVKKNKTIDQIFDLTAVRI------------LVNTVKDCYAALGIAHTIYKPMPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLH+T+I PF E+QIRT EM AE GIAAH+ + V
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHWKYKEGV- 343
Query: 502 GLVGHARPNGRSPRGKTVCLNNAN-IALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ AN I +++WL I EWQ E + EF++ DL
Sbjct: 344 --------------------DTANDIDKKLTWLREILEWQRE---TSDAEEFMERFKIDL 380
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP G++ NLP AT +D+AY IHTEIGN + AKV+G +V + L E+V
Sbjct: 381 FSDEVFVFTPNGKVINLPYEATPIDFAYKIHTEIGNSCIGAKVSGKMVPLDYHLKTGEIV 440
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
E++ + S WL AK+ A+ KI + ++
Sbjct: 441 EVLVSSTPKGPSI-----DWLNMAKSNQAKSKIRSWFKK 474
>gi|293571366|ref|ZP_06682397.1| GTP pyrophosphokinase [Enterococcus faecium E980]
gi|431738631|ref|ZP_19527574.1| RelA/SpoT family protein [Enterococcus faecium E1972]
gi|291608582|gb|EFF37873.1| GTP pyrophosphokinase [Enterococcus faecium E980]
gi|430597359|gb|ELB35162.1| RelA/SpoT family protein [Enterococcus faecium E1972]
Length = 786
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 67 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 395 -YKEGKSEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 497 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 534
>gi|335041192|ref|ZP_08534308.1| (p)ppGpp synthetase I, SpoT/RelA [Caldalkalibacillus thermarum
TA2.A1]
gi|334178990|gb|EGL81639.1| (p)ppGpp synthetase I, SpoT/RelA [Caldalkalibacillus thermarum
TA2.A1]
Length = 721
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 325/540 (60%), Gaps = 59/540 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YLSP++++ + RA A +AH+GQ R+SGE +I HPVEVA IL L+LD +IAA LLH
Sbjct: 12 TYLSPDDVQFIERAYQFARDAHEGQYRQSGEEYINHPVEVAGILANLQLDAVTIAAALLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT T E +EE+FG V +V G V+KL ++K K++ ++ +A++ R+MF+
Sbjct: 72 DVIEDTTA-TVEELEEQFGEEVALLVNG---VTKLKRIKYKSQ----EEQQAENHRRMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +MP K+ A ETL++FAPLA LG+ IK ELE+
Sbjct: 124 AMAKDLRVILIKLADRLHNMRTLKYMPEEKRRKKAEETLEIFAPLAHRLGISTIKWELED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+S Y N + Y ++ + E E+ +++ +I+ +KIE+ + +K EI K
Sbjct: 184 ISLRYLNPQQYYRIVHLMKQKRAEREQHIQKVIEIIRQKIEE------VGIKAEISGRPK 237
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + + + NE+ + +RII++ + CY VLG++H W P
Sbjct: 238 HIYSIYRKMQEQKKAFNEIYDLMAIRIIVE------------TVRDCYAVLGIIHTCWKP 285
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT++ + + LEVQIRT EM AE GIAAH++ +
Sbjct: 286 LPGRFKDYIAMPKPNMYQSLHTTVMSYKGQP---LEVQIRTHEMHRTAEYGIAAHWAYK- 341
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNAN-IALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GK + + + + +++W + E Q++ +REF++++
Sbjct: 342 ----------------EGKNLKETSPSALDEKLTWFREVLESQQD---AQDAREFMESLK 382
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL VFVFTP+G++ LP G+ +D+AY IHTE+GN+ V AKVNG +V H L
Sbjct: 383 MDLFSDVVFVFTPKGDVIELPAGSVPLDFAYRIHTEVGNRCVGAKVNGKIVPLDHELKTG 442
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTV 673
++VEI+T SK ++ + WL+ AK+ +A+ KI +F RE++ E+ + +
Sbjct: 443 DIVEILT-----SKHSYGPSRDWLKIAKSSTAKSKIKQFFKKEKREESIAKGKELVENEI 497
>gi|295692846|ref|YP_003601456.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
gi|295030952|emb|CBL50431.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
Length = 746
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 316/566 (55%), Gaps = 64/566 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W++ KT AR+KI ++ R Q + + + D +
Sbjct: 450 IEIMTQTNAAPSRD-------WVDMVKTSRARNKIRRYFRSQDREDSIQHGEQLIADMLR 502
Query: 679 DSGEESEVEDLSDGSKQDKPLWEKIL 704
D EDLS + EK+L
Sbjct: 503 D-------EDLSPKEFMARDRIEKLL 521
>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
Length = 682
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 211/535 (39%), Positives = 308/535 (57%), Gaps = 58/535 (10%)
Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+ E L+E+L+ +S YL ++L+ A A E H GQ R SGE +IIHP+ VA IL
Sbjct: 2 TKESLFEELKNKVSPYLDGEGMKLLEDAYKFALEKHSGQTRESGEEYIIHPLNVAIILAN 61
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L+LD E+ AA LLHD +EDTNV T E I+ +FG TV +V G TK+ + + S
Sbjct: 62 LKLDAETYAAALLHDVIEDTNV-TLEDIKSQFGETVAFLVNGVTKLRGIKSV-------S 113
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++ + LR+M LAM ++VRV+++KLADRLHNMRTL+++P +Q IA ET+ ++ PLA
Sbjct: 114 TEEAHLESLRKMLLAMAQDVRVVLIKLADRLHNMRTLNYLPSERQKEIAKETMDIYVPLA 173
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+Y +K ELE+LSF Y E Y ++ R+VA +E E + E LM+++ + L
Sbjct: 174 HRLGIYTMKWELEDLSFRYLEPEKYYELARKVAKKREEREAYVNE----LMEELRN--LL 227
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ + K Y IY+ +++ E+ I LRII+ P
Sbjct: 228 KEHGISGIVEGRPKNLYGIYRKMIRDGKQFEEIYDIIALRIIVDDIPT------------ 275
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG+V+ + +P +KDYIA PKPN Y+SLHTT+I +S E+QIRT EM
Sbjct: 276 CYQVLGIVNNYYKLVPGRIKDYIAMPKPNFYRSLHTTVIT---KSGEPFEIQIRTREMHE 332
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
I E GIAAH+ + GK++ + N +I+WL + EWQ+E
Sbjct: 333 IDEMGIAAHW-----------------KYKEGKSL---DKNYEAKIAWLRQMLEWQKEV- 371
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+S+EFV+ + DL V VFTP+G++ LP+G+T VD+A+ +HT+IG + + AKVN
Sbjct: 372 --RSSKEFVERVKVDLFSDEVLVFTPKGDVIELPQGSTPVDFAFRVHTDIGYRCIGAKVN 429
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
G+LV + L + VEIIT SK+A WL+ +T SA+ KI + R+
Sbjct: 430 GSLVPLNYKLQTGDRVEIIT-----SKTATGPKLDWLQFVRTASAKSKIKAYFRK 479
>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
thermoacetica ATCC 39073]
Length = 717
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 310/535 (57%), Gaps = 68/535 (12%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
++L I P+ +L+LVR A LA AH GQKRRSGE +I HP++VA IL EL+LD
Sbjct: 4 QELEQQIRNYQPDADLKLVRDAYTLAATAHRGQKRRSGEDYITHPLQVAAILAELQLDVV 63
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+IAA LLHD VEDT V + + I+E FG V +V+G TK+S+L + K K E +A
Sbjct: 64 TIAAALLHDVVEDTPV-SLDTIKELFGEEVALLVDGVTKLSRL-EYKTKEEQ------QA 115
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+ LR+MFL M +++RVI++KLADRLHNMRTL + PP KQ IA ETL++FAPLA LG++
Sbjct: 116 ETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPPEKQQEIARETLEIFAPLAHRLGIF 175
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
++K ELE+ S Y E Y ++ + +E E+ + + IL +K LD +K
Sbjct: 176 RLKWELEDQSLRYLEPERYYELVNSINMKRREREEYIRQVVDILRQK------LDEAGIK 229
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
+I+ K YSIY ++K ++E+ + +R+I+ + CY VLG
Sbjct: 230 ADIQGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIV------------DTVKECYAVLG 277
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLI 485
+VH IW PIP KDY+A PKPN YQSLHTT+I PF E+QIRT EM
Sbjct: 278 VVHAIWKPIPGRFKDYVAMPKPNMYQSLHTTVIGPNGDPF--------EIQIRTWEMHRT 329
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + G S R +++WL + +WQ E
Sbjct: 330 AEYGIAAHWR----------YKEGGGTSDR---------EFEQKLTWLRQLLDWQREM-- 368
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
REF++++ DL RV+VFTP+G++ LP G+ +D+AY +HT++G++ A+VNG
Sbjct: 369 -RDPREFMESLRIDLFSDRVYVFTPKGDVVELPAGSVPIDFAYRVHTDVGHRCTGARVNG 427
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V + L ++VE++T S+ + + WL KT A+++I ++ +++
Sbjct: 428 RIVPLDYQLKTGDIVEVLTTKG--SRPS----RDWLHIVKTSQAKNRIRQWFKKE 476
>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
Length = 741
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 303/521 (58%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + + +F++++
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREIFELQDE---SSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKIVYTSRARNKIKRYFKQ 483
>gi|210616270|ref|ZP_03291020.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
gi|210149868|gb|EEA80877.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
Length = 781
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 321/538 (59%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
P+ L+E L I P+ ++ +V +A +A+ AH+GQ R+SGE +IIHP+ V IL +
Sbjct: 44 DPKMLYEALIKRIRKYHPSTDISMVEKAFNIAYHAHEGQFRKSGEAYIIHPLWVGIILAD 103
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AG+LHD VEDT V+T + I E FG+ V +V+G V+KLG+L +
Sbjct: 104 LELDKETIVAGILHDVVEDT-VMTEQEITEIFGSEVALLVDG---VTKLGQLSYSADKLE 159
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVI++KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 160 VQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFMRPEKQIEKARETMDIYAPIA 216
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y+ E + + +++ E E+ +++ + E + +
Sbjct: 217 QRLGISRIKTELDDLSLKYSQPEVFYDLVQQINARKTEREEFVQQIVE------EVSEHM 270
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K E++ K +SIYK ++ +++++ + +RII++ +
Sbjct: 271 KNAKIKAEVKGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVE------------SVKD 318
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ + + E+QIRTEEM
Sbjct: 319 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEEMHK 375
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + S GK A ++SWL I EWQ+
Sbjct: 376 TAEYGIAAHWKYK--------------ESNDGKKSVA--AQEEEKLSWLRQILEWQQ--- 416
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
+ +REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNKMV A+
Sbjct: 417 -DTDNREFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNKMVGAR 475
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + + N + +EI+T S+++ + WL K+ AR+KI ++ +++
Sbjct: 476 VNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQARNKINQWFKKE 528
>gi|257896966|ref|ZP_05676619.1| RelA/SpoT protein [Enterococcus faecium Com12]
gi|257833531|gb|EEV59952.1| RelA/SpoT protein [Enterococcus faecium Com12]
Length = 737
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|358466796|ref|ZP_09176585.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068679|gb|EHI78668.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 725
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/546 (37%), Positives = 323/546 (59%), Gaps = 63/546 (11%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
E+L E + N+L+L AL A E+H GQ R+SG+ +I+HPVEVA+IL ++++
Sbjct: 6 EQLLEKAKANHLNYDFNKLKL---ALAFAEESHKGQYRKSGDDYIVHPVEVAKILMDMKM 62
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D +++ AGLLHD VEDT ++ I+ FG TV +V+G TK+ L KN+
Sbjct: 63 DTDTVVAGLLHDVVEDT-LIPIADIKYNFGDTVAILVDGVTKLKALPN-GTKNQ------ 114
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
A+++R+M LAM E +RVI++KLADRLHNMRTL M P KQ +I+ ETL ++APLA L
Sbjct: 115 --AENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQTISKETLDIYAPLAHRL 172
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
GM +IKSELE+L+F Y + E+Y ++K+ V + +E + +E + + + + D +
Sbjct: 173 GMAKIKSELEDLAFSYLHHEEYLEIKKLVENTKEERKDYIENFIRTMKRTLVD------L 226
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K E++ K YSIY+ + + +++ + +R+I++ K CYH
Sbjct: 227 GLKAEVKGRFKHFYSIYRKMYQKGKEFDDIYDLMGVRVIVEDKAA------------CYH 274
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG+VH +TP+P KDYIA PK N YQS+HTT++ L + +E+QIRT++MD IAE
Sbjct: 275 VLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTKDMDDIAE 331
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH++ + N ++ + + WL I E+Q E +
Sbjct: 332 EGIAAHWN-----------YKENKKTSKDDNIY----------GWLRHIIEFQNE---SD 367
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
++ +F++ +T D+ +F F+P+G+I LP GAT +D+A+M+HT++G K V AKVN +
Sbjct: 368 STEDFIEGVTGDIDRGTIFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNNRM 427
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
V+ H L + + VEIIT SK++ WL+ T A+ KI KFL+++ S+
Sbjct: 428 VTIDHKLKSGDKVEIIT-----SKNSKGPSIDWLDIVITHGAKGKIRKFLKDENKEIVSK 482
Query: 668 ITADTV 673
+ D++
Sbjct: 483 LGKDSL 488
>gi|270307456|ref|YP_003329514.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
gi|270153348|gb|ACZ61186.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
Length = 728
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 311/544 (57%), Gaps = 66/544 (12%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ DL+ S YL P +L + A A AH GQ R+SGEPFI HP+ VA L +L+LD
Sbjct: 3 FADLKEKASKYLPPEKLVFLEEAYNYAAAAHTGQMRKSGEPFIEHPLNVALTLADLQLDV 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG------KLKCKNENH 243
+++A LLHD ED N+ + E+I+++FG V ++V+G TK+SKL + N
Sbjct: 63 STLSAALLHDVPEDANI-SLEQIDKKFGPDVAKLVDGVTKLSKLALGPAIEDARRPGGNA 121
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S++ +A++LR+M +AM+E++RV+ +KLADR HNMRTL + K+ SIA ET++++APL
Sbjct: 122 SLR--QAENLRKMLVAMSEDLRVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPL 179
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG++++K +LE+L+F Y + Y +V V + + +E + IL + E +
Sbjct: 180 AHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRKNYIEHVSAILQSEFEKN-- 237
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLK--SRG-SINEVNQIAQLRIIIKPKPCSGVGPLCS 420
+K E+ K YSIY+ + K S+G ++ + LR+++ P
Sbjct: 238 ----GLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVNDIPD-------- 285
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
CYH +G+VH +W PIP A DYIA PKPNGYQSLHT ++ LEVQ+RT
Sbjct: 286 ----CYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSL---GTTPLEVQVRTY 338
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
+M IAE G+AAH+ R KT + N RI WL + EW
Sbjct: 339 QMHHIAEYGVAAHW--------------------RYKTAGKEDVNFEDRIGWLRQLIEWH 378
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
+ G + EF++++ D+ +VFVFTP+GEIK+L KGAT +D+AY IHTE+GN+ +
Sbjct: 379 RDMRG---AEEFLESVKTDIFNDQVFVFTPKGEIKDLAKGATPIDFAYRIHTELGNRCIG 435
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKF 656
AK NG LV + L N EVVEI+T +K + WL + KT AR KI+ +
Sbjct: 436 AKANGRLVPLDYQLKNGEVVEIVT-----TKKDRGPSRDWLNANMGYIKTHHAREKILAW 490
Query: 657 LREQ 660
++Q
Sbjct: 491 FKKQ 494
>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 740
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 214/532 (40%), Positives = 301/532 (56%), Gaps = 56/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L T +YL+ E L+ +A + + AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3 RINEILDKTSAYLNEQEQALITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SIA+GLLHDTVEDT T + +EE FG V IV+G TK+S L + K E
Sbjct: 63 AASIASGLLHDTVEDTKA-TVDELEELFGEEVADIVDGVTKIS-LIPFETKEE------A 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM E++RV++VKLADRLHNMRTL PHKQ+ IA ET+ ++APLA LG
Sbjct: 115 QAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQAIIAQETMDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+++IK+ELE+ SF Y + YA++ VA + E +E L + L
Sbjct: 175 LHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHL------NDLLGPNN 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K I K +S++ + +I++V+ + R+I++ + CYHV
Sbjct: 229 IKARIVGRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVE------------TIRECYHV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH +W P+P KDYI+ PK N YQSLHTT++ E R+E+QIRTEEM +AE
Sbjct: 277 LGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGE---RIEIQIRTEEMHRLAEE 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH+ + R G+ N R WL I +WQ E
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFQWLRQIMDWQREL---KD 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV + DL V+VFTP+G++K LP+GAT VD A++IHT +G AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGDVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGKLV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N + VEIIT + ++ WL+ KT AR ++ F+R +
Sbjct: 433 PLETPLKNGDTVEIIT------DKNRRPNRDWLKFVKTAKARTRVKHFIRTE 478
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 302/522 (57%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+SP ++ VRRA A +AH GQ R SGEP+I HP+ VA IL +L LD +I AGLLH
Sbjct: 19 SYMSPEDIAAVRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V + I + FGA V +V+G TK+ ++ K + E +A++LR+MF+
Sbjct: 79 DVVEDTSV-SDSAIVQTFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RV+I+KLADRLHNMRTL + P Q A ETL++FAPLA LG+ IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ +A +E E+ +E +L +K+ + + +K ++ K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RII++ + CY LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I E LE+QIRT EM AE GIAAH+
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
V G R + A +++W + EWQ++F ++EF++T+
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +VFVFTP+G++ LP G+ +D+AY IHT+IGN + AKVNG +V + L +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT SK ++ WL+ +T A+ KI ++ + +
Sbjct: 449 IVEIIT-----SKHSYGPSWDWLKIVQTSQAKSKIRQWFKRE 485
>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 718
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 316/524 (60%), Gaps = 66/524 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S N++ L+ +A A +AH GQ R SGEP+I+HPVEVA IL +LELD +IA+GLLHD +
Sbjct: 15 SENDINLILKAYDYAVKAHKGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVI 74
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT++ T+E I+ EFG + +V+G V+KLG ++ K++ +A+++R+M +AM
Sbjct: 75 EDTSI-TYEDIKNEFGQEIADLVDG---VTKLGMIEYKSKVEQ----QAENMRKMLIAMA 126
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL + KQ A ETL+++AP+A LGM IK ELE+LS
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + ++Y + +VA KE E+ ++E L++K+++ L+ + +K ++ K Y
Sbjct: 187 RYLHPDEYYSLVEKVAKKRKEREESIKE----LIEKLKEK--LNEIGIKADVDGRPKHFY 240
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIYK + + + ++ + +R+I+ + + CY LG+VH +W P+P
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGVVHTLWKPMPG 288
Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
KDYIA PKPN YQSLHTT+I PF E+QIRT +M AE GIAAH+
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+ ++SWL + EWQ E ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V+VFTP+G++ +LP G+T +D+AY IHTEIG+++ AKVNG +V + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T ++ + + WL+ K+ A++KI ++ +++
Sbjct: 438 GDIVEILT----TTNADRGPSRDWLQIVKSSQAKNKIRQWFKKE 477
>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
Length = 736
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 309/536 (57%), Gaps = 56/536 (10%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D + E ++ SY + +V++A LA +AH GQ R SGE +I HP+ VA+IL E
Sbjct: 4 DGQNTIKEIIKKIQSYQIDAPIAIVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILSE 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L++D +I+A LLHD VEDT + E +E+ FG V +V+G TK+S++ E S
Sbjct: 64 LQIDALTISASLLHDVVEDT-AFSLEELEKLFGKEVAMLVDGVTKLSRI-------EYKS 115
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++ + ++ R+MFLAM +++RV+++KLADRLHNMRTL HMP HKQ I+ ET ++FAPLA
Sbjct: 116 KEEQQLENFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +K ELE+L+F Y E Y ++ +V +E E+ + EA KIL +++D
Sbjct: 176 HRLGISSVKWELEDLAFRYLEPEKYYELVEKVKQKRREREQLINEAIKILSARLDD---- 231
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ +K +I+ K YSIYK +LK ++E+ ++ +RI L +
Sbjct: 232 --VEIKADIQGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRI------------LVDTVKD 277
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG+VH +W P+P KDYIA PK N YQSLHTT+I + LE+QIRT +M
Sbjct: 278 CYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQP---LEIQIRTMDMHR 334
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+E GIAAH+ + G N + +++WL + EWQ++
Sbjct: 335 TSEYGIAAHWRYKEGSKG-------------------ANKDFDEKLTWLRQLSEWQQDL- 374
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
EF++T+ D+ VFVFTP+G++ +LP G+T +D+AY IHT +GN+ V A++N
Sbjct: 375 --RDPHEFMETVKMDIFSDEVFVFTPKGDVIDLPAGSTPIDFAYRIHTGVGNRCVGARIN 432
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
G ++ L N ++VEI+T SK+ WL + ++KI ++ +++
Sbjct: 433 GKMIPLETKLTNGDIVEIVT-----SKTGNGPSWDWLNIVGSSDTKNKIRQWFKKE 483
>gi|306832661|ref|ZP_07465800.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
gi|304425269|gb|EFM28396.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
Length = 739
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 324/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYVTKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y + ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLDEIEFYKISHMMKEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N A+ ++W+ + E Q+ N + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 501
Query: 677 VADSG 681
+ G
Sbjct: 502 FQEQG 506
>gi|257899574|ref|ZP_05679227.1| RelA/SpoT protein [Enterococcus faecium Com15]
gi|257837486|gb|EEV62560.1| RelA/SpoT protein [Enterococcus faecium Com15]
Length = 737
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|431381389|ref|ZP_19510991.1| RelA/SpoT family protein [Enterococcus faecium E1627]
gi|430581751|gb|ELB20189.1| RelA/SpoT family protein [Enterococcus faecium E1627]
Length = 737
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|425054812|ref|ZP_18458314.1| GTP diphosphokinase [Enterococcus faecium 505]
gi|430840370|ref|ZP_19458295.1| RelA/SpoT family protein [Enterococcus faecium E1007]
gi|431064204|ref|ZP_19493551.1| RelA/SpoT family protein [Enterococcus faecium E1604]
gi|431124683|ref|ZP_19498679.1| RelA/SpoT family protein [Enterococcus faecium E1613]
gi|431593365|ref|ZP_19521694.1| RelA/SpoT family protein [Enterococcus faecium E1861]
gi|431741443|ref|ZP_19530348.1| RelA/SpoT family protein [Enterococcus faecium E2039]
gi|403035121|gb|EJY46526.1| GTP diphosphokinase [Enterococcus faecium 505]
gi|430495135|gb|ELA71342.1| RelA/SpoT family protein [Enterococcus faecium E1007]
gi|430566968|gb|ELB06056.1| RelA/SpoT family protein [Enterococcus faecium E1613]
gi|430568845|gb|ELB07875.1| RelA/SpoT family protein [Enterococcus faecium E1604]
gi|430591242|gb|ELB29280.1| RelA/SpoT family protein [Enterococcus faecium E1861]
gi|430601621|gb|ELB39215.1| RelA/SpoT family protein [Enterococcus faecium E2039]
Length = 786
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 67 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 395 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 497 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 534
>gi|403515171|ref|YP_006655991.1| PpGpp synthetase [Lactobacillus helveticus R0052]
gi|403080609|gb|AFR22187.1| PpGpp synthetase [Lactobacillus helveticus R0052]
Length = 746
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/565 (38%), Positives = 316/565 (55%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD ++IAAG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++GN V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T +++ + W + KT AR+KI ++ R Q + E + + + +
Sbjct: 450 IEIMT------QASAAPSRDWADMVKTSRARNKIRRYFRSQDREESIERGKQMIANMIRE 503
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
E L+ DK EKIL
Sbjct: 504 -------EALAPKDFMDKDHIEKIL 521
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/531 (41%), Positives = 313/531 (58%), Gaps = 65/531 (12%)
Query: 132 EDLRPTISYLSPNELEL-VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
+DL I +PN E +R A LA H GQKR SGE +IIHP+ VA IL ++ +D
Sbjct: 4 DDLIEKIKTYNPNVDEAEIRSAYELAKVNHQGQKRNSGEDYIIHPLHVAMILADMNMDSA 63
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+I AGLLHDT+EDT+V T+E IE++FG + +V+G TK+ KL K K E A
Sbjct: 64 TIIAGLLHDTIEDTSV-TYEDIEKKFGKEIAELVDGVTKLKKLN-YKSKAEKQ------A 115
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+++R+M LAM +++RVIIVKLADRLHNMRTL +M K+ ATETL+++AP+A LGM
Sbjct: 116 ENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTEAKKIEKATETLEIYAPIADRLGMS 175
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL--MT 368
++K ELE+LS Y + ++Y K + D+ + KE EE L+ I D ++L +
Sbjct: 176 RVKWELEDLSLRYLDPDEYYK----LVDMVNKRRKEREE----LINSIIDTLKVNLERVG 227
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSI-NEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K EI K YSIYK +K +G + +E+ ++ +RI L + + CY
Sbjct: 228 IKCEINGRPKNFYSIYKK-MKVKGKVFDEIYDLSAVRI------------LTNDIKDCYG 274
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG+VH +W PIP KDYIA PKPN YQSLHTT+I E+ EVQIRT +M AE
Sbjct: 275 ALGVVHTLWKPIPGRFKDYIAMPKPNNYQSLHTTVIDNNGET---FEVQIRTYQMHQTAE 331
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + TG + KT + ++WL + EWQ++
Sbjct: 332 YGIAAHWK---YKTG------------QTKTTSFDE-----NLTWLRQLMEWQKDL---N 368
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+F+DT+ D VFVF+P+G++ NLP+G+T +D+AY IHT++GN V AKVNG +
Sbjct: 369 DPNDFMDTLKVDFFADEVFVFSPKGDVINLPEGSTPIDFAYRIHTQVGNTCVGAKVNGRI 428
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V ++ L++ +V+IIT N+ S S WL K+ A+ KI ++ +
Sbjct: 429 VPLSYKLSSGNIVDIIT-NSNSGPSL-----DWLNIVKSNQAKKKISQYFK 473
>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 762
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 315/538 (58%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L + L I + P +++ ++ +A LA +AH+ QKR+SGEP+IIHP+ VA IL E
Sbjct: 25 SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT V+T+ + + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-VITYNELADMFGIDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A ++ ++ ++E ++KK Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKFS--QHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SATGMKYTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG H I+ PIP KDYIA PK N YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + +G +G +++WL I EWQ +
Sbjct: 357 TAEFGIAAHWKYK---------ESGSGSEAKGAEDA--------KMNWLRQILEWQRDMS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDFDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + L + + VEIIT S+++ + WL K+ AR KI ++ + +
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQARSKIQQWFKNE 509
>gi|431702948|ref|ZP_19525071.1| RelA/SpoT family protein [Enterococcus faecium E1904]
gi|430597031|gb|ELB34842.1| RelA/SpoT family protein [Enterococcus faecium E1904]
Length = 737
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDTSEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|69247932|ref|ZP_00604548.1| RelA/SpoT protein [Enterococcus faecium DO]
gi|257880296|ref|ZP_05659949.1| RelA/SpoT protein [Enterococcus faecium 1,230,933]
gi|257882151|ref|ZP_05661804.1| RelA/SpoT protein [Enterococcus faecium 1,231,502]
gi|257885343|ref|ZP_05664996.1| RelA/SpoT protein [Enterococcus faecium 1,231,501]
gi|257890955|ref|ZP_05670608.1| RelA/SpoT protein [Enterococcus faecium 1,231,410]
gi|257894210|ref|ZP_05673863.1| RelA/SpoT protein [Enterococcus faecium 1,231,408]
gi|260562400|ref|ZP_05832914.1| RelA/SpoT protein [Enterococcus faecium C68]
gi|261209225|ref|ZP_05923617.1| RelA/SpoT protein [Enterococcus faecium TC 6]
gi|289566141|ref|ZP_06446576.1| GTP pyrophosphokinase [Enterococcus faecium D344SRF]
gi|293556306|ref|ZP_06674891.1| GTP pyrophosphokinase [Enterococcus faecium E1039]
gi|293560712|ref|ZP_06677191.1| GTP pyrophosphokinase [Enterococcus faecium E1162]
gi|293566146|ref|ZP_06678549.1| GTP pyrophosphokinase [Enterococcus faecium E1071]
gi|294614195|ref|ZP_06694115.1| GTP pyrophosphokinase [Enterococcus faecium E1636]
gi|294622232|ref|ZP_06701292.1| GTP pyrophosphokinase [Enterococcus faecium U0317]
gi|314940914|ref|ZP_07847820.1| GTP diphosphokinase [Enterococcus faecium TX0133C]
gi|314948065|ref|ZP_07851467.1| GTP diphosphokinase [Enterococcus faecium TX0082]
gi|383329817|ref|YP_005355701.1| GTP diphosphokinase [Enterococcus faecium Aus0004]
gi|389869622|ref|YP_006377045.1| GTP diphosphokinase [Enterococcus faecium DO]
gi|406579528|ref|ZP_11054758.1| GTP diphosphokinase [Enterococcus sp. GMD4E]
gi|406581760|ref|ZP_11056896.1| GTP diphosphokinase [Enterococcus sp. GMD3E]
gi|406583837|ref|ZP_11058876.1| GTP diphosphokinase [Enterococcus sp. GMD2E]
gi|406590128|ref|ZP_11064525.1| GTP diphosphokinase [Enterococcus sp. GMD1E]
gi|410936653|ref|ZP_11368517.1| GTP diphosphokinase [Enterococcus sp. GMD5E]
gi|415888277|ref|ZP_11549092.1| GTP pyrophosphokinase [Enterococcus faecium E4453]
gi|416130760|ref|ZP_11597546.1| GTP pyrophosphokinase [Enterococcus faecium E4452]
gi|424779554|ref|ZP_18206474.1| GTP diphosphokinase [Enterococcus faecium V689]
gi|424795887|ref|ZP_18221693.1| GTP diphosphokinase [Enterococcus faecium S447]
gi|424819810|ref|ZP_18244850.1| GTP diphosphokinase [Enterococcus faecium R501]
gi|424853535|ref|ZP_18277909.1| GTP diphosphokinase [Enterococcus faecium R499]
gi|424869894|ref|ZP_18293570.1| GTP diphosphokinase [Enterococcus faecium R497]
gi|424938634|ref|ZP_18354408.1| GTP diphosphokinase [Enterococcus faecium R496]
gi|424952976|ref|ZP_18367967.1| GTP diphosphokinase [Enterococcus faecium R494]
gi|424956106|ref|ZP_18370901.1| GTP diphosphokinase [Enterococcus faecium R446]
gi|424959724|ref|ZP_18374290.1| GTP diphosphokinase [Enterococcus faecium P1986]
gi|424963000|ref|ZP_18377271.1| GTP diphosphokinase [Enterococcus faecium P1190]
gi|424966612|ref|ZP_18380376.1| GTP diphosphokinase [Enterococcus faecium P1140]
gi|424969680|ref|ZP_18383237.1| GTP diphosphokinase [Enterococcus faecium P1139]
gi|424974168|ref|ZP_18387418.1| GTP diphosphokinase [Enterococcus faecium P1137]
gi|424976523|ref|ZP_18389606.1| GTP diphosphokinase [Enterococcus faecium P1123]
gi|424979818|ref|ZP_18392650.1| GTP diphosphokinase [Enterococcus faecium ERV99]
gi|424983299|ref|ZP_18395893.1| GTP diphosphokinase [Enterococcus faecium ERV69]
gi|424986419|ref|ZP_18398840.1| GTP diphosphokinase [Enterococcus faecium ERV38]
gi|424989780|ref|ZP_18402034.1| GTP diphosphokinase [Enterococcus faecium ERV26]
gi|424993982|ref|ZP_18405949.1| GTP diphosphokinase [Enterococcus faecium ERV168]
gi|424996634|ref|ZP_18408432.1| GTP diphosphokinase [Enterococcus faecium ERV165]
gi|425000745|ref|ZP_18412295.1| GTP diphosphokinase [Enterococcus faecium ERV161]
gi|425003498|ref|ZP_18414862.1| GTP diphosphokinase [Enterococcus faecium ERV102]
gi|425007259|ref|ZP_18418397.1| GTP diphosphokinase [Enterococcus faecium ERV1]
gi|425010106|ref|ZP_18421078.1| GTP diphosphokinase [Enterococcus faecium E422]
gi|425013069|ref|ZP_18423816.1| GTP diphosphokinase [Enterococcus faecium E417]
gi|425017455|ref|ZP_18427958.1| GTP diphosphokinase [Enterococcus faecium C621]
gi|425020272|ref|ZP_18430589.1| GTP diphosphokinase [Enterococcus faecium C497]
gi|425022625|ref|ZP_18432796.1| GTP diphosphokinase [Enterococcus faecium C1904]
gi|425031926|ref|ZP_18437021.1| GTP diphosphokinase [Enterococcus faecium 515]
gi|425034244|ref|ZP_18439149.1| GTP diphosphokinase [Enterococcus faecium 514]
gi|425037683|ref|ZP_18442334.1| GTP diphosphokinase [Enterococcus faecium 513]
gi|425040580|ref|ZP_18445039.1| GTP diphosphokinase [Enterococcus faecium 511]
gi|425047514|ref|ZP_18451464.1| GTP diphosphokinase [Enterococcus faecium 509]
gi|425051955|ref|ZP_18455592.1| GTP diphosphokinase [Enterococcus faecium 506]
gi|425057217|ref|ZP_18460644.1| GTP diphosphokinase [Enterococcus faecium 504]
gi|425061739|ref|ZP_18464946.1| GTP diphosphokinase [Enterococcus faecium 503]
gi|427395763|ref|ZP_18888685.1| RelA/SpoT family protein [Enterococcus durans FB129-CNAB-4]
gi|430820722|ref|ZP_19439345.1| RelA/SpoT family protein [Enterococcus faecium E0045]
gi|430823660|ref|ZP_19442229.1| RelA/SpoT family protein [Enterococcus faecium E0120]
gi|430826557|ref|ZP_19444737.1| RelA/SpoT family protein [Enterococcus faecium E0164]
gi|430829158|ref|ZP_19447255.1| RelA/SpoT family protein [Enterococcus faecium E0269]
gi|430832404|ref|ZP_19450450.1| RelA/SpoT family protein [Enterococcus faecium E0333]
gi|430836653|ref|ZP_19454630.1| RelA/SpoT family protein [Enterococcus faecium E0680]
gi|430839686|ref|ZP_19457624.1| RelA/SpoT family protein [Enterococcus faecium E0688]
gi|430845201|ref|ZP_19463097.1| RelA/SpoT family protein [Enterococcus faecium E1050]
gi|430845719|ref|ZP_19463596.1| RelA/SpoT family protein [Enterococcus faecium E1133]
gi|430850320|ref|ZP_19468082.1| RelA/SpoT family protein [Enterococcus faecium E1185]
gi|430853864|ref|ZP_19471590.1| RelA/SpoT family protein [Enterococcus faecium E1258]
gi|430856707|ref|ZP_19474392.1| RelA/SpoT family protein [Enterococcus faecium E1392]
gi|430859526|ref|ZP_19477137.1| RelA/SpoT family protein [Enterococcus faecium E1552]
gi|430860918|ref|ZP_19478513.1| RelA/SpoT family protein [Enterococcus faecium E1573]
gi|430866741|ref|ZP_19481967.1| RelA/SpoT family protein [Enterococcus faecium E1574]
gi|430902730|ref|ZP_19484857.1| RelA/SpoT family protein [Enterococcus faecium E1575]
gi|430960575|ref|ZP_19487111.1| RelA/SpoT family protein [Enterococcus faecium E1576]
gi|431012401|ref|ZP_19490192.1| RelA/SpoT family protein [Enterococcus faecium E1578]
gi|431217876|ref|ZP_19501297.1| RelA/SpoT family protein [Enterococcus faecium E1620]
gi|431238716|ref|ZP_19503585.1| RelA/SpoT family protein [Enterococcus faecium E1622]
gi|431260184|ref|ZP_19505690.1| RelA/SpoT family protein [Enterococcus faecium E1623]
gi|431305128|ref|ZP_19508495.1| RelA/SpoT family protein [Enterococcus faecium E1626]
gi|431468375|ref|ZP_19514404.1| RelA/SpoT family protein [Enterococcus faecium E1630]
gi|431520320|ref|ZP_19516603.1| RelA/SpoT family protein [Enterococcus faecium E1634]
gi|431548672|ref|ZP_19519144.1| RelA/SpoT family protein [Enterococcus faecium E1731]
gi|431744430|ref|ZP_19533298.1| RelA/SpoT family protein [Enterococcus faecium E2071]
gi|431745118|ref|ZP_19533972.1| RelA/SpoT family protein [Enterococcus faecium E2134]
gi|431749532|ref|ZP_19538271.1| RelA/SpoT family protein [Enterococcus faecium E2297]
gi|431755466|ref|ZP_19544115.1| RelA/SpoT family protein [Enterococcus faecium E2883]
gi|431760950|ref|ZP_19549541.1| RelA/SpoT family protein [Enterococcus faecium E3346]
gi|431765578|ref|ZP_19554088.1| RelA/SpoT family protein [Enterococcus faecium E4215]
gi|431768374|ref|ZP_19556813.1| RelA/SpoT family protein [Enterococcus faecium E1321]
gi|431771621|ref|ZP_19560002.1| RelA/SpoT family protein [Enterococcus faecium E1644]
gi|431773741|ref|ZP_19562058.1| RelA/SpoT family protein [Enterococcus faecium E2369]
gi|431777486|ref|ZP_19565740.1| RelA/SpoT family protein [Enterococcus faecium E2560]
gi|431779833|ref|ZP_19568023.1| RelA/SpoT family protein [Enterococcus faecium E4389]
gi|431783794|ref|ZP_19571884.1| RelA/SpoT family protein [Enterococcus faecium E6012]
gi|431786298|ref|ZP_19574312.1| RelA/SpoT family protein [Enterococcus faecium E6045]
gi|68194634|gb|EAN09121.1| RelA/SpoT protein [Enterococcus faecium DO]
gi|257814524|gb|EEV43282.1| RelA/SpoT protein [Enterococcus faecium 1,230,933]
gi|257817809|gb|EEV45137.1| RelA/SpoT protein [Enterococcus faecium 1,231,502]
gi|257821199|gb|EEV48329.1| RelA/SpoT protein [Enterococcus faecium 1,231,501]
gi|257827315|gb|EEV53941.1| RelA/SpoT protein [Enterococcus faecium 1,231,410]
gi|257830589|gb|EEV57196.1| RelA/SpoT protein [Enterococcus faecium 1,231,408]
gi|260073324|gb|EEW61665.1| RelA/SpoT protein [Enterococcus faecium C68]
gi|260076771|gb|EEW64506.1| RelA/SpoT protein [Enterococcus faecium TC 6]
gi|289162086|gb|EFD09951.1| GTP pyrophosphokinase [Enterococcus faecium D344SRF]
gi|291590072|gb|EFF21864.1| GTP pyrophosphokinase [Enterococcus faecium E1071]
gi|291592971|gb|EFF24560.1| GTP pyrophosphokinase [Enterococcus faecium E1636]
gi|291598274|gb|EFF29367.1| GTP pyrophosphokinase [Enterococcus faecium U0317]
gi|291601565|gb|EFF31832.1| GTP pyrophosphokinase [Enterococcus faecium E1039]
gi|291605303|gb|EFF34758.1| GTP pyrophosphokinase [Enterococcus faecium E1162]
gi|313600272|gb|EFR79115.1| GTP diphosphokinase [Enterococcus faecium TX0133C]
gi|313645481|gb|EFS10061.1| GTP diphosphokinase [Enterococcus faecium TX0082]
gi|364093929|gb|EHM36159.1| GTP pyrophosphokinase [Enterococcus faecium E4452]
gi|364094941|gb|EHM37052.1| GTP pyrophosphokinase [Enterococcus faecium E4453]
gi|378939511|gb|AFC64583.1| GTP diphosphokinase [Enterococcus faecium Aus0004]
gi|388534871|gb|AFK60063.1| GTP diphosphokinase [Enterococcus faecium DO]
gi|402923904|gb|EJX44154.1| GTP diphosphokinase [Enterococcus faecium S447]
gi|402925120|gb|EJX45291.1| GTP diphosphokinase [Enterococcus faecium V689]
gi|402925823|gb|EJX45917.1| GTP diphosphokinase [Enterococcus faecium R501]
gi|402932657|gb|EJX52146.1| GTP diphosphokinase [Enterococcus faecium R499]
gi|402935071|gb|EJX54355.1| GTP diphosphokinase [Enterococcus faecium R497]
gi|402936556|gb|EJX55726.1| GTP diphosphokinase [Enterococcus faecium R496]
gi|402940183|gb|EJX59039.1| GTP diphosphokinase [Enterococcus faecium R494]
gi|402946666|gb|EJX64923.1| GTP diphosphokinase [Enterococcus faecium R446]
gi|402949655|gb|EJX67700.1| GTP diphosphokinase [Enterococcus faecium P1986]
gi|402950598|gb|EJX68588.1| GTP diphosphokinase [Enterococcus faecium P1190]
gi|402956167|gb|EJX73641.1| GTP diphosphokinase [Enterococcus faecium P1140]
gi|402957308|gb|EJX74705.1| GTP diphosphokinase [Enterococcus faecium P1137]
gi|402963682|gb|EJX80533.1| GTP diphosphokinase [Enterococcus faecium P1139]
gi|402968072|gb|EJX84574.1| GTP diphosphokinase [Enterococcus faecium ERV99]
gi|402969316|gb|EJX85739.1| GTP diphosphokinase [Enterococcus faecium P1123]
gi|402971897|gb|EJX88137.1| GTP diphosphokinase [Enterococcus faecium ERV69]
gi|402976533|gb|EJX92419.1| GTP diphosphokinase [Enterococcus faecium ERV38]
gi|402981157|gb|EJX96705.1| GTP diphosphokinase [Enterococcus faecium ERV26]
gi|402981321|gb|EJX96860.1| GTP diphosphokinase [Enterococcus faecium ERV168]
gi|402988221|gb|EJY03239.1| GTP diphosphokinase [Enterococcus faecium ERV165]
gi|402988601|gb|EJY03598.1| GTP diphosphokinase [Enterococcus faecium ERV161]
gi|402991807|gb|EJY06555.1| GTP diphosphokinase [Enterococcus faecium ERV102]
gi|402995444|gb|EJY09907.1| GTP diphosphokinase [Enterococcus faecium ERV1]
gi|403001134|gb|EJY15206.1| GTP diphosphokinase [Enterococcus faecium E422]
gi|403001881|gb|EJY15900.1| GTP diphosphokinase [Enterococcus faecium E417]
gi|403004240|gb|EJY18059.1| GTP diphosphokinase [Enterococcus faecium C621]
gi|403009667|gb|EJY23096.1| GTP diphosphokinase [Enterococcus faecium C497]
gi|403012474|gb|EJY25699.1| GTP diphosphokinase [Enterococcus faecium C1904]
gi|403014462|gb|EJY27465.1| GTP diphosphokinase [Enterococcus faecium 515]
gi|403020940|gb|EJY33429.1| GTP diphosphokinase [Enterococcus faecium 514]
gi|403021466|gb|EJY33924.1| GTP diphosphokinase [Enterococcus faecium 513]
gi|403028235|gb|EJY40070.1| GTP diphosphokinase [Enterococcus faecium 511]
gi|403033499|gb|EJY44999.1| GTP diphosphokinase [Enterococcus faecium 509]
gi|403036143|gb|EJY47507.1| GTP diphosphokinase [Enterococcus faecium 506]
gi|403040620|gb|EJY51683.1| GTP diphosphokinase [Enterococcus faecium 503]
gi|403040883|gb|EJY51930.1| GTP diphosphokinase [Enterococcus faecium 504]
gi|404455256|gb|EKA02115.1| GTP diphosphokinase [Enterococcus sp. GMD4E]
gi|404459225|gb|EKA05595.1| GTP diphosphokinase [Enterococcus sp. GMD3E]
gi|404464985|gb|EKA10494.1| GTP diphosphokinase [Enterococcus sp. GMD2E]
gi|404469816|gb|EKA14531.1| GTP diphosphokinase [Enterococcus sp. GMD1E]
gi|410735069|gb|EKQ76986.1| GTP diphosphokinase [Enterococcus sp. GMD5E]
gi|425723752|gb|EKU86639.1| RelA/SpoT family protein [Enterococcus durans FB129-CNAB-4]
gi|430439268|gb|ELA49634.1| RelA/SpoT family protein [Enterococcus faecium E0045]
gi|430441693|gb|ELA51764.1| RelA/SpoT family protein [Enterococcus faecium E0120]
gi|430444965|gb|ELA54762.1| RelA/SpoT family protein [Enterococcus faecium E0164]
gi|430480102|gb|ELA57296.1| RelA/SpoT family protein [Enterococcus faecium E0333]
gi|430481238|gb|ELA58395.1| RelA/SpoT family protein [Enterococcus faecium E0269]
gi|430487976|gb|ELA64669.1| RelA/SpoT family protein [Enterococcus faecium E0680]
gi|430490422|gb|ELA66947.1| RelA/SpoT family protein [Enterococcus faecium E0688]
gi|430496035|gb|ELA72155.1| RelA/SpoT family protein [Enterococcus faecium E1050]
gi|430535658|gb|ELA76057.1| RelA/SpoT family protein [Enterococcus faecium E1185]
gi|430540113|gb|ELA80331.1| RelA/SpoT family protein [Enterococcus faecium E1258]
gi|430540337|gb|ELA80540.1| RelA/SpoT family protein [Enterococcus faecium E1133]
gi|430543493|gb|ELA83555.1| RelA/SpoT family protein [Enterococcus faecium E1552]
gi|430544143|gb|ELA84187.1| RelA/SpoT family protein [Enterococcus faecium E1392]
gi|430550791|gb|ELA90561.1| RelA/SpoT family protein [Enterococcus faecium E1574]
gi|430551236|gb|ELA91005.1| RelA/SpoT family protein [Enterococcus faecium E1573]
gi|430554665|gb|ELA94250.1| RelA/SpoT family protein [Enterococcus faecium E1575]
gi|430556084|gb|ELA95600.1| RelA/SpoT family protein [Enterococcus faecium E1576]
gi|430559912|gb|ELA99236.1| RelA/SpoT family protein [Enterococcus faecium E1578]
gi|430569791|gb|ELB08777.1| RelA/SpoT family protein [Enterococcus faecium E1620]
gi|430572417|gb|ELB11279.1| RelA/SpoT family protein [Enterococcus faecium E1622]
gi|430576923|gb|ELB15548.1| RelA/SpoT family protein [Enterococcus faecium E1623]
gi|430579335|gb|ELB17844.1| RelA/SpoT family protein [Enterococcus faecium E1626]
gi|430584052|gb|ELB22403.1| RelA/SpoT family protein [Enterococcus faecium E1630]
gi|430585200|gb|ELB23495.1| RelA/SpoT family protein [Enterococcus faecium E1634]
gi|430590980|gb|ELB29025.1| RelA/SpoT family protein [Enterococcus faecium E1731]
gi|430605173|gb|ELB42578.1| RelA/SpoT family protein [Enterococcus faecium E2071]
gi|430611172|gb|ELB48282.1| RelA/SpoT family protein [Enterococcus faecium E2134]
gi|430611446|gb|ELB48536.1| RelA/SpoT family protein [Enterococcus faecium E2297]
gi|430616688|gb|ELB53583.1| RelA/SpoT family protein [Enterococcus faecium E2883]
gi|430623229|gb|ELB59929.1| RelA/SpoT family protein [Enterococcus faecium E3346]
gi|430628052|gb|ELB64509.1| RelA/SpoT family protein [Enterococcus faecium E4215]
gi|430629449|gb|ELB65850.1| RelA/SpoT family protein [Enterococcus faecium E1321]
gi|430633038|gb|ELB69221.1| RelA/SpoT family protein [Enterococcus faecium E1644]
gi|430635627|gb|ELB71720.1| RelA/SpoT family protein [Enterococcus faecium E2369]
gi|430639598|gb|ELB75471.1| RelA/SpoT family protein [Enterococcus faecium E2560]
gi|430641221|gb|ELB77034.1| RelA/SpoT family protein [Enterococcus faecium E4389]
gi|430644484|gb|ELB80099.1| RelA/SpoT family protein [Enterococcus faecium E6012]
gi|430645783|gb|ELB81286.1| RelA/SpoT family protein [Enterococcus faecium E6045]
Length = 737
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|89895197|ref|YP_518684.1| hypothetical protein DSY2451 [Desulfitobacterium hafniense Y51]
gi|219669627|ref|YP_002460062.1| (p)ppGpp synthetase I SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|423073423|ref|ZP_17062162.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
gi|89334645|dbj|BAE84240.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539887|gb|ACL21626.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|361855729|gb|EHL07687.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
Length = 726
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 305/519 (58%), Gaps = 55/519 (10%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
SP ++LV +A A EAH GQ R SGE +I HP+EVA+IL ELE+D +IAA LHD V
Sbjct: 14 SPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVV 73
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT+ T E IE EFG+ V +V+G V+KLG+++ K S ++++ ++LR+MFLAM
Sbjct: 74 EDTHY-TNEDIEREFGSQVAILVDG---VTKLGRIEYK----SKEELQVENLRKMFLAMA 125
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL KQ IA ETL++FAPLA LG+++IK ELE+LSF
Sbjct: 126 KDIRVILIKLADRLHNMRTLKFHSEKKQKEIALETLEIFAPLANRLGIFRIKWELEDLSF 185
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y ++Y + +A E E ++ E L K++ + + +K +I K Y
Sbjct: 186 RYLKPQEYYDLSEGIALKRAEREVQINEVISQLSKRLAE------VGIKADISGRPKHFY 239
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY+ ++ ++E+ + +R+I+ CY LG++H +W P+P
Sbjct: 240 SIYRKMINQHRELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTMWKPLPG 287
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYIA PKPN YQSLHTTL+ E E+QIRT EM AE GIAAH+ +
Sbjct: 288 RFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK---- 340
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G +P G N ++SWL + EWQ + + + EF++++ DL
Sbjct: 341 --EGAGKPVG------------GNFEQKLSWLRQMLEWQHD---SPDAGEFMESLKIDLF 383
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ LP G+ VD+AY +HT++G++ V AK+N +V LAN ++VE
Sbjct: 384 ADTVFVFTPKGDVVELPAGSCPVDFAYRVHTDVGHRCVGAKINSRIVPLETKLANGDIVE 443
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
I+T SK + + WL KT A+++I + +++
Sbjct: 444 ILT-----SKQSNGPSRDWLSFVKTSQAKNRIRGWFKKE 477
>gi|294618771|ref|ZP_06698298.1| GTP pyrophosphokinase [Enterococcus faecium E1679]
gi|291594959|gb|EFF26309.1| GTP pyrophosphokinase [Enterococcus faecium E1679]
Length = 737
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
gi|336432177|ref|ZP_08612016.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153793884|gb|EDN76304.1| RelA/SpoT family protein [Ruminococcus gnavus ATCC 29149]
gi|336019336|gb|EGN49062.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 768
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 320/543 (58%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+PE+L+E L + P+ ++ L+ +A L+ EAH Q R+SGEP+IIHP+ V IL +
Sbjct: 30 NPEQLYEALIARVRKYHPSADISLIEKAYKLSREAHKEQVRKSGEPYIIHPLWVGIILAD 89
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHDTVEDT + T E I EFG V +V+G TK+ +L K K E
Sbjct: 90 LEMDKETIVAGMLHDTVEDTEM-TVEDITREFGEEVALLVDGVTKLGQLSYSKDKLE--- 145
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
V+A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 146 ---VQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMVPAKQKEKARETMDIYAPIA 202
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y E Y ++ V DL E + E EE + ++ ++ +
Sbjct: 203 QRLGISKIKTELDDLSLKYYQPEVYFQL---VKDL-NERKTEREEFVQQIVAEV--SHHM 256
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 257 ENAHIQAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PK N YQSLHTTL+ PF E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPF--------EIQIRT 356
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + +G S + N + ++SWL I EW
Sbjct: 357 EEMHKTAEYGIAAHWK-----------YKESGGSAKN-----NKSREEEKLSWLRQILEW 400
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 401 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 457
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 458 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLSIVKSTQAKNKINQWF 512
Query: 658 REQ 660
+ +
Sbjct: 513 KHE 515
>gi|336054243|ref|YP_004562530.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
gi|333957620|gb|AEG40428.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
Length = 746
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 316/566 (55%), Gaps = 64/566 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFADKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT V T + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDTPV-TNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRAIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFSGVQTTSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTPRGE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPRGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W++ KT AR+KI ++ R Q + E + + +
Sbjct: 450 IEIMTQTNATPSRD-------WVDIVKTSRARNKIRRYFRSQDREQSIEHGQQMLANVIR 502
Query: 679 DSGEESEVEDLSDGSKQDKPLWEKIL 704
+ EDL+ DK EKIL
Sbjct: 503 E-------EDLAPKDFMDKEHIEKIL 521
>gi|425044315|ref|ZP_18448481.1| GTP diphosphokinase [Enterococcus faecium 510]
gi|403030120|gb|EJY41832.1| GTP diphosphokinase [Enterococcus faecium 510]
Length = 737
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
Length = 741
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 303/521 (58%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK +LE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWKLED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + + +F++++
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVYTSRARNKIKRYFKQ 483
>gi|227552630|ref|ZP_03982679.1| GTP diphosphokinase [Enterococcus faecium TX1330]
gi|257888143|ref|ZP_05667796.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
gi|293378678|ref|ZP_06624837.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
gi|424764268|ref|ZP_18191711.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
gi|431040301|ref|ZP_19492808.1| RelA/SpoT family protein [Enterococcus faecium E1590]
gi|431750927|ref|ZP_19539621.1| RelA/SpoT family protein [Enterococcus faecium E2620]
gi|431758269|ref|ZP_19546897.1| RelA/SpoT family protein [Enterococcus faecium E3083]
gi|431763734|ref|ZP_19552283.1| RelA/SpoT family protein [Enterococcus faecium E3548]
gi|227178256|gb|EEI59228.1| GTP diphosphokinase [Enterococcus faecium TX1330]
gi|257824197|gb|EEV51129.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
gi|292642718|gb|EFF60869.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
gi|402419837|gb|EJV52110.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
gi|430562153|gb|ELB01406.1| RelA/SpoT family protein [Enterococcus faecium E1590]
gi|430616185|gb|ELB53109.1| RelA/SpoT family protein [Enterococcus faecium E2620]
gi|430617932|gb|ELB54796.1| RelA/SpoT family protein [Enterococcus faecium E3083]
gi|430622107|gb|ELB58848.1| RelA/SpoT family protein [Enterococcus faecium E3548]
Length = 786
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 67 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 127 DVVEDTEV-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVNGTVEDIRVATEELGIFAEIYGRP 291
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 395 -YKEGKNEKVEPDG--------------MTKQLSWFHEILELQDE---SYDASEFMEGVK 436
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 497 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 534
>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
Length = 736
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 307/529 (58%), Gaps = 56/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ SY + +V++A LA +AH GQ R SGE +I HP+ VA+IL EL++D +
Sbjct: 11 EIIKKIQSYQIDAPIAIVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILAELQIDALT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I+A LLHD VEDT + E +E+ FG V +V+G TK+S++ E S ++ + +
Sbjct: 71 ISASLLHDVVEDT-AFSLEELEKLFGKEVAMLVDGVTKLSRI-------EYKSKEEQQLE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+MFLAM +++RV+++KLADRLHNMRTL HMP HKQ I+ ET ++FAPLA LG+
Sbjct: 123 NFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISS 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
+K ELE+L+F Y E Y ++ +V +E E+ + EA KIL +++D + +K
Sbjct: 183 VKWELEDLAFRYLEPEKYYELVEKVKQKRREREQLINEAIKILSTRLDD------VEIKA 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I+ K YSIYK +LK ++E+ ++ +RI L + CY LG+
Sbjct: 237 DIQGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRI------------LVDTVKDCYGALGV 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT+I + LE+QIRT +M +E GIA
Sbjct: 285 VHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQP---LEIQIRTMDMHRTSEYGIA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + G N + +++WL + EWQ++ E
Sbjct: 342 AHWRYKEGSKG-------------------ANKDFDEKLTWLRQLSEWQQDL---RDPHE 379
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ D+ VFVFTP+G++ +LP G+T +D+AY IHT +GN+ V A++NG ++
Sbjct: 380 FMETVKMDIFSDEVFVFTPKGDVIDLPAGSTPIDFAYRIHTGVGNRCVGARINGKMIPLE 439
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N ++VEI+T SK+ WL + ++KI ++ +++
Sbjct: 440 TKLTNGDIVEIVT-----SKTGNGPSWDWLNIVGSSDTKNKIRQWFKKE 483
>gi|189911774|ref|YP_001963329.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776450|gb|ABZ94751.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
Length = 684
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 308/519 (59%), Gaps = 49/519 (9%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
L P + +L+++A +A + H+GQKR SGEP+IIHP+ VA +L EL LD +IAAGLLHD
Sbjct: 21 LGPEKAQLIQKAYHIADKMHEGQKRLSGEPYIIHPMNVASVLDELGLDERAIAAGLLHDV 80
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VEDT+ T E + EFG + +VEG TK+S++ ++ S + A+++R+M LA
Sbjct: 81 VEDTSY-TKEDMAREFGEDIAALVEGVTKISEI-------KSQSKETEAAENIRKMLLAT 132
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
++VRV+++KLAD+ HN+RTL P KQ IA E L ++AP+A LG+Y++K ELE+L+
Sbjct: 133 IKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLYAPIAGRLGVYKVKFELEDLA 192
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F + ++Y ++K+RV+ E ++ +E+ KI++K Q L + + I K
Sbjct: 193 FQSLHPDEYQEIKKRVSAKKSERDEYIEKI-KIILK-----QRLAEINIDARIDGRAKHF 246
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
YSIY+ ++ S +E+ + +RII + + CY VLG+VH +WTPIP
Sbjct: 247 YSIYRKMVTKEKSFSEIFDLRAVRII------------ANEIKDCYGVLGIVHTLWTPIP 294
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYIATPK N YQSLHTT+ M EVQIRT+EM+ IAE G+AAH++
Sbjct: 295 GRFKDYIATPKTNLYQSLHTTVFGPDGRPM---EVQIRTKEMNAIAENGVAAHWA----- 346
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ + R + N A R+ WL ++ WQ+ ++ S+EF++ + DL
Sbjct: 347 ------YKESTNLTRSSVILQNGVENAFRMKWLEILKSWQDP---SLDSKEFMEELQYDL 397
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
+FVFTP+GEI +PKGATV+DYA+ IHT++G KVNG +V+ L + + V
Sbjct: 398 HEDEIFVFTPKGEIIEMPKGATVLDYAFRIHTDVGLHARGGKVNGRMVTLRTELKSGDQV 457
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
EIIT +SK + WL KT AR K+ + R+
Sbjct: 458 EIITEK--NSKPS----PIWLRIVKTSGARQKLRAYFRK 490
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/541 (38%), Positives = 316/541 (58%), Gaps = 72/541 (13%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
+RL E + Y S +++L+++A A + H+GQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 3 DRLNELIERVKRYASEEDIDLIKKAFEFAQKYHEGQARSSGEPYIVHPLEVALILADLEL 62
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHD VEDT+ + E IE EFG + +V+G V+KLGKL E S +
Sbjct: 63 DIASIVAGLLHDVVEDTSA-SLEDIEREFGKEIAELVDG---VTKLGKL----EFTSKLE 114
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APL L
Sbjct: 115 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLVHRL 174
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y + E Y + ++A E E+ ++ ++ +K+++
Sbjct: 175 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE------- 227
Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
E+ + P YSIY+ + + ++ E+ + +RII+ + +
Sbjct: 228 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 274
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQIRT
Sbjct: 275 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 326
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M AE GIAAH+ + GR + + + + +WL + EW
Sbjct: 327 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 366
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E ++EF++++ +L VFVFTP+G++ NLP+G+T +D+AY IH+EIGNKM
Sbjct: 367 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVINLPQGSTPIDFAYAIHSEIGNKMA 423
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI + ++
Sbjct: 424 GAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAWFKK 478
Query: 660 Q 660
+
Sbjct: 479 E 479
>gi|403386962|ref|ZP_10929019.1| GTP pyrophosphokinase [Clostridium sp. JC122]
Length = 725
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 313/515 (60%), Gaps = 58/515 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E VR+A L+FEAH QKR SGEP+IIHP+EVA IL EL LD +I AGLLHD +EDT
Sbjct: 17 DIEEVRKAFELSFEAHKEQKRESGEPYIIHPLEVACILAELGLDTSTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ T+E I + F V +V+G VSKLGK+K K + ++ +AD++R+M LAM +++
Sbjct: 77 DY-TYEDICQMFSVEVADLVQG---VSKLGKIKYKTK----EEQQADNVRKMLLAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHN+RTL KQ A ETL ++APLA LG+ +IK ELE+LS Y
Sbjct: 129 RVILIKLADRLHNLRTLKFKKEAKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ + ++ E E ++E ++K ++D+ LD + +K+EI K YSIY
Sbjct: 189 HEKEYYELVKEISQKRAEREVQIEN----IIKNLQDN--LDKVGIKSEIEGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ ++K +I+++ + +R+++ +G CY LG+VH I+ PIP K
Sbjct: 243 RKMVKKNKTIDQIFDLTAVRVLV-----DDIGD-------CYAALGIVHTIYKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
DYIA PKPN YQS+HTT+I PF +E+QIRT EM IAE GIAAH+ + ++
Sbjct: 291 DYIAMPKPNMYQSIHTTVIGPFGKP----VEIQIRTYEMHRIAEYGIAAHWKYKEGISN- 345
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
NN ++ R+SWL + EWQ E + EF++ DL
Sbjct: 346 ------------------NNDSLESRLSWLREMLEWQGE---TSDAEEFMEGFKIDLFSD 384
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVFTP+G++ +LP +T +D+AY IHT+IG+K AKVNG +V T+ L E+V++I
Sbjct: 385 EVFVFTPKGDVISLPYESTPIDFAYSIHTDIGHKCTGAKVNGKIVPLTYHLKTGEIVDVI 444
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
T SS S R W+ AK+ A+ KI +L+
Sbjct: 445 T----SSNSKGPRM-DWINIAKSNRAKSKIKSWLK 474
>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 213/521 (40%), Positives = 307/521 (58%), Gaps = 53/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+L++RA + + +AHDG RRSGEP+I HP+ VA +L +++LD ++AAGLLH
Sbjct: 13 SYIKDPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLADMQLDEATVAAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT+ T + IEE FG+ V IV+G TK+S++ E+ +VQ +A+++R++ L
Sbjct: 73 DTVEDTDT-TVDEIEELFGSDVADIVDGVTKISRM-----DFESKAVQ--QAENIRKLIL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV++VKLADRLHNMRTL +M P KQ IA ET ++APLA LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLEYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y + YA++ V EH E ++ I D L +K + K
Sbjct: 185 LCLRYLRPDVYAQLSEAV----HEHRAAGEPYIDKVIGLITD--MLKKNKIKGRVFGRTK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+SI + + + +E+ + R+I VG L + CY VLGL+H W P
Sbjct: 239 HLHSIQVKMEQQGLTFDEIYDLIAFRVI--------VGSL----KDCYAVLGLIHAAWRP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYI+ PK N YQSLHTT++ E R+E+QIRTEEM IAE G+AAH+ +
Sbjct: 287 VPGRFKDYISIPKANMYQSLHTTVMGPDGE---RIEIQIRTEEMHRIAEYGVAAHWQYKE 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G + +GKT +A R +WL I +WQ E REF+ ++
Sbjct: 344 VGKG----------AKKGKTAGRRDAE---RYTWLKQIMDWQREL---SDPREFMSSLRL 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
++ V+VFTP G+IK LP GAT VD+AY IH+E+G+K AKVNG +V + L N +
Sbjct: 388 EMFQDEVYVFTPNGDIKELPDGATPVDFAYSIHSEVGDKCAGAKVNGRIVPLQYRLQNGD 447
Query: 619 VVEIIT-YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
VEIIT N + S+ WL+ KT AR +I + R
Sbjct: 448 SVEIITDKNRVPSRD-------WLKFVKTAKARTRIKHYTR 481
>gi|241889887|ref|ZP_04777185.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
gi|241863509|gb|EER67893.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
Length = 725
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 310/522 (59%), Gaps = 55/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++E++R+A A +AH+GQ R+SGEP+I+HPV+VA IL EL+LD+ +I AG LHD
Sbjct: 19 YLSDEQIEIIRKAYEFAKDAHEGQFRKSGEPYILHPVQVAGILTELKLDYATICAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT TF+ I+E FG + IV+G V+KL K+K +++ S +A++ R++F++
Sbjct: 79 VVEDTKY-TFDDIKETFGEDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
+ +++RVI VKLADRLHNMRT+ +M KQ I++ETL+++APLA LG+ +K ELE+
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y + Y + + EK +++A + + D+ +K ++ K
Sbjct: 191 SLRYLHPSQYFSIVGMMKQKRSAREKSIKDACSSITSILADNN------IKAQVTGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++K + +++ + +R+++ V CY LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P +KDYIA PKPN YQSLHTT+I ++ LEVQIRT EM IAE+GIAAH++ +
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK V NN N +++W I E E T+ F++++ D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
LL +++VFTP +I LPKG+ +VD+AY IH+E+GNKMV A VN + +VL+ E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMVGATVNDKIEPFDYVLSTGEI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+I T SK++ ++ WLE A + + KI F ++ A
Sbjct: 449 CDIRT-----SKNSTGPNRSWLEIATSSQTKSKIKAFFKKAA 485
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 302/522 (57%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+SP ++ VRRA A +AH GQ R SGEP+I HP+ VA IL +L LD +I AGLLH
Sbjct: 19 SYMSPEDIAAVRRAYEFAAKAHQGQMRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLH 78
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V + I + FGA V +V+G TK+ ++ K + E +A++LR+MF+
Sbjct: 79 DVVEDTSV-SDSAIVQAFGAEVATLVDGVTKLKRI-KFDSREEQ------QAENLRKMFM 130
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RV+I+KLADRLHNMRTL + P Q A ETL++FAPLA LG+ IK ELE+
Sbjct: 131 AMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ +A +E E+ +E +L +K+ + + +K ++ K
Sbjct: 191 LSLRYLNPQQYYRIVNLMARKRQEREQYIEGVIAVLREKLAE------LNLKADVSGRAK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RII++ + CY LG+VH +W P
Sbjct: 245 HIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI------------KDCYGALGVVHTMWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I E LE+QIRT EM AE GIAAH+
Sbjct: 293 MPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEMHQTAEYGIAAHW---- 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
V G R + A +++W + EWQ++F ++EF++T+
Sbjct: 346 -VYKESGSKRVED-------------DFAKKLAWFREVLEWQQDF---RDAQEFMETLKI 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +VFVFTP+G++ LP G+ +D+AY IHT+IGN + AKVNG +V + L +
Sbjct: 389 DLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAKVNGKMVPLDYRLRTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT SK ++ WL+ +T A+ KI ++ + +
Sbjct: 449 IVEIIT-----SKHSYGPSWDWLKIVQTSQAKSKIRQWFKRE 485
>gi|430834057|ref|ZP_19452067.1| RelA/SpoT family protein [Enterococcus faecium E0679]
gi|430485957|gb|ELA62838.1| RelA/SpoT family protein [Enterococcus faecium E0679]
Length = 786
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 304/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 67 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 126
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 127 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 178
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 179 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 238
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 239 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 291
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 292 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 339
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 340 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 394
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++SW + I E Q+E + + EF++ +
Sbjct: 395 -YKEGKNEKVEPDG--------------MMKQLSWFHEILELQDE---SYDASEFMEGVK 436
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 437 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 496
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 497 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 534
>gi|312880418|ref|ZP_07740218.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
gi|310783709|gb|EFQ24107.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
Length = 760
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 210/521 (40%), Positives = 309/521 (59%), Gaps = 58/521 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL +L + AL+ A EAH QKR SGEP+++H + VA IL ++ELD E+++A LLHD
Sbjct: 59 YLDKEDLLRLGEALVFAAEAHREQKRHSGEPYVVHTISVASILADMELDVETLSAALLHD 118
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT V ++E FG V +V+G V+KLGKL K S++D +A++LR+MFL
Sbjct: 119 VLEDTPVGD-AVLKERFGPEVLTLVDG---VTKLGKLPFK----SIEDYQAENLRKMFLV 170
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRTL +Q +IA ETL+++APLA LG+YQ+K ELE+L
Sbjct: 171 MAKDIRVVLIKLADRLHNMRTLQAHRRDRQLAIAKETLEIYAPLAHRLGIYQVKRELEDL 230
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF + E Y +++RRV E E +++A IL +++ ++ V+ + K
Sbjct: 231 SFKILDPEIYYEIRRRVRKKLPEREAIIKQALDILQQRLLEE------GVEASLNGRPKH 284
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + S++++ + LR++ VG L CY VLGLVH IW PI
Sbjct: 285 FYSIYEKMRRKNLSLDQLYDLLALRVV--------VGGLAE----CYQVLGLVHTIWKPI 332
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P DYIA PK N YQSLHTT+ L S LEVQIRT EM +AE GIAAH+ +
Sbjct: 333 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHRLAEYGIAAHWHYK-- 387
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G R N + R++W+ + E Q++ EF+D + D
Sbjct: 388 ----EGKQRVN--------------QLDRRLTWIRQVLESQQD---GSEPTEFLDNLKTD 426
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+L S V VFTP+GE+ ++P G+T +D+AY IHTE+G++ V A VNG +V HVL+N ++
Sbjct: 427 VLSSEVLVFTPKGEVVSVPHGSTPIDFAYTIHTEVGHRCVGAMVNGRIVPMDHVLSNGDI 486
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V I+T + + WL+ A++ R+KI + R+Q
Sbjct: 487 VRILT------SPQGKPSRDWLKIARSNRTRNKIRAYFRQQ 521
>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 726
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 317/541 (58%), Gaps = 72/541 (13%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
++L E + Y S ++ L+++A A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7 DKLNELIEKVKKYASEEDINLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLEL 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHD VEDT+ + E +E EFG + +V+G V+KLGKL E S +
Sbjct: 67 DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y + E Y + ++A E E+ +++ ++ +K+++
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 231
Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
E+ + P YSIY+ + + ++ E+ + +RII+ + +
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M AE GIAAH+ + GR + + + + +WL + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 370
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI + ++
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAWFKK 482
Query: 660 Q 660
+
Sbjct: 483 E 483
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 314/538 (58%), Gaps = 61/538 (11%)
Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W DL I P +L LVR+A A +AH G+ RRSG+P+I HP+ VA IL E++LD
Sbjct: 31 WADLEQVIRERMPGMDLTLVRKAYEFADQAHAGKLRRSGDPYISHPLAVAIILAEMQLDQ 90
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV---Q 246
E++ A LLHD +EDT+ + E + FG + R+V+G V+KLG+++ E SV +
Sbjct: 91 ETLCAALLHDVIEDTDT-SVEELTTIFGERIARLVDG---VTKLGRIRWATEEDSVTREK 146
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
+ +A+ LR+MFLAM ++VRV+++KLADRLHNMRTL HMP KQ A ET++++APLA
Sbjct: 147 ERQAESLRKMFLAMVDDVRVVLIKLADRLHNMRTLEHMPRAKQLRSAQETMEIYAPLANR 206
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LG++Q+KSELE+L+ Y + + Y +KR + + E+ L+ L K + +
Sbjct: 207 LGIWQLKSELEDLALRYLDPQTYFSIKRALDRRGTDRERYLQRVINDLTKALAE------ 260
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
++ EI + K SI + + + S +E+ + +R+I+ K + CY
Sbjct: 261 AGIRAEISAREKHITSIARKMERKGRSFDEIYDVLGVRVIVDEK------------KDCY 308
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
LG++H +W PIP DYIATPK + YQS+HT + L LE+QIRT EM +A
Sbjct: 309 GALGVIHTMWHPIPGEFDDYIATPKESMYQSIHTAV---LGPDGHPLEIQIRTAEMHHVA 365
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + G ARP + N+ +I+WL + +W++E V
Sbjct: 366 EYGIAAHWR---YKEG----ARP-------------DPNVEAKIAWLRQLMDWRDEVV-- 403
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
++EFV+++ D+ ++VFTP+G+I LP GAT VD+AY IHTE+G++ V AKVN
Sbjct: 404 -DAQEFVESLKSDVFQEMIYVFTPKGDIIELPAGATPVDFAYRIHTEVGHQCVGAKVNNQ 462
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWL----EHAKTRSARHKIMKFLREQ 660
LV + L N +VV+I+T SK+ + WL + T SAR K+ ++ R Q
Sbjct: 463 LVPLNYRLQNGQVVQIMT-----SKTKVGPSRDWLMSSSGYITTASAREKVRQWFRRQ 515
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 317/541 (58%), Gaps = 72/541 (13%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
++L E + Y S ++ L+++A A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 3 DKLNELIERVKKYASEEDINLIKKAFDFAQKYHDGQARNSGEPYIVHPLEVALILADLEL 62
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHD VEDT+ + E +E EFG + +V+G V+KLGKL E S +
Sbjct: 63 DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIADLVDG---VTKLGKL----EFTSKLE 114
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA L
Sbjct: 115 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 174
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y + E Y + ++A E E+ +++ ++ +K+++
Sbjct: 175 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 227
Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
E+ + P YSIY+ + + ++ E+ + +RII+ + +
Sbjct: 228 -ANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIV------------NSVKD 274
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQIRT
Sbjct: 275 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 326
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M AE GIAAH+ + GR + + + + +WL + EW
Sbjct: 327 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 366
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM
Sbjct: 367 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 423
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI + ++
Sbjct: 424 GAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAWFKK 478
Query: 660 Q 660
+
Sbjct: 479 E 479
>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
6A]
gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 726
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 317/541 (58%), Gaps = 72/541 (13%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
++L E + Y S ++ L+++A A + HDGQ R SGEP+I+HP+EVA IL +LEL
Sbjct: 7 DKLNELIEKVKKYASEEDINLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLEL 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHD VEDT+ + E +E EFG + +V+G V+KLGKL E S +
Sbjct: 67 DIASIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTSKLE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA L
Sbjct: 119 RQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y + E Y + ++A E E+ +++ ++ +K+++
Sbjct: 179 GISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKE------- 231
Query: 368 TVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
E+ + P YSIY+ + + ++ E+ + +RII+ + +
Sbjct: 232 -ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NSVKD 278
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQIRT
Sbjct: 279 CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQIRT 330
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M AE GIAAH+ + GR + + + + +WL + EW
Sbjct: 331 FDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLRELLEW 370
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGNKM
Sbjct: 371 QKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGNKMA 427
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI + ++
Sbjct: 428 GAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAWFKK 482
Query: 660 Q 660
+
Sbjct: 483 E 483
>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 729
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 309/536 (57%), Gaps = 61/536 (11%)
Query: 128 ERLWEDLRPTISYLSP--NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
E+L+ L+ I P +LE + RA A H+ QKR SGE +I+HP+EVA +L +L
Sbjct: 5 EQLFFSLKEKIKSYYPLDTDLEQLDRAFEFARSYHNDQKRVSGEEYIVHPIEVALVLADL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD ++I+AGLLHD +EDT T E +EE FG + +V+G TK+S+L K K E+
Sbjct: 65 ELDLDTISAGLLHDVMEDTPA-TREELEELFGDEITLLVDGVTKLSRLN-FKTKEEH--- 119
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+A++LR+MF AM ++RVI++KLADR HNMRTL+++P KQ IA ET++++APLA
Sbjct: 120 ---QAENLRKMFFAMANDIRVILIKLADRTHNMRTLNYLPERKQKEIAKETMEIYAPLAN 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y+IK ELE+L+F Y E Y + R+ E E+ +++ L K+++
Sbjct: 177 RLGIYKIKWELEDLAFRYIEPEQYYYLADRIVQKRMEREEYIKKIKVDLRDKLKE----- 231
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
M + EI K YSIY + K+ +NE+ + LRII+ + + C
Sbjct: 232 -MGIDGEIHGRPKHLYSIYSKMKKTGKDLNEIYDLIALRIIV------------NNVKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG VH +W P+P KDYIA PK N YQSLHTT+ L +E+QIRT +M
Sbjct: 279 YAVLGTVHTMWKPVPGRFKDYIAVPKSNMYQSLHTTV---LCPQGNLVEIQIRTWDMHKT 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + ++ A ++SW + EWQ+E
Sbjct: 336 AEYGIAAHWKYK---------------------ENTDDKKFAEKVSWFRQLLEWQQE--- 371
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ EF++ + DL VFVFTP+G++ +LP G+T +D+AY IHT+IGN + AK++G
Sbjct: 372 TSDALEFMEHLKVDLFSDEVFVFTPKGDVIDLPSGSTPIDFAYRIHTDIGNTCIGAKISG 431
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VS + L +VVEI+T SK A + WL K+ A++KI ++ + Q+
Sbjct: 432 RMVSLDYQLQTGDVVEILT-----SKHA-TPSRDWLNLVKSSQAKNKIKQWFKRQS 481
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 320/547 (58%), Gaps = 61/547 (11%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE ++E ++ SY++ + V++A LA +AH Q R SGEP+IIHPV+VA IL EL
Sbjct: 8 TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D E++AAG LHD VEDT+ T + + EFG V +V+G V+KLGK+K ++
Sbjct: 65 QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYLSKEAQ- 119
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA
Sbjct: 120 ---QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +K ELE+ + Y N + Y R+ L K+ E E +M +++ L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMAEMKSQ--LN 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + ++ K YSIY+ ++ + NE+ + +R+ L + C
Sbjct: 231 EVEIDADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + G+ V N+ +++W I E+Q E
Sbjct: 336 AEYGIAAHWAYK-----------------EGRKVDHQKQNVDQKLTWFREILEFQNE--- 375
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ + EF++++ DL V+VFTP G++ LP G+ +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF----LREQA 661
+V L +++EI+T SK +F + WL+ A++ A++KI +F LRE+
Sbjct: 436 KMVPLDTPLKTGDIIEILT-----SKQSFGPSRDWLKIAQSSQAKNKIKQFFKRHLREEN 490
Query: 662 ALSASEI 668
+ E+
Sbjct: 491 IVKGKEM 497
>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
Length = 735
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 310/524 (59%), Gaps = 57/524 (10%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I +PN E+V +A LA +AH+GQ R+SGEP+ IHP+ VA IL E+ELD E+I AGL
Sbjct: 13 IKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGL 72
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T+E I++EFG V +V+G V+KLG++K + S ++ ++++LR+M
Sbjct: 73 LHDVVEDTEY-TYEDIKKEFGKEVADLVDG---VTKLGQIKYR----SKEETQSENLRKM 124
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +MPP K A ETL+++ +A LG+ +IK EL
Sbjct: 125 FLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWEL 184
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ + + + E Y + RV+ + E ++ ++L D+F DL ++ ++
Sbjct: 185 EDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELL-----KDKFKDL-SIPCDVYGR 238
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + K + E+ + +RI L + CY VLG+VH +W
Sbjct: 239 PKHFYSIYRKMQKKHKTFEEIFDLTAVRI------------LVDNVKDCYAVLGIVHTLW 286
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP KDYIA PKPN YQSLHTT++ E LE+QIRT EM IAE GIAAH+
Sbjct: 287 RPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTHEMHNIAENGIAAHWKY 343
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + + + + ++ WL + EW+++ +EF+D +
Sbjct: 344 K-------------------EGISSKESKVEEKLQWLRQMMEWEKDL---KDPQEFMDAL 381
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ S+V+VFTP+G++ LP +T +D+AY +HT +GNK V AK++G +V + L N
Sbjct: 382 KEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQN 441
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VE++T + + S + WL KT +A+ +I +F +++
Sbjct: 442 GNIVEVLTSSNSNGPS-----RDWLNIVKTPNAKSRIRQFFKKE 480
>gi|450077103|ref|ZP_21850203.1| putative stringent response protein [Streptococcus mutans N3209]
gi|449211514|gb|EMC11915.1| putative stringent response protein [Streptococcus mutans N3209]
Length = 740
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 313/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTLSH+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLSHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ + Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------NTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 210/568 (36%), Positives = 325/568 (57%), Gaps = 61/568 (10%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE ++E ++ SY++ + V++A LA +AH Q R SGEP+IIHPV+VA IL EL
Sbjct: 8 TPEDVFELVK---SYMNDENVAFVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAEL 64
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D E++AAG LHD VEDT+ T + + EFG V +V+G V+KLGK+K ++
Sbjct: 65 QMDPETVAAGFLHDVVEDTDF-TRDDLVREFGEEVAVLVDG---VTKLGKIKYLSKEAQ- 119
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA
Sbjct: 120 ---QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAH 176
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +K ELE+ + Y N + Y R+ L K+ E E +M +++ L+
Sbjct: 177 RLGISTVKWELEDTALRYLNPQQYY----RIVSLMKKKRDEREAYLDNVMAEMKSQ--LN 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + ++ K YSIY+ ++ + NE+ + +R+ L + C
Sbjct: 231 EVEIDADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRV------------LVDSIKDC 278
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIA PK N YQSLHTT+I + LEVQIRT+EM I
Sbjct: 279 YAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDP---LEVQIRTKEMHKI 335
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + GK N+ +++W I E+Q E
Sbjct: 336 AEYGIAAHWAYK-----------------EGKKADHQKQNVDQKLTWFREILEFQNE--- 375
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ + EF++++ DL V+VFTP G++ LP G+ +D+AY +H+E+GN+ + AK+NG
Sbjct: 376 SSNAEEFMESLKFDLFSDMVYVFTPEGDVIELPAGSVPIDFAYRVHSEVGNRTIGAKING 435
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF----LREQA 661
+V L +++EI+T SK +F + WL+ A++ A++KI +F LRE+
Sbjct: 436 KMVPLDTPLKTGDIIEILT-----SKQSFGPSRDWLKIAQSSQAKNKIKQFFKRHLREEN 490
Query: 662 ALSASEITADTVGDFVADSGEESEVEDL 689
+ E+ + D E E+L
Sbjct: 491 IVKGKEMIEKEIRSQDFDLKETMSAENL 518
>gi|320105665|ref|YP_004181255.1| (p)ppGpp synthetase I SpoT/RelA [Terriglobus saanensis SP1PR4]
gi|319924186|gb|ADV81261.1| (p)ppGpp synthetase I, SpoT/RelA [Terriglobus saanensis SP1PR4]
Length = 822
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 305/542 (56%), Gaps = 59/542 (10%)
Query: 128 ERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
+R +E L T+ P ++L ++R A E H GQKR SGEP+IIHP+EV ++L E++
Sbjct: 87 DRNFEKLLLTVHEARPSDDLGIIRDAWKFCVEQHVGQKRASGEPYIIHPLEVGQVLAEMK 146
Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
+D +IAAGLLHD VEDT+V T E I FG V IVEG V+KL ++K N+ +
Sbjct: 147 MDSTAIAAGLLHDAVEDTDVSTPE-IARRFGEQVAHIVEG---VTKLDRIKFANK----E 198
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
D +A+++R+M LAM ++RV+++KLADRLHNMRTL H+ P KQ IA ETL ++APLA
Sbjct: 199 DHQAENIRKMLLAMVTDIRVVLIKLADRLHNMRTLQHLKPEKQMKIARETLDIYAPLAHR 258
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LGM +++ E E+L+F Y + Y +V VA L E EK L + K+ +
Sbjct: 259 LGMGKLRGEFEDLAFRYVDPVAYEQVSEEVAKLRVEGEKFLSGIVATIEAKLTEHG---- 314
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+ + E R K YSI + + +++V + +R+I + Q CY
Sbjct: 315 IPARVEWR--IKRLYSIQQKLAAQAIPVDQVYDLLAIRVITQ------------TMQDCY 360
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
LGL+H IW P+P +KD+IA P+PN YQSLHTTL+ E + EVQIRT+EM IA
Sbjct: 361 ATLGLLHSIWRPVPGRIKDFIAMPRPNLYQSLHTTLVA---EGGHQFEVQIRTDEMHRIA 417
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + +TV + R++W+ + EWQ E
Sbjct: 418 EEGIAAHWKYKA-----------------DETVSAKDEQ---RLAWVRQLMEWQREMT-- 455
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
EF+ T+ DL V+ FTP+G++ LPK A+ +D+AY IHTE+G+ + AKVNG
Sbjct: 456 -DPNEFMSTLKIDLYPEEVYTFTPKGKVVVLPKDASPIDFAYTIHTEVGHTTIGAKVNGR 514
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSAS 666
+V L N ++VEI T ++ + WL K+ AR+KI +L E A
Sbjct: 515 IVPLRTRLRNGDIVEITT------QAGHTPSRDWLSFTKSSRARNKIKHWLNEHQRERAM 568
Query: 667 EI 668
EI
Sbjct: 569 EI 570
>gi|365924968|ref|ZP_09447731.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266340|ref|ZP_14768816.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425624|gb|EJE98566.1| GTP pyrophosphokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 741
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 303/532 (56%), Gaps = 64/532 (12%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
+R Y++ + LV++A A H Q R+SGEP+IIHP++VA IL +L++D ++
Sbjct: 13 IRGVQKYMNEKHVALVKKAYDFANYVHKDQHRQSGEPYIIHPIQVAGILVDLKMDPATVC 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
AG LHD VEDT V T + E FG V IV+G TK+SK+ + S Q A++
Sbjct: 73 AGFLHDVVEDTPV-TLGDLAELFGKDVEIIVDGVTKLSKI-------QYKSHQQQLAENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R++ LAM++++RVIIVKLADRLHNMRTLSH+ P KQ IA ETL+++APLA LG+ IK
Sbjct: 125 RKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIYAPLADRLGISTIK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE++S Y N + Y ++ + E + +++A + K I D + V EI
Sbjct: 185 WELEDVSLRYLNPQQYYRIVHLMNSKRTERVQYIDKAIVDIKKSIAD------LNVDCEI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + +++ + +R+I+ + CY VLG +H
Sbjct: 239 YGRPKHIYSIYRKMKDQHKQFSQIYDLLAVRVIV------------HSIKDCYAVLGAIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAER 488
W P+P KDYIA PK N YQSLHTT+I PF EVQIRT EM +AE
Sbjct: 287 TQWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQPF--------EVQIRTSEMHRVAEY 338
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH++ + GKT + N + +++W I E Q+E +
Sbjct: 339 GIAAHWAYK-----------------EGKTEAVANDDTGTKLNWFKEIIELQDE---SSD 378
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+ EFV+++ DL G RV+VFTP+G++ LPKGA +D AY IHTEIGNK V KVNG +V
Sbjct: 379 AAEFVESVKGDLFGDRVYVFTPKGDVFELPKGAGPLDMAYSIHTEIGNKTVGTKVNGKMV 438
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ + N ++V+I+T SS SA + WL+ T AR+KI +F ++Q
Sbjct: 439 PLDYQVKNGDIVDILT----SSNSAGPS-QDWLKLVHTNKARNKIKRFFKQQ 485
>gi|386336903|ref|YP_006033072.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334279539|dbj|BAK27113.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 739
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 324/545 (59%), Gaps = 54/545 (9%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLITIRCIME-----------TPSDV-YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N A+ ++W+ + E Q+ N + +FVD++
Sbjct: 346 KQGIKGKV-----------------DNQEQAVGMNWIKELVELQD--ASNGDAVDFVDSV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ L K + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 387 KQDIFSERIYVFTPTGAVQELLKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 447 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 501
Query: 677 VADSG 681
+ G
Sbjct: 502 FQEQG 506
>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 317/524 (60%), Gaps = 66/524 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S +++ L+ +A A +AH+GQ R SGEP+I+HPVEVA IL +LELD +IA+GLLHD +
Sbjct: 15 SEDDINLILKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVI 74
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT++ ++E I+ EFG + +V+G V+KLG ++ K++ +A+++R+M +AM
Sbjct: 75 EDTSI-SYEDIKNEFGQEIADLVDG---VTKLGMIEYKSKVEQ----QAENMRKMLIAMA 126
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL + KQ A ETL+++AP+A LGM IK ELE+LS
Sbjct: 127 KDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSL 186
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + ++Y + +VA KE E+ ++E L++K+++ L+ + +K ++ K Y
Sbjct: 187 RYLHPDEYYSLVEKVAKKRKEREESIKE----LIEKLKEK--LNEIGIKADVDGRPKHFY 240
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIYK + + + ++ + +R+I+ + + CY LG+VH +W P+P
Sbjct: 241 SIYKKMKQQNKTFEQIYDLMAVRVIV------------NTVKDCYGTLGVVHTLWKPMPG 288
Query: 442 AMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
KDYIA PKPN YQSLHTT+I PF E+QIRT +M AE GIAAH+
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTVIGPKGEPF--------EIQIRTWDMHRTAEYGIAAHW-- 338
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK+ ++SWL + EWQ E ++EF++T+
Sbjct: 339 ---------------KYKEGKSY---EDEFDAKLSWLRQLLEWQREL---KDAKEFMETL 377
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL V+VFTP+G++ +LP G+T +D+AY IHTEIG+++ AKVNG +V + L N
Sbjct: 378 KIDLFTDEVYVFTPKGDVISLPAGSTPIDFAYSIHTEIGHRLNGAKVNGKIVPIDYELKN 437
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T ++ + + WL+ K+ A++KI ++ +++
Sbjct: 438 GDIVEILT----TTNADRGPSRDWLQIVKSSQAKNKIRQWFKKE 477
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 308/521 (59%), Gaps = 53/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+L++RA + + +AHDG RRSGEP+I HP+ VA +L E++LD ++AAGLLH
Sbjct: 13 SYIDNPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLAEMQLDEATVAAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT + + IEE FG+ V IV+G TK+S++ E+ +VQ +A+++R++ L
Sbjct: 73 DTVEDTQA-SVDEIEEFFGSDVADIVDGVTKISQM-----DFESKAVQ--QAENIRKLIL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV++VKLADRLHNMRTL M P KQ IA ET ++APLA LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLEFMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y + + ++ + V+ EH E ++ I D L +K + K
Sbjct: 185 LCLRYLKPDVFDQLSQAVS----EHRASGEPYIDKVIDLIND--MLKKNKIKGRVYGRTK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+SI+ + + + +E+ + RII++ + CY VLGL+H IW P
Sbjct: 239 HLHSIHVKMEQQGLTFDEIYDLIAFRIILE------------SVKDCYAVLGLIHSIWRP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYI+ PK N YQSLH+T+I E R+EVQIRTEEM+ IAE G+AAH+ +
Sbjct: 287 VPGRFKDYISIPKANMYQSLHSTVIGPDGE---RIEVQIRTEEMNRIAEYGVAAHWQYKE 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
VG RS + A R +WL I +WQ E REF+ ++
Sbjct: 344 -----VGKGSKRARSA--------DTRDAERYTWLRQIMDWQREL---SDPREFMASLRL 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
++ V+VFTP G+IK LP+GAT VD+AY IH+E+G+K AKVNG +V L N +
Sbjct: 388 EMFQEEVYVFTPSGDIKELPEGATPVDFAYAIHSEVGDKCAGAKVNGRIVPLHSPLKNGD 447
Query: 619 VVEIIT-YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
VEIIT N + S+ WL+ KT AR +I +++R
Sbjct: 448 SVEIITDKNRMPSRD-------WLKFVKTAKARTRIKQYIR 481
>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
Length = 724
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 207/523 (39%), Positives = 302/523 (57%), Gaps = 57/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+YL ++E V+ A A EAH GQ R+SGEP+IIHP+EVA IL +L +D +I +G LH
Sbjct: 12 TYLDAKDIETVKEAYRFADEAHKGQVRKSGEPYIIHPIEVAGILVQLNMDVTTIVSGFLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T + I +FG V +V+G TK+ E S +D +A++ R+MF+
Sbjct: 72 DVVEDTRV-TLDDIRVKFGDNVAELVDGVTKLRNF-------EYTSKEDQQAENHRKMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++R +IVKLADRLHNMRTL +M KQ A ETL+++APLA LG+ IK ELE+
Sbjct: 124 AMARDLRCVIVKLADRLHNMRTLKYMRHEKQIQKANETLEIYAPLANRLGISAIKWELED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFLDLMTVKTEIRSVC 377
+S Y + Y K + +L K+ +E E + K +ED ++ + + E+
Sbjct: 184 ISLRYLKPQQYYK----IVNLMKQKREERE---AYIAKVVEDLKAYVKSVHIPAEVSGRP 236
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ ++ NE+ + +RII+K + CY +LG++H W
Sbjct: 237 KHIYSIYRKMVNQHKQFNEIYDLFAVRIIVK------------TIKDCYAILGIIHTHWK 284
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PKPN YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 285 PMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTEEMHDVAEYGIAAHWAYK 341
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GK +NN R++W I E+Q E ++EF++T+
Sbjct: 342 -----------------EGKVKNINN-KFEDRLTWFREILEYQNE---TDDAKEFMETLK 380
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL VFVFTP+G++ LP G+ +D+AY IHTEIGNK V A+VNG +V + L
Sbjct: 381 MDLFSDTVFVFTPKGDVIELPVGSVPIDFAYRIHTEIGNKTVGARVNGKMVPLDYKLKTG 440
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VE++T N ++ + WL+ AK+ + ++KI ++ + Q
Sbjct: 441 DIVEVMTSN-----HSYGPSRDWLKIAKSSAVKNKIRQWFKRQ 478
>gi|288904393|ref|YP_003429614.1| GTP pyrophosphokinase (stringent response) [Streptococcus
gallolyticus UCN34]
gi|288731118|emb|CBI12664.1| GTP pyrophosphokinase (stringent response) [Streptococcus
gallolyticus UCN34]
Length = 735
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 324/545 (59%), Gaps = 58/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S +++ +V++AL A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGILADLHLDVVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT V T + IE EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEV-TLDDIEAEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++KKI+D + + E+
Sbjct: 188 EDLSFRYLNEIEFYKISHMMNEKRREREALVDE----IVKKIKD--YTQEQGLYGEVYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I++ +P + Y ++G +H +W
Sbjct: 242 PKHIYSIYRKIKR----FDQIYDLIAIRCIME-----------TPSDV-YAMVGYIHELW 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 286 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAY 341
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +N A+ ++W+ E Q+ N + +FVD++
Sbjct: 342 KQGIKGKV-----------------DNQEQAVGMNWIKEFVELQD--ASNGDAVDFVDSV 382
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+D+ R++VFTP G ++ LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 383 KQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAVGAKVNGRMVPLTAKLKT 442
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T + ++F + W++ KT AR++I +F + Q ++ + + D+
Sbjct: 443 GDVVEIVT-----NPNSFGPSRDWIKIVKTNKARNRIRQFFKNQDKETSINKGRELLVDY 497
Query: 677 VADSG 681
+ G
Sbjct: 498 FQEQG 502
>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
Length = 779
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 319/545 (58%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+++L +I P +++ ++ +A +A H QKR+SGEP+IIHP+ VA IL +
Sbjct: 42 SPEVLYQELIASIRRYHPSDDISMIEKAYHVADNFHKEQKRKSGEPYIIHPLCVAIILAD 101
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAG+LHD VEDT V+T + + +EFG V +V+G TK+++L K E
Sbjct: 102 LEMDKETIAAGILHDVVEDT-VMTLDELGKEFGEEVALLVDGVTKLTQLSWSMDKME--- 157
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ A ET++++AP+A
Sbjct: 158 ---LQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKARETMEIYAPIA 214
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK EL++LS Y + Y + +++ L K +A + +K I D+ +
Sbjct: 215 HRLGISKIKIELDDLSLKYLQPDVYYDLAEKIS-LKK-------DARESFVKSIVDEVQE 266
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
L ++ ++ K +SIYK ++ +++++ + +RII+
Sbjct: 267 HLKEASIVAKVDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIV------------DSV 314
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QI
Sbjct: 315 KDCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPF--------EIQI 366
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM AE GIAAH+ + +G V + ++SWL I
Sbjct: 367 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGKEEE-----------------KLSWLRQIL 409
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ++ N +EF++ + DL V+ FTP G++KNLP G+T +D+AY IH+ +G
Sbjct: 410 EWQKDMSDN---KEFLNMVKGDLDLFSDSVYCFTPSGDVKNLPSGSTPIDFAYSIHSAVG 466
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG LV+ +V+ N + VE+IT S + WL K+ A++KI +
Sbjct: 467 NKMVGARVNGKLVNIDYVIQNGDQVEVITSQNCKGPS-----RDWLNIVKSTQAKNKINQ 521
Query: 656 FLREQ 660
+ + +
Sbjct: 522 WFKTE 526
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 323/562 (57%), Gaps = 66/562 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+P E+ + ++P +L LV +A +A H GQ R+SGEP+IIHP+ V+ IL
Sbjct: 5 APVMTTEEFIAQLKSINPKYDLPLVVKAFEIANRLHSGQLRKSGEPYIIHPIAVSFILAT 64
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
+D E+I AGL+HD VEDT T E++ E+FG + +V+G V+KLG +K S
Sbjct: 65 FGMDTETIIAGLMHDVVEDTPY-TREQLVEDFGEEIALLVDG---VTKLGNIKYD----S 116
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++++A++ R+MFLAM++++RV+I+KLADRLHNMRTL +MP K+ A ETL+++APLA
Sbjct: 117 KEELQAENFRKMFLAMSKDIRVLIIKLADRLHNMRTLEYMPTTKREEKALETLEIYAPLA 176
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+Y IK ELE+L+ MY + +Y ++ +V + E +++ L+ +I+ L
Sbjct: 177 GRLGIYSIKFELEDLALMYLHPTEYRELSNKVNKRRQSREAVVQQ----LITEIK--AGL 230
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
D ++ E+ K YSIYK ++ + ++E+ + +R+I+ +
Sbjct: 231 DKANIEYEVTGRSKHLYSIYKKMVIQKKQLDEIFDLTAIRVIV------------DNIKD 278
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LGLVH WTPIP KDYIA PKPN YQS+HTT++ PF E+QIRT
Sbjct: 279 CYATLGLVHTRWTPIPGRFKDYIAMPKPNMYQSIHTTVLDDEGNPF--------EIQIRT 330
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+EM IAE GIAAH+ + GK+ N + +++WL EW
Sbjct: 331 KEMHRIAEYGIAAHW-----------------KYKEGKSDSKQNED-EKKLAWLRQALEW 372
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q+E S EF++T+ DL +VFVFTP G++ LP +T +D+A+ IHT++G + V
Sbjct: 373 QKE---TDDSLEFLETLKVDLFDHQVFVFTPHGDVVELPASSTPIDFAFKIHTDVGVRCV 429
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
AKVNG +V+ H L ++VEIIT S ++ WL AK+ A++KI +LR+
Sbjct: 430 GAKVNGKMVTIDHKLMTGDIVEIIT-----SANSAGPSMDWLNIAKSSQAKNKIRNWLRK 484
Query: 660 QAALSASEITADTVGDFVADSG 681
S E + + +++ G
Sbjct: 485 ADRTSVVEKGKNNITNYIKKKG 506
>gi|419718385|ref|ZP_14245704.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
gi|383305419|gb|EIC96785.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
Length = 762
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 315/538 (58%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L + L I + P +++ ++ +A LA +AH+ QKR+SGEP++IHP+ VA IL E
Sbjct: 25 SPESLHKKLIEIILHYHPSDDISMITKAYELAKKAHNDQKRKSGEPYLIHPICVAIILAE 84
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+IAAGLLHD +EDT V+T+ + + FG V +V+G V+KL +L KN+
Sbjct: 85 LELDKETIAAGLLHDVIEDT-VITYNELADMFGIDVANLVDG---VTKLTQLSLKNDKIE 140
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 141 MQ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIA 197
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y + + Y + ++A ++ ++ ++E ++KK Q L
Sbjct: 198 QRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVDE----IIKKFS--QHL 251
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K I K +SIYK ++ +++++ + +RII++
Sbjct: 252 SATGMKYTINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVTD------------ 299
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG H I+ PIP KDYIA PK N YQSLHTTLI ++ EVQIRT EM
Sbjct: 300 CYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLIS---DTGQPFEVQIRTYEMHK 356
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + +G +G +++WL I EWQ +
Sbjct: 357 TAEFGIAAHWKYK---------ESGSGSEAKGAEDA--------KMNWLRQILEWQRDMS 399
Query: 545 GNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N EF+ I DL V+ FTP G++KNLP G+ +D+AY IH+ +GNKMV A+
Sbjct: 400 DNA---EFLKVIKSDFDLFSDNVYCFTPDGDVKNLPAGSNPIDFAYSIHSAVGNKMVGAR 456
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ + L + + VEIIT S+++ + WL K+ AR KI ++ + +
Sbjct: 457 VNGRLVNIDYELKSGDRVEIIT-----SQNSKGPSRDWLNIVKSNQARSKIQQWFKNE 509
>gi|317128220|ref|YP_004094502.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
gi|315473168|gb|ADU29771.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
Length = 726
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 310/521 (59%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL N++ ++ A +A AH Q R+SGEP+I HPV+VA IL +L +D ++IAA LHD
Sbjct: 13 YLLENDVAFIKEAYEVAEVAHKEQFRKSGEPYIWHPVQVAGILVDLGMDPKTIAAAFLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V E + FG V +V+G V+KLGK+K K S ++ +A++ R+MF+A
Sbjct: 73 VVEDTDV-KLEDLANRFGNEVAMLVDG---VTKLGKIKYK----SKEEQQAENHRKMFVA 124
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL H+PP KQ IA ETL++FAPLA LG+ +IK ELE+
Sbjct: 125 MAKDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISKIKWELEDT 184
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y R+ +L K+ E E+ + KI + L+ + V+ I K
Sbjct: 185 SLRYLNPQQYY----RIVNLMKKKRAEREDYIDEVQNKIRER--LEGVGVQAGIHGRAKH 238
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + NE+ + +RII+ + + CY VLG++H W P+
Sbjct: 239 IYSIYRKMALQNKQFNEIYDLLAVRIIV------------NSIKDCYAVLGIIHTQWKPM 286
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIR+E+M +AE G+AAH++ +
Sbjct: 287 PGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRSEDMHKVAEFGVAAHWAYK-- 341
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT+ N + ++SW I EWQ + ++EF++++ D
Sbjct: 342 ---------------EGKTMK-QNETLETKMSWFREILEWQND---TNDAQEFMESLKID 382
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ LPKG+ +D+A+ IHTE+GN+ + AKVNG +V H L ++
Sbjct: 383 LFSDMVFVFTPKGDVIELPKGSVPLDFAFRIHTEVGNRCIGAKVNGKMVPLDHPLQTGDI 442
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T SK ++ + WL+ ++ A++KI ++ +++
Sbjct: 443 VEVLT-----SKHSYGPSQDWLKITQSSHAKNKIRQWFKKE 478
>gi|452850965|ref|YP_007492649.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
gi|451894619|emb|CCH47498.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
Length = 724
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 307/521 (58%), Gaps = 53/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+L++RA + + +AHDG RRSGEP+I HP+ VA +L +++LD ++AAGLLH
Sbjct: 13 SYIDHPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVANLLADMQLDEATVAAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT+ T + IEE FG+ V IV+G TK+SK+ E+ +VQ +A+++R++ L
Sbjct: 73 DTVEDTDT-TVDEIEELFGSDVADIVDGVTKISKM-----DFESKAVQ--QAENIRKLIL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV++VKLADRLHNMRTL +M P KQ IA ET ++APLA LG++++K+ELE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLQYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y + V ++ D EH E ++ I++ L+ +K + K
Sbjct: 185 LCLRYLKPD----VFEQLTDAVSEHRAAGEPYIDKVIDLIQN--MLNKNKIKGRVYGRTK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+SI+ + + + +E+ + RII+ + CY VLGL+H W P
Sbjct: 239 HFHSIHVKMEQQGLTFDEIYDLIAFRIIV------------DSLKDCYSVLGLIHAAWRP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYI+ PK N YQSLH+T+I E R+EVQIRT+EM+ IAE G+AAH+ +
Sbjct: 287 VPGRFKDYISIPKANMYQSLHSTVIGPDGE---RIEVQIRTDEMNQIAEYGVAAHWQYKE 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+ +GKT +A R +WL I +WQ E REF+ ++
Sbjct: 344 VGKGI----------KKGKTAGTRDAE---RYTWLKQIMDWQREL---SDPREFMSSLRL 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
++ V+VFTP G+IK LP GAT VD+AY IH+E+G+ AKVNG +V L N +
Sbjct: 388 EMFQDEVYVFTPNGDIKELPDGATPVDFAYAIHSEVGDICAGAKVNGRIVPLHSTLQNGD 447
Query: 619 VVEIIT-YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
VEIIT N + S+ WL+ KT AR +I ++R
Sbjct: 448 SVEIITDKNRVPSRD-------WLKFVKTAKARTRIKHYIR 481
>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
Length = 743
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 307/537 (57%), Gaps = 63/537 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E+ L+ RA A++ H+GQ R+SGEP+I HP+ VA +L +L D IAAG LHD VEDT
Sbjct: 35 EISLICRAFNFAYQLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDKAMIAAGFLHDVVEDT 94
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E+IEE FG+ VR++VEG TK+SK K E+ +A++ R+MFLAM +++
Sbjct: 95 DV-TVEQIEENFGSEVRQLVEGVTKLSKFN-FSSKTEH------QAENFRRMFLAMAKDI 146
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA LG+++ K ELE+LSF Y
Sbjct: 147 RVIVVKLADRLHNMRTLEHLKPEKQERIARETKEIFAPLANRLGIWRFKWELEDLSFKYL 206
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E Y +++ VA+ + E LE ++L +++ Q + + V E++ K Y IY
Sbjct: 207 EPEAYREIQSLVAEKRSDRETRLETIKEMLRQRL---QKIGVQVV--ELQGRPKHLYGIY 261
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + N++ IA LRII+K + CY L +VH + PIP K
Sbjct: 262 HKMQRQQKGFNQIYDIAALRIIVKNN------------EDCYRALAVVHDAFKPIPGRFK 309
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT++ LEVQIRT EM IAE GIAAH+ + TG
Sbjct: 310 DYIGLPKPNRYQSLHTTVVGLTGRP---LEVQIRTLEMHHIAEYGIAAHWKYK--ETGGS 364
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
H + + +WL + EWQ++ ++E+VDT+ +L
Sbjct: 365 DHTELSEEDE--------------KFTWLRQLLEWQKDL---QDAQEYVDTLKDNLFDDD 407
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN---LVSPTHVLANAEVVE 621
V+VFTP+G++ L +G+T VD+AY IHTE+GN M A++N L +P H N ++VE
Sbjct: 408 VYVFTPQGDVVALARGSTPVDFAYRIHTEVGNHMKGARINEKWSVLDTPLH---NGDIVE 464
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
IIT + WL A T SAR++I ++ RE+ E+ +G
Sbjct: 465 IIT------QKNCHPSLDWLNFAVTPSARNRIRQWYKRSRREENVARGREMLEKELG 515
>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 737
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 206/511 (40%), Positives = 302/511 (59%), Gaps = 53/511 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++++V++A A +AH QKR+SGEP+IIHP+ VA IL EL +D +I AGLLHD +EDT
Sbjct: 17 DIDMVKKAYYFAEDAHKEQKRQSGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++E + F + ++EG TK+++LG+++ K + ++ +AD++R+M LAM +++
Sbjct: 77 EF-SYEETVKLFNEEIGNLIEGVTKLTRLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ + A ETL ++APLA LGM +IK ELE+L F Y
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT--VKTEIRSVCKEPYS 382
+ ++Y ++ +A EK +E I K I DD + L ++++I K YS
Sbjct: 192 HEKEYYELVDSIA------EKRVERETYI--KDIVDDLYAKLQAAGIESDIDGRPKHFYS 243
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
IYK ++ SI ++ + +RI L + + CY VLG+VH I+ PIP
Sbjct: 244 IYKKMVNKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYRPIPGR 291
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
KDYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ +
Sbjct: 292 FKDYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK----- 343
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
G + +G+ + ++ WL + EWQ+E + EF++ DL
Sbjct: 344 -------EGDTSKGED---KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFS 390
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
VFVFTP+G + NL + AT +D+AY IHT++GNK V AKVNG +V + L E+VEI
Sbjct: 391 DEVFVFTPKGVVINLCRDATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEI 450
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
+T S +A + WL AK+ ++ KI
Sbjct: 451 LT-----SPNAKGPNMDWLNIAKSNQSKSKI 476
>gi|423321551|ref|ZP_17299422.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
gi|405594489|gb|EKB67900.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
Length = 746
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 316/566 (55%), Gaps = 64/566 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K L+ + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LNELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W++ KT AR+KI ++ R Q + + + D +
Sbjct: 450 IEIMTQTNAAPSRD-------WVDMVKTSRARNKIRRYFRSQDREDSIQHGEQLIADMLR 502
Query: 679 DSGEESEVEDLSDGSKQDKPLWEKIL 704
D EDLS + EK+L
Sbjct: 503 D-------EDLSPKEFMARDRIEKLL 521
>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
Length = 761
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 316/543 (58%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL TI P +++ ++ +A +A EAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEVLYQDLINTIRKYHPSDDITMIEKAYRIADEAHKEQKRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT ++T E++ +EFG+ V +V+G TK+++L K K E
Sbjct: 82 LEMDKETIAAGLLHDVVEDT-IMTLEQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++AD+LR+MFLAM +++RVII+KLADRLHNMRT + P KQ A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS + + Y + +VA E ++E + +ED
Sbjct: 195 DRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAFVQEIVDEVKSHMED---- 250
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+++ + K +SIYK ++ +++++ + +RI+++ +
Sbjct: 251 --AGIESTVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TVKD 296
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 297 CYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQIRT 348
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G V ++SWL I EW
Sbjct: 349 YEMHRTAEYGIAAHWKYKESGSGQVAAGSAEA-----------------KLSWLRQILEW 391
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + S+EF+ + DL V+ FTP G++K LP G+T +D+AY IH+ +GNK
Sbjct: 392 QRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVGNK 448
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV +V+ N + +EIIT S+++ + WL K+ A++KI ++
Sbjct: 449 MVGARVNGKLVPIEYVIQNGDQLEIIT-----SQNSKGPSRDWLGIVKSTQAKNKINQWF 503
Query: 658 REQ 660
+ Q
Sbjct: 504 KSQ 506
>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
9941]
Length = 742
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 300/511 (58%), Gaps = 59/511 (11%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
EL+ A LA AH GQ+RRSGEPFI+HP+ A IL +L +D +IAA LLHD +EDT V
Sbjct: 38 ELIAEAYNLAHAAHRGQRRRSGEPFILHPLATADILADLRMDPTTIAAALLHDVLEDTGV 97
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E + FGA V IV+G V+KL +L N +++ +A+ LR+M +AM+ +VRV
Sbjct: 98 -TKEELAGRFGAEVAEIVDG---VTKLKRLPSGN----LEEAQAESLRKMIVAMSRDVRV 149
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
II+KLADRLHNMRTL ++ Q ATETL+++APLA LG+Y +K ELE+L+F +
Sbjct: 150 IIIKLADRLHNMRTLEYLKRETQLEKATETLEIYAPLAHRLGIYSLKWELEDLAFATLHP 209
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
Y ++KR VA E E I + E ++L ++ E+R K YSIY
Sbjct: 210 RRYEEIKRLVAARRDEREA------FISARAAELKRYLSEAGIEAEVRGRVKHFYSIYNK 263
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+++ NE+ +A LR+I+ + CY LG++H +W PIP KDY
Sbjct: 264 MVRRNKEFNEIYDLAGLRVIV------------GSVRDCYGALGVIHSVWKPIPGRFKDY 311
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
IA PK N YQSLHTT++ E LE+QIRTEEMD AE GIAAH+ ++ G VG
Sbjct: 312 IAMPKFNMYQSLHTTVMS--NEGKL-LEIQIRTEEMDRTAEYGIAAHW---MYKEG-VGE 364
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
NGR A R++WL ++ EWQ+E ++ EF++ + +L V+
Sbjct: 365 ---NGR--------------ADRLAWLKSMMEWQQE---TSSALEFMEALKGELGADEVY 404
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VFTP+G++ +LP GAT +D+AY +HTE+G++ + AKVNG +V L + + VEIIT
Sbjct: 405 VFTPKGDVISLPSGATPIDFAYHVHTEVGHRCIGAKVNGRIVPLDSELVSGDRVEIITGK 464
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
+ S + WL K+ AR+KI ++
Sbjct: 465 SASPS------RDWLSVVKSGRARNKIRQYF 489
>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
Length = 737
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 302/521 (57%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S V++A A +AH Q R+SGEP+IIHP++VA IL EL +D +IA G LHD
Sbjct: 19 YMSDEHTAFVKKAYEYAVDAHKDQYRKSGEPYIIHPIQVAGILAELHMDPHTIAVGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T + ++ EFG V IV+G V+KLGK+K K+ + A++ R+M LA
Sbjct: 79 VVEDTDV-TLDDLKNEFGHDVAMIVDG---VTKLGKIKYKSHEEQL----AENYRKMLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+L
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLRDDKQRRIARETLEIYAPLADRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E EK +++A + + ED + + EI K
Sbjct: 191 SLRYLNPKQYYRIVHLMQSKRDEREKYVKQAVEEIRIATED------LDIYAEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ ++ + +E+ + +R+I+ + CY VLG +H W P+
Sbjct: 245 IYSVYRKMVDKKKQFDEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I + +E+QIRT +M IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSIHTTVIG---PNGNPVEIQIRTHQMHEIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G T + + ++ W + E Q+E + + +F++ + D
Sbjct: 348 ---------------EGHTEEIQPDEMTNQVGWFKELLELQDE---SFDASDFMEGVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK V AK+NG +V + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVSELPKGSGPLDFAYHIHTDIGNKTVGAKINGKMVQLDYNLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T S ++F + WL+ T A++KI +F + Q
Sbjct: 450 VEILT-----SPNSFGPSRDWLKFVATSKAKNKIKRFFKAQ 485
>gi|227879058|ref|ZP_03996948.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256843052|ref|ZP_05548540.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850296|ref|ZP_05555725.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|262046025|ref|ZP_06018989.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|293381310|ref|ZP_06627313.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|312977236|ref|ZP_07788984.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|423318875|ref|ZP_17296752.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
gi|227861353|gb|EEJ68982.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256614472|gb|EEU19673.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256712933|gb|EEU27925.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|260573984|gb|EEX30540.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|290922126|gb|EFD99125.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|310895667|gb|EFQ44733.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|405591738|gb|EKB65207.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
Length = 746
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 316/566 (55%), Gaps = 64/566 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K L+ + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LNELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVEQSTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W++ KT AR+KI ++ R Q + + + D +
Sbjct: 450 IEIMTQTNAAPSRD-------WVDMVKTSRARNKIRRYFRSQDREDSIQHGEQLIADMLR 502
Query: 679 DSGEESEVEDLSDGSKQDKPLWEKIL 704
D EDLS + EK+L
Sbjct: 503 D-------EDLSPKEFMARDRIEKLL 521
>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 309/545 (56%), Gaps = 56/545 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E L+ RA ++ H+GQ+R SGEP+I HPV VA +L +L IAAG LHD VEDT
Sbjct: 15 EQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDT 74
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IE EFG VR++VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 75 DV-TPETIEAEFGLEVRQLVEGVTKLSKF-NFSTKTER------EAENFRRMFLAMAQDI 126
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+PP KQ IA ET VFAPLA LG+++ K ELE+L+F Y
Sbjct: 127 RVIVVKLADRLHNMRTLEHLPPAKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYL 186
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ Y K+++ VAD + E+ +E+A IL ++E + + EI K +SI
Sbjct: 187 EPDTYRKMQQLVADKRTDREEHIEQAITILHDRLE-----PICSNHLEISGRPKHLFSIS 241
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + + +E+ +A +R+I+K + CY L +VH + PIP K
Sbjct: 242 QKMERQQKEFHEIYDVAAVRVIVKTN------------EECYRALAVVHDCFRPIPGRFK 289
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PK N YQSLHT +I LEVQIRTE M IAE GIAAH+
Sbjct: 290 DYIGLPKSNRYQSLHTVVIGLGGRP---LEVQIRTEAMHHIAEYGIAAHWK--------- 337
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ + P GKT + + +WL + EWQ + ++E++D + +L S
Sbjct: 338 --YKESSNQP-GKTAWSPDDE---KFTWLRQLLEWQSDL---KDAQEYLDNVKDNLFDSE 388
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G++ +L +GAT VD+AY IHTE+GN A+VNG +V+ L N ++VEI+T
Sbjct: 389 VYVFTPKGDLIDLTQGATPVDFAYRIHTEVGNHCFGARVNGRMVTLDTPLDNGDIVEIMT 448
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVADS 680
N+ WL A + +AR++I ++ RE+ L E+ +G D+
Sbjct: 449 QNSAHPSL------DWLNFAASNAARNRIRQWYKRSHREENILRGREMLEKALGKKGFDA 502
Query: 681 GEESE 685
+SE
Sbjct: 503 LLKSE 507
>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
Length = 779
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 320/561 (57%), Gaps = 76/561 (13%)
Query: 117 VSSDAFKED---------SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRR 166
VS+D + D SPE L E+L +I P+ ++ LV +A +A AH GQ R+
Sbjct: 13 VSADTLESDKIRSTKDFVSPEELHEELIRSIRRYHPSTDISLVEKAYHIAANAHKGQVRK 72
Query: 167 SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEG 226
SGE +IIHP+ VA IL +LE+D E+I AGLLHD EDT + T E + E+F V +V+G
Sbjct: 73 SGEEYIIHPLCVAIILADLEMDKETIVAGLLHDVAEDTGM-TLEELAEDFNDEVALLVDG 131
Query: 227 ETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP 286
TK+++L K E V+A++LR+MFLAM +++RVII+KLADRLHNMRTL M P
Sbjct: 132 VTKLNQLSYDADKIE------VQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMKP 185
Query: 287 HKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKE 346
KQ A ET++++AP+A+ LG+ IK ELE+LS Y E Y + ++A KE +
Sbjct: 186 EKQKEKARETMEIYAPIAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKERDAY 245
Query: 347 LEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
++ L+K+++ + ++ + K +SIYK ++ +++++ + +RII
Sbjct: 246 VDA----LVKQVK--STIAAADIEATVYGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRII 299
Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI--- 463
+K + CY LG++H +TP+P KDYIA PKPN YQSLHTTL+
Sbjct: 300 VK------------DVKDCYAALGVIHEHYTPVPGRFKDYIAMPKPNMYQSLHTTLMGPN 347
Query: 464 --PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
PF E+QIRTEEM E GIAAH+ + NG G+
Sbjct: 348 GQPF--------EIQIRTEEMHRTCEYGIAAHWKYK---------EANNGGGISGEEE-- 388
Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPK 579
++SWL I EWQ++ N EF+ + DL VF FTP G++K+LPK
Sbjct: 389 -------KLSWLRQILEWQQDMSDN---HEFMSLLKSDLDLFSDSVFCFTPNGDVKSLPK 438
Query: 580 GATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQ 639
G+T +D+AY IHT +GNKM+ AKVNG LV+ + + N + +EI+T S+++ +
Sbjct: 439 GSTPIDFAYSIHTAVGNKMIGAKVNGKLVTIDYEIRNGDRIEILT-----SQNSRGPSRD 493
Query: 640 WLEHAKTRSARHKIMKFLREQ 660
WL K+ A++KI ++ R +
Sbjct: 494 WLNIVKSTQAKNKINQWFRNE 514
>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
Length = 787
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 307/543 (56%), Gaps = 55/543 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D ++A+G LH
Sbjct: 63 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 122
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 123 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 174
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 175 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 234
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + K + D + +K EI K
Sbjct: 235 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 288
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 289 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 336
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 337 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 392
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + +F++++
Sbjct: 393 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 433
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y++HTE+GN V AKVNG +V +VL N +
Sbjct: 434 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 493
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+VE++T +S SA R W++ T AR+KI ++ ++ +E D + +
Sbjct: 494 IVEMLT----ASGSAPSR--DWIKLVFTSRARNKIKRYFKQADKSENAEKGRDMLERELL 547
Query: 679 DSG 681
D G
Sbjct: 548 DEG 550
>gi|383753776|ref|YP_005432679.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365828|dbj|BAL82656.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 739
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 311/538 (57%), Gaps = 55/538 (10%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
K+ +P + L+ SY ++ L+R+A LA EAH GQ R SGE +IIHP+ VA IL
Sbjct: 4 KDKAPVTIDSILQAVQSYEPKADVALIRKAYDLAVEAHKGQVRVSGEEYIIHPLHVAEIL 63
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
EL +D +I+A LLHD VEDT + T E+IEE FG V IV+G V+KLG++K K
Sbjct: 64 TELHIDDVTISAALLHDVVEDT-LYTKEQIEEMFGEEVAMIVDG---VTKLGRIKYK--- 116
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
S ++V+ ++ R+MFLAM +++RVI+VKLADRLHNMRTL +M KQ IA ET++++AP
Sbjct: 117 -SKEEVQLENYRKMFLAMAKDIRVIMVKLADRLHNMRTLKYMREDKQKRIAKETIEIYAP 175
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK ELE+L Y E Y + V KE + ++ A + + KI +
Sbjct: 176 LANRLGISNIKWELEDLCLRYLEPEKYYDLVENVKQKRKERQAFIDTAIEQIETKIGE-- 233
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+K EI+ K YSIYK +L+ + I+E+ ++ +R++++
Sbjct: 234 ----AGIKAEIKGRAKHFYSIYKKMLRDKKDISEIYDLSAIRVLVE------------SV 277
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY VLG++H +W PIP KDYIA PK NGYQSLHTT++ Y LE+QIRT M
Sbjct: 278 RDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTFHM 333
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
++E G+AAH+ + NG +G T + +++WL + Q+E
Sbjct: 334 HEVSEFGVAAHWK-----------YKENG---KGSTA---GGAMDQKMNWLRQMVSLQQE 376
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
+E+ + + D+ VFVFTP+G++ +LPKG+ +D+AY IHTE+G+ V AK
Sbjct: 377 L---SDPKEYFEALKVDIFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAK 433
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV H L N ++V IIT A + S + WL + R KI + +++
Sbjct: 434 VNGKLVPLEHKLKNGDIVSIITNKANNGPS-----RDWLNIVASSETRSKIRSWFKKE 486
>gi|328954063|ref|YP_004371397.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobacca acetoxidans DSM
11109]
gi|328454387|gb|AEB10216.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobacca acetoxidans DSM
11109]
Length = 717
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 312/536 (58%), Gaps = 62/536 (11%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
+S+ ++ L+++A + + +H+GQ R SG+P++ HP+EVA +L ++ LD S+A GL
Sbjct: 14 VLSHHPEADVSLIQKAYIFSARSHEGQTRLSGQPYLSHPLEVAYLLAQMGLDPVSVACGL 73
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHDTVEDTN + + ++E FG V I+ G TK+S++ K D +A+ +R+M
Sbjct: 74 LHDTVEDTNT-SLDDLDEIFGEEVTDIINGVTKISQISFDKKI-------DQQAEYIRKM 125
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
LAM ++RVI+VKLADR+HNMRTL +M P Q I+ ETL +FAPLA LGM +IK+EL
Sbjct: 126 ILAMAHDIRVILVKLADRVHNMRTLGYMKPESQKRISQETLDIFAPLAGRLGMGRIKAEL 185
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y E Y +++ +A E E+ ++E ++I+ +K+ + + E++
Sbjct: 186 EDLAFYYLEPEIYQQIQDGLARKRGEREQYIKEISEIINQKLGEHHLVG------EVKGR 239
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K Y IY+ ++ + S+++V + RI++K CY LGL+H +W
Sbjct: 240 PKHLYGIYRKMIAQQISLDQVYDLIAFRIVLKTLSE------------CYETLGLIHSLW 287
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT+I E R+E+QIRTE M+ IAE GIAAH++
Sbjct: 288 RPVPNRFKDYIAMPKANKYQSLHTTVIGPYGE---RMEIQIRTEGMNRIAEEGIAAHWAY 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ R + +N LR SWL I EWQ++ ++F++T+
Sbjct: 345 K----------------ERRQVQQDDN----LRFSWLRQIIEWQKDLT---NPQDFLNTV 381
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+L VFVFTP+G+IK LP+G+T VD+AY IHTE+G+ A+VNG +V + L +
Sbjct: 382 RMELYPEEVFVFTPKGQIKELPRGSTPVDFAYAIHTEVGHHCTGARVNGRMVPLKYELQH 441
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEI 668
+ VEIIT + WL+ +T AR KI ++L RE++ EI
Sbjct: 442 GDSVEIIT------SPTHVPSRDWLQFVRTTRARSKIRQWLKTAERERSVAFGKEI 491
>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
Length = 749
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 308/543 (56%), Gaps = 57/543 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V RA A +AH GQKR SG+P+IIHP +VA L L LD ++IAAG LHD
Sbjct: 22 YMNEDQVAFVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHD 81
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E +S Q+ A++ R+M +A
Sbjct: 82 TVEDT-PVTNDELKEKFGEDVSFIVDGVTKLNKY-------EYNSHQEFLAENHRKMLIA 133
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K +I K
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYISDTIKTLKKT------LDELGIKYDIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 351 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V A+VN LV + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGARVNNKLVPLDYKLRNGDV 452
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W + KT AR+KI ++ R Q + E V + +
Sbjct: 453 IEIMTQTNAAPSRD-------WADMVKTSRARNKIRRYFRGQDREESIEHGEQMVANTIR 505
Query: 679 DSG 681
D G
Sbjct: 506 DEG 508
>gi|227893456|ref|ZP_04011261.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
gi|227864735|gb|EEJ72156.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
Length = 749
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 305/543 (56%), Gaps = 57/543 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 22 YMNDKQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 81
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 82 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 133
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEAMHQVAEYGVAAHWAYK-- 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ + I E ++E + EF+ ++ D
Sbjct: 351 ---------------RGNFTGVQETTSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 452
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W++ KT AR+KI ++ R Q + E V D +
Sbjct: 453 IEIMTQTNAAPSRD-------WVDIVKTSRARNKIRRYFRGQDREDSIEHGQQMVADMLR 505
Query: 679 DSG 681
+ G
Sbjct: 506 EEG 508
>gi|357054508|ref|ZP_09115592.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
gi|355384480|gb|EHG31545.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
Length = 761
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 315/543 (58%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL TI P +++ ++ +A +A EAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEVLYQDLINTIRKYHPSDDITMIEKAYRIADEAHKEQKRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT ++T E++ +EFG+ V +V+G TK+++L K K E
Sbjct: 82 LEMDKETIAAGLLHDVVEDT-IMTLEQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++AD+LR+MFLAM +++RVII+KLADRLHNMRT + P KQ A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK EL++LS + + Y + +VA E ++E + +ED
Sbjct: 195 DRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAFVQEIVDEVKSHMED---- 250
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ + K +SIYK ++ +++++ + +RI+++ +
Sbjct: 251 --AGIEATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TVKD 296
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 297 CYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQIRT 348
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +G V ++SWL I EW
Sbjct: 349 YEMHRTAEYGIAAHWKYKESGSGQVAAGSAEA-----------------KLSWLRQILEW 391
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + S+EF+ + DL V+ FTP G++K LP G+T +D+AY IH+ +GNK
Sbjct: 392 QRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVGNK 448
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV +V+ N + +EIIT S+++ + WL K+ A++KI ++
Sbjct: 449 MVGARVNGKLVPIEYVIQNGDQLEIIT-----SQNSKGPSRDWLGIVKSTQAKNKINQWF 503
Query: 658 REQ 660
+ Q
Sbjct: 504 KSQ 506
>gi|424788484|ref|ZP_18215238.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
gi|422112705|gb|EKU16477.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
Length = 738
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TKKYLSPEDIALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN T + ++ EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDTNA-TLDDLDREFGHDVRGIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE +++KIE + ++ I
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVRKIE--TYASDRNLRGNIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----STNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|392429319|ref|YP_006470333.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
gi|419776206|ref|ZP_14302129.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|423071137|ref|ZP_17059912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|355364499|gb|EHG12231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|383846414|gb|EID83813.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|391758468|dbj|BAM24085.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
Length = 738
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TKKYLSPEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN T + ++ EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDTNA-TLDDLDREFGHDVRGIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE +++KIE + ++ I
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVRKIE--TYASDRNLRGNIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----STNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|399050755|ref|ZP_10740799.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|433545167|ref|ZP_20501527.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
gi|398051471|gb|EJL43793.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|432183556|gb|ELK41097.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
Length = 723
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 312/529 (58%), Gaps = 55/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ +YLS ++L+L+ RA LA +AH+GQ R+SG P+I+HP+ VA IL L +D +
Sbjct: 7 EVVKKASTYLSQSDLDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAAG LHD VEDT+V T + + E+FG V +V+G TK+ K+ K K K E A+
Sbjct: 67 IAAGFLHDVVEDTDV-TLDDLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M +AM +++RVI++KLADRLHNMRTL HM KQ I+ ETL++FAPLA LG+
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
+K ELE+ + Y N + Y ++ + E E L EA+ + +K+ + + ++
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSI+K + K NE+ + LRII+ + + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTKQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT+I E LEVQIRT +M AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK+V + A ++ L I E E N ++E
Sbjct: 338 AHWAYK-----------------EGKSVV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ +DL VFVFTP+G++ LPKG+ +D++Y IH+ +GN+ + AKVNG +V
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ + ++VEI+T SK ++ + WL+ AK+ AR+KI ++ +++
Sbjct: 437 YAMKTGDIVEILT-----SKHSYGPSQDWLKMAKSAHARNKIKQWFKKE 480
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 301/515 (58%), Gaps = 53/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E++++A A +AH QKR SGEP+IIHP++VA IL EL +D +IAAGLLHD +EDT
Sbjct: 17 DVEMIKKAYFFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++E ++ F + +V G V+KLGK++ K + ++ +AD++R+M LAM +++
Sbjct: 77 -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ A ETL ++APLA LGM +IK ELE+LSF Y
Sbjct: 129 RVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y K+ ++A+ E E + E L +K LD + ++I K YSIY
Sbjct: 189 HEDEYYKLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +RI L + + CY VLG+VH I+ PIP K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ ++ K + ++ WL + EWQ+E + EF++ DL
Sbjct: 339 --YKEGDKNEEDKV-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT+IGNK V AKVNG +V + L E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
S ++ + WL AK+ ++ KI ++ ++
Sbjct: 449 -----SSNSKGPNMDWLNVAKSNQSKSKIKQWFKK 478
>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
Length = 746
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 308/543 (56%), Gaps = 57/543 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V RA A +AH GQKR SG+P+IIHP +VA L L LD ++IAAG LHD
Sbjct: 19 YMNEDQVAFVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E +S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYNSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K +I K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYISDTIKTLKKT------LDELGIKYDIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V A+VN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGARVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+EI+T NA S+ W + KT AR+KI ++ R Q + E V + +
Sbjct: 450 IEIMTQTNAAPSRD-------WADMVKTSRARNKIRRYFRGQDREESIEHGEQMVANTIR 502
Query: 679 DSG 681
D G
Sbjct: 503 DEG 505
>gi|310778489|ref|YP_003966822.1| (p)ppGpp synthetase I SpoT/RelA [Ilyobacter polytropus DSM 2926]
gi|309747812|gb|ADO82474.1| (p)ppGpp synthetase I, SpoT/RelA [Ilyobacter polytropus DSM 2926]
Length = 718
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/526 (40%), Positives = 311/526 (59%), Gaps = 68/526 (12%)
Query: 141 LSPNELELVRRALMLAFE----AHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
+ N L++ ++LA+E H GQ R+SG+ +IIHP+EV++IL +++D ++I AG+
Sbjct: 11 IKKNNLKVDTDKILLAYEFAKECHVGQFRKSGDEYIIHPIEVSKILINMKMDTDTIVAGI 70
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK-LKCKNENHSVQDVKADDLRQ 255
LHD VEDT ++T IE FG +V ++V+G TK+S L K K ++EN +R+
Sbjct: 71 LHDIVEDT-LITVSDIEYNFGNSVAKLVDGVTKLSVLPKGTKKQHEN----------IRK 119
Query: 256 MFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSE 315
M +AM +++RV+I+KLADRLHNMRTL +MP HKQ I+ ETL++FAPLA LGM IK E
Sbjct: 120 MIVAMAQDIRVVIIKLADRLHNMRTLKYMPAHKQERISRETLEIFAPLAHRLGMAMIKCE 179
Query: 316 LENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRS 375
LE+LS Y E Y ++ + + E EK E K E ++FL +K E+
Sbjct: 180 LEDLSLYYLEPEIYRELVKLINSKKAEREKYTEATKK------EIEKFLLENNIKGEVSG 233
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
K YSIYK + + +E+ + LRII++ + CY+VLG++HG
Sbjct: 234 RPKHFYSIYKKMYEKGKEFDEIYDLIALRIIVE------------TEGECYNVLGVLHGN 281
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
+ P+P KDYIA PK NGYQS+HTT++ P + F +EVQIRTEEM IAE G+AAH+
Sbjct: 282 YKPVPGRFKDYIAVPKSNGYQSIHTTIVGP---QGKF-IEVQIRTEEMHGIAEEGVAAHW 337
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
S + RGK ++ SWL I EWQ+E S EFV
Sbjct: 338 SYK----------------ERGKVTKKDHV-----YSWLRQILEWQQE---ADNSEEFVK 373
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
T+T D+L VFVF+P+G++ L GAT +D+A+ IHTEIG K V AK+N +V + L
Sbjct: 374 TVTGDILHETVFVFSPKGDVVELAYGATPLDFAFHIHTEIGLKCVGAKINDRIVPIDYKL 433
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
N + VE+IT S++A WL+ T+SA+ KI K+++++
Sbjct: 434 QNGDKVEVIT-----SRNAKGPGNDWLDIVVTQSAKSKIRKWIKDK 474
>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
Length = 742
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 307/543 (56%), Gaps = 55/543 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D ++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + +F++++
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y++HTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+VE++T +S SA R W++ T AR+KI ++ ++ +E D + +
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVFTSRARNKIKRYFKQADKSENAEKGRDMLERELL 502
Query: 679 DSG 681
D G
Sbjct: 503 DEG 505
>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
Length = 742
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 307/543 (56%), Gaps = 55/543 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D ++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALTD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + +F++++
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y++HTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+VE++T +S SA R W++ T AR+KI ++ ++ +E D + +
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVFTSRARNKIKRYFKQADKSENAEKGRDMLERELL 502
Query: 679 DSG 681
D G
Sbjct: 503 DEG 505
>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
Length = 742
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 307/543 (56%), Gaps = 55/543 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D ++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + +F++++
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y++HTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+VE++T +S SA R W++ T AR+KI ++ ++ +E D + +
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVFTSRARNKIKRYFKQADKSENAEKGRDMLERELL 502
Query: 679 DSG 681
D G
Sbjct: 503 DEG 505
>gi|431794423|ref|YP_007221328.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784649|gb|AGA69932.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 729
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 302/519 (58%), Gaps = 55/519 (10%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
SP ++LV +A A EAH GQ R SGE +I HP+EVA+IL ELE+D +IAA LHD V
Sbjct: 14 SPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVV 73
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT + E IE+EFG+ V +V+G V+KLG+++ K S ++++ ++LR+MFLAM
Sbjct: 74 EDTKY-SVEDIEKEFGSQVALLVDG---VTKLGRIEYK----SKEELQVENLRKMFLAMA 125
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI++KLADRLHNMRTL KQ IA ET+++FAPLA LG+++IK ELE+LSF
Sbjct: 126 KDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSF 185
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y ++Y + +A E E ++ E L ++ + + ++ +I K Y
Sbjct: 186 RYLKPQEYYDLSEGIALKRAEREVQINEVITQLRSRLSE------VGIRADISGRPKHFY 239
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY+ ++ ++E+ + +R+I+ CY LG++H +W P+P
Sbjct: 240 SIYRKMINQHKELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTLWKPLPG 287
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYIA PKPN YQSLHTTL+ E E+QIRT EM AE GIAAH+ +
Sbjct: 288 RFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK---- 340
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G RP G N ++SWL + EWQ + + + EF++++ DL
Sbjct: 341 --EGAGRPAG------------GNFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLF 383
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ LP G+ VD+AY +HT++G++ V AK+N +V L N ++VE
Sbjct: 384 ADTVFVFTPKGDVVELPAGSCPVDFAYRVHTDVGHRCVGAKINSRIVPLETKLTNGDIVE 443
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
I+T SK + WL KT A+++I + +++
Sbjct: 444 ILT-----SKQGNGPSRDWLSFVKTSQAKNRIRGWFKKE 477
>gi|418045100|ref|ZP_12683196.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
gi|351678182|gb|EHA61329.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
Length = 714
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 300/523 (57%), Gaps = 57/523 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
+ E +L+ +A A H+GQKR SGEPFI HPVEV +IL L +D ++ A LLHD
Sbjct: 26 FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 85
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VED V+ ++I++EFG V RIV+G TKVS + ++++ K + +++MF AM
Sbjct: 86 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 142
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMP-PHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ P K+ A ETL+++APLA LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 202
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y K+K VA+ KE EK E +L +E+ + +K + K
Sbjct: 203 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 256
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + E+ + LR+I+K CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMKEKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 304
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHTT+I E LE+QIR EEM AE G+ AH+
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RP+ ++ + W+ + +W++E T EF D I ++
Sbjct: 357 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKG+T +D+AY IHTEIG+ AKVNG +V + L N +V
Sbjct: 395 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VEII S WL++AKT SAR KI +FL+E+ A
Sbjct: 455 VEIIVNKNSPGPSV-----DWLKYAKTHSARAKIRRFLKEKLA 492
>gi|374300791|ref|YP_005052430.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
gi|332553727|gb|EGJ50771.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
Length = 716
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/537 (40%), Positives = 313/537 (58%), Gaps = 68/537 (12%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E + +SY + L+++A + A AH GQ R SGEP++ HP+EVA IL ++ LD
Sbjct: 3 RIHEIIDKVLSYHPEPNVALIQKAYVFAAAAHAGQTRLSGEPYMSHPLEVANILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I + LLHDTVEDT T + IE +FG V IV+G TK+SK+ + K +
Sbjct: 63 EFAIVSALLHDTVEDTKA-TVDEIESKFGKEVAHIVDGVTKISKM-TFETKAQ------A 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M +AM E++RVI++KLADRLHNMRTL KQ IA ETL ++APLA LG
Sbjct: 115 QAENIRKMIVAMAEDIRVIMIKLADRLHNMRTLDFQKSEKQKRIAQETLDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM- 367
++ IK+ELE+L FMYT + Y ++K+ V EH +++ ++ + K I D D++
Sbjct: 175 LHFIKTELEDLCFMYTRPDAYGQLKKGV-----EHYQDI--GHEYIAKVI--DLLNDMLG 225
Query: 368 --TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+K + K YSI+ +L+ ++++V + R+I+ S + C
Sbjct: 226 RNKIKGRVLGRTKHLYSIHNKMLQQSLTLDQVYDLMAFRVIV------------STIRDC 273
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG VH IW P+P KDYI+ PKPN YQSLHTT+I E R+E+QIRTEEM +
Sbjct: 274 YAVLGEVHSIWKPVPGRFKDYISMPKPNMYQSLHTTVIGPDGE---RIEIQIRTEEMHRL 330
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE G+AAH+ + G PR R SWL I +WQ+E
Sbjct: 331 AEYGVAAHWQ----------YKEGGGGKPRD----------VERFSWLREILDWQKE--- 367
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
REF+ ++ DL +V+VFTPRG++K+LP+GAT VD+AYM+H+E+G+ AKVNG
Sbjct: 368 TRDPREFMRSLRVDLSEDQVYVFTPRGDVKSLPEGATPVDFAYMVHSEVGDHCAGAKVNG 427
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
LV + L N + VE+IT QRH + WL++ K+ A +I F+R +
Sbjct: 428 RLVPLSTKLKNGDTVEVIT--------DAQRHPSRDWLKYVKSGKAIQRIKYFIRTE 476
>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 722
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/544 (38%), Positives = 320/544 (58%), Gaps = 75/544 (13%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D E+L E ++ Y + ++ L+++A A + HDGQ+R SGEP+I+HP+EVA IL +
Sbjct: 3 DKFEQLIEKVK---KYATEEDVNLIKKAYEFAKKYHDGQERSSGEPYIVHPLEVALILAD 59
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD SI AGLLHD VEDT+ + + IE+EFG + +V+G V+KLGKL E S
Sbjct: 60 LELDIASIVAGLLHDVVEDTSA-SPQEIEQEFGGEIASLVDG---VTKLGKL----EFTS 111
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ +A++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA
Sbjct: 112 KLEQQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 171
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK ELE+L+ Y + E Y + ++A E E+ ++ ++ +K+++
Sbjct: 172 HRLGISKIKWELEDLALRYLDPEGYYDLVEKIAKKRVEREEYIQRIINLISEKLKE---- 227
Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
E+ + P YSIY+ + + ++ E+ + +RII+ +
Sbjct: 228 ----ANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIV------------NS 271
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
+ CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQ
Sbjct: 272 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 323
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT +M AE GIAAH+ + GR + + + + +WL +
Sbjct: 324 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 363
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
EWQ+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 364 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 420
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI +
Sbjct: 421 KMAGAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAW 475
Query: 657 LREQ 660
+++
Sbjct: 476 FKKE 479
>gi|408791615|ref|ZP_11203225.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408463025|gb|EKJ86750.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 684
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 307/519 (59%), Gaps = 49/519 (9%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
L P + L+ +A +A + H+GQKR SGEP+IIHP+ VA +L EL LD +IAAGLLHD
Sbjct: 21 LGPEKATLIEKAYHIADKMHEGQKRLSGEPYIIHPMNVASVLDELGLDERAIAAGLLHDV 80
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VEDT+ + E + EFG + +VEG TK+S++ ++ S + A+++R+M LA
Sbjct: 81 VEDTSY-SKEDMAREFGEDIAALVEGVTKISEI-------KSQSKETEAAENIRKMLLAT 132
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
++VRV+++KLAD+ HN+RTL P KQ IA E L ++AP+A LG+Y++K ELE+L+
Sbjct: 133 IKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLYAPIAGRLGVYKVKFELEDLA 192
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F + E+Y ++K+RV+ E ++ +E+ KI++K Q L +++ I K
Sbjct: 193 FQSLHPEEYQEIKKRVSAKKSERDEYIEKI-KIILK-----QRLAEISIDARIDGRAKHF 246
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
YSIY+ ++ S +E+ + +RII + + CY VLG+VH +WTPIP
Sbjct: 247 YSIYRKMVTKEKSFSEIFDLRAVRII------------TNEIKDCYGVLGIVHTLWTPIP 294
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYIATPK N YQSLHTT+ M EVQIRT++M+ IAE G+AAH++
Sbjct: 295 GRFKDYIATPKTNLYQSLHTTVFGPDGRPM---EVQIRTKDMNAIAENGVAAHWA----- 346
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ + + + N A R+ WL ++ WQ+ ++ S+EF++ + DL
Sbjct: 347 ------YKESTNLSKTSVILQNGVENAFRMKWLEILKSWQDP---SLDSKEFMEELQYDL 397
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
VFVFTP+GEI +PKGATV+DYA+ IHT++G KVNG +V+ L + + V
Sbjct: 398 HEDEVFVFTPKGEIIEMPKGATVLDYAFRIHTDVGLHARGGKVNGRMVTLRTELKSGDQV 457
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
EIIT SSK + WL KT AR K+ + R+
Sbjct: 458 EIITEK--SSKPS----PIWLRIVKTSGARQKLRAYFRK 490
>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
Length = 742
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 307/543 (56%), Gaps = 55/543 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D ++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDTNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEIEKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + +F++++
Sbjct: 348 ----------------EGQTSKVEYDKTGKKLDIFREILELQDE---TSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y++HTE+GN V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLVHTEVGNHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
+VE++T +S SA R W++ T AR+KI ++ ++ +E D + +
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVFTSRARNKIKRYFKQADKSENAEKGRDMLERELL 502
Query: 679 DSG 681
D G
Sbjct: 503 DEG 505
>gi|313891053|ref|ZP_07824672.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|416852055|ref|ZP_11909200.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313120416|gb|EFR43536.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|356739544|gb|EHI64776.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 739
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 312/523 (59%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ N++ V++AL A AH Q R+SGEP+IIHP++VA IL +L+LD ++A G LH
Sbjct: 18 AYMNHNDVAFVKKALDYATAAHYYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG+ VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDNIEMDFGSDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
L+F Y N ++ K+ + + +E E ++E +KI+ E + D+ I
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDEIVDKIISYTREQGLYGDVYGRPKHI---- 245
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
YSIY+ + + +++ + +R +++ Q Y ++G +H +W
Sbjct: 246 ---YSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK 346
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
V G V S + V +N W+N + E Q+ N +++FVD++
Sbjct: 347 KGVKGKV--------SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 388 EDIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGKMVPLTAKLKTG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 448 DVVEIVT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQ 485
>gi|385813969|ref|YP_005850362.1| PpGpp synthetase [Lactobacillus helveticus H10]
gi|323466688|gb|ADX70375.1| PpGpp synthetase [Lactobacillus helveticus H10]
Length = 749
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 314/565 (55%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD ++I AG LHD
Sbjct: 22 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 81
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 82 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 133
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 193
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 194 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W PI
Sbjct: 248 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPI 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 351 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LP G+ +D+AY IHT++GN V AKVN LV + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPNGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 452
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T +++ + W + KT AR+KI ++ R Q + E + + + +
Sbjct: 453 IEIMT------QASAAPSRDWADMVKTSRARNKIRRYFRSQDREESIERGEQMIANMIRE 506
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
E L+ DK EKIL
Sbjct: 507 -------EALAPKDFMDKDHIEKIL 524
>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 726
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/544 (38%), Positives = 316/544 (58%), Gaps = 72/544 (13%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D ++L E + Y S ++ L+++A A + HDGQ R SGEP+I+HP+EVA IL +
Sbjct: 4 DLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQSRNSGEPYILHPLEVALILAD 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD SI AGLLHD VEDT+ + E +E EFG + +V+G V+KLGKL E S
Sbjct: 64 LELDIPSIVAGLLHDVVEDTSA-SLEDVEREFGKEIAELVDG---VTKLGKL----EFTS 115
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ + ++ R+M +AM +++RVI++KLADRLHNMRTL ++PP KQ A ET+ ++APLA
Sbjct: 116 KLERQVENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK ELE+LS Y + E Y + ++A E E+ ++ ++ +K+++
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKE---- 231
Query: 365 DLMTVKTEIRSVCKEP---YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
E+ + P YSIY+ + + ++ E+ + +RII+ +
Sbjct: 232 ----ANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV------------NS 275
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQ 476
+ CY VLG++H ++ P+P KDYIA PKPN YQSLHTT+I PF EVQ
Sbjct: 276 VKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPF--------EVQ 327
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT +M AE GIAAH+ + GR + + + + +WL +
Sbjct: 328 IRTFDMHRTAEYGIAAHWKYK------------EGR--------IKSTDEDEKFAWLREL 367
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
EWQ+E ++EF++++ +L VFVFTP+G++ +LP+G+T +D+AY IH+EIGN
Sbjct: 368 LEWQKEL---KDAKEFMESLKINLFSDEVFVFTPKGDVISLPQGSTPIDFAYAIHSEIGN 424
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KM AKVNG LV + L N ++VEIIT + S + WL+ K+ A+ KI +
Sbjct: 425 KMAGAKVNGKLVPIDYELKNGDIVEIITSPNVHGPS-----QDWLKIVKSPQAKSKINAW 479
Query: 657 LREQ 660
+++
Sbjct: 480 FKKE 483
>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
Length = 760
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 302/521 (57%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 37 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 96
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VED N+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 97 DVVEDKNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 148
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 149 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 208
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 209 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 262
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 263 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 310
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 311 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 366
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E ++E + + +F++++
Sbjct: 367 ----------------EGQTSKVQYDKAGKKLDIFREILELEDE---SSDAADFMESVKG 407
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+GN V AKVNG +V +VL N +
Sbjct: 408 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVGNHTVGAKVNGKIVPLNYVLKNGD 467
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 468 IVEMLT----ASGSAPSR--DWIKLVYTSRARNKIKRYFKQ 502
>gi|358051528|ref|ZP_09145719.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
gi|357258969|gb|EHJ08835.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
Length = 729
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 311/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSAHEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E EE + + KI + ++ M +
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREEYIEKAIDKISTE--MERMQIAG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +R+I+ + CY VLGL
Sbjct: 237 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAVLGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GKTV + + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKTVNEKDQSYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YMLQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|325568309|ref|ZP_08144676.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|420264623|ref|ZP_14767252.1| GTP diphosphokinase [Enterococcus sp. C1]
gi|325158078|gb|EGC70231.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|394767937|gb|EJF48167.1| GTP diphosphokinase [Enterococcus sp. C1]
Length = 736
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 303/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S + V++AL A EAH Q R+SGEP+IIHP++VA IL EL++D ++A G LHD
Sbjct: 19 YMSEEHVAFVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T ++EEFGA V +V+G V+KLGK+K K+ + A++ R+M +A
Sbjct: 79 VVEDTDV-TLADLKEEFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL H+ KQ IA ET++++APLA LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E E + E + + E+ + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREERESYVSETVEEIRIATEE------LDIYAEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +R+I+ + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I +E+QIRT EM IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT + + ++ W I E Q+E + + EF++ + D
Sbjct: 348 ---------------EGKTEKVRADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+G++ LP+G++ +D+AY IHT+IGNK AKVNG +V + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T S ++F + W++ T A++KI +F + Q
Sbjct: 450 IEILT-----SPNSFGPSRDWVKLVATSKAKNKIKRFFKAQ 485
>gi|417933627|ref|ZP_12576947.1| RelA/SpoT family protein [Streptococcus mitis bv. 2 str. F0392]
gi|340770197|gb|EGR92712.1| RelA/SpoT family protein [Streptococcus mitis bv. 2 str. F0392]
Length = 738
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E+EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDT-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 299/532 (56%), Gaps = 65/532 (12%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+L++RA + + AH+GQ R SGEP++ HP+ VA++L ++ LD ++AAGLLH
Sbjct: 13 SYIDDPDLDLIQRAYVFSARAHEGQVRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT+ T + I + FG V IV+G TK+S + + S KA+++R+M L
Sbjct: 73 DTVEDTDT-TIDEIADLFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMIL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV++VKLADRLHNMRTL +KQ IA ET+ +++PLA LG+Y +K +LE+
Sbjct: 125 AMAEDIRVLMVKLADRLHNMRTLDFQKSYKQLLIAQETMDIYSPLANRLGLYMVKRDLED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-----DQFLDLMTVKTEI 373
L Y D+Y++ LE + I + +++ + LD +K I
Sbjct: 185 LCLYYLK-----------PDVYQDITDGLERQHTIGKEYVDNVIGLLNGILDNNEIKGTI 233
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSI+K + + S+++V I R+I++ + CY VLGLVH
Sbjct: 234 YGRTKHIYSIHKKMQRQNLSLDQVYDIIAFRVIVE------------SVKDCYSVLGLVH 281
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W PI KDYI+ PK N YQSLHTT+I E R+E+QIRTEEM +AE G+AAH
Sbjct: 282 SMWKPISGKFKDYISIPKANMYQSLHTTVIGPEGE---RIEIQIRTEEMQQVAEYGVAAH 338
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ + +GRS + A R SWL I +WQ E REF+
Sbjct: 339 W-----------QYKESGRSDSKQN------RDAERFSWLRQIMDWQREL---EDPREFM 378
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
++ DL V+VFTP GEIK LP GAT VD+AY IHTE+GN AKVNG +V V
Sbjct: 379 ASLRFDLFNDEVYVFTPTGEIKELPDGATPVDFAYSIHTEVGNHCTGAKVNGRMVPLNSV 438
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSA 665
L N + +E+ T + + WL+ KT AR +I ++R + S+
Sbjct: 439 LKNGDTIEVFT------DKKRKPSRDWLKFVKTAKARTRIKHYIRTEERTSS 484
>gi|300088447|ref|YP_003758969.1| (p)ppGpp synthetase I [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528180|gb|ADJ26648.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 733
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 305/528 (57%), Gaps = 54/528 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL P +L +++ A A EAH GQ RRSGEP+I HP+ VA L +L+LD +IAA LLHD
Sbjct: 13 YLPPEKLNIIQAAYDFAAEAHQGQTRRSGEPYIEHPLAVAMELADLQLDTTAIAAALLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL---GKLKCKNENHSVQDVKADDLRQM 256
ED+++ IEE+FG V R+V+G TK++KL + + ++ + +A++LR+M
Sbjct: 73 VPEDSDI-PLAGIEEKFGPDVARLVDGVTKLAKLSLAAPGETRFSGNTTYERQAENLRKM 131
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM E++RV+ +KL+DRLHNMRTL MP KQ IA ET++++APLA LG+++IK +L
Sbjct: 132 LVAMAEDLRVVFIKLSDRLHNMRTLDAMPSEKQKDIARETMEIYAPLAHRLGIWEIKWQL 191
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF + Y ++ R +A + E+ + + IL + E+ +K E+
Sbjct: 192 EDLSFRFLEPVRYKQLARLIAGKRAQREEFITKVINILKSEFEN------AGLKPEVNGR 245
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K +S+++ K ++I L + L + CY LG VH +W
Sbjct: 246 AKHIFSLHQKAEKYSAQGRHFDEIYDLL---------AIRVLVNTVNECYTALGAVHNLW 296
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP + DYIA PKPNGYQSLHT ++ + LE+QIRT +M +AE G+AAH+
Sbjct: 297 HPIPGSFDDYIANPKPNGYQSLHTAVLSL---NGTPLEIQIRTYDMHRLAEYGVAAHW-- 351
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ N RS +N + RISWL + +W + G + EF++++
Sbjct: 352 ---------RYKENERSTS------HNED---RISWLRQLVDWHRDLAG---AEEFLESV 390
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ +VFVFTP GEIK+LPKGAT +D+AY +HTE+G++ V AKVNG LVS + L N
Sbjct: 391 KTDIFNDQVFVFTPGGEIKDLPKGATPLDFAYRVHTELGHRCVGAKVNGKLVSLDYQLKN 450
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 660
AEVVEI+T S + WL + KT A KI ++ ++Q
Sbjct: 451 AEVVEIVTTRKNKGPS-----RDWLNPNLGYVKTSHAITKIRQWFKKQ 493
>gi|390956366|ref|YP_006420123.1| RelA/SpoT family (p)ppGpp synthetase [Terriglobus roseus DSM 18391]
gi|390411284|gb|AFL86788.1| (p)ppGpp synthetase, RelA/SpoT family [Terriglobus roseus DSM
18391]
Length = 876
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 303/527 (57%), Gaps = 56/527 (10%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
++L++VR A H+GQKR SGEP+IIHP+EV ++L E+++D +IAAGLLHD VED
Sbjct: 136 DDLDIVRAAWQFCMAQHEGQKRASGEPYIIHPLEVGQVLAEMKMDSTAIAAGLLHDAVED 195
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T V T E I FG V IV+G V+KL ++K N+ +D +A+++R+M LAM +
Sbjct: 196 TPVST-EEISRRFGPQVAHIVDG---VTKLDRIKFANK----EDHQAENIRKMLLAMVSD 247
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RV+++K+ADRLHNMRTL H+ P KQ IA ETL ++APLA LGM +++ E E+L+F Y
Sbjct: 248 IRVVLIKMADRLHNMRTLGHLKPEKQQRIARETLDIYAPLAHRLGMGKLRGEFEDLAFQY 307
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
+ + K+ + V +L + E N + ++E L + + K YSI
Sbjct: 308 VDPARFLKLAQDV-ELVRNRGGEEFLDNIVARFQLE----LTRHGLPGRVEYRIKRLYSI 362
Query: 384 YKAVL--KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
+ ++ ++G ++++Q+ L V + Q CY +LGL+H IW P+P
Sbjct: 363 NQKLVADAAQGGDDDISQVHDL---------FAVRVITQTVQDCYAILGLLHSIWRPVPG 413
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
+KD+IA P+PN YQSLHTTL+ E ++ EVQIRTEEM IAE GIAAH+ +
Sbjct: 414 RIKDFIAMPRPNLYQSLHTTLV---AEGGYQFEVQIRTEEMHRIAEDGIAAHWKYKA--- 467
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
++V NA R++W+ + EWQ E EF+ T+ DL
Sbjct: 468 --------------NESV---NAKDEQRLAWVRQLMEWQREMT---DPNEFMSTLKIDLY 507
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
V+ FTP+G++ LPK A+ +D+AY IHTE+G+ V AKVNG +V H L N ++VE
Sbjct: 508 PEEVYTFTPKGKVVVLPKDASPIDFAYTIHTEVGHSTVGAKVNGRIVPLRHRLRNGDIVE 567
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
I T ++ + WL K+ AR+KI +L E A EI
Sbjct: 568 ITT------QTGHTPSRDWLSFVKSSRARNKIKHWLNEHQRERAIEI 608
>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
Length = 745
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 304/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S + V++AL A AH+GQ R+SGEP+IIHP++VA IL EL++D ++A G LHD
Sbjct: 27 YMSAEHVAFVQKALDYATSAHEGQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 86
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T + + EEFG V +V+G V+KLGK+K K+ + A++ R+M +A
Sbjct: 87 VVEDTDV-TLQDLTEEFGPDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 138
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL H+ KQ IA ETL ++APLA LG+ +IK ELE+
Sbjct: 139 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIARETLDIYAPLAHRLGISRIKWELEDR 198
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E +++ + L E+ + + EI K
Sbjct: 199 SLRYINPQQYYRIVHLMKTKRDEREAYVDKTVEELRIATEE------LDIYAEIYGRPKH 252
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ + +E+ + +R+I+ + CY VLG +H W P+
Sbjct: 253 IYSIYRKMVDKKKQFDEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 300
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + +E+QIRT EM IAE G+AAH++ +
Sbjct: 301 PGRFKDYIAMPKANMYQSLHTTVIG---PNGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 355
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT +N + ++ W I E ++E + + +F++ + D
Sbjct: 356 ---------------EGKTDKVNPDQMTEQVGWFKEILELKDE---SYDASDFMEGVKGD 397
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP G++ LP+G++ +D+AY IHT+IGNK V AK+NG +V + L N ++
Sbjct: 398 IFSDKVYVFTPNGDVSELPQGSSPLDFAYNIHTDIGNKTVGAKINGKMVQLDYKLKNGDI 457
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T S ++F + WL+ T A++KI +F + Q
Sbjct: 458 VEIMT-----SPNSFGPSRDWLKLVATSKAKNKIKRFFKTQ 493
>gi|449960124|ref|ZP_21810516.1| putative stringent response protein [Streptococcus mutans 4VF1]
gi|450139804|ref|ZP_21872676.1| putative stringent response protein [Streptococcus mutans NLML1]
gi|449167983|gb|EMB70830.1| putative stringent response protein [Streptococcus mutans 4VF1]
gi|449232522|gb|EMC31631.1| putative stringent response protein [Streptococcus mutans NLML1]
Length = 740
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYAEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|449965934|ref|ZP_21812121.1| putative stringent response protein [Streptococcus mutans 15VF2]
gi|449170755|gb|EMB73450.1| putative stringent response protein [Streptococcus mutans 15VF2]
Length = 740
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|257866975|ref|ZP_05646628.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257873309|ref|ZP_05652962.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257877051|ref|ZP_05656704.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
gi|257801031|gb|EEV29961.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257807473|gb|EEV36295.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257811217|gb|EEV40037.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
Length = 736
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 303/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S + V++AL A EAH Q R+SGEP+IIHP++VA IL EL++D ++A G LHD
Sbjct: 19 YMSEEHVAFVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T ++EEFGA V +V+G V+KLGK+K K+ + A++ R+M +A
Sbjct: 79 VVEDTDV-TLADLKEEFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL H+ KQ IA ET++++APLA LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E E + E + + E+ + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREERESYVSETVEEIRIATEE------LDIYAEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +R+I+ + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I +E+QIRT EM IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT + + ++ W I E Q+E + + EF++ + D
Sbjct: 348 ---------------EGKTEKVRADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+G++ LP+G++ +D+AY IHT+IGNK AKVNG +V + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T S ++F + W++ T A++KI +F + Q
Sbjct: 450 IEILT-----SPNSFGPSRDWVKLVATSKAKNKIKRFFKAQ 485
>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
QYMF]
Length = 727
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/537 (38%), Positives = 311/537 (57%), Gaps = 66/537 (12%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ E+L I +P + EL+ RA AH GQ R+SGE + IHPVEVA+IL EL++D
Sbjct: 1 MLENLIAKIEEYNPQCDAELIIRAYHYGENAHQGQYRKSGEQYFIHPVEVAKILIELKMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAAGLLHD +EDT + ++ EEFG V +VEG TK+++L S ++
Sbjct: 61 SSTIAAGLLHDVIEDTPY-GYGKVREEFGEEVAELVEGVTKLTRLS-------FESKEER 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++LR+MF+AM +++RV+++KLADRLHNMRTL + K+ A ETL++FAP+A LG
Sbjct: 113 QAENLRKMFIAMAKDIRVVLIKLADRLHNMRTLKYQSDEKKKEKAMETLEIFAPIAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+L +Y + E Y + +VA ++ E + + IL D +D
Sbjct: 173 ISRIKWELEDLCLLYIDPEGYYDLVDKVAKKRRDRETFINKVISIL------DGKMDEFG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ EI K YSIY+ ++ S +E+ R+I+ + + CY +
Sbjct: 227 IENEISGRPKHFYSIYRKMVYQNKSFDEIFDFIAFRVIV------------NNVKDCYGI 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+VH +W PIP KDYIA PKPN YQSLHTT+I PF E+QIRT+EM
Sbjct: 275 LGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGEPF--------EIQIRTKEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
IAE GIAAH+S + GK++ N ++ +++WL + EW+++
Sbjct: 327 QIAEFGIAAHWSYK-----------------EGKSIN-NEDDMDTKLTWLRQMLEWEKD- 367
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+EF+ ++ DL + VFVFTP+GE+ NLP G+T +D+AY IH+++GNK V AKV
Sbjct: 368 --TKDPKEFMASLKVDLYTNEVFVFTPKGEVINLPSGSTPIDFAYKIHSDVGNKCVGAKV 425
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ +V + L N +VEI+T S + + WL+ K+ A KI ++ +++
Sbjct: 426 DSRMVPIDYKLKNGNIVEILT-----SSQSVGPSRDWLKIVKSSQASTKIKQWFKKE 477
>gi|15643492|ref|NP_228538.1| (p)ppGpp synthetase [Thermotoga maritima MSB8]
gi|4981255|gb|AAD35811.1|AE001744_1 (p)ppGpp synthetase [Thermotoga maritima MSB8]
Length = 751
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 300/523 (57%), Gaps = 57/523 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
+ E +L+ +A A H+GQKR SGEPFI HPVEV +IL L +D ++ A LLHD
Sbjct: 63 FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 122
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VED V+ ++I++EFG V RIV+G TKVS + ++++ K + +++MF AM
Sbjct: 123 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 179
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMP-PHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ P K+ A ETL+++APLA LG+Y IKSELE+L
Sbjct: 180 AEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 239
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y K+K VA+ KE EK E +L +E+ + +K + K
Sbjct: 240 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 293
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + E+ + LR+I+K CY VLG+VH IW P+
Sbjct: 294 YYSIWRKMKEKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 341
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHTT+I E LE+QIR EEM AE G+ AH+
Sbjct: 342 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 393
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RP+ ++ + W+ + +W++E T EF D I ++
Sbjct: 394 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 431
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKG+T +D+AY IHTEIG+ AKVNG +V + L N +V
Sbjct: 432 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 491
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VEII S WL++AKT SAR KI +FL+E+ A
Sbjct: 492 VEIIVNKNSPGPSV-----DWLKYAKTHSARAKIRRFLKEKLA 529
>gi|77414296|ref|ZP_00790454.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
gi|77159641|gb|EAO70794.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
Length = 738
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 318/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGXKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEIIT + ++F + W++ KT AR+KI +F + Q ++ + + D+
Sbjct: 446 GDVVEIIT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDY 500
Query: 677 VADSG 681
+ G
Sbjct: 501 FQEQG 505
>gi|450068279|ref|ZP_21847090.1| putative stringent response protein [Streptococcus mutans NLML9]
gi|449207274|gb|EMC07952.1| putative stringent response protein [Streptococcus mutans NLML9]
Length = 740
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEKQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|22538077|ref|NP_688928.1| GTP pyrophosphokinase [Streptococcus agalactiae 2603V/R]
gi|25011966|ref|NP_736361.1| hypothetical protein gbs1928 [Streptococcus agalactiae NEM316]
gi|76788162|ref|YP_330495.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77405021|ref|ZP_00782121.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|77407895|ref|ZP_00784647.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|339300607|ref|ZP_08649750.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|417006340|ref|ZP_11944910.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|421146328|ref|ZP_15606044.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
gi|22534982|gb|AAN00801.1|AE014279_8 GTP pyrophosphokinase family protein [Streptococcus agalactiae
2603V/R]
gi|24413508|emb|CAD47587.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563219|gb|ABA45803.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77173540|gb|EAO76657.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|77176315|gb|EAO79084.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|319745978|gb|EFV98261.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|341576521|gb|EGS26932.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|401686962|gb|EJS82926.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
Length = 738
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 318/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEIIT + ++F + W++ KT AR+KI +F + Q ++ + + D+
Sbjct: 446 GDVVEIIT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDY 500
Query: 677 VADSG 681
+ G
Sbjct: 501 FQEQG 505
>gi|379795989|ref|YP_005325987.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872979|emb|CCE59318.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 736
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 310/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSSDEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + N +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVNEKDQNYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
Length = 746
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 315/565 (55%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD ++I AG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEGVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++GN V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T +++ + W + KT AR+KI ++ R Q + E + + + +
Sbjct: 450 IEIMT------QASAAPSRDWADMVKTSRARNKIRRYFRSQDREESIERGEQMIANMIRE 503
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
E L+ DK EKIL
Sbjct: 504 -------EALAPKDFMDKDHIEKIL 521
>gi|387786972|ref|YP_006252068.1| putative stringent response protein, ppGpp synthetase
[Streptococcus mutans LJ23]
gi|449883389|ref|ZP_21785143.1| putative stringent response protein [Streptococcus mutans SA38]
gi|449903411|ref|ZP_21792089.1| putative stringent response protein [Streptococcus mutans M230]
gi|449914277|ref|ZP_21795517.1| putative stringent response protein [Streptococcus mutans 15JP3]
gi|449936039|ref|ZP_21803764.1| putative stringent response protein [Streptococcus mutans 2ST1]
gi|449946835|ref|ZP_21807078.1| putative stringent response protein [Streptococcus mutans 11SSST2]
gi|449975617|ref|ZP_21815887.1| putative stringent response protein [Streptococcus mutans 11VS1]
gi|449980266|ref|ZP_21817099.1| putative stringent response protein [Streptococcus mutans 5SM3]
gi|449989092|ref|ZP_21820903.1| putative stringent response protein [Streptococcus mutans NVAB]
gi|449994816|ref|ZP_21822743.1| putative stringent response protein [Streptococcus mutans A9]
gi|450002113|ref|ZP_21825898.1| putative stringent response protein [Streptococcus mutans N29]
gi|450051995|ref|ZP_21841111.1| putative stringent response protein [Streptococcus mutans NFSM1]
gi|450062469|ref|ZP_21844354.1| putative stringent response protein [Streptococcus mutans NLML5]
gi|450125108|ref|ZP_21867460.1| putative stringent response protein [Streptococcus mutans U2A]
gi|450155233|ref|ZP_21878154.1| putative stringent response protein [Streptococcus mutans 21]
gi|379133373|dbj|BAL70125.1| putative stringent response protein, ppGpp synthetase
[Streptococcus mutans LJ23]
gi|449158270|gb|EMB61690.1| putative stringent response protein [Streptococcus mutans 15JP3]
gi|449165895|gb|EMB68861.1| putative stringent response protein [Streptococcus mutans 2ST1]
gi|449169385|gb|EMB72162.1| putative stringent response protein [Streptococcus mutans 11SSST2]
gi|449176663|gb|EMB78997.1| putative stringent response protein [Streptococcus mutans 11VS1]
gi|449177181|gb|EMB79494.1| putative stringent response protein [Streptococcus mutans 5SM3]
gi|449182941|gb|EMB84942.1| putative stringent response protein [Streptococcus mutans NVAB]
gi|449183650|gb|EMB85627.1| putative stringent response protein [Streptococcus mutans N29]
gi|449184976|gb|EMB86885.1| putative stringent response protein [Streptococcus mutans A9]
gi|449201351|gb|EMC02351.1| putative stringent response protein [Streptococcus mutans NFSM1]
gi|449205809|gb|EMC06539.1| putative stringent response protein [Streptococcus mutans NLML5]
gi|449232901|gb|EMC31992.1| putative stringent response protein [Streptococcus mutans U2A]
gi|449237340|gb|EMC36197.1| putative stringent response protein [Streptococcus mutans 21]
gi|449249838|gb|EMC47932.1| putative stringent response protein [Streptococcus mutans SA38]
gi|449261105|gb|EMC58591.1| putative stringent response protein [Streptococcus mutans M230]
Length = 740
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
Length = 758
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 315/548 (57%), Gaps = 77/548 (14%)
Query: 126 SPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+P+ L + L T+ S S ++E+V RA +AFEAH QKR+SGEP+IIHP+ VA IL E
Sbjct: 24 APDELRQQLMETMKSLYSDEDIEMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAE 83
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT+V T+E + EFG V ++V+G TK+ +L K K E
Sbjct: 84 LELDRETIIAGLLHDVVEDTDV-TYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIE--- 139
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ M P KQ + ET+ ++AP+A
Sbjct: 140 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIA 196
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN---KILMKKIEDD 361
LG+ +IK EL++LS Y D+YKE E L+ + +K+I D+
Sbjct: 197 HRLGISKIKVELDDLSLRYLK-----------PDVYKELEHSLDSQKVRREAYIKEIVDE 245
Query: 362 --QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
++ +K EI K +SIYK ++ +++++ + +RI +
Sbjct: 246 VSGHIERSGIKAEIDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKV------------ 293
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLE 474
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E
Sbjct: 294 DTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPF--------E 345
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
+QIRT EM IAE GIAAH+ + + +V +N ++SWL
Sbjct: 346 IQIRTFEMHRIAEYGIAAHWKYK----------------EKSSSVGVNKEE--EKLSWLR 387
Query: 535 AIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
I EWQ++ N +EF+ + DL +V+ FTP G++K+L G+T +D+AY IH+
Sbjct: 388 EILEWQQDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKSLANGSTPIDFAYSIHS 444
Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHK 652
+GN MV A+VNG V + L N + VE+IT S+++ + WL K+ A+ K
Sbjct: 445 AVGNTMVGARVNGRQVPFEYHLQNGDRVEVIT-----SQNSKGPSRDWLNIVKSTQAKSK 499
Query: 653 IMKFLREQ 660
I ++ + Q
Sbjct: 500 INQWFKTQ 507
>gi|422845570|ref|ZP_16892280.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684220|gb|EGD26396.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 753
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 206/520 (39%), Positives = 296/520 (56%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+EEFGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEEFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREDYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG ++ + L+ RE E + + EF++ + D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSNNADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHGIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 482
>gi|456370069|gb|EMF48967.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02109]
gi|457094333|gb|EMG24862.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02083]
Length = 739
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 311/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L LV++AL A +AH Q R+SGEP+IIHP++VA IL +L+LD ++A G LHD
Sbjct: 19 YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + T E IE+EFG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M+ ++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N ++ K+ +++ +E E + + I+ K I + + + E+ K
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I++ Q Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GL G S + V +N W+N + E Q+ N +++FVD++ +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSRLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
Length = 736
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/509 (40%), Positives = 302/509 (59%), Gaps = 48/509 (9%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++++V+RA A +AH QKR SGEP+IIHP+ VA IL EL +D +I AGLLHD +EDT
Sbjct: 17 DVDMVKRAYNFAEKAHKEQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ +++ F A + +V+G TK++KLG+++ K + ++ +AD++R+M LAM +++
Sbjct: 77 DC-SYDETVNLFNAEIADLVDGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ + A ETL ++APLA LGM +IK ELE+L F Y
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ +A+ E E +++ L +K+E ++++I K YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYIKDIVSDLEEKLE------AAGIQSDIDGRPKHFYSIY 245
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +R+ L + + CY VLG+VH I+ PIP K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVNSVKDCYGVLGIVHTIYRPIPGRFK 293
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ +
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 343
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G + +G+ + ++ WL + EWQ+E + EF++ DL
Sbjct: 344 -----EGDTAKGEQD--KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL + AT +D+AY IHT+IGNK V AKVNG +V + L E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCRDATPIDFAYRIHTDIGNKCVGAKVNGKIVPLDYSLKTGEIVEILT 453
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKI 653
S +A + WL AK+ ++ KI
Sbjct: 454 -----SPNAKGPNMDWLNIAKSNQSKSKI 477
>gi|400291027|ref|ZP_10793054.1| putative stringent response protein, ppGpp synthetase
[Streptococcus ratti FA-1 = DSM 20564]
gi|399921818|gb|EJN94635.1| putative stringent response protein, ppGpp synthetase
[Streptococcus ratti FA-1 = DSM 20564]
Length = 740
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 313/543 (57%), Gaps = 54/543 (9%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ LV++AL A E H+GQ R+SGEP+IIHP++VA IL +L LD +++ G LH
Sbjct: 18 AYMNEADVALVQKALDYAVECHNGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVIEDTEA-TLDNLENKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ L E +E E ++ KI+ ++ + + +I K
Sbjct: 190 LAFRYLNEVEFYK----ISHLMNEKRREREALVNDIVDKIK--EYTEEQGLHGDIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHAVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V +N L ++W+ + E Q GN +FVD++
Sbjct: 348 GIKGKV-----------------SNQESTLGMNWIKELVELQAASNGNAV--DFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVA 678
VVEIIT + ++F + W+ KT AR+KI +F + Q + D + D+
Sbjct: 449 VVEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLIDYFQ 503
Query: 679 DSG 681
+ G
Sbjct: 504 EHG 506
>gi|332522744|ref|ZP_08398996.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
gi|332314008|gb|EGJ26993.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
Length = 739
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/523 (37%), Positives = 312/523 (59%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ N++ V++AL A AH Q R+SGEP+IIHP++VA IL +L+LD ++A G LH
Sbjct: 18 AYMNKNDVAFVKKALDYATAAHYYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG+ VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDNIEMDFGSDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
L+F Y N ++ K+ + + +E E ++E +KI+ E + D +
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDEIVDKIITYTREQGLYGD-------VYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + +++ + +R +++ Q Y ++G +H +W
Sbjct: 243 KHIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK 346
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
V G V S + V +N W+N + E Q+ N +++FVD++
Sbjct: 347 KGVKGKV--------SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ R++VFTP G ++ LPK + +D+AY IHT++G K A+VNG +V T L
Sbjct: 388 EDIFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGARVNGKMVPLTAKLKTG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 448 DVVEIVT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQ 485
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 315/548 (57%), Gaps = 77/548 (14%)
Query: 126 SPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+P+ L + L T+ S S ++E+V RA +AFEAH QKR+SGEP+IIHP+ VA IL E
Sbjct: 170 APDELRQQLMETMKSLYSDEDIEMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAE 229
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT+V T+E + EFG V ++V+G TK+ +L K K E
Sbjct: 230 LELDRETIIAGLLHDVVEDTDV-TYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIE--- 285
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ M P KQ + ET+ ++AP+A
Sbjct: 286 ---VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIA 342
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN---KILMKKIEDD 361
LG+ +IK EL++LS Y D+YKE E L+ + +K+I D+
Sbjct: 343 HRLGISKIKVELDDLSLRYLK-----------PDVYKELEHSLDSQKVRREAYIKEIVDE 391
Query: 362 --QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLC 419
++ +K EI K +SIYK ++ +++++ + +RI +
Sbjct: 392 VSGHIERSGIKAEIDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKV------------ 439
Query: 420 SPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLE 474
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E
Sbjct: 440 DTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPF--------E 491
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
+QIRT EM IAE GIAAH+ + + +V +N ++SWL
Sbjct: 492 IQIRTFEMHRIAEYGIAAHWKYK----------------EKSSSVGVNKEE--EKLSWLR 533
Query: 535 AIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHT 592
I EWQ++ N +EF+ + DL +V+ FTP G++K+L G+T +D+AY IH+
Sbjct: 534 EILEWQQDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKSLANGSTPIDFAYSIHS 590
Query: 593 EIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHK 652
+GN MV A+VNG V + L N + VE+IT S+++ + WL K+ A+ K
Sbjct: 591 AVGNTMVGARVNGRQVPFEYHLQNGDRVEVIT-----SQNSKGPSRDWLNIVKSTQAKSK 645
Query: 653 IMKFLREQ 660
I ++ + Q
Sbjct: 646 INQWFKTQ 653
>gi|323455208|gb|EGB11077.1| hypothetical protein AURANDRAFT_52662, partial [Aureococcus
anophagefferens]
Length = 467
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/484 (40%), Positives = 277/484 (57%), Gaps = 42/484 (8%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL P+ + VR A+ +AF AH GQKRRSGEPF+ HPVEVA+IL +D +++ +GLLHD
Sbjct: 14 YLRPSGRKAVRYAVEVAFLAHRGQKRRSGEPFVTHPVEVAKILARTHMDRDTVVSGLLHD 73
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT++ TF +E FG VRRIVEGETKVSKL K+ + + +++R MF+A
Sbjct: 74 TVEDTDL-TFGEVEAMFGVDVRRIVEGETKVSKLPKMARDLPAADAEKEQVENMRSMFIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M E+ R+++VKLADRLHNMRTL MPP K++ I+ ETL++FAPLA LGM+Q K+ELE
Sbjct: 133 MAEDWRIVVVKLADRLHNMRTLRFMPPRKRAKISRETLEIFAPLAHRLGMWQYKTELEET 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF + +YA + +A E LEE L + DD + I K
Sbjct: 193 SFEHLFPAEYAALDEAIARKRTTVEAALEECRGKLETMLMDDVMIKGRMRTVSIEGRTKS 252
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS +K + + + I ++ + LR+++K + + +CYHVLG VH WTP+
Sbjct: 253 CYSTWKKMQRQQCGIERIDDLVALRVVLKAERPEAE----ADTSLCYHVLGKVHSTWTPL 308
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
PR +KDYI++PKPNGY+SLHTT++ LEVQIRT++M +AE G AAH++ +
Sbjct: 309 PRTLKDYISSPKPNGYRSLHTTVLV----GSQPLEVQIRTDDMHRVAELGAAAHWAYK-- 362
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ + WL IREW + +S F+ + +
Sbjct: 363 -------------------------DTDASLPWLQIIREWHAQVD---SSSVFMQLVRNE 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN---KMVAAKVNGNLVSPTHVLAN 616
LLG+RVFVF PRG I NL KGAT+ D + +E + A VNG + L N
Sbjct: 395 LLGTRVFVFAPRGRILNLAKGATLADAVAHVVSEESQSDRRGALAYVNGQREDAEYELRN 454
Query: 617 AEVV 620
++V
Sbjct: 455 GDIV 458
>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
Length = 741
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 301/521 (57%), Gaps = 55/521 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++P L V +A A H Q R+SGEP+IIHP++VA IL EL++D E++A+G LH
Sbjct: 18 AYMNPEHLAFVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VED N+ T IEE FG V IV+G TK+SK+ + K+E A++ R+M L
Sbjct: 78 DVVEDKNI-TLGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDE-------LAENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y N + Y ++ + E E ++EA + + K + D + +K EI K
Sbjct: 190 LSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKALAD------LHIKYEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + +E+ + +R+I + CY VLG +H W P
Sbjct: 244 HIYSIYKKMRDKHKQFDELYDLLAIRVI------------TETIKDCYAVLGAIHTKWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT+I + + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKANLYQSIHTTVIGPMGKP---LEVQIRTEEMHHVAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+T + ++ I E Q+E + + +F++++
Sbjct: 348 ----------------EGQTSKVQYDKAGKKLDIFREILELQDE---SSDAADFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ RV+VFTP+G++ LPKG+ +D+ Y+IHTE+ N V AKVNG +V +VL N +
Sbjct: 389 DIFTDRVYVFTPKGDVYELPKGSNPLDFGYLIHTEVANHTVGAKVNGKIVPLNYVLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+VE++T +S SA R W++ T AR+KI ++ ++
Sbjct: 449 IVEMLT----ASGSAPSR--DWIKLVYTSRARNKIKRYFKQ 483
>gi|77411860|ref|ZP_00788193.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
gi|77162081|gb|EAO73059.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
Length = 738
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 318/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEIIT + ++F + W++ KT AR+KI +F + Q ++ + + D+
Sbjct: 446 GDVVEIIT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDY 500
Query: 677 VADSG 681
+ G
Sbjct: 501 FQEQG 505
>gi|333905747|ref|YP_004479618.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
gi|333121012|gb|AEF25946.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
Length = 739
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 311/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L LV++AL A +AH Q R+SGEP+IIHP++VA IL +L+LD ++A G LHD
Sbjct: 19 YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + T E IE+EFG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M+ ++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N ++ K+ +++ +E E + + I+ K I + + + E+ K
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I++ Q Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GL G S + V +N W+N + E Q+ N +++FVD++ +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSRLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|85859448|ref|YP_461650.1| GTP pyrophosphokinase [Syntrophus aciditrophicus SB]
gi|85722539|gb|ABC77482.1| GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Syntrophus aciditrophicus SB]
Length = 723
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/544 (37%), Positives = 315/544 (57%), Gaps = 58/544 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ + L T YL+P E EL+ +A + + H GQ R SGEP++ HP+EVA IL ++ELD
Sbjct: 3 RITDILDKTQEYLTPIEQELIEKAYIFSASVHQGQVRLSGEPYMTHPMEVAGILSDMELD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IA GLLHDTVEDT + T E+IEE FG V +V+G TK+SK+ S ++
Sbjct: 63 AATIATGLLHDTVEDT-LTTLEQIEELFGKDVAFLVDGLTKISKIT-------FSSQEER 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM+ ++R+++V+LADR+HNMRTL P +Q IA ET++++APLA LG
Sbjct: 115 QAENFRKMILAMSADIRILLVRLADRIHNMRTLEFHTPERQKYIAKETMELYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y+++ ELE+++F Y + E YA + RR+A ++ ++ EE I+ K LD
Sbjct: 175 IYRMQVELEDIAFRYLDYESYANLSRRIALKREKRDEYTEEVKSIIQAK------LDEYG 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K + K +SI+K + + + + +EV + RII+ ++ CY
Sbjct: 229 MKGVVEGRAKHFWSIHKKMHEQKINFDEVYDLTAFRIILD----------SDKEKDCYEA 278
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAE 487
L +VH +W P+PR KDYIA PK N Y+SLHTT+I P+ R+EVQIRT EM AE
Sbjct: 279 LSIVHSLWIPVPRRFKDYIAMPKANNYRSLHTTVIGPYGQ----RVEVQIRTREMHEWAE 334
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ R +++ ++ +I L + E Q+E
Sbjct: 335 EGIAAHW-----------------RYKEKRSLPGDDEE---QIRKLRELLEVQQEL---K 371
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
REF+ + L V+VFTP G++++ PKGAT +D+AY IHT++G++ + AKVN ++
Sbjct: 372 NPREFMSNLKLALFPDEVYVFTPGGDVRSFPKGATPIDFAYSIHTDVGHQCIGAKVNRSI 431
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
V + L N ++VEIIT ++ K WL+H T AR KI +++ + + +
Sbjct: 432 VPLKYELKNGDIVEIIT------QAGHHPSKDWLKHTVTSRARSKIKNWVKAEESKKSIS 485
Query: 668 ITAD 671
+ D
Sbjct: 486 LGKD 489
>gi|329116715|ref|ZP_08245432.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
gi|326907120|gb|EGE54034.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
Length = 739
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 311/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L LV++AL A +AH Q R+SGEP+IIHP++VA IL +L+LD ++A G LHD
Sbjct: 19 YMNDKDLALVKKALGYATDAHFYQARKSGEPYIIHPIQVAGILADLQLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + T E IE+EFG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTEI-TLEDIEDEFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M+ ++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N ++ K+ +++ +E E + + I+ K I + + + E+ K
Sbjct: 191 SFRYLNEIEFYKITHLMSEKRREREALV---DNIVEKII---SYTNEQGLYGEVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I++ Q Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCIME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA---Y 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GL G S + V +N W+N + E Q+ N +++FVD++ +
Sbjct: 346 KKGLKGKV-----SQSDQKVGMN---------WINELVELQD--ASNGDAKDFVDSVKEE 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPNGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|444394540|ref|ZP_21192091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
gi|444259782|gb|ELU66091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
Length = 740
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F R + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGRSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|450123076|ref|ZP_21867029.1| putative stringent response protein [Streptococcus mutans ST6]
gi|449227187|gb|EMC26626.1| putative stringent response protein [Streptococcus mutans ST6]
Length = 740
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLYGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|421532508|ref|ZP_15978869.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
gi|403642300|gb|EJZ03157.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
Length = 738
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 318/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITNKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEIIT + ++F + W++ KT AR+KI +F + Q ++ + + D+
Sbjct: 446 GDVVEIIT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDY 500
Query: 677 VADSG 681
+ G
Sbjct: 501 FQEQG 505
>gi|163814889|ref|ZP_02206277.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
gi|158449828|gb|EDP26823.1| RelA/SpoT family protein [Coprococcus eutactus ATCC 27759]
Length = 814
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 309/541 (57%), Gaps = 65/541 (12%)
Query: 127 PERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L+++L I P+ ++ ++ +A +A AH GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 82 PEDLYKELITRILTYHPSADITMIEKAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAEL 141
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD E+I AG+LHD VEDT V+T E I EF V +V+G V+KL +LK + V
Sbjct: 142 ELDKETIVAGILHDVVEDT-VMTSEEIASEFSEEVAFLVDG---VTKLTQLKMTTDKIEV 197
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
Q A++LR+MFL+M +++RVI++KLADRLHN+RTL + P KQ A ET+ ++AP+A
Sbjct: 198 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPEKQIEKARETMDIYAPIAH 254
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFL 364
LG+ +IK EL++LS MY E Y +K ++ +++L E + + + +ED + +
Sbjct: 255 RLGISKIKVELDDLSMMYLMPEVYNDLKAQI-------DEKLTERDAYIKRVVEDVKKHI 307
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
D ++ EI K +SIYK + +++++ I +RI + + +
Sbjct: 308 DNAGLEAEIDGRVKHFFSIYKKMKNQNKTLDQIYDIFAVRIKV------------NTVRD 355
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 356 CYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIRT 407
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +TG V ++SWL I EW
Sbjct: 408 YEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILEW 449
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q + N FV T DL +V+ FTP G++KNLP G+T +D+AY IHT +GNKMV
Sbjct: 450 QRDTDDNKEFMSFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKMV 508
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
A++NG V L N + VEIIT S+++ + WL K+ A+ KI ++ +
Sbjct: 509 GARINGRQVPIDTKLNNGDRVEIIT-----SQNSTGPSRDWLNLVKSTQAKTKINQWFKH 563
Query: 660 Q 660
Q
Sbjct: 564 Q 564
>gi|336437345|ref|ZP_08617051.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336005471|gb|EGN35516.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 767
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 315/543 (58%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE+L++ L + P+ ++ L+ +A A EAH+GQ R+SGEP+IIHP+ V IL +
Sbjct: 30 DPEQLYQALIERVRKYHPSADISLIEKAYKTANEAHNGQVRKSGEPYIIHPLWVGIILAD 89
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT++ T + + EFG V +V+G V+KLG+L +
Sbjct: 90 LEMDKETIVAGMLHDAVEDTDM-TLDDVSREFGEEVALLVDG---VTKLGQLSYSQDKLE 145
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+Q A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 146 IQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMRPEKQKEKAKETMDIYAPIA 202
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK EL++LS Y+ E Y ++ V DL + K E +I+ E +
Sbjct: 203 QRLGISKIKIELDDLSLKYSQPEVYQQL---VHDLNERKTKREEFVQQIVS---EVSTHM 256
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 257 KNAHIQAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ PF E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 356
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + G G A K V +++WL I EW
Sbjct: 357 EEMHKTAEYGIAAHWK---YKEG--GDA--------AKVVQAQEE----KLNWLRQILEW 399
Query: 540 QEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A+ KI +
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSRGPSRDWLNIVKSTQAKSKINSWF 511
Query: 658 REQ 660
+++
Sbjct: 512 KKE 514
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/509 (40%), Positives = 298/509 (58%), Gaps = 48/509 (9%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ +V +A A +AH QKR SGEP+IIHP+ VA IL EL +D +I AGLLHD +EDT
Sbjct: 17 DVNMVEKAYHFAEQAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ +++ + F A + +VEG TK++KLG+++ K + ++ +AD++R+M LAM +++
Sbjct: 77 DC-SYDETVKLFNAEIANLVEGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ + A ETL ++APLA LGM +IK ELE+L F Y
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ +A+ E E +++ K L +K+E + ++I K YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYIKDIVKDLYEKLETS------GIHSDIDGRPKHFYSIY 245
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +R+ L + CY VLG+VH I+ PIP K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVHSVKDCYGVLGIVHTIYRPIPGRFK 293
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ + G
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWK---YKEGDA 347
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G + + K ++ WL + EWQ+E + EF++ DL
Sbjct: 348 GKPEQDKQKDFEK-----------KLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT+IGNK + AKVNG +V + L E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCNNATPIDFAYRIHTDIGNKCIGAKVNGKIVPLDYTLKTGEIVEILT 453
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKI 653
S +A + WL AK+ ++ KI
Sbjct: 454 -----SPNAKGPNMDWLNIAKSNQSKSKI 477
>gi|417922710|ref|ZP_12566197.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
gi|342832237|gb|EGU66537.1| RelA/SpoT family protein [Streptococcus cristatus ATCC 51100]
Length = 739
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A E H GQ R+SGEP+I+HP++VA IL +L+LD S+A G
Sbjct: 16 TKKYLAAEDVAFVQKALIYAMECHSGQTRKSGEPYIVHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKLADRLHNMRTL+H+ P KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDLRVILVKLADRLHNMRTLNHLRPDKQERISQETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE ++ KIE + + +I
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRREREALVEE----VVHKIE--TYAGERNLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ S Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------STHSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +G+ A+ ++W+ + E Q + + ++EFVD++
Sbjct: 346 KKGIKGQV-----DGKES------------AIGMNWIKELMELQNQ---SGDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V L
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLNTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLNLVKTSKARNKIRQFFKNQ 484
>gi|306829044|ref|ZP_07462235.1| GTP diphosphokinase [Streptococcus mitis ATCC 6249]
gi|304428849|gb|EFM31938.1| GTP diphosphokinase [Streptococcus mitis ATCC 6249]
Length = 738
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E+EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I++ Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
16795]
gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
Length = 736
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 203/530 (38%), Positives = 315/530 (59%), Gaps = 56/530 (10%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
+++ I +PN ++ V +A LA AH G R+SGEP+IIHP+ VA IL +LELD E
Sbjct: 7 QEILDKIKKYAPNADVTPVIKAYELAKSAHAGVFRKSGEPYIIHPIAVANILADLELDME 66
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
IAAGLLHD VEDT T+E I+E FG + +V+G V+KLGK+K + + S +A
Sbjct: 67 VIAAGLLHDVVEDTPY-TYEDIKELFGKDIADLVDG---VTKLGKIKYQTKEES----QA 118
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MFLAM +++RVI++KLADRLHNMRTL +MP K A ETL+++ +A +G+
Sbjct: 119 ENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPEEKAKYKAKETLEIYGGIAHRIGIS 178
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+IK ELE+L+ Y + E Y ++ ++ + ++ +++ ++L K ++ + +
Sbjct: 179 KIKWELEDLALKYIDPEGYRELAEKITMKRSQRQEYIDKIVRLLQDKFKE------VDID 232
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
E+ K YSIYK + K + E+ + +RII+ + + CY VLG
Sbjct: 233 CEVSGRPKHFYSIYKKMKKKHKTFEEIYDLTAVRIIV------------NTIKDCYAVLG 280
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+VH +W P+P KDYIA PKPN YQSLHTT+I E +E+QIRT EM IAE GI
Sbjct: 281 MVHTMWIPMPGRFKDYIAMPKPNLYQSLHTTVIGPDGEP---VEIQIRTHEMHEIAENGI 337
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+ + +TG ++A + ++ WL + EW+++
Sbjct: 338 AAHWKYKEGITG------------------SHDAKMEQKLKWLRQMMEWEKDV---QDPH 376
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+D + D+ S+V+VFTPRG++ LP G+T +D+AY +HT +GNK AK+NG +V
Sbjct: 377 EFLDALKDDVFNSQVYVFTPRGDVIELPAGSTPIDFAYRVHTNVGNKCTGAKINGKIVPI 436
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N E+VE+IT S ++ + WL +T +AR++I ++ +++
Sbjct: 437 NYKLQNGEIVEVIT-----SANSPGPSRDWLSIVQTPTARNRIRQWFKKE 481
>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
Length = 750
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 300/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYKFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A K L Q LD + ++ EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTL------KQTLDSLGIEYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYM+H+E+G V A++NG +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W++ KT AR+KI +F + +
Sbjct: 452 VEMLT------QTSARPSRDWVKLVKTSRARNKIKRFFKAE 486
>gi|256828245|ref|YP_003156973.1| (p)ppGpp synthetase I SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
gi|256577421|gb|ACU88557.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
Length = 715
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/526 (38%), Positives = 304/526 (57%), Gaps = 60/526 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ + L +YLSP ++ L+++A + + AH GQ R SGEP++ HP+EV+ IL +L LD
Sbjct: 3 RITDILDQASTYLSPLDVALIQKAYVFSAAAHAGQIRLSGEPYLSHPLEVSNILVDLRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I AGLLHDTVEDT V + +I E FG V IVEG TK+SK+ S +
Sbjct: 63 AATIVAGLLHDTVEDTEV-SIPQIVELFGPEVGAIVEGVTKISKM-------NFESKEQA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM +++RVI+VKLADRLHN+ TL +KQ +IA ETL ++APLA LG
Sbjct: 115 QAENIRKMILAMADDIRVILVKLADRLHNISTLEFQKEYKQRAIAQETLGIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y+IK +LEN Y + YA++ + + + +++ + ++ + +++
Sbjct: 175 LYRIKVQLENYGLRYMKPDVYAQISEGINRYQDQGQAYIDKVSAMIQDVLAENE------ 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ ++ K YSIY +K RG +++++ + R+I+ + + CY
Sbjct: 229 INGRVKGRIKHTYSIYHK-MKQRGLTLDQIFDMIAFRVIV------------NNLRECYT 275
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLGLVH +W P+P KDYI+ PK N YQSLH+T+I E R+E+QIRTEEM +AE
Sbjct: 276 VLGLVHSLWKPVPGKFKDYISMPKANMYQSLHSTVIGPEGE---RIEIQIRTEEMHQLAE 332
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH+S + +G A A R SWL I +WQ +
Sbjct: 333 NGVAAHWS-----------YKEHGS---------KKAQEADRFSWLRQILDWQGDL---K 369
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
SR+F+ T++ DL V+VFTPRG++K LP+G T VD+AY+IHTE+GN AKVNG +
Sbjct: 370 DSRDFMSTLSLDLFQDEVYVFTPRGQVKELPEGGTPVDFAYLIHTEVGNHCAGAKVNGRI 429
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
V L N + VEIIT ++ + WL K+ AR +I
Sbjct: 430 VPLNTPLKNGDTVEIIT------DASRNPSRDWLHFVKSGKARSRI 469
>gi|322388258|ref|ZP_08061862.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|419844284|ref|ZP_14367580.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|321140930|gb|EFX36431.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
gi|385701999|gb|EIG39153.1| GTP diphosphokinase [Streptococcus infantis ATCC 700779]
Length = 738
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ + +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G+ G +N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
Length = 740
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 308/540 (57%), Gaps = 54/540 (10%)
Query: 122 FKEDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVAR 180
K D+ + +D+ T+ +P +L+ +A LA+EAH QKR SGE +I HP+ VA
Sbjct: 1 MKTDNMDITIDDIINTVKSYNPQANFDLITKAYNLAYEAHADQKRISGEMYITHPLHVAM 60
Query: 181 ILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKN 240
IL +L +D +IAA LLHD VEDT + T E+++E FG V +++G TK+SK+ K K K
Sbjct: 61 ILTDLHIDEVTIAAALLHDVVEDT-IYTIEQMKELFGEEVAMLIDGVTKLSKM-KYKSK- 117
Query: 241 ENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVF 300
+D + + R+MFLAM +++RVI++KLADRLHNMRTL +M KQ IA ETL+V+
Sbjct: 118 -----EDQQLETYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREEKQKRIAKETLEVY 172
Query: 301 APLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 360
APLA LG+ IK ELE+L Y E Y + +V +E + + +A + KI+
Sbjct: 173 APLANRLGISNIKWELEDLCLRYLEPETYYDLVDKVNQKREERQGFINDA----VAKIQ- 227
Query: 361 DQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCS 420
Q D + +K EI+ K YSIY+ + KS I+++ + +R++++ P
Sbjct: 228 -QEFDKIHLKGEIKGRAKHFYSIYRKMKKSNKDISDIFDLLAVRVLVQTIPD-------- 278
Query: 421 PQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTE 480
CY VLG++H +W P+P KDYIA PK NGYQSLHTT+I ++ LE+QIRT
Sbjct: 279 ----CYTVLGIIHAMWKPLPGRFKDYIAVPKTNGYQSLHTTVIT---DNGLPLEIQIRTF 331
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
M I+E GIAAH+ + +G N+ ++SWL + Q
Sbjct: 332 AMHAISEYGIAAHWKYKEAGNKSIGA----------------NSEYDKKLSWLRQMITLQ 375
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
+EF RE+ + + D+ VFV+TPRG++ NLPKG+ +D+AY IHT+IGN V
Sbjct: 376 DEFSD---PREYFEALKIDIFSDEVFVYTPRGDVINLPKGSNPIDFAYHIHTDIGNHCVG 432
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
AKVNG +V + L N ++V +IT + S WL + R KI ++ ++Q
Sbjct: 433 AKVNGKIVPLEYTLQNGDIVSVITNKQNNGPSP-----DWLNIVASSQTRTKIRQWFKKQ 487
>gi|313123577|ref|YP_004033836.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280140|gb|ADQ60859.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 753
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 297/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E+Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEEYYKIVSMMDAKRSEREDYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG ++ + L+ RE E + + EF++ + D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSNNADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHGIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 482
>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
Length = 715
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 308/522 (59%), Gaps = 57/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+LV +A A +AH+GQ R SGEPF+ HP+ VA IL +LELD SI A ++H
Sbjct: 12 SYMDEPDLDLVIKAYNYAKKAHEGQYRVSGEPFVDHPLGVAMILADLELDIISIVASMMH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E I +EFG V IVEG TK++++ + K K +D +A+ LR+MF+
Sbjct: 72 DVVEDTEI-TSEDIRKEFGDEVAHIVEGVTKLTRM-QFKTK------EDQQAESLRKMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV+++KLADRLHNMRTL+++ K+ + ETL+++APLA LGM ++K ELE+
Sbjct: 124 AMAEDIRVVLIKLADRLHNMRTLNYLKKEKRKEKSRETLEIYAPLAHRLGMSKLKWELED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L F Y + Y +V +V ++ EK ++EA + L + +E +++EI K
Sbjct: 184 LCFRYLKPDMYYEVSHKVQTNREQREKSIQEAIEKLKETLEKHD------IESEIYGRPK 237
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+SIY + + +E+ + +R+ L + CY VLG++H IW P
Sbjct: 238 HLFSIYNKMKRKEVEFDEIYDLTAVRV------------LVENVKECYEVLGIIHEIWKP 285
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I S LEVQIRT +M AE GIAAH+
Sbjct: 286 MPGRFKDYIAMPKSNMYQSLHTTVIA---PSGDPLEVQIRTYDMHKTAEYGIAAHW---- 338
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
R GK + + ++SWL + EWQ++ +EF++T+
Sbjct: 339 -------------RYKEGK---VGDEKFEEKLSWLRRLLEWQKDL---QEPQEFMETLKI 379
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ +LPKG T VD+AY IHTE+G++ V AKVNG +V + L N++
Sbjct: 380 DLFEDEVFVFTPQGDVVSLPKGGTPVDFAYYIHTEVGHRCVGAKVNGKIVPLEYKLENSD 439
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK + + WL KT AR KI + ++Q
Sbjct: 440 IVEILT-----SKKSSGPTRDWLNFVKTSRARSKIKHWFKKQ 476
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 301/515 (58%), Gaps = 53/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E++++A A +AH QKR SGEP+IIHP++VA IL EL +D +IAAGLLHD +EDT
Sbjct: 17 DVEMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++E ++ F + +V G V+KLGK++ K + ++ +AD++R+M LAM +++
Sbjct: 77 -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ A ETL ++APLA LGM +IK ELE+LSF Y
Sbjct: 129 RVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ ++A+ E E + E L +K LD + ++I K YSIY
Sbjct: 189 HEDEYYQLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +RI L + + CY VLG+VH I+ PIP K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ ++ K + ++ WL + EWQ+E + EF++ DL
Sbjct: 339 --YKEGDKNEEDKA-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT+IGNK V AKVNG +V + L E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
S ++ + WL AK+ ++ KI ++ ++
Sbjct: 449 -----SSNSKGPNMDWLNIAKSNQSKSKIKQWFKK 478
>gi|450006240|ref|ZP_21827118.1| putative stringent response protein [Streptococcus mutans NMT4863]
gi|449187803|gb|EMB89559.1| putative stringent response protein [Streptococcus mutans NMT4863]
Length = 740
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 312/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + ++ +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLDAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ + Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------NTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|421276618|ref|ZP_15727439.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
gi|395876824|gb|EJG87896.1| GTP diphosphokinase [Streptococcus mitis SPAR10]
Length = 738
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ + +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G+ G +N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|450159620|ref|ZP_21879551.1| putative stringent response protein [Streptococcus mutans 66-2A]
gi|449241028|gb|EMC39675.1| putative stringent response protein [Streptococcus mutans 66-2A]
Length = 740
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+I+HP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIVHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|406577350|ref|ZP_11052962.1| GTP pyrophosphokinase [Streptococcus sp. GMD6S]
gi|404460045|gb|EKA06336.1| GTP pyrophosphokinase [Streptococcus sp. GMD6S]
Length = 738
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E+EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I++ Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|429735228|ref|ZP_19269197.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429159340|gb|EKY01855.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 743
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 314/544 (57%), Gaps = 58/544 (10%)
Query: 117 VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
+S DA + + + + + +R SY + +L+ +R+A A +AH GQ R SG+ +IIHP+
Sbjct: 1 MSDDAQRAVTLDMILDKVR---SYQADADLDKIRKAYAYAEQAHSGQVRISGDAYIIHPL 57
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL L LD E+I A LLHD VEDT T E +E EFG + +++G V+KLG++
Sbjct: 58 NVAYILTGLHLDDETICAALLHDVVEDT-CATLEEMEAEFGKNIMALIDG---VTKLGRI 113
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
E S +DV+ ++ R+MFLAM +++RVI++KLADRLHNMRTL +M K+ IA ET
Sbjct: 114 ----EYMSKEDVQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAKET 169
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
L+V+APLA LG+ IK ELE+L Y E Y + V KE ++ + E+ + + +
Sbjct: 170 LEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQEFIRESIEQIRE 229
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
K+E +K EI+ K YSIY+ + + S+NE+ ++ +R+++
Sbjct: 230 KLE------AAGIKAEIKGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLV--------- 274
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
S + CY VLG++H +W PIP KDYIA PK NGYQSLHTT++ Y LE+Q
Sbjct: 275 ---SSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGYP----LEIQ 327
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT+ M ++E G+AAH+ + G+++ + N ++SWL +
Sbjct: 328 IRTKAMHQVSEFGVAAHWKYK----------------EAGRSIGATDEN-DQKMSWLRQM 370
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
Q+E+ +EF + + D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+
Sbjct: 371 VSLQKEY---DDPKEFFEALKLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGH 427
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
V AKVNG +V + L N ++V I+T A + S WL + + R KI +
Sbjct: 428 HCVGAKVNGKIVPLEYKLKNGDIVSIVTNKASNGPSP-----DWLNTVASSATRSKIRAW 482
Query: 657 LREQ 660
+++
Sbjct: 483 FKKE 486
>gi|238852662|ref|ZP_04643072.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
gi|238834808|gb|EEQ27035.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
Length = 750
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 300/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A K L Q LD + ++ EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTL------KQTLDSLGIEYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYM+H+E+G V A++NG +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W++ KT AR+KI +F + +
Sbjct: 452 VEMLT------QTSARPSRDWVKLVKTSRARNKIKRFFKAE 486
>gi|116629512|ref|YP_814684.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282852110|ref|ZP_06261468.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311110845|ref|ZP_07712242.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|420147336|ref|ZP_14654612.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
gi|116095094|gb|ABJ60246.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282556870|gb|EFB62474.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311065999|gb|EFQ46339.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|398401337|gb|EJN54839.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
Length = 750
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 300/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A K L Q LD + ++ EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAIKTLK------QTLDSLGIEYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVRDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYM+H+E+G V A++NG +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMVHSEVGAHSVGARINGKIVPLDYKLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W++ KT AR+KI +F + +
Sbjct: 452 VEMLT------QTSARPSRDWVKLVKTSRARNKIKRFFKAE 486
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 323/532 (60%), Gaps = 56/532 (10%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ E+L I +P+ +L++V +A A+ AH+GQ R+SGE +IIHP+EVA+IL ELELD
Sbjct: 1 MLENLLLMIEQYNPDADLDIVIKAYNYAYNAHEGQYRKSGEKYIIHPLEVAKILAELELD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAAGL+HD VEDT V +F IE FG V +V+G V+KLGK++ K S ++
Sbjct: 61 VFTIAAGLMHDVVEDTEV-SFSDIERLFGTEVAELVDG---VTKLGKIEYK----SKEET 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++LR+MF+AM +++RVI++KLADRLHNMRTL +M K ATET++++AP+A LG
Sbjct: 113 QAENLRKMFMAMGKDIRVILIKLADRLHNMRTLKYMSEEKAKEKATETIEIYAPIAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ ++K E+E+++ Y + E Y + +V+ +E E ++ +L K+E+
Sbjct: 173 ISRVKWEMEDIALRYLDPEGYYDLIEKVSKKRREREAYIQGVIDLLKNKLEE------AN 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ +I+ K YSIY+ + S E+ + +RI L + CY V
Sbjct: 227 IEGDIKGRAKHFYSIYRKMKYQSKSFEEIYDLMAVRI------------LVDSLKDCYGV 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
+G+VH IW P+P KDYIA PKPN YQSLHTT++ E LE+QIRT+EM AE
Sbjct: 275 VGIVHTIWKPMPGRFKDYIAMPKPNMYQSLHTTVLGPDGEP---LEIQIRTKEMHRTAEF 331
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + GK + N +++ ++SWL + EWQ++ V + T
Sbjct: 332 GIAAHW-----------------KYKEGK-IDPNESDMDKKLSWLRQMMEWQKD-VSDPT 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
EF++++ DL ++VFVFTP+G++ LP +T +D+AY +H+ +GN+ + AKV+G +V
Sbjct: 373 --EFMESLKIDLFVNQVFVFTPKGDVIELPAESTPLDFAYKVHSGVGNRCIGAKVDGRIV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N +VE++T + + S + WL K+ A++KI ++ +++
Sbjct: 431 PLDYKLKNGNIVEVMTSSNSNGPS-----RDWLNIVKSSHAKNKIRQWFKKE 477
>gi|260101667|ref|ZP_05751904.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
gi|260084527|gb|EEW68647.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
Length = 746
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 315/565 (55%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD ++I AG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVTFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ I++ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++GN V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T +++ + W + KT AR+KI ++ R Q + E + + + +
Sbjct: 450 IEIMT------QASAAPSRDWADMVKTSRARNKIRRYFRSQDREESIERGEQMIANMIRE 503
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
E L+ DK EKIL
Sbjct: 504 -------EALAPKDFMDKDHIEKIL 521
>gi|449894471|ref|ZP_21789272.1| putative stringent response protein [Streptococcus mutans SF12]
gi|449255314|gb|EMC53172.1| putative stringent response protein [Streptococcus mutans SF12]
Length = 740
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 310/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQGRISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
Length = 765
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 209/545 (38%), Positives = 317/545 (58%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL TI P +++ ++ +A +A EAH QKR+SGEP+IIHP+ VA +L +
Sbjct: 26 SPEELYQDLINTIRKYHPSDDITMIEKAYRIANEAHKEQKRKSGEPYIIHPLCVAIVLAD 85
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT ++T +++ +EFG+ V +V+G TK+++L K K E
Sbjct: 86 LEMDKETIAAGLLHDVVEDT-IMTLDQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 141
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++AD+LR+MFLAM +++RVII+KLADRLHNMRT + P KQ A ET++++AP+A
Sbjct: 142 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 198
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK EL++LS + + Y + +V DL K +A + +++I D+
Sbjct: 199 DRLGISKIKIELDDLSLKFLKPDVYYDLVEKV-DLRK-------DAREAFVQEIVDEVKN 250
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ V + K +SIYK ++ +++++ + +RI++
Sbjct: 251 HMKEAGVDATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMV------------DNV 298
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QI
Sbjct: 299 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQI 350
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM AE GIAAH+ + +G V ++SWL I
Sbjct: 351 RTYEMHRTAEYGIAAHWKYKESGSGQVAAGSEEA-----------------KLSWLRQIL 393
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ + S+EF+ + DL V+ FTP G++K LP G+T +D+AY IH+ +G
Sbjct: 394 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVG 450
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG LV +V+ N + +EIIT S+++ + WL K+ A++KI +
Sbjct: 451 NKMVGARVNGKLVPIEYVIQNGDQLEIIT-----SQNSKGPSRDWLNIVKSTQAKNKINQ 505
Query: 656 FLREQ 660
+ + Q
Sbjct: 506 WFKNQ 510
>gi|347532608|ref|YP_004839371.1| (p)ppGpp synthetase I SpoT/RelA [Roseburia hominis A2-183]
gi|345502756|gb|AEN97439.1| (p)ppGpp synthetase I, SpoT/RelA [Roseburia hominis A2-183]
Length = 788
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 315/561 (56%), Gaps = 84/561 (14%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SPE L+ +L ++ P+ ++ L+ +A +A +AH+GQ R+SGEP+I+HP+ VA IL
Sbjct: 34 ESPEDLYHELIASVRKYHPSADISLIEKAYHVARDAHEGQTRKSGEPYIVHPLCVAIILA 93
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD E+IAAGLLHD +EDT V+T + I+EEF V +V+G TK+ L L + NH
Sbjct: 94 ELELDKETIAAGLLHDVLEDT-VMTADEIKEEFSEEVLLLVDGVTKLRHL-HLTDNSHNH 151
Query: 244 SVQD-------VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
+D ++A++LR+MFLAM +++RVI++KLADRLHNMRTL + Q IA ET
Sbjct: 152 DQKDRSAERLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQIRIARET 211
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
+++ P+A+ LG+ +IK EL++LS Y E Y + R++ K
Sbjct: 212 QEIYCPIAQRLGISKIKIELDDLSLKYLEPEAYYDLVRQIDQ----------------RK 255
Query: 357 KIEDDQFLDLMT----------VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
+ DD L+ + EI K +SIYK ++ +++++ + +RII
Sbjct: 256 SVRDDYVQSLVEEVRAHIKAAGIVAEIEGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRII 315
Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI--- 463
+ + CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI
Sbjct: 316 V------------DSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPT 363
Query: 464 --PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCL 521
PF E+QIRT EM AE GIAAH+ + A NG + TV
Sbjct: 364 GQPF--------EIQIRTYEMHRTAEYGIAAHWKYK--------EASNNGGAAVPMTVTE 407
Query: 522 NNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPK 579
++SWL I EWQ + N +EF+ + DL VF FTP G++KNLP
Sbjct: 408 EE-----KLSWLRQILEWQRDMSDN---KEFMSLLKSDLDLFSDTVFCFTPTGDVKNLPN 459
Query: 580 GATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQ 639
G+T +D+AY IH+ +GNKM+ AK NG LV +V+ N + +EIIT S+++ +
Sbjct: 460 GSTPIDFAYSIHSAVGNKMIGAKANGKLVPIDYVIQNGDRIEIIT-----SQNSKGPSRD 514
Query: 640 WLEHAKTRSARHKIMKFLREQ 660
WL K+ A++KI ++ R +
Sbjct: 515 WLNIVKSTQAKNKINQWFRSE 535
>gi|429762033|ref|ZP_19294440.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
gi|429182579|gb|EKY23677.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
Length = 765
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 314/551 (56%), Gaps = 69/551 (12%)
Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
S D+F PE L L T+ S ++E V RA +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18 SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL ELELD E+I AGLLHD VEDT T E I +FG V ++V+G TK+ +L
Sbjct: 76 CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
K K E V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ M P KQ + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
+ ++AP+A LG+ +IK EL++L+ Y + Y ++R + +E E ++E ++
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAFIQE----IVD 244
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
+++ +D +K EI K +SIYK ++ +I+++ + +RI +
Sbjct: 245 EVKG--HIDRAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344
Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
E+QIRT EM +AE GIAAH+ + T LN ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
WL + EWQ + N +EF+ + DL +V+ FTP G++KNL G+T +D+AY
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441
Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSA 649
IH+ +GNKMV A+VNG V + L N + VEIIT S+++ + WL K+ A
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT-----SQNSKGPSRDWLGIVKSAQA 496
Query: 650 RHKIMKFLREQ 660
R KI ++ + Q
Sbjct: 497 RSKINQWFKRQ 507
>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 723
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/531 (38%), Positives = 309/531 (58%), Gaps = 57/531 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L+E + + Y ++ +R+A A AH GQKR SGE +I+HP+ ++ IL EL+LD
Sbjct: 4 LFELEQKVLLYNPAADIAFLRKAYNFAEHAHRGQKRISGEDYIVHPLAISIILAELQLDV 63
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHD VEDT + T IE FGA V +V+G V+KLGKL+ + + ++ +
Sbjct: 64 QTVAAGLLHDVVEDTGI-TLADIENNFGAEVANMVDG---VTKLGKLQYQTK----EERQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFLAM +++RVI++KLADRLHN+RTL KQ +A ETL FAP+A LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLHFFAPMAHRLGI 175
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y+IK ELE+LSF Y E Y ++K ++A + E+ ++ K L +K L + +
Sbjct: 176 YKIKWELEDLSFRYLEPEQYQRMKAQIAKSRAKREEYIQGVIKELAEK------LAAVNI 229
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
K EI+ K YSIY+ +++ + + ++ + +R+ L + + CY L
Sbjct: 230 KAEIQGRPKNLYSIYQKMIEQQKELKDIFDVQAVRV------------LVNSVKDCYGAL 277
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+ H +W PIP KDYIA PK N YQSLHTT+I E +E+QIRT EM +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEP---VEIQIRTWEMHRVAEYG 334
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ R K + +++W+ + + Q E +
Sbjct: 335 IAAHW--------------------RYKEGAQGEKDFDKKLAWIRQMLDAQHE---ARDA 371
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
REF++ + DL VFVFTP+G++ LP GA +D+AY IHT++G++ V AKVNG +V
Sbjct: 372 REFMENLKIDLFSQSVFVFTPKGDVMELPAGAVPLDFAYRIHTDVGHRTVGAKVNGRIVP 431
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VEIIT A + S + WL KT A+++I ++ +++
Sbjct: 432 LDYKLKNGDIVEIITSKASNGPS-----RDWLNIVKTSQAKNRIRQWFKKE 477
>gi|306825730|ref|ZP_07459069.1| GTP diphosphokinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432091|gb|EFM35068.1| GTP diphosphokinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 738
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|417007457|ref|ZP_11945369.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
gi|328467645|gb|EGF38700.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
Length = 746
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 315/565 (55%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +++ V +A A +AH GQKR SG+P+IIHP +VA L L LD ++I AG LHD
Sbjct: 19 YMNDDQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ I++ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFTGVQESSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++GN V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGNHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T +++ + W + KT AR+KI ++ R Q + E + + + +
Sbjct: 450 IEIMT------QASAAPSRDWADMVKTSRARNKIRRYFRSQDREESIERGEQMIANMIRE 503
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
E L+ DK EKIL
Sbjct: 504 -------EALAPKDFMDKDHIEKIL 521
>gi|406710270|ref|YP_006764996.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
gi|424048660|ref|ZP_17786211.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
gi|389649915|gb|EIM71389.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
gi|406651155|gb|AFS46556.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
Length = 738
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 318/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VK+ADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKIADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEIIT + ++F + W++ KT AR+KI +F + Q ++ + + D+
Sbjct: 446 GDVVEIIT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDY 500
Query: 677 VADSG 681
+ G
Sbjct: 501 FQEQG 505
>gi|395242383|ref|ZP_10419380.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480115|emb|CCI85620.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 743
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 317/565 (56%), Gaps = 62/565 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V++A A +AH+GQ R SG+P+IIHP +VA L L LD ++IAAG LHD
Sbjct: 19 YMTDEQLAFVKKAYNYANKAHEGQTRASGQPYIIHPTQVAGTLANLGLDQDTIAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I++EFG V IV+G V+KL K + K S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKKEFGEDVAFIVDG---VTKLNKYQYK----SHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL+H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLNHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N + Y ++ + E E + E +L K LD + +K E+ K
Sbjct: 191 SFHYLNPDAYYRIVSLMDLKRSERESYIAETISVLKKT------LDSLGIKYEVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+++K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVDKHKDFNEIYDLLAVRVLVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEQMHQVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + ++ ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFSGVQASSSGEKLDMVREILELKDE---TKDADEFMRSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+A+ IHT++G+ V AK+N LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAFEIHTQVGSHAVGAKINNKLVPLDYKLKNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+EI+T + S + W++ KT AR+KI ++ + + E V + + +
Sbjct: 450 IEIMTQSNASPS------RDWVDIVKTSRARNKIKRYFKALDREDSIEKGQQEVANLLRE 503
Query: 680 SGEESEVEDLSDGSKQDKPLWEKIL 704
+ DLS DK EKIL
Sbjct: 504 N-------DLSVKEYMDKDHMEKIL 521
>gi|295428209|ref|ZP_06820841.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295128567|gb|EFG58201.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
Length = 736
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 310/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT+ TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTSY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|449924993|ref|ZP_21799979.1| putative stringent response protein [Streptococcus mutans 4SM1]
gi|450072770|ref|ZP_21848773.1| putative stringent response protein [Streptococcus mutans M2A]
gi|449162069|gb|EMB65228.1| putative stringent response protein [Streptococcus mutans 4SM1]
gi|449210842|gb|EMC11273.1| putative stringent response protein [Streptococcus mutans M2A]
Length = 740
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + ++ +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLDAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|449920505|ref|ZP_21798522.1| putative stringent response protein [Streptococcus mutans 1SM1]
gi|450105609|ref|ZP_21859976.1| putative stringent response protein [Streptococcus mutans SF14]
gi|450116699|ref|ZP_21864639.1| putative stringent response protein [Streptococcus mutans ST1]
gi|450132194|ref|ZP_21869901.1| putative stringent response protein [Streptococcus mutans NLML8]
gi|449153346|gb|EMB57028.1| putative stringent response protein [Streptococcus mutans NLML8]
gi|449158789|gb|EMB62197.1| putative stringent response protein [Streptococcus mutans 1SM1]
gi|449224241|gb|EMC23887.1| putative stringent response protein [Streptococcus mutans SF14]
gi|449226803|gb|EMC26294.1| putative stringent response protein [Streptococcus mutans ST1]
Length = 740
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 311/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + + +I K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTEEQGLHGDIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|418963994|ref|ZP_13515820.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383342165|gb|EID20399.1| RelA/SpoT family protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 738
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAISVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDTNA-TLDDLEREFGHDVRMIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE ++ KIE + + EI
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----STNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|322386285|ref|ZP_08059916.1| GTP diphosphokinase [Streptococcus cristatus ATCC 51100]
gi|321269652|gb|EFX52581.1| GTP diphosphokinase [Streptococcus cristatus ATCC 51100]
Length = 739
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A E H GQ R+SGEP+I+HP++VA IL +L+LD S+A G
Sbjct: 16 TKKYLAAEDVAFVQKALIYAMECHSGQTRKSGEPYIVHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKLADRLHNMRTL+H+ P KQ I ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDLRVILVKLADRLHNMRTLNHLRPDKQERILQETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE ++ KIE + + +I
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRREREALVEE----VVHKIE--TYAGERNLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ S Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------STHSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V +G+ A+ ++W+ + E Q + + ++EFVD++
Sbjct: 346 KKGIKGQV-----DGKES------------AIGMNWIKELMELQNQ---SGDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V L
Sbjct: 386 KESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLNTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLNLVKTSKARNKIRQFFKNQ 484
>gi|417937865|ref|ZP_12581165.1| RelA/SpoT family protein [Streptococcus infantis SK970]
gi|343392129|gb|EGV04702.1| RelA/SpoT family protein [Streptococcus infantis SK970]
Length = 738
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E+ +T K I
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|414158038|ref|ZP_11414332.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
F0441]
gi|410870583|gb|EKS18540.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
F0441]
Length = 738
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|449886441|ref|ZP_21786190.1| putative stringent response protein [Streptococcus mutans SA41]
gi|449254205|gb|EMC52125.1| putative stringent response protein [Streptococcus mutans SA41]
Length = 740
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 310/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADITFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTTKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|335428878|ref|ZP_08555788.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|335429314|ref|ZP_08556213.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334890012|gb|EGM28294.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334891819|gb|EGM30065.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
Length = 727
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 303/522 (58%), Gaps = 54/522 (10%)
Query: 140 YLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ E + +++RA A E H Q R+SGEP+IIHP+EV+ IL ++IAAGL+H
Sbjct: 18 YIKKEENINIIKRAYQYAKEKHAKQIRKSGEPYIIHPIEVSLILTSFHAGPKTIAAGLMH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT V T E + + FG + +V+G V+KLG++K S + +A + ++MFL
Sbjct: 78 DVLEDTEV-TEEEMADLFGNEITTLVDG---VTKLGQIKYV----SKEQAQAKNHQKMFL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVII+KLADRLHNMRTL HMP HKQ I+ ETL +FAP+A LGMY++KSELE+
Sbjct: 130 AMAKDIRVIIIKLADRLHNMRTLKHMPRHKQVRISKETLGIFAPIAHRLGMYRLKSELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ + E+Y +A L ++E E+ ++ +I+ L +K I+ K
Sbjct: 190 RCLRFIDPEEYY----YIASLINTKQREREDDIDSIINEIKG--CLKEQDIKFAIKGRIK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+S++K + + +E+ + LRII+ + CY VLGL+H W P
Sbjct: 244 NIFSVHKKMREKNKEFSEIFDLLALRIIVDDEAS------------CYQVLGLIHSNWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP+ KDYIA PKPN YQSLHTT+I L +F EVQIRT EMDL+AE G+AAH++
Sbjct: 292 IPKRFKDYIAMPKPNMYQSLHTTIIA-LNGKIF--EVQIRTNEMDLVAEYGVAAHWA--- 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ T I ++ W + E+ E N + +F++ I
Sbjct: 346 ------------YKESEAHTAEQEQVEIQKKLKWYREMVEYSE----NSDAEDFMELIKD 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D++ + V+VFTP G++ + P GAT +D+AY IH+E+GNK V A VNG +V T+ + +
Sbjct: 390 DIISANVYVFTPEGDVLDFPNGATPIDFAYRIHSEVGNKTVGAIVNGKIVPLTYQMKTGD 449
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V+EI T SK +F + W++ KT AR+KI ++ +Q
Sbjct: 450 VIEIKT-----SKQSFGPSEDWMKIVKTAHARNKIKQYYNKQ 486
>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
2228]
Length = 715
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 307/521 (58%), Gaps = 57/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+ L+LV++A A +AH Q R SGEPF+ HP+ V+ IL ELELD SI + LLHD
Sbjct: 13 YMDEPNLDLVKKAYSYAEKAHKEQYRVSGEPFVEHPLGVSIILAELELDIVSIVSSLLHD 72
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V + E IE+EFGA V IV+G TK++++ + K K D +A+ LR+MF+A
Sbjct: 73 VVEDTSVSSQE-IEKEFGAEVAHIVDGVTKLTRM-QFKTK------ADQQAESLRKMFVA 124
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M E++RV+++KLADRLHNMRTL+++ K+ + ET++++APLA LGM +IK ELE+L
Sbjct: 125 MAEDIRVVLIKLADRLHNMRTLNYLKKAKRKEKSRETIEIYAPLAHRLGMSKIKWELEDL 184
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y + Y ++ +V K+ EK+++EA + L + L+ +++ +I K
Sbjct: 185 SFRYLKPDMYYEISHKVQANRKQREKDIKEAIEKL------NLTLESHSIEADIYGRPKH 238
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY + + +E+ + +R+ L + CY VLG++H IW P+
Sbjct: 239 LYSIYNKMKRKEVEFDEIYDLTAVRV------------LVENVKECYEVLGVLHEIWKPM 286
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRT EM AE GIAAH+ +
Sbjct: 287 PGRFKDYIAMPKSNMYQSLHTTVIA---PNGDPLEVQIRTYEMHKTAEYGIAAHWR---Y 340
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G VG + ++SWL + EWQ++ +EF++T+ D
Sbjct: 341 KEGKVG-----------------DEKFEEKLSWLRRLLEWQKDL---QEPQEFMETLKID 380
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP G++ +LPK AT VD+AY IHTE+G+K V AKVN +V + L N+++
Sbjct: 381 LFEDEVFVFTPAGDVVSLPKEATPVDFAYYIHTEVGHKCVGAKVNSKIVPLEYKLENSDI 440
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK + + WL KT AR K+ + ++Q
Sbjct: 441 VEILT-----SKKSNGPSRDWLNFVKTSKARSKVKHWFKKQ 476
>gi|170288003|ref|YP_001738241.1| (p)ppGpp synthetase I SpoT/RelA [Thermotoga sp. RQ2]
gi|170175506|gb|ACB08558.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga sp. RQ2]
Length = 714
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 300/523 (57%), Gaps = 57/523 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
+ E +L+ +A A H+GQKR SGEPFI HPVEV +IL L +D ++ A LLHD
Sbjct: 26 FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 85
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VED V+ ++I++EFG V RIV+G TKVS + ++++ K + +++MF AM
Sbjct: 86 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSSINAPIGRDQDSR---KKIETIQKMFFAM 142
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ K+ A ETL+++APLA LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 202
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y K+K+ VA+ KE EK E +L +E+ + +K + K
Sbjct: 203 AFKVLYPEEYYKIKKLVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 256
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + E+ + LR+I+K CY VLG+VH IW P+
Sbjct: 257 YYSIWRKMREKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 304
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHTT+I E LE+QIR EEM AE G+ AH+
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RP+ ++ + W+ + +W++E T EF D I ++
Sbjct: 357 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKG+T +D+AY IHTEIG+ AKVNG +V + L N +V
Sbjct: 395 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VEII S WL++AKT SAR KI +FL+E+ A
Sbjct: 455 VEIIVNKNSPGPSV-----DWLKYAKTHSARAKIRRFLKEKLA 492
>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
Length = 793
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 321/541 (59%), Gaps = 59/541 (10%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+ P++L++ L I P+ ++ ++ +A A +AH Q R+SGEP+I+HP+ VA IL
Sbjct: 54 EDPDQLYDMLIARIRKYHPSTDVSMIEKAYETARKAHGDQCRKSGEPYIVHPLWVAIILA 113
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
LE+D E+IAAG+LHD VEDT+V + E I++ FG V +V+G V+KLG+L ++
Sbjct: 114 NLEMDKETIAAGMLHDVVEDTSV-SEEEIKKNFGEEVALLVDG---VTKLGRLSYSSDKL 169
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+
Sbjct: 170 EVQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQKEKAKETMDIYAPI 226
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD-- 361
A+ LG+ +IK+EL++L+ Y+ E + + ++ E E+ +++I D+
Sbjct: 227 AQRLGISKIKTELDDLALKYSQPEVFFDLVNQINSRKTEREE--------FVQQIVDEVS 278
Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
+ +K ++ K +SIYK ++ +++++ + +RII+
Sbjct: 279 THMKNANIKADVNGRVKHFFSIYKKMVNQEKTVDQIYDLFAVRIIV------------DS 326
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
+ CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ + + E+QIRTEE
Sbjct: 327 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP---FEIQIRTEE 383
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M AE GIAAH+ + S GK A ++SWL I EWQ
Sbjct: 384 MHKTAEYGIAAHWKYK--------------ESNDGKKSV--QAQEEEKLSWLRQILEWQR 427
Query: 542 EFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
+ N REF++ + DL V+ FTP+G++KNLP G+T +D+AY IH+ +GNKMV
Sbjct: 428 DMSDN---REFLNLLKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMV 484
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++ ++
Sbjct: 485 GARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLGIVKSTQAKNKINQWFKK 539
Query: 660 Q 660
+
Sbjct: 540 E 540
>gi|379021418|ref|YP_005298080.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
subsp. aureus M013]
gi|418562634|ref|ZP_13127091.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
gi|418950240|ref|ZP_13502432.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
gi|359830727|gb|AEV78705.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
subsp. aureus M013]
gi|371973738|gb|EHO91086.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
gi|375377478|gb|EHS80945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
Length = 729
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VL ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YVLQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|449942830|ref|ZP_21806212.1| putative stringent response protein [Streptococcus mutans 11A1]
gi|449149893|gb|EMB53675.1| putative stringent response protein [Streptococcus mutans 11A1]
Length = 740
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 310/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|24380383|ref|NP_722338.1| stringent response protein, ppGpp synthetase [Streptococcus mutans
UA159]
gi|290581316|ref|YP_003485708.1| stringent response protein [Streptococcus mutans NN2025]
gi|397650579|ref|YP_006491106.1| stringent response protein [Streptococcus mutans GS-5]
gi|449864642|ref|ZP_21778500.1| putative stringent response protein [Streptococcus mutans U2B]
gi|449869513|ref|ZP_21780160.1| putative stringent response protein [Streptococcus mutans 8ID3]
gi|449878530|ref|ZP_21783637.1| putative stringent response protein [Streptococcus mutans S1B]
gi|449908491|ref|ZP_21793758.1| putative stringent response protein [Streptococcus mutans OMZ175]
gi|449969227|ref|ZP_21813102.1| putative stringent response protein [Streptococcus mutans 2VS1]
gi|449983773|ref|ZP_21818644.1| putative stringent response protein [Streptococcus mutans NFSM2]
gi|450030621|ref|ZP_21833312.1| putative stringent response protein [Streptococcus mutans G123]
gi|450034381|ref|ZP_21834336.1| putative stringent response protein [Streptococcus mutans M21]
gi|450040883|ref|ZP_21837081.1| putative stringent response protein [Streptococcus mutans T4]
gi|450058894|ref|ZP_21843257.1| putative stringent response protein [Streptococcus mutans NLML4]
gi|450081094|ref|ZP_21851499.1| putative stringent response protein [Streptococcus mutans N66]
gi|450088031|ref|ZP_21854598.1| putative stringent response protein [Streptococcus mutans NV1996]
gi|450092583|ref|ZP_21856088.1| putative stringent response protein [Streptococcus mutans W6]
gi|450100438|ref|ZP_21858768.1| putative stringent response protein [Streptococcus mutans SF1]
gi|450110680|ref|ZP_21862254.1| putative stringent response protein [Streptococcus mutans SM6]
gi|450145723|ref|ZP_21874719.1| putative stringent response protein [Streptococcus mutans 1ID3]
gi|450149159|ref|ZP_21875997.1| putative stringent response protein [Streptococcus mutans 14D]
gi|450163970|ref|ZP_21881041.1| putative stringent response protein [Streptococcus mutans B]
gi|450171293|ref|ZP_21883920.1| putative stringent response protein [Streptococcus mutans SM4]
gi|450174728|ref|ZP_21884759.1| putative stringent response protein [Streptococcus mutans SM1]
gi|24378405|gb|AAN59644.1|AE015027_2 putative stringent response protein, ppGpp synthetase
[Streptococcus mutans UA159]
gi|254998215|dbj|BAH88816.1| putative stringent response protein [Streptococcus mutans NN2025]
gi|392604148|gb|AFM82312.1| stringent response protein [Streptococcus mutans GS-5]
gi|449148979|gb|EMB52804.1| putative stringent response protein [Streptococcus mutans 1ID3]
gi|449158226|gb|EMB61648.1| putative stringent response protein [Streptococcus mutans 8ID3]
gi|449174347|gb|EMB76841.1| putative stringent response protein [Streptococcus mutans 2VS1]
gi|449181029|gb|EMB83161.1| putative stringent response protein [Streptococcus mutans NFSM2]
gi|449192573|gb|EMB93988.1| putative stringent response protein [Streptococcus mutans G123]
gi|449196484|gb|EMB97749.1| putative stringent response protein [Streptococcus mutans M21]
gi|449198334|gb|EMB99451.1| putative stringent response protein [Streptococcus mutans T4]
gi|449203549|gb|EMC04406.1| putative stringent response protein [Streptococcus mutans NLML4]
gi|449215571|gb|EMC15753.1| putative stringent response protein [Streptococcus mutans N66]
gi|449216951|gb|EMC17030.1| putative stringent response protein [Streptococcus mutans NV1996]
gi|449218136|gb|EMC18158.1| putative stringent response protein [Streptococcus mutans W6]
gi|449220417|gb|EMC20288.1| putative stringent response protein [Streptococcus mutans SF1]
gi|449224680|gb|EMC24306.1| putative stringent response protein [Streptococcus mutans SM6]
gi|449234882|gb|EMC33868.1| putative stringent response protein [Streptococcus mutans 14D]
gi|449242427|gb|EMC41013.1| putative stringent response protein [Streptococcus mutans B]
gi|449244244|gb|EMC42626.1| putative stringent response protein [Streptococcus mutans SM4]
gi|449248184|gb|EMC46445.1| putative stringent response protein [Streptococcus mutans SM1]
gi|449249393|gb|EMC47525.1| putative stringent response protein [Streptococcus mutans S1B]
gi|449262905|gb|EMC60343.1| putative stringent response protein [Streptococcus mutans OMZ175]
gi|449264713|gb|EMC62048.1| putative stringent response protein [Streptococcus mutans U2B]
Length = 740
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 310/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|385260670|ref|ZP_10038813.1| GTP diphosphokinase [Streptococcus sp. SK140]
gi|385190913|gb|EIF38341.1| GTP diphosphokinase [Streptococcus sp. SK140]
Length = 738
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E+ +T K I
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 203/537 (37%), Positives = 306/537 (56%), Gaps = 60/537 (11%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
ED+ E+L ++ I L+ +++ +++A LA +AH GQKR +GEP+I HP+ VA IL
Sbjct: 59 EDAYEKLINRVKKYI--LNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLSVAYILS 116
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD +I A LLHD EDT+ T E IE +FG + +V+G V+KL + K KN+
Sbjct: 117 ELELDRNAIVAALLHDVAEDTDT-TLEDIENQFGKEIAFLVDG---VTKLSQFKYKNK-- 170
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
+D + ++ ++MFLAM E+VRV+I+KLADRLHNMRTL K+ +A ET++++APL
Sbjct: 171 --EDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIYAPL 228
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+Y IK ELE+L F Y EDY + ++ + + E +E+ +L +KI
Sbjct: 229 AHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKI----- 283
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
D +K I K YSIYK + + ++++ + +R+I+ P
Sbjct: 284 -DETNIKAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ----------- 331
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY VLG+VH +W P+P+ KDYIA PKPN YQSLHTT+I + +E+QIRT EM
Sbjct: 332 -CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQP---VEIQIRTWEMH 387
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
++E GIAAH+ R G + N+ +I WL I EWQ+
Sbjct: 388 HVSEYGIAAHW-----------------RYKEGNSN--NSQKFDSKIGWLRRILEWQD-- 426
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+E ++ + D+ VFVFTP+G++ NLPKG+T +D+AY IHT++GN V AK+
Sbjct: 427 --TENPKELMNAVKLDVFSDEVFVFTPKGDVINLPKGSTSIDFAYRIHTDVGNHCVGAKI 484
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
N +V L N ++V I+T + + K ++ WL ++ KI + + +
Sbjct: 485 NNKIVPLETKLKNGDIVSIVT--SKTGKPSY----DWLNMVCATESKSKIRNWFKRE 535
>gi|293364924|ref|ZP_06611641.1| GTP diphosphokinase [Streptococcus oralis ATCC 35037]
gi|307703177|ref|ZP_07640123.1| RelA/SpoT family protein [Streptococcus oralis ATCC 35037]
gi|291316374|gb|EFE56810.1| GTP diphosphokinase [Streptococcus oralis ATCC 35037]
gi|307623252|gb|EFO02243.1| RelA/SpoT family protein [Streptococcus oralis ATCC 35037]
Length = 738
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|375088782|ref|ZP_09735120.1| RelA/SpoT family protein [Dolosigranulum pigrum ATCC 51524]
gi|374561747|gb|EHR33086.1| RelA/SpoT family protein [Dolosigranulum pigrum ATCC 51524]
Length = 490
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 304/523 (58%), Gaps = 54/523 (10%)
Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
++Y+S + V+RA LA +AH GQ R+SGE FI HPV+VA IL EL +D ++A G L
Sbjct: 17 LTYMSSEHVTFVKRAYDLAEKAHAGQMRKSGEQFISHPVQVAAILAELRMDPVTVATGFL 76
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD VEDT T+ I E F V +V+G V+KLGK K K S ++ +A++ R+M
Sbjct: 77 HDVVEDTEY-TYADIAELFNPEVADLVDG---VTKLGKFKFK----SKKEHQAENHRKML 128
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
+AM ++VRV++VKLADRLHNMRTLS+ KQ IATET++++APLA LG+ +IK ELE
Sbjct: 129 IAMAQDVRVVLVKLADRLHNMRTLSYHRKEKQVDIATETMEIYAPLADRLGISRIKWELE 188
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
++S YTN++ Y ++ + ++ E+ +E A + + + D + ++ +I
Sbjct: 189 DISLRYTNSQQYYRIVHMMNSRREDRERYIENAKATIQEAV------DELDIEADITGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K +SIYK + + +E+ + LR+I+ P CY VLG +H W
Sbjct: 243 KHIFSIYKKMRNQKKQFSEIYDLLALRVIV---------PSIKD---CYGVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+ L LEVQIRT +M IAE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTV---LGPDATPLEVQIRTFKMHEIAEYGVAAHWAYK 347
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
G T + ISW I E Q E + T+ +F+D+I
Sbjct: 348 -----------------EGITTKAPTDEMDQHISWFRDIIELQTE---SNTASDFMDSIK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
+D+ +V+VF+P+G++ LP+ ++ +D+AY +HTE+GN+ AKVNG +V + L N
Sbjct: 388 QDIFKDKVYVFSPKGDVMELPRDSSTLDFAYHVHTEVGNQSTGAKVNGKIVPLNYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VE++T S S+F + WL++ T A+++I F + Q
Sbjct: 448 DIVEMLT-----SSSSFGPSRDWLKYVNTSKAKNRIKHFFKTQ 485
>gi|379727159|ref|YP_005319344.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
gi|376318062|dbj|BAL61849.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
Length = 739
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/542 (36%), Positives = 312/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+ + LV++AL A +AH+GQ R+SGEP+IIHP++VA IL +L +D ++A G LHD
Sbjct: 19 YMGSEHVALVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + T + +++EFG ++ +V+G V+KLGK+K K+ + A++ R+M LA
Sbjct: 79 VVEDTEI-TLDDLKDEFGESIAVLVDG---VTKLGKIKYKSHEEQL----AENHRKMLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL ++ KQ IA ETL+++APLA LG+ ++K ELE+
Sbjct: 131 MAQDLRVILVKLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N Y ++ ++ K +E + I E + + + EI K
Sbjct: 191 ALRYINPNQYYRI------VHLMQSKRIERESYIAQAVDEICYVTNELGISAEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +R+II + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVII------------DSIKDCYAVLGAIHTKWMPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I + +E+QIRT EM IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKTNMYQSIHTTVIGPMGNP---IEIQIRTREMHKIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK L + +++ ++ W I E Q+E + + EF++++ D
Sbjct: 348 ---------------EGKADRLKSNDLSKQLDWFREIVELQDE---SYNASEFMESVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP GE+ LPKG+ +D+AY IHTEIGNK AKVNG +V + L N ++
Sbjct: 390 IFSDKVYVFTPNGEVSELPKGSGPLDFAYNIHTEIGNKTTGAKVNGKIVQLDYSLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+E++T S ++F + WL+ KT A+++I +F + Q + + +++D
Sbjct: 450 IEVLT-----SANSFGPSRDWLKLVKTSKAKNRIKRFFKVQDREENVVKGQEALAKYLSD 504
Query: 680 SG 681
+G
Sbjct: 505 NG 506
>gi|322373769|ref|ZP_08048304.1| GTP pyrophosphokinase [Streptococcus sp. C150]
gi|321277141|gb|EFX54211.1| GTP pyrophosphokinase [Streptococcus sp. C150]
Length = 739
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A EAH+GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATEAHNGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGLDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++F Y N ++ K ++ + KE +E EE ++ KI+ + + +I K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDDIVAKIK--TYTSEQGLVGDIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|51893575|ref|YP_076266.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
gi|51857264|dbj|BAD41422.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
Length = 735
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 307/537 (57%), Gaps = 72/537 (13%)
Query: 133 DLRPTI----SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
D++P + SY ++ L+ A A +AH+GQ RRSGEP+I HP+ VA I+ LELD
Sbjct: 6 DIQPLLDKVRSYNPTADVALIDNAFAFAKQAHEGQCRRSGEPYITHPIAVAEIVASLELD 65
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
ESIAA LLHD +ED V +E +EE FG V +V+G VSKL +L+ + + +
Sbjct: 66 EESIAAALLHDVLEDCGV-KYEELEERFGKEVATLVDG---VSKLDRLQFTSRDEA---- 117
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+ ++LR+MFLAM +++RVI++KLADRLHNMRTL H P Q IA ET+ ++APLA LG
Sbjct: 118 QVENLRKMFLAMAKDLRVILIKLADRLHNMRTLKHQPSDAQVRIAQETMDIYAPLAHRLG 177
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+L+F + Y + +A L +E + LM ++ + L+
Sbjct: 178 LSEIKWELEDLAFRILEPDRY----QEMAYLVARKRQERMAITQDLMDQLR--EVLEKEG 231
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ EI K YSIYK + + I+++ + +RII++ + CY V
Sbjct: 232 IQAEISGRPKHFYSIYKKMYRQGKDISQIYDLIAIRIIVE------------EVKDCYAV 279
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG++H W P+P KDYIATPKPN YQSLHTT+I PF E+QIRT EM
Sbjct: 280 LGIIHSHWKPLPLRFKDYIATPKPNMYQSLHTTVIGPHGEPF--------EIQIRTREMH 331
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE G+AAH+S + GKT + ++ WL ++ EW +E
Sbjct: 332 RTAEFGVAAHWSYK-----------------EGKT----DKEFDRKLQWLRSLLEWHQEI 370
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+REFV+++ D+ +VFVF+P+G + +LP G T +D+A+ +H++IG + V AKV
Sbjct: 371 ---RDAREFVESVKVDIFSDQVFVFSPKGHVFSLPAGGTPLDFAFAVHSDIGYRCVGAKV 427
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG + L N +VVEI+T SK + WL+ KT SA++KI +F + +
Sbjct: 428 NGKIAPLDTALKNGDVVEILT-----SKQSPGPSIDWLKIVKTASAKNKIRQFFKRE 479
>gi|319940232|ref|ZP_08014584.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
gi|319810534|gb|EFW06870.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
Length = 738
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ LV++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVALVQKALVYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDTNA-TLDDLEREFGHEVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE ++ KIE + + EI
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----STNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
Length = 753
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 298/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++P++L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTPDQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N ++Y K+ + E E +++A L LD + + +I K
Sbjct: 191 SFHYINPDEYYKIVSMMDAKRSEREGYIKDAIDYLKGT------LDSLGIDYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRT+EM +AE G+AAH++
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTKEMHEVAEYGVAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ R N K AL IS I E Q+E + + EF+ + D
Sbjct: 346 ------YKRGNFDGVEAKEGG------ALDIS--REILELQKE---SSNADEFMQAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFSDKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E +T A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVQTSRAKNKIRRYFRD 482
>gi|419706966|ref|ZP_14234473.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
salivarius PS4]
gi|383283394|gb|EIC81351.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
salivarius PS4]
Length = 739
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A EAH+GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATEAHNGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGLDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++F Y N ++ K ++ + KE +E EE ++ KI+ + + +I K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVAKIK--TYTSEQGLVGDIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 209/532 (39%), Positives = 308/532 (57%), Gaps = 63/532 (11%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ E+L I +P+ E+EL+ A LA E H QKR SGEP+I+HP VA IL ++ +D
Sbjct: 1 MIEELLEKIKIYNPSVEVELIEEAFNLASEHHKKQKRNSGEPYIVHPFNVALILADMNMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I AGLLHDT+EDT+V T+E I++EFG + +VEG TK+ KL + Q+
Sbjct: 61 TATIIAGLLHDTIEDTDV-TYEDIKKEFGVEIADLVEGVTKLKKLNY-------QTKQEK 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM ++RVIIVKLADRLHNMRTL +M K+ A ETL+++AP+A LG
Sbjct: 113 QAENIRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTDAKKHEKALETLEIYAPIADRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKI--EDDQFLDL 366
M +IK ELE+LS Y + E+Y ++ V + HE+E L+ KI E ++ L+
Sbjct: 173 MSKIKWELEDLSLRYLDPENYYQLVEMVNK--RRHEREA------LISKITLEIEKNLNK 224
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+ + +I K YSIYK + + +E+ ++ +R+ L + CY
Sbjct: 225 IGIHADIHGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRV------------LVDDIKDCY 272
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
VLG+VH +W PIP KDYIA PKPN YQSLHTT+I E+ EVQIRT EM A
Sbjct: 273 GVLGVVHTLWKPIPGRFKDYIAMPKPNKYQSLHTTVIDNNGET---FEVQIRTFEMHQTA 329
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + V+ K+ + ++WL + EWQ++
Sbjct: 330 EYGIAAHWKYKAGVS---------------KSTSFDE-----NLTWLRQLLEWQKDL--- 366
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
+F++T+ D VF+FTPRG++ NLP+G+T +D+AY IH+ +GNK AK+NG
Sbjct: 367 NDPNDFMETLKIDFFADEVFIFTPRGDVINLPEGSTPIDFAYRIHSAVGNKCTGAKINGR 426
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+V + L + ++V++IT N S S WL K+ A+ KI ++ +
Sbjct: 427 IVPLNYKLKSGDIVDVIT-NPNSGPSL-----DWLNIVKSPQAKKKISQYFK 472
>gi|387762136|ref|YP_006069113.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
gi|339292903|gb|AEJ54250.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
Length = 739
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N ++ K ++ + KE +E EE ++ KI+ + + ++ K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|315612694|ref|ZP_07887606.1| GTP diphosphokinase [Streptococcus sanguinis ATCC 49296]
gi|331266875|ref|YP_004326505.1| GTP pyrophosphokinase [Streptococcus oralis Uo5]
gi|406587662|ref|ZP_11062516.1| GTP pyrophosphokinase [Streptococcus sp. GMD1S]
gi|417940275|ref|ZP_12583563.1| RelA/SpoT family protein [Streptococcus oralis SK313]
gi|419813840|ref|ZP_14338650.1| GTP pyrophosphokinase [Streptococcus sp. GMD2S]
gi|419816886|ref|ZP_14341058.1| GTP pyrophosphokinase [Streptococcus sp. GMD4S]
gi|315315281|gb|EFU63321.1| GTP diphosphokinase [Streptococcus sanguinis ATCC 49296]
gi|326683547|emb|CBZ01165.1| GTP pyrophosphokinase, putative stringent response protein
[Streptococcus oralis Uo5]
gi|343389156|gb|EGV01741.1| RelA/SpoT family protein [Streptococcus oralis SK313]
gi|404466650|gb|EKA11968.1| GTP pyrophosphokinase [Streptococcus sp. GMD4S]
gi|404472538|gb|EKA16958.1| GTP pyrophosphokinase [Streptococcus sp. GMD2S]
gi|404472859|gb|EKA17256.1| GTP pyrophosphokinase [Streptococcus sp. GMD1S]
Length = 738
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|82751232|ref|YP_416973.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
gi|82656763|emb|CAI81192.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
Length = 736
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTYDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|343521362|ref|ZP_08758330.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396568|gb|EGV09105.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
Length = 717
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 304/538 (56%), Gaps = 61/538 (11%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ E+L I +PN ++E + +A E H+GQ R SGEP+ IHPV VA IL +L +D
Sbjct: 1 MLEELLSKIKSYNPNADVEKITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I AGL+HD +EDT V TFE++ E F + +V+G V+KL K+K + S Q+
Sbjct: 61 DATIIAGLMHDILEDTEV-TFEQMAEMFDEEIANLVDG---VTKLKKIKYQ----SKQES 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD+LR+M LAM ++RVII+K+ADRLHN+RTL +M KQ A ETL+++APLA LG
Sbjct: 113 QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLM 367
M +K ELE+LS Y E Y + RV +K+ E KI+ IE+ L
Sbjct: 173 MSNVKWELEDLSLRYLEPEIYYDLAERV-------KKKRSEREKIINDIIEEISISLKEH 225
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++ EI K YSIYK + K S +E+ + +RII+ P S CY
Sbjct: 226 NIQGEISGRPKSLYSIYKKMYKQNKSFDEIFDLTAVRIIV---------PTISD---CYA 273
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG+VH W PIP KDYIA PKPN YQSLH TLI S EVQIRT EM AE
Sbjct: 274 VLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLIS---NSGDVFEVQIRTFEMHKTAE 330
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + V ++ ++ +++WL + +WQ E N
Sbjct: 331 YGIAAHWKYKAGV---------------DRSTSFDD-----KLTWLRQLMDWQREVNDN- 369
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
REF+ + D + VFVF+P+G++ NL GAT +D+AY +HT +GN V AKV+G +
Sbjct: 370 --REFITSFKEDFVSDEVFVFSPKGDVINLIAGATPIDFAYKVHTAVGNNCVGAKVDGRI 427
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK-FLREQAALS 664
V + L N +VEI+T N SS + K WL+ K+ AR KI + F +E AL+
Sbjct: 428 VPLNYKLKNGNIVEILT-NPNSSGPS----KDWLKIVKSSQARTKIKQWFKKENKALN 480
>gi|332686842|ref|YP_004456616.1| GTP pyrophosphokinase [Melissococcus plutonius ATCC 35311]
gi|332370851|dbj|BAK21807.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Melissococcus
plutonius ATCC 35311]
Length = 739
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 198/542 (36%), Positives = 312/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+ + LV++AL A +AH+GQ R+SGEP+IIHP++VA IL +L +D ++A G LHD
Sbjct: 19 YMGSEHVALVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT + T + +++EFG ++ +V+G V+KLGK+K K+ + A++ R+M LA
Sbjct: 79 VVEDTEI-TLDDLKDEFGESIAVLVDG---VTKLGKIKYKSHEEQL----AENHRKMLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL ++ KQ IA ETL+++APLA LG+ ++K ELE+
Sbjct: 131 MAQDLRVILVKLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N Y ++ ++ K +E + I E + + + EI K
Sbjct: 191 ALRYINPNQYYRI------VHLMQSKRIERESYIAQAVDEICYVTNELGISAEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +R+II + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVII------------DSIKDCYAVLGAIHTKWMPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQS+HTT+I + +E+QIRT EM IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKTNMYQSIHTTVIGPMGNP---IEIQIRTREMHKIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK L + +++ ++ W I E Q+E + + EF++++ D
Sbjct: 348 ---------------EGKADRLKSNDLSKQLDWFREIVELQDE---SYNASEFMESVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP GE+ LPKG+ +D+AY IHTEIGNK AKVNG +V + L N ++
Sbjct: 390 IFSDKVYVFTPNGEVSELPKGSGPLDFAYNIHTEIGNKTTGAKVNGKIVQLDYPLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
+E++T S ++F + WL+ KT A+++I +F + Q + + +++D
Sbjct: 450 IEVLT-----SANSFGPSRDWLKLVKTSKAKNRIKRFFKVQDREENVVKGQEALAKYLSD 504
Query: 680 SG 681
+G
Sbjct: 505 NG 506
>gi|355673973|ref|ZP_09059325.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
gi|354814096|gb|EHE98697.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
Length = 761
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 319/545 (58%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L+ DL TI P +++ ++++A +A EAH Q+R+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEELYLDLIKTIRKYHPSDDITMIQKAYKIADEAHKEQRRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+IAAGLLHD VEDT ++T +++ +EFG+ V +V+G TK+++L K K E
Sbjct: 82 LEMDKETIAAGLLHDVVEDT-IMTLDQLTKEFGSEVSFLVDGVTKLTQLNWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++AD+LR+MFLAM +++RVII+KLADRLHNMRT + P KQ A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK EL++LS + E Y + +V DL K +A + +++I D+
Sbjct: 195 DRLGISKIKIELDDLSLKFLKPEVYYDLVEKV-DLRK-------DARETFVQEIVDEVKS 246
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ V+ + K +SIYK ++ +++++ + +RI+++
Sbjct: 247 HMKEAGVEATVGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TV 294
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QI
Sbjct: 295 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGGNGQPF--------EIQI 346
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM AE GIAAH+ + +G V ++SWL I
Sbjct: 347 RTYEMHRTAEYGIAAHWKYKESGSGQVQAGSEEA-----------------KLSWLRQIL 389
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ + S+EF+ + DL V+ FTP G++K LP G+T +D+AY IH+ +G
Sbjct: 390 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLPSGSTPIDFAYCIHSAVG 446
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG LV +V+ N + +EIIT S+++ + WL K+ A++KI +
Sbjct: 447 NKMVGARVNGKLVPIEYVIQNGDQLEIIT-----SQNSKGPSRDWLNIVKSTQAKNKINQ 501
Query: 656 FLREQ 660
+ + Q
Sbjct: 502 WFKNQ 506
>gi|319945699|ref|ZP_08019950.1| GTP diphosphokinase [Streptococcus australis ATCC 700641]
gi|417919041|ref|ZP_12562582.1| RelA/SpoT family protein [Streptococcus australis ATCC 700641]
gi|319748059|gb|EFW00302.1| GTP diphosphokinase [Streptococcus australis ATCC 700641]
gi|342834628|gb|EGU68892.1| RelA/SpoT family protein [Streptococcus australis ATCC 700641]
Length = 739
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSGEDVAFVEKALLYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISQETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE +++KIE + + +I
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--SYAAERHLYGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I++ SP + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------SPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|398813763|ref|ZP_10572455.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
gi|398038063|gb|EJL31236.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
Length = 723
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 311/529 (58%), Gaps = 55/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ +YLS ++++L+ RA LA +AH+GQ R+SG P+I+HP+ VA IL L +D +
Sbjct: 7 EIVKKASTYLSQSDMDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAAG LHD VEDT + T + + E+FG V +V+G TK+ K+ K K K E A+
Sbjct: 67 IAAGFLHDVVEDTEI-TLDHLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M +AM +++RVI++KLADRLHNMRTL HM KQ I+ ETL++FAPLA LG+
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
+K ELE+ + Y N + Y ++ + E E L EA+ + +K+ + + ++
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSI+K + + NE+ + LRII+ + + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT+I E LEVQIRT +M AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK++ + A ++ L I E E N ++E
Sbjct: 338 AHWAYK-----------------EGKSIV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ +DL VFVFTP+G++ LPKG+ +D++Y IH+ +GN+ + AKVNG +V
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ + ++VEI+T SK ++ + WL+ AK+ AR+KI ++ +++
Sbjct: 437 YAMKTGDIVEILT-----SKHSYGPSQDWLKMAKSAHARNKIKQWFKKE 480
>gi|314938569|ref|ZP_07845853.1| GTP diphosphokinase [Enterococcus faecium TX0133a04]
gi|314952050|ref|ZP_07855073.1| GTP diphosphokinase [Enterococcus faecium TX0133A]
gi|314995190|ref|ZP_07860304.1| GTP diphosphokinase [Enterococcus faecium TX0133a01]
gi|313590599|gb|EFR69444.1| GTP diphosphokinase [Enterococcus faecium TX0133a01]
gi|313595840|gb|EFR74685.1| GTP diphosphokinase [Enterococcus faecium TX0133A]
gi|313642126|gb|EFS06706.1| GTP diphosphokinase [Enterococcus faecium TX0133a04]
Length = 737
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 303/523 (57%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++S + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSSFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|418884672|ref|ZP_13438855.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377711924|gb|EHT36149.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
Length = 700
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|322392295|ref|ZP_08065756.1| GTP diphosphokinase [Streptococcus peroris ATCC 700780]
gi|321144830|gb|EFX40230.1| GTP diphosphokinase [Streptococcus peroris ATCC 700780]
Length = 738
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 205/524 (39%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGE +IIHP++VA IL +L+LD S+A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEHYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SFEKQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K + L KE +E E ++KK+E ++ + +I
Sbjct: 188 EDLSFRYLNPTEFYK----ITTLMKEKRQEREALVDEVVKKLE--EYSSERNLTGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SDDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|57650515|ref|YP_186528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
gi|88195445|ref|YP_500249.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|221141097|ref|ZP_03565590.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|284024690|ref|ZP_06379088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 132]
gi|384550458|ref|YP_005739710.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384862233|ref|YP_005744953.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384870173|ref|YP_005752887.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
gi|385781917|ref|YP_005758088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143236|ref|YP_005731629.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
gi|387602972|ref|YP_005734493.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ST398]
gi|387780722|ref|YP_005755520.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|404478985|ref|YP_006710415.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
gi|415682436|ref|ZP_11447752.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|415686173|ref|ZP_11450310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
gi|416839675|ref|ZP_11903056.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
gi|416846584|ref|ZP_11906633.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
gi|417649291|ref|ZP_12299095.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
gi|417653377|ref|ZP_12303108.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
gi|417797567|ref|ZP_12444763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
gi|417799958|ref|ZP_12447090.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
gi|417887946|ref|ZP_12532065.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
gi|417896907|ref|ZP_12540850.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
gi|417901229|ref|ZP_12545106.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
gi|417903131|ref|ZP_12546986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
gi|418277930|ref|ZP_12892150.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
gi|418285658|ref|ZP_12898326.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
gi|418309946|ref|ZP_12921496.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
gi|418318525|ref|ZP_12929927.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
gi|418321376|ref|ZP_12932722.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
gi|418560386|ref|ZP_13124901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
gi|418564712|ref|ZP_13129133.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
gi|418571915|ref|ZP_13136135.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
gi|418574398|ref|ZP_13138567.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
gi|418579557|ref|ZP_13143652.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418582560|ref|ZP_13146638.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597458|ref|ZP_13160986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
gi|418597992|ref|ZP_13161506.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
gi|418601540|ref|ZP_13164966.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
gi|418641811|ref|ZP_13204016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
gi|418644086|ref|ZP_13206237.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|418648467|ref|ZP_13210511.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
gi|418650678|ref|ZP_13212696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
gi|418654995|ref|ZP_13216878.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|418660671|ref|ZP_13222290.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
gi|418872843|ref|ZP_13427169.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875573|ref|ZP_13429829.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418892363|ref|ZP_13446476.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418898269|ref|ZP_13452339.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901138|ref|ZP_13455194.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418903939|ref|ZP_13457980.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906577|ref|ZP_13460603.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418909485|ref|ZP_13463480.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|418917531|ref|ZP_13471490.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923315|ref|ZP_13477231.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418925891|ref|ZP_13479793.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418928982|ref|ZP_13482868.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418946741|ref|ZP_13499153.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|418953538|ref|ZP_13505527.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
gi|418982639|ref|ZP_13530347.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986307|ref|ZP_13533991.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|419773205|ref|ZP_14299216.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
gi|421148486|ref|ZP_15608146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424785467|ref|ZP_18212270.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
gi|440707473|ref|ZP_20888172.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
gi|440735083|ref|ZP_20914694.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443639864|ref|ZP_21123864.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
gi|57284701|gb|AAW36795.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
gi|87203003|gb|ABD30813.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|269941119|emb|CBI49505.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
gi|283470910|emb|CAQ50121.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ST398]
gi|302333307|gb|ADL23500.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302751462|gb|ADL65639.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|315195536|gb|EFU25923.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|315198666|gb|EFU28994.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
gi|323440813|gb|EGA98522.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
gi|323442838|gb|EGB00463.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
gi|329314308|gb|AEB88721.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
gi|329728397|gb|EGG64834.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
gi|329733068|gb|EGG69405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
gi|334267059|gb|EGL85529.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
gi|334272490|gb|EGL90855.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
gi|341840173|gb|EGS81693.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
gi|341846388|gb|EGS87585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
gi|341850305|gb|EGS91429.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
gi|341856975|gb|EGS97802.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
gi|344177824|emb|CCC88303.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|364522906|gb|AEW65656.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
11819-97]
gi|365169468|gb|EHM60716.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
gi|365172889|gb|EHM63551.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
gi|365225608|gb|EHM66851.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
gi|365237403|gb|EHM78249.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
gi|365242988|gb|EHM83683.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
gi|371971946|gb|EHO89337.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
gi|371975849|gb|EHO93141.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
gi|371978407|gb|EHO95656.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
gi|371979125|gb|EHO96360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
gi|374394585|gb|EHQ65867.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
gi|374398254|gb|EHQ69438.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
gi|374400300|gb|EHQ71418.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
gi|375018266|gb|EHS11846.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
gi|375026380|gb|EHS19763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
gi|375026607|gb|EHS19987.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|375027964|gb|EHS21322.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
gi|375031476|gb|EHS24756.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
gi|375038457|gb|EHS31437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|375366783|gb|EHS70764.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|375374758|gb|EHS78381.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
gi|375377521|gb|EHS80983.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|377697584|gb|EHT21939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377702535|gb|EHT26857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377703685|gb|EHT27998.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377704920|gb|EHT29229.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377710970|gb|EHT35208.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377730657|gb|EHT54724.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377735274|gb|EHT59310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377738894|gb|EHT62903.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377742954|gb|EHT66939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377744960|gb|EHT68937.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377750705|gb|EHT74643.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377751862|gb|EHT75789.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|377761304|gb|EHT85180.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377763482|gb|EHT87338.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377769645|gb|EHT93413.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|383973029|gb|EID89050.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
gi|394331629|gb|EJE57712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|404440474|gb|AFR73667.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
gi|421956877|gb|EKU09206.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
gi|436431178|gb|ELP28532.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506229|gb|ELP42068.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
gi|443406139|gb|ELS64723.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
Length = 729
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
Length = 753
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 297/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++P++L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTPDQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N ++Y K+ + E E +++A L LD + + +I K
Sbjct: 191 SFHYINPDEYYKIVSMMDAKRSEREGYIKDAIDYLKGT------LDSLGIDYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRT+EM +AE G+AAH++
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTKEMHEVAEYGVAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ R N K AL IS I E Q+E + + EF+ + D
Sbjct: 346 ------YKRGNFDGVEAKEGG------ALDIS--REILELQKE---SSNADEFMQAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 FFSDKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E +T A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVQTSRAKNKIRRYFRD 482
>gi|167767126|ref|ZP_02439179.1| hypothetical protein CLOSS21_01644 [Clostridium sp. SS2/1]
gi|167711101|gb|EDS21680.1| RelA/SpoT family protein [Clostridium sp. SS2/1]
gi|291559545|emb|CBL38345.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SSC/2]
Length = 765
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 314/551 (56%), Gaps = 69/551 (12%)
Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
S D+F PE L L T+ S ++E V RA +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18 SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL ELELD E+I AGLLHD VEDT T E I +FG V ++V+G TK+ +L
Sbjct: 76 CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
K K E V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ M P KQ + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
+ ++AP+A LG+ +IK EL++L+ Y + Y ++R + +E E ++E ++
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAFIQE----IVD 244
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
+++ +D +K EI K +SIYK ++ +I+++ + +RI +
Sbjct: 245 EVKG--HIDRAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344
Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
E+QIRT EM +AE GIAAH+ + T LN ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
WL + EWQ + N +EF+ + DL +V+ FTP G++KNL G+T +D+AY
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441
Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSA 649
IH+ +GNKMV A+VNG V + L N + VEIIT S+++ + WL K+ A
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT-----SQNSKGPSRDWLGIVKSAQA 496
Query: 650 RHKIMKFLREQ 660
R KI ++ + Q
Sbjct: 497 RSKINQWFKRQ 507
>gi|409386207|ref|ZP_11238654.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
4877]
gi|399206527|emb|CCK19569.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
4877]
Length = 736
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 320/545 (58%), Gaps = 55/545 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+ ++ LV++AL+ A AH Q R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TERYMGERDIILVKKALVYATNAHKEQYRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR I +G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTES-TLDDLEAEFGPEVRIITDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ P KQ I+ ET+ ++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDMRVILVKLADRLHNMRTLKHLRPDKQKRISRETMAIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y + ++ +++ + + + E+ +EE + K++D + + V EI
Sbjct: 188 EDLSFRYLDEIEFYRIRGLMKEKRADRERLVEE----VTSKLKD--YTEKAGVVGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ + S V Y LG +H +W
Sbjct: 242 PKHIYSIYRKMHDKKKRFDELYDLIAVRCIL--ETTSDV----------YTTLGYIHDLW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E QIRT EM IAE G+AAH++
Sbjct: 290 KPMPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTREMHEIAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G+ ++ I ++W++ + E Q+E + +++FV +
Sbjct: 346 KA-----------------GRKDKVSANEITQNLNWIHELVELQDE---SNDAQDFVKAV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L +++VFTP G ++ LP G+ +D+AY IHT++G+K V AKVNG + THVL
Sbjct: 386 QEDILSEKIYVFTPAGAVQELPAGSGPIDFAYAIHTQVGDKAVGAKVNGRMTPLTHVLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDF 676
+VVEI+T +K++F + W++ KT AR+KI +F + Q + D + ++
Sbjct: 446 GDVVEIVT-----NKTSFGPSRDWIKLVKTNKARNKIKQFFKNQDKELSINKGRDMLQEY 500
Query: 677 VADSG 681
+ + G
Sbjct: 501 LQEHG 505
>gi|340397999|ref|YP_004727024.1| putative GTP pyrophosphokinase [Streptococcus salivarius CCHSS3]
gi|387783264|ref|YP_006069347.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius
JIM8777]
gi|338741992|emb|CCB92497.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius CCHSS3]
gi|338744146|emb|CCB94512.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius
JIM8777]
Length = 739
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N ++ K ++ + KE +E EE ++ KI+ + + ++ K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|160878706|ref|YP_001557674.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium phytofermentans ISDg]
gi|160427372|gb|ABX40935.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium phytofermentans ISDg]
Length = 813
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 311/543 (57%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SP+ L+E L TI P+ ++E+V +A +A AH Q R+SGEP+IIHP+ VA IL E
Sbjct: 76 SPDELYEILLKTIRAYHPSTDVEIVEKAYKIATFAHKDQLRKSGEPYIIHPLCVAIILAE 135
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AG+LHD VEDT V+T + +EFG V +V+G TK+++L K K E
Sbjct: 136 LELDKETIVAGILHDVVEDT-VLTVSELTKEFGEEVALLVDGVTKLTQLNYSKDKVE--- 191
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVI++KLADRLHNMRT+ + P KQ + ET+ ++AP+A
Sbjct: 192 ---IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQTPKKQIEKSRETMDIYAPIA 248
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ IK EL++LS Y E Y ++ ++A +E E + + + K I +
Sbjct: 249 QRLGISMIKIELDDLSLQYLEPEVYKELNEKIASKKEEREAFINSIVEDVGKHIAE---- 304
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ +I K +SIYK ++ ++ ++ + +RI++ +
Sbjct: 305 --ANISAKIDGRVKHFFSIYKKMVNQGKTLEQIYDLFAVRIVV------------DTVKD 350
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 351 CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPF--------EIQIRT 402
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + GH N R +++WL I EW
Sbjct: 403 FEMHRTAEYGIAAHWKYK------EGHDGKNTRDTE-----------EAKLTWLRQILEW 445
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N +EF+ + DL V+ FTP G++KNLP G+ VD+AY IH+ +GNK
Sbjct: 446 QRDLSDN---KEFLSLLKNDLDLFSDSVYCFTPTGDVKNLPAGSNPVDFAYSIHSAVGNK 502
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV +V+ N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 503 MVGARVNGRLVPIDYVIQNGDRIEIMT-----SQNSKGPSRDWLNIVKSTQAKNKINQWF 557
Query: 658 REQ 660
+ +
Sbjct: 558 KTE 560
>gi|282928269|ref|ZP_06335874.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
gi|282590076|gb|EFB95158.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
Length = 736
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|419781279|ref|ZP_14307111.1| GTP diphosphokinase [Streptococcus oralis SK100]
gi|383184671|gb|EIC77185.1| GTP diphosphokinase [Streptococcus oralis SK100]
Length = 738
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ +SW+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMSWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|307709582|ref|ZP_07646035.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
gi|307619618|gb|EFN98741.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|417889932|ref|ZP_12534011.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
gi|418282064|ref|ZP_12894853.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
gi|418307492|ref|ZP_12919197.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
gi|418889447|ref|ZP_13443580.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
gi|341855625|gb|EGS96469.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
gi|365171614|gb|EHM62439.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
gi|365245586|gb|EHM86210.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
gi|377752955|gb|EHT76873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 729
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|418446239|ref|ZP_13017712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
gi|387735171|gb|EIK22308.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|253732290|ref|ZP_04866455.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724079|gb|EES92808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|418437259|ref|ZP_13009054.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|418443174|ref|ZP_13014773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
gi|387726919|gb|EIK14456.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|387736850|gb|EIK23938.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|424779945|ref|ZP_18206831.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Catellicoccus
marimammalium M35/04/3]
gi|422843484|gb|EKU27921.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Catellicoccus
marimammalium M35/04/3]
Length = 724
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 304/524 (58%), Gaps = 54/524 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY++ + V++AL A +AH Q R+SGEP+IIHP++VA L E+ D ++AAG LH
Sbjct: 18 SYMTKEDAAFVQKALDFATKAHAPQVRKSGEPYIIHPIQVANTLVEIHTDPCTVAAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T E I EEF V IV+G V+KLGK+K K+ + A++ ++M L
Sbjct: 78 DVVEDTPV-TLEEIAEEFNDDVAAIVDG---VTKLGKIKYKSHEEQL----AENHQKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL ++ P KQ IA ETL+++APLA LGM +IK ELE+
Sbjct: 130 AMAQDLRVILVKLADRLHNMRTLKYLRPDKQRRIAKETLEIYAPLANRLGMSRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y + + Y ++ +A+ +E EK + E + + K++E + + +I K
Sbjct: 190 RSLRYLDPQQYYRIVHLMAEKREEREKYVSEMIREVKKEVEQ------LHIHADINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S E+ + +RII+ + CY +LG VH WTP
Sbjct: 244 HIYSIYRKMHDQKKSFEEIYDLTAIRIIV------------DNIKECYAILGAVHTRWTP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P+ KDYIA PK N YQSLHTT+I +E+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPKRFKDYIAMPKANMYQSLHTTVIG---PGGRPIEIQIRTHEMHKIAEFGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+GK + N ++ W I E Q++ + + EF++++
Sbjct: 348 ----------------QGKKDKVKGDNTDQQLDWFREIIELQKD---SNDASEFMESVKG 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP+GE+ LP G+ +D+AY IHTEIGN + AKVNG +V ++ L N +
Sbjct: 389 DIFKDKVYVFTPKGEVCELPCGSGPLDFAYYIHTEIGNHAIGAKVNGKMVPLSYKLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
++EIIT SK A + WL T A++KI F + Q A
Sbjct: 449 LLEIIT-----SKQAKGPSRDWLNLVATSRAKNKIRHFFKAQTA 487
>gi|417936617|ref|ZP_12579926.1| RelA/SpoT family protein [Streptococcus infantis X]
gi|343400551|gb|EGV13068.1| RelA/SpoT family protein [Streptococcus infantis X]
Length = 738
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APL+ LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLTHLRKDKQERISRETMEIYAPLSHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ + +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRQEREALVDE----VVTKLE--EYSSERNLTGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWA- 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G+ G +N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 345 --YKKGMKGQ--------------VNSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|289167490|ref|YP_003445759.1| GTP pyrophosphokinase, stringent response protein [Streptococcus
mitis B6]
gi|288907057|emb|CBJ21891.1| GTP pyrophosphokinase, stringent response protein [Streptococcus
mitis B6]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG+ VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGSDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|379014840|ref|YP_005291076.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
gi|374363537|gb|AEZ37642.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
Length = 729
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|59798426|sp|Q931Q4.2|RELA_STAAM RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|15927214|ref|NP_374747.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
gi|21283313|ref|NP_646401.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
gi|148268114|ref|YP_001247057.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH9]
gi|150394182|ref|YP_001316857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH1]
gi|269203259|ref|YP_003282528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
gi|296275919|ref|ZP_06858426.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MR1]
gi|387150777|ref|YP_005742341.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
04-02981]
gi|415692758|ref|ZP_11454678.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417651056|ref|ZP_12300819.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
gi|417894333|ref|ZP_12538352.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
gi|417897939|ref|ZP_12541865.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
gi|418314427|ref|ZP_12925901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
gi|418316727|ref|ZP_12928162.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
gi|418567175|ref|ZP_13131540.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
gi|418640299|ref|ZP_13202531.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|418652842|ref|ZP_13214805.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|418661102|ref|ZP_13222704.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|418878550|ref|ZP_13432785.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881316|ref|ZP_13435533.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418886899|ref|ZP_13441046.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418914735|ref|ZP_13468705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919564|ref|ZP_13473509.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931938|ref|ZP_13485773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418934602|ref|ZP_13488424.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418988698|ref|ZP_13536370.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|418991562|ref|ZP_13539223.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419784623|ref|ZP_14310386.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|443636047|ref|ZP_21120165.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
gi|13701432|dbj|BAB42726.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
gi|21204753|dbj|BAB95449.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
gi|147741183|gb|ABQ49481.1| (p)ppGpp synthetase I, SpoT/RelA [Staphylococcus aureus subsp.
aureus JH9]
gi|149946634|gb|ABR52570.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus JH1]
gi|262075549|gb|ACY11522.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
gi|285817316|gb|ADC37803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
04-02981]
gi|315129918|gb|EFT85908.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727240|gb|EGG63696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
gi|341849441|gb|EGS90584.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
gi|341852478|gb|EGS93367.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
gi|365233463|gb|EHM74417.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
gi|365240690|gb|EHM81457.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
gi|371982879|gb|EHP00028.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
gi|375014863|gb|EHS08534.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|375021010|gb|EHS14517.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|375039533|gb|EHS32458.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|377694672|gb|EHT19037.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377713116|gb|EHT37329.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377717791|gb|EHT41966.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377723684|gb|EHT47809.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377724401|gb|EHT48517.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731059|gb|EHT55117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377755391|gb|EHT79290.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767243|gb|EHT91050.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|377770696|gb|EHT94457.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|383363833|gb|EID41159.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|443408556|gb|ELS67075.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
Length = 729
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|49483878|ref|YP_041102.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|87162370|ref|YP_494285.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221748|ref|YP_001332570.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509859|ref|YP_001575518.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257425758|ref|ZP_05602182.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428418|ref|ZP_05604816.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431056|ref|ZP_05607435.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433742|ref|ZP_05610100.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257436657|ref|ZP_05612701.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
gi|258450540|ref|ZP_05698602.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
gi|282904214|ref|ZP_06312102.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
gi|282906040|ref|ZP_06313895.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908953|ref|ZP_06316771.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911270|ref|ZP_06319072.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914439|ref|ZP_06322225.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
gi|282916902|ref|ZP_06324660.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
gi|282919408|ref|ZP_06327143.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
gi|282920183|ref|ZP_06327908.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
gi|282924732|ref|ZP_06332400.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
gi|283770708|ref|ZP_06343600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
gi|283958394|ref|ZP_06375845.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503512|ref|ZP_06667359.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510530|ref|ZP_06669236.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
gi|293531071|ref|ZP_06671753.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
gi|294848663|ref|ZP_06789409.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
gi|297590823|ref|ZP_06949461.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
gi|384547864|ref|YP_005737117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
gi|384867394|ref|YP_005747590.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|386729333|ref|YP_006195716.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
gi|386831240|ref|YP_006237894.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|418978356|ref|ZP_13526157.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
gi|422742582|ref|ZP_16796585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|422746071|ref|ZP_16800004.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|59798275|sp|Q6GG70.1|RELA_STAAR RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|49242007|emb|CAG40705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|87128344|gb|ABD22858.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374548|dbj|BAF67808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368668|gb|ABX29639.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271452|gb|EEV03598.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275259|gb|EEV06746.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278259|gb|EEV08901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281835|gb|EEV11972.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257284008|gb|EEV14131.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
gi|257861698|gb|EEV84497.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
gi|282313567|gb|EFB43962.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
gi|282317218|gb|EFB47592.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
gi|282319389|gb|EFB49741.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
gi|282321620|gb|EFB51945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
gi|282324965|gb|EFB55275.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327217|gb|EFB57512.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331332|gb|EFB60846.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282594531|gb|EFB99516.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
gi|282595832|gb|EFC00796.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
gi|283460855|gb|EFC07945.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
gi|283790543|gb|EFC29360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920339|gb|EFD97405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
gi|291095178|gb|EFE25443.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466894|gb|EFF09414.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
gi|294824689|gb|EFG41112.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
gi|297575709|gb|EFH94425.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
gi|298694913|gb|ADI98135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
gi|312437899|gb|ADQ76970.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|320140479|gb|EFW32333.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144018|gb|EFW35787.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|379993972|gb|EIA15417.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
gi|384230626|gb|AFH69873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
gi|385196632|emb|CCG16262.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|49486467|ref|YP_043688.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|253733115|ref|ZP_04867280.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257793707|ref|ZP_05642686.1| ppGpp hydrolase [Staphylococcus aureus A9781]
gi|258410994|ref|ZP_05681274.1| ppGpp hydrolase [Staphylococcus aureus A9763]
gi|258420205|ref|ZP_05683160.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
gi|258438207|ref|ZP_05689491.1| ppGpp hydrolase [Staphylococcus aureus A9299]
gi|258443670|ref|ZP_05692009.1| ppGpp hydrolase [Staphylococcus aureus A8115]
gi|258446877|ref|ZP_05695031.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
gi|258448791|ref|ZP_05696903.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
gi|258453609|ref|ZP_05701587.1| ppGpp hydrolase [Staphylococcus aureus A5937]
gi|282893138|ref|ZP_06301372.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
gi|295406755|ref|ZP_06816560.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
gi|297207646|ref|ZP_06924081.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245662|ref|ZP_06929527.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
gi|300911728|ref|ZP_07129171.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|418424820|ref|ZP_12997933.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|418427775|ref|ZP_13000780.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|418430620|ref|ZP_13003529.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433912|ref|ZP_13006353.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|418440156|ref|ZP_13011856.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|418449252|ref|ZP_13020636.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|418452062|ref|ZP_13023396.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|418455058|ref|ZP_13026317.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457936|ref|ZP_13029135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|424775017|ref|ZP_18202016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
gi|448740360|ref|ZP_21722339.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
gi|448743282|ref|ZP_21725192.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
gi|59798269|sp|Q6G8T5.1|RELA_STAAS RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59798429|sp|Q99TL8.2|RELA_STAAN RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59800175|sp|P0A0E9.1|RELA_STAAW RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59800176|sp|P0A0F0.1|RELA_STAAU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2580433|dbj|BAA23138.1| ppGpp hydrolase [Staphylococcus aureus]
gi|49244910|emb|CAG43371.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|253728871|gb|EES97600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257787679|gb|EEV26019.1| ppGpp hydrolase [Staphylococcus aureus A9781]
gi|257840144|gb|EEV64608.1| ppGpp hydrolase [Staphylococcus aureus A9763]
gi|257843916|gb|EEV68310.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
gi|257848251|gb|EEV72242.1| ppGpp hydrolase [Staphylococcus aureus A9299]
gi|257851076|gb|EEV75019.1| ppGpp hydrolase [Staphylococcus aureus A8115]
gi|257854452|gb|EEV77401.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
gi|257858069|gb|EEV80958.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
gi|257864340|gb|EEV87090.1| ppGpp hydrolase [Staphylococcus aureus A5937]
gi|282764456|gb|EFC04582.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
gi|294968502|gb|EFG44526.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
gi|296887663|gb|EFH26561.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177313|gb|EFH36565.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
gi|300885974|gb|EFK81176.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|387717760|gb|EIK05758.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387718063|gb|EIK06058.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|387719270|gb|EIK07221.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|387724807|gb|EIK12446.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|387729870|gb|EIK17283.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|387736462|gb|EIK23556.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|387744943|gb|EIK31707.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|387745111|gb|EIK31873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387746704|gb|EIK33433.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346875|gb|EJU81945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
gi|408423735|emb|CCJ11146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408425725|emb|CCJ13112.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408427712|emb|CCJ15075.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408429701|emb|CCJ26866.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408431688|emb|CCJ19003.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408433682|emb|CCJ20967.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408435674|emb|CCJ22934.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408437658|emb|CCJ24901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|445548844|gb|ELY17091.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
gi|445563411|gb|ELY19572.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|358464228|ref|ZP_09174194.1| GTP diphosphokinase [Streptococcus sp. oral taxon 058 str. F0407]
gi|357067256|gb|EHI77382.1| GTP diphosphokinase [Streptococcus sp. oral taxon 058 str. F0407]
Length = 738
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 310/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E+EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEQEFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVESV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|295094222|emb|CBK83313.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus sp. ART55/1]
Length = 814
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 308/541 (56%), Gaps = 65/541 (12%)
Query: 127 PERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L+++L I P+ ++ ++ +A +A AH GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 82 PEELYKELISRILTYHPSADITMIEKAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAEL 141
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD E+I AG+LHD VEDT V+T E I EF V +V+G V+KL +LK + V
Sbjct: 142 ELDKETIVAGILHDVVEDT-VMTSEEIAAEFSEEVAFLVDG---VTKLTQLKMTTDKIEV 197
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
Q A++LR+MFL+M +++RVI++KLADRLHN+RTL + P KQ A ET+ ++AP+A
Sbjct: 198 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPEKQIEKARETMDIYAPIAH 254
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED-DQFL 364
LG+ +IK EL++LS MY + Y +K ++ +++L E + + + + D + +
Sbjct: 255 RLGISKIKVELDDLSMMYLMPDVYKDLKAQI-------DEKLTERDAYIKRVVADVKKHI 307
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
D ++ EI K +SIYK + +++++ I +RI + + +
Sbjct: 308 DNAGLEAEIDGRVKHFFSIYKKMKNQNKTLDQIYDIFAVRIKV------------NTVRD 355
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 356 CYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIRT 407
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EM AE GIAAH+ + +TG V ++SWL I EW
Sbjct: 408 YEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILEW 449
Query: 540 QEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
Q + N FV T DL +V+ FTP G++KNLP G+T +D+AY IHT +GNKMV
Sbjct: 450 QRDTDDNKEFMSFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKMV 508
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
A++NG V L N + VEIIT S+++ + WL K+ AR KI ++ +
Sbjct: 509 GARINGRQVPIDTKLNNGDRVEIIT-----SQNSTGPSRDWLNIVKSTQARTKINQWFKH 563
Query: 660 Q 660
Q
Sbjct: 564 Q 564
>gi|258424059|ref|ZP_05686941.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
gi|257845680|gb|EEV69712.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 312/544 (57%), Gaps = 62/544 (11%)
Query: 122 FKEDS----PERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
KED P + +DL I PN +L+++ +A + + H+GQ RRSGEP+I HP+
Sbjct: 5 LKEDGLTNKPVKTVDDLLARIRVYYPNADLKIIEKAYSFSEKMHEGQIRRSGEPYISHPL 64
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL + LD ++IA GLLHDTVEDT T E I EFG + +V+G V+K+G++
Sbjct: 65 SVAAILADFHLDLDTIATGLLHDTVEDT-AATLEDIRREFGDVIAHLVDG---VTKIGQM 120
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
K KN + + +++R+M +AM ++VRV++VKLADRLHNMRTL+ MP KQ IA ET
Sbjct: 121 KFKNSHEK----QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALET 176
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
L+++ PLA +G+ +K ELE+L F Y + Y ++ +++ E + +EE ++ K
Sbjct: 177 LEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTEAEQNRYIEEVKHLIGK 236
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
++ F + E+ K +SIY+ + ++V + R++++
Sbjct: 237 ELTKAGF------RYEVYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE---- 286
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
CY LGLVH +W PIP KD+IA PK N YQSLHTT++ E R+E+Q
Sbjct: 287 --------CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGE---RIEIQ 335
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT EM L+AE+GIAAH+ + RGK +++ ++ + +WL +
Sbjct: 336 IRTSEMHLVAEKGIAAHWKYK----------------ERGK--MMDDGDLQ-QANWLRDL 376
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
W + EF+DT+ DL + ++VFTP G+++ P+GAT VD+A+ +HTE+GN
Sbjct: 377 VSWHQNV---RNPDEFLDTVKTDLFETEIYVFTPTGDVREFPEGATPVDFAFAVHTELGN 433
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
++V A+VNG +V + L N + VE++T SK+ K WL+ T A+ KI F
Sbjct: 434 RIVGARVNGKMVPLKYQLQNGDTVEVVT-----SKTQVP-SKDWLKFVVTNKAKSKIRAF 487
Query: 657 LREQ 660
++E+
Sbjct: 488 VKEE 491
>gi|449896310|ref|ZP_21789603.1| putative stringent response protein [Streptococcus mutans R221]
gi|449932704|ref|ZP_21802946.1| putative stringent response protein [Streptococcus mutans 3SN1]
gi|450046159|ref|ZP_21838781.1| putative stringent response protein [Streptococcus mutans N34]
gi|450180207|ref|ZP_21887099.1| putative stringent response protein [Streptococcus mutans 24]
gi|449161049|gb|EMB64267.1| putative stringent response protein [Streptococcus mutans 3SN1]
gi|449199191|gb|EMC00269.1| putative stringent response protein [Streptococcus mutans N34]
gi|449248487|gb|EMC46730.1| putative stringent response protein [Streptococcus mutans 24]
gi|449262493|gb|EMC59942.1| putative stringent response protein [Streptococcus mutans R221]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 310/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG ++ T L +V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMIPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|450010915|ref|ZP_21828877.1| putative stringent response protein [Streptococcus mutans A19]
gi|450023600|ref|ZP_21830715.1| putative stringent response protein [Streptococcus mutans U138]
gi|449189902|gb|EMB91522.1| putative stringent response protein [Streptococcus mutans A19]
gi|449193207|gb|EMB94598.1| putative stringent response protein [Streptococcus mutans U138]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 309/542 (57%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A E H GQ R+SGEP+IIHP++VA IL +L LD +++ G LHD
Sbjct: 19 YMNKADIAFVQKALDYATECHSGQFRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT T + +E +FG+ V+ IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VIEDTEA-TLDHLEAKFGSDVKNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ L E +E E ++ KI+ + + EI K
Sbjct: 191 AFRYLNEVEFYK----ISHLMNEKRREREALVDDIVDKIK--AYTAEQGLHGEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R I+ Q Y +LG +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIYDLIAIRCIL------------DTQSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +EVQIRT EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKANGYQSIHTT----VYGPKGPIEVQIRTHEMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V N+ AL ++W+ + E Q+ GN +FVD++ D
Sbjct: 349 IKGKV-----------------NSQESALGMNWIKELVELQDASNGNAV--DFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L V
Sbjct: 390 IFAERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGNV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + ++F + W+ KT AR+KI +F + Q + D + D+ +
Sbjct: 450 VEIIT-----NSNSFGPSRDWINIVKTNKARNKIRQFFKNQDKELSITKGRDLLVDYFQE 504
Query: 680 SG 681
G
Sbjct: 505 QG 506
>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
12261]
gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
12261]
Length = 734
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 336/578 (58%), Gaps = 61/578 (10%)
Query: 131 WEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W +L ++Y L+ EL+ + A ++A +AH QKR SG+P+++H + VA IL +++LD
Sbjct: 22 WHELWSKVTYYLTKEELKKLGEAFVMAADAHGEQKRSSGDPYVVHSINVASILADMQLDL 81
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
++ A LLHD +EDT ++ E+++ FG V +V+G V+KLGKL K S +D +
Sbjct: 82 VTLIAALLHDVLEDT-ALSAEKVKSAFGDDVITLVDG---VTKLGKLPFK----SFEDYQ 133
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MF+ M +++RV+++KLADRLHNMRTL + KQ IA ETL+++APLA LG+
Sbjct: 134 AENLRKMFVVMAKDIRVVLIKLADRLHNMRTLGALRRDKQLRIAKETLEIYAPLAHRLGI 193
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
YQ+K LE+L+F Y++ + Y +++RRV E E +++A +IL +++ + ++
Sbjct: 194 YQVKRGLEDLAFKYSDPDMYYEIRRRVRKKLPEREAIIKKAIEILQDRLKQE------SI 247
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
+++ K YSIY+ + + + + ++ + LR+++ CY VL
Sbjct: 248 HFKVKGRAKHFYSIYEKMNRKKLPVEQLYDLLALRVVVDDVAA------------CYTVL 295
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH IW PIP DYIA PK N YQSLHTT++ E LEVQIR+ EM+ +AE G
Sbjct: 296 GIVHTIWKPIPGQFDDYIANPKTNMYQSLHTTVVGPTGEP---LEVQIRSAEMNRLAEYG 352
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ R G V ++ R++W+ E E G T
Sbjct: 353 IAAHW-----------------RYKEGGNVL---DDLDARLTWIRQALEGDHE--GGPT- 389
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ + D+L S VFVFTP+G++ +LPKG+T +D+AY IHT++GN+ V A VN +VS
Sbjct: 390 -EFLERLKEDVLTSDVFVFTPQGKVVSLPKGSTPIDFAYAIHTQVGNRCVGAMVNNRIVS 448
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEIT 669
T+ + N ++V+IIT S + R WL+ A++ A+ KI F R+Q E
Sbjct: 449 LTYEVKNGDIVKIIT----SPQGTPSR--DWLKMARSSKAKGKIRSFFRQQEKAERQE-K 501
Query: 670 ADTVGDFVADSGEESEVEDLSDGSKQDKPLWEKILMNV 707
+ + + + ++EDLS + PL +I ++
Sbjct: 502 IERGHELLEREIKRRDIEDLSAEYEDLIPLLNRIARDI 539
>gi|309792557|ref|ZP_07687019.1| RelA/SpoT family protein [Oscillochloris trichoides DG-6]
gi|308225371|gb|EFO79137.1| RelA/SpoT family protein [Oscillochloris trichoides DG6]
Length = 809
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/521 (40%), Positives = 301/521 (57%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL + +L+RRA LA AH GQ R+SGE +I HPV VA IL EL LD ESIAA LLHD
Sbjct: 96 YLPGGDADLIRRAYALALIAHAGQYRQSGEAYIDHPVAVASILLELRLDAESIAAALLHD 155
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V + + +F + +V+G TK+S L EN + ++++A R++ +A
Sbjct: 156 VVEDTGV-QLDLVRNQFNGCIAHLVDGVTKLSGL-------ENKTKEELQAGSYRKLIIA 207
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
++ RVI++KLADRLHNMRTL PPHKQ +A ETL ++APLA LGM+Q+KSELE+L
Sbjct: 208 TADDPRVILIKLADRLHNMRTLGATPPHKQRRVARETLDIYAPLAHRLGMWQVKSELEDL 267
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F N + Y ++ + + + E+ ++ K L +E + + ++ K
Sbjct: 268 AFKAMNPDRYQEIAQGLTLRKEARERIIQRVIKRLNDALEKE------GISAQVSGRPKH 321
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPK-PCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + + + +R+II+ + P VG ICY VLG+VH +WTP
Sbjct: 322 IYSIWRKMDRKGLPLERIYDQLAVRVIIQERDPERAVG-------ICYRVLGVVHMLWTP 374
Query: 439 IPRAMKDYIATPKPNGYQSLHTT-LIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
+ DYIA PK + YQSLHTT LIP EVQIRTEEM IAE GIAAH+ +
Sbjct: 375 VLSEFDDYIAVPKESSYQSLHTTVLIP----GGTPCEVQIRTEEMHQIAEHGIAAHWRYK 430
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
T RG ++ N +I WL + W+ E +REFV++
Sbjct: 431 EGFT-------------RG-----SDQNYEAKIKWLRELISWRIELT---DAREFVESFK 469
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
+ L +V++FTP+G+I +LP+G+T VD+AY IH+E+GNK + AKVNG +V + L N
Sbjct: 470 TE-LEEQVYIFTPKGKIIDLPEGSTPVDFAYRIHSEVGNKCIGAKVNGRIVPLDYHLRNG 528
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
E+VE++T +K+ + WL KT SAR I +F R
Sbjct: 529 EIVEVMT-----TKTGRGPSRDWLGFVKTPSARDHIKRFFR 564
>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
Length = 753
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 214/545 (39%), Positives = 307/545 (56%), Gaps = 56/545 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E L+ RA ++ H+GQ+R SGEP+I HPV VA +L +L IAAG LHD VEDT
Sbjct: 36 EQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDT 95
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IE EFG VR++VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 96 DV-TPETIEAEFGLEVRQLVEGVTKLSKFN-FSTKTER------EAENFRRMFLAMAQDI 147
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+PP KQ IA ET VFAPLA LG+++ K ELE+L+F Y
Sbjct: 148 RVIVVKLADRLHNMRTLEHLPPVKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYL 207
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ Y ++++ VAD + E +E+A IL ++E + + EI K +SI
Sbjct: 208 EPDTYRRMQQLVADKRTDREDHIEQAITILHDRLE-----PICSKHLEISGRPKHLFSIS 262
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + + +E+ +A +R+I+K + CY L +VH + PIP K
Sbjct: 263 QKMERQQKEFHEIYDVAAVRVIVKTN------------EECYRALAVVHDCFRPIPGRFK 310
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PK N YQSLHT +I LEVQIRTE M IAE GIAAH+
Sbjct: 311 DYIGLPKSNRYQSLHTVVIGLGGRP---LEVQIRTEAMHHIAEYGIAAHWK--------- 358
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ + P GK + + +WL + EWQ + ++E++D + +L S
Sbjct: 359 --YKESSNQP-GKAAWSPDDE---KFTWLRQLLEWQSDL---KDAQEYLDNVKDNLFDSE 409
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G++ +L +GAT VD+AY IHTE+GN A+VNG +V+ L N ++VEI+T
Sbjct: 410 VYVFTPKGDLIDLTQGATPVDFAYRIHTEVGNHCFGARVNGRMVTLDTPLDNGDIVEIMT 469
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVADS 680
N+ WL A + +AR++I ++ RE+ L E+ +G D+
Sbjct: 470 QNSAHPSL------DWLNFAASNAARNRIRQWYKRSHREENILRGREMLEKALGKKGFDA 523
Query: 681 GEESE 685
+SE
Sbjct: 524 LLKSE 528
>gi|384864853|ref|YP_005750212.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|312830020|emb|CBX34862.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ECT-R 2]
Length = 729
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 738
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 310/544 (56%), Gaps = 62/544 (11%)
Query: 122 FKEDS----PERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
KED P + +DL I PN +L+++ +A + + H+GQ RRSGEP+I HP+
Sbjct: 5 LKEDGLTNKPVKTVDDLLARIRIYYPNADLKIIEKAYSFSEKMHEGQIRRSGEPYISHPL 64
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL + LD ++IA GLLHDTVEDT T E I EFG + +V+G V+K+G++
Sbjct: 65 SVAAILADFHLDLDTIATGLLHDTVEDT-AATLEDIRTEFGDVIAHLVDG---VTKIGQM 120
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
K KN + + +++R+M +AM ++VRV++VKLADRLHNMRTL+ MP KQ IA ET
Sbjct: 121 KFKNSHEK----QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALET 176
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
L+++ PLA +G+ +K ELE+L F Y + Y ++ +++ E + ++E ++ K
Sbjct: 177 LEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTESEQNRYIDEVKVLIGK 236
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
++ F + E+ K +SIY+ + ++V + R++++
Sbjct: 237 ELNKAGF------RYEVYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE---- 286
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
CY LGLVH +W PIP KD+IA PK N YQSLHTT++ E R+E+Q
Sbjct: 287 --------CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGE---RIEIQ 335
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT EM L+AE+GIAAH+ + RGK V ++ A +WL +
Sbjct: 336 IRTSEMHLVAEKGIAAHWKYK----------------ERGKMVDDSDLQQA---NWLRDL 376
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
W + EF+DT+ DL + ++VFTP G+++ P+GAT VD+A+ +HTE+GN
Sbjct: 377 VSWHQNV---RNPDEFLDTVKTDLFETEIYVFTPTGDVREFPEGATPVDFAFAVHTELGN 433
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
++V A+VNG +V + L N + VE++T SK+ K WL+ T A+ KI F
Sbjct: 434 RIVGARVNGKMVPLKYQLQNGDTVEVVT-----SKTQVP-SKDWLKFVVTNKAKSKIRAF 487
Query: 657 LREQ 660
++E+
Sbjct: 488 VKEE 491
>gi|104773939|ref|YP_618919.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103423020|emb|CAI97706.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 753
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 298/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++L V A A AH+GQ R SG+P+I+HP +VA IL L LD +++AAG LHD
Sbjct: 19 YITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ + NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ R N + K AL I RE E + + EF++ + D
Sbjct: 346 ------YKRGNFQGVDEKE------GGALDIG-----REILELQKDSSDADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 482
>gi|335029122|ref|ZP_08522634.1| GTP diphosphokinase [Streptococcus infantis SK1076]
gi|334269523|gb|EGL87940.1| GTP diphosphokinase [Streptococcus infantis SK1076]
Length = 738
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQQYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S ++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVEYK----SFEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E+ +T K I
Sbjct: 188 EDLSFRYLNPTEFYKISHMMKEKRQEREALVDE----VVTKLEEYSSERHLTGK--IYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVDT+
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDTV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT+IG K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKIGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|19746884|ref|NP_608020.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
gi|19749128|gb|AAL98519.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
Length = 739
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 311/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ELV++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 191 AFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P+
Sbjct: 245 IYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK-- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++ D
Sbjct: 347 ------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|270293217|ref|ZP_06199428.1| GTP diphosphokinase [Streptococcus sp. M143]
gi|270279196|gb|EFA25042.1| GTP diphosphokinase [Streptococcus sp. M143]
Length = 738
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E+EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEQEFGHEVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVESV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|418036575|ref|ZP_12674991.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354687625|gb|EHE87705.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 753
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 298/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++L V A A AH+GQ R SG+P+I+HP +VA IL L LD +++AAG LHD
Sbjct: 19 YITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ + NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ R N + K AL I RE E + + EF++ + D
Sbjct: 346 ------YKRGNFQGVDEKE------GGALDIG-----REILELQKDSSDADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 482
>gi|403252468|ref|ZP_10918778.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
gi|402812481|gb|EJX26960.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
Length = 733
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 299/523 (57%), Gaps = 57/523 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
+ E +L+ +A A H+GQKR SGEPFI HPVEV +IL L +D ++ A LLHD
Sbjct: 45 FTREEKKLLIKAYEFARIVHEGQKRFSGEPFITHPVEVTKILAGLGVDVTTLVAALLHDV 104
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VED V+ ++I++EFG V RIV+G TKVS + ++++ K + +++MF AM
Sbjct: 105 VEDGENVSLDQIKKEFGPEVARIVDGVTKVSNINAPIGRDQDSR---KKIETIQKMFFAM 161
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ K+ A ETL+++APLA LG+Y IKSELE+L
Sbjct: 162 AEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 221
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y K+K VA+ KE EK E +L +E+ + +K + K
Sbjct: 222 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 275
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + E+ + LR+I+K CY VLG+VH IW P+
Sbjct: 276 YYSIWRKMREKGKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 323
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHTT+I E LE+QIR EEM AE G+ AH+
Sbjct: 324 PGRFKDYIAAPKSNGYRSLHTTVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 375
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RP+ ++ + W+ + +W++E T EF D I ++
Sbjct: 376 ----IYKERPDVKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 413
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKG+T +D+AY IHTEIG+ AKVNG +V + L N +V
Sbjct: 414 LQMDEVFVFTPKGDILHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLKNGDV 473
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VEII S WL++AKT SAR KI +FL+E+ A
Sbjct: 474 VEIIVNKNSPGPSV-----DWLKYAKTHSARAKIRRFLKEKLA 511
>gi|401564457|ref|ZP_10805350.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
gi|400188859|gb|EJO22995.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
Length = 743
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 314/544 (57%), Gaps = 58/544 (10%)
Query: 117 VSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
+S DA + + + + + +R SY + +L+ +R+A A +AH GQ R SG+ +IIHP+
Sbjct: 1 MSDDAQRAVTLDMILDKVR---SYQADADLDKIRKAYAYAEQAHSGQVRISGDAYIIHPL 57
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL L LD E+I A LLHD VEDT T E +E EFG + +++G V+KLG++
Sbjct: 58 NVAYILTGLHLDDETICAALLHDVVEDT-CATLEEMEAEFGKNIMALIDG---VTKLGRI 113
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
E S +DV+ ++ R+MFLAM +++RVI++KLADRLHNMRTL +M K+ IA ET
Sbjct: 114 ----EYMSKEDVQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRHRIAKET 169
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
L+V+APLA LG+ IK ELE+L Y E Y + V KE ++ + E+ + + +
Sbjct: 170 LEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQEFIRESIEQIRE 229
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
K+E +K EI+ K YSIY+ + + S+NE+ ++ +R+++
Sbjct: 230 KLE------AAGIKAEIKGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLV--------- 274
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQ 476
S + CY VLG++H +W PIP KDYIA PK NGYQSLHTT++ Y LE+Q
Sbjct: 275 ---SSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGYP----LEIQ 327
Query: 477 IRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAI 536
IRT+ M ++E G+AAH+ + GRS G T + ++SWL +
Sbjct: 328 IRTKAMHQVSEFGVAAHWK-----------YKEAGRSI-GATDETDQ-----KMSWLRQM 370
Query: 537 REWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
Q+E+ +EF + + D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+
Sbjct: 371 VSLQKEY---DDPKEFFEALKLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGH 427
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
V AKVNG +V + L N ++V I+T A + S WL + + R KI +
Sbjct: 428 HCVGAKVNGKIVPLEYKLKNGDIVSIVTNKASNGPSP-----DWLNTVASSATRSKIRAW 482
Query: 657 LREQ 660
+++
Sbjct: 483 FKKE 486
>gi|226311469|ref|YP_002771363.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
gi|226094417|dbj|BAH42859.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
Length = 723
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 310/529 (58%), Gaps = 55/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ +YLS +++L+ RA LA +AH+GQ R+SG P+I+HP+ VA IL L +D +
Sbjct: 7 EIVKKASTYLSQTDMDLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVT 66
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAAG LHD VEDT + T + + E+FG V +V+G TK+ K+ K K K E A+
Sbjct: 67 IAAGFLHDVVEDTEI-TLDHLREQFGPDVALLVDGVTKLEKI-KYKSKEEQ------LAE 118
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M +AM +++RVI++KLADRLHNMRTL HM KQ I+ ETL++FAPLA LG+
Sbjct: 119 NHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAS 178
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
+K ELE+ + Y N + Y ++ + E E L EA+ + +K+ + + ++
Sbjct: 179 VKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIREKLGE------LNIEA 232
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSI+K + + NE+ + LRII+ + + CY VLG+
Sbjct: 233 EISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGI 280
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT+I E LEVQIRT +M AE GIA
Sbjct: 281 VHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWDMHQTAEIGIA 337
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK++ + A ++ L I E E N ++E
Sbjct: 338 AHWAYK-----------------EGKSIV--QGSFAEKLGSLREIIEGGSEEAPN--AQE 376
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ +DL VFVFTP+G++ LPKG+ +D++Y IH+ +GN+ + AKVNG +V
Sbjct: 377 FMESLKQDLFSDTVFVFTPKGDVVELPKGSVPLDFSYRIHSAVGNRTIGAKVNGKIVPLD 436
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ + ++VEI+T SK ++ + WL+ AK+ AR+KI ++ +++
Sbjct: 437 YAMKTGDIVEILT-----SKHSYGPSQDWLKMAKSAHARNKIKQWFKKE 480
>gi|418912249|ref|ZP_13466230.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
gi|377722506|gb|EHT46632.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
Length = 738
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
gi|225207469|gb|EEG89823.1| RelA/SpoT family protein [Coprococcus comes ATCC 27758]
Length = 774
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 318/540 (58%), Gaps = 59/540 (10%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+PE L++ L + P+ ++ ++ +A +A +AH GQ R+SGE +IIHP+ V IL +
Sbjct: 36 NPELLYKSLIERVRKYHPSADVSMIEKAYHIARDAHKGQTRKSGEEYIIHPLWVGIILAQ 95
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT V+T E I +EFG V +V+G V+KLG+L +
Sbjct: 96 LEMDKETIVAGILHDVVEDT-VMTDEEIRQEFGDEVALLVDG---VTKLGQLSYSADKLE 151
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 152 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMRPEKQLEKAKETMDIYAPIA 208
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
+ LG+ +IK+EL++L+ Y+ E + + +++ E E+ +++I D+
Sbjct: 209 QRLGISKIKTELDDLALKYSQPEVFNDLVKQINARKTEREE--------FVQQIVDEVST 260
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ + E+ K +SIYK ++ +++++ + +RII+
Sbjct: 261 HMKNANIDAEVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIV------------DSV 308
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY LG++H ++TP+P KDYIA PK N YQSLHTTL+ + + E+QIRT+EM
Sbjct: 309 KDCYAALGVIHEMYTPVPGRFKDYIAMPKANMYQSLHTTLMSSIGQP---FEIQIRTKEM 365
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
AE GIAAH+ + S GK A ++SWL I EWQ +
Sbjct: 366 HKTAEYGIAAHWKYK--------------ESEDGKKSV--EAKEEEKLSWLRQILEWQRD 409
Query: 543 FVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
N REF++ + DL V+ FTP G++KNLP G+T VD+AY IHT +GNKMV
Sbjct: 410 MSDN---REFLNLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHTAVGNKMVG 466
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++ +++
Sbjct: 467 ARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLSIVKSTQAKNKINQWFKKE 521
>gi|15924624|ref|NP_372158.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|156979952|ref|YP_001442211.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
gi|255006419|ref|ZP_05145020.2| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|14247406|dbj|BAB57796.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|156722087|dbj|BAF78504.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
Length = 729
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|228476468|ref|ZP_04061158.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
gi|228251889|gb|EEK10935.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
Length = 739
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/522 (37%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATDAHSGQSRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++F Y N ++ K ++ + KE +E EE ++ KI+ + + ++ K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 737
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 293/522 (56%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L L++RA + + AH+GQ R SGEP++ HP+ VA++L ++ LD ++AAGLLH
Sbjct: 29 SYIDNPDLALIQRAYVFSARAHEGQMRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLH 88
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DTVEDT+ T + I E FG V IV+G TK+S + + S KA+++R+M L
Sbjct: 89 DTVEDTDT-TIDEIVELFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMIL 140
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM E++RV++VKLADRLHNMRTL +KQ IA ETL +++PLA LG+Y +K +LE+
Sbjct: 141 AMAEDIRVLMVKLADRLHNMRTLDFQKSYKQQLIAQETLDIYSPLANRLGLYMVKRDLED 200
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y + Y + L ++H E +K+L + L ++ I K
Sbjct: 201 LCLYYLKPDVYNAI---TDGLERQHTLGKEYVDKVLALL---NDILKNNEIEGTIYGRTK 254
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
+SI+K + + +++EV+ I R+I+ + CY VLGLVH +W P
Sbjct: 255 HKFSIHKKMQRQGLNLDEVHDIIAFRVIV------------DSVKDCYSVLGLVHSMWKP 302
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
I KDYI+ PK N YQSLHTT+I E R+E+QIRTEEM +AE GIAAH+ +
Sbjct: 303 ISGRFKDYISIPKANMYQSLHTTVIGPEGE---RIEIQIRTEEMQQVAEYGIAAHWQYK- 358
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G +V N + A R SWL I +WQ E REF+ ++
Sbjct: 359 ---------------ETGTSVAKQNRD-AERFSWLRQIMDWQREL---EDPREFMASLRF 399
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP GEI LP GAT VD+AY IHTE+GN AKVNG LV T L N +
Sbjct: 400 DLFNEEVYVFTPAGEIIELPDGATPVDFAYSIHTEVGNHCTGAKVNGRLVPLTTTLKNGD 459
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+E+ T + + WL+ KT AR +I ++R +
Sbjct: 460 TIEVFT------DKKRKPSRDWLKFVKTAKARTRIKHYIRTE 495
>gi|419433921|ref|ZP_13974039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40183]
gi|379576922|gb|EHZ41846.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40183]
Length = 740
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
Length = 738
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 298/509 (58%), Gaps = 48/509 (9%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E+V++A A +AH QKR SGEP+IIHP+ VA IL EL +D +I AGLLHD +EDT
Sbjct: 17 DVEMVKKAYDFAEKAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+++ F A + +VEG TK++KLG+++ K + ++ +AD++R+M LAM +++
Sbjct: 77 EF-SYDETVSLFNAEIANLVEGVTKLTKLGEMEYKTK----EEQQADNVRKMLLAMAKDI 131
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL MP KQ + A ETL ++APLA LGM +IK ELE+L F Y
Sbjct: 132 RVIIIKLADRLHNMRTLKFMPAKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYL 191
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ +A+ E E + + L +K+ + ++++I K YSIY
Sbjct: 192 HEKEYYELVDSIAEKRVERETYINDIVNDLKQKLGNS------GIESDIDGRPKHFYSIY 245
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +R+ L + CY VLG+VH I+ PIP K
Sbjct: 246 KKMVSKNKSIEQIFDLTAIRV------------LVHSVKDCYGVLGIVHTIYRPIPGRFK 293
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ +
Sbjct: 294 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 343
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G + +G+ + ++ WL + EWQ+E + EF++ DL
Sbjct: 344 -----EGDNAKGEQD--KQKDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 393
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT++GNK V AKVNG +V + L E+VEI+T
Sbjct: 394 VFVFTPKGVVINLCSNATPIDFAYRIHTDVGNKCVGAKVNGKIVPLDYTLKTGEIVEILT 453
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKI 653
S +A + WL AK+ ++ KI
Sbjct: 454 -----SPNAKGPNMDWLNIAKSNQSKSKI 477
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 306/537 (56%), Gaps = 60/537 (11%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
ED+ ++L ++ IS + +++ +++A LA +AH GQKR +GEP+I HP+ VA IL
Sbjct: 59 EDAYKKLINRVKKYIS--NQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLSVAYILS 116
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
ELELD +I A LLHD EDT+ T E IE +FG + +V+G V+KL + K KN+
Sbjct: 117 ELELDRNAIVAALLHDVAEDTDT-TLEDIENQFGKEIAFLVDG---VTKLSQFKYKNK-- 170
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
+D + ++ ++MFLAM E+VRV+I+KLADRLHNMRTL K+ +A ET++++APL
Sbjct: 171 --EDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIYAPL 228
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+Y IK ELE+L F Y EDY + ++ + + E +E+ +L +KI
Sbjct: 229 AHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKI----- 283
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
D +K I K YSIYK + + ++++ + +R+I+ P
Sbjct: 284 -DETNIKAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ----------- 331
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY VLG+VH +W P+P+ KDYIA PKPN YQSLHTT+I + +E+QIRT EM
Sbjct: 332 -CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQP---VEIQIRTWEMH 387
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
++E GIAAH+ R G + N+ +I WL I EWQ+
Sbjct: 388 HVSEYGIAAHW-----------------RYKEGNSN--NSQKFDSKIGWLRRILEWQD-- 426
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+E ++ + D+ VFVFTP+G++ NLPKG+T +D+AY IHT++GN V AK+
Sbjct: 427 --TENPKELMNAVKLDVFSDEVFVFTPKGDVINLPKGSTSIDFAYRIHTDVGNHCVGAKI 484
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
N +V L N ++V I+T + + K ++ WL ++ KI + + +
Sbjct: 485 NNKIVPLETKLKNGDIVSIVT--SKTGKPSY----DWLNMVCATESKSKIRNWFKRE 535
>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/535 (39%), Positives = 301/535 (56%), Gaps = 59/535 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+++L+ RA A++ H+GQ R+SGEP+I HPV VA IL EL D IAAG LHD VEDT
Sbjct: 35 DVDLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDT 94
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IE+ FG V +VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 95 DV-TVEDIEQRFGQEVALLVEGVTKLSKF-NFSNKTEQ------QAENFRRMFLAMAKDI 146
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKL+DRLHNMRTL + P KQ IA ET ++FAPLA LG++++K ELE+LSF Y
Sbjct: 147 RVIVVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYL 206
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSI 383
+EDY K++ V++ + E +E K+L K+ LD M ++ E++ K Y I
Sbjct: 207 ESEDYRKIQNFVSEKRIDRETRIETVKKLLSKR------LDTMGIQVEELQGRPKHLYGI 260
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
Y + + +E+ +A LRII+K + CY L +VH ++ P+P
Sbjct: 261 YCKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRSLAVVHDLFKPMPGRF 308
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KDYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+ + TG
Sbjct: 309 KDYIGLPKPNLYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETGG 363
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
H + + + +WL + +WQ + +E+VD + +L
Sbjct: 364 SDHTQFSDEDE--------------KFTWLRQLLDWQNDL---KDDQEYVDNLKDNLFDD 406
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
V+VFTP G++ L +GAT VD+AY IHTE+GN+M A++NG L N ++VEII
Sbjct: 407 DVYVFTPNGDVIALARGATAVDFAYRIHTEVGNQMKGARINGRWSVLDQPLQNGDIVEII 466
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
T + WL T +AR++I ++ RE+ EI +G
Sbjct: 467 T------QKNCHPSLDWLNFVVTPTARNRIRQWFKRSRREENMARGREILEKELG 515
>gi|417850258|ref|ZP_12496169.1| GTP diphosphokinase [Streptococcus mitis SK1080]
gi|339452940|gb|EGP65558.1| GTP diphosphokinase [Streptococcus mitis SK1080]
Length = 740
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 303/538 (56%), Gaps = 61/538 (11%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ ++L I +PN ++E + +A E H+GQ R SGEP+ IHPV VA IL +L +D
Sbjct: 1 MLDELLSKIKSYNPNTDVEKITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I AGL+HD +EDT V TFE + FG + +V+G V+KL K+K + S Q+
Sbjct: 61 DATIIAGLMHDILEDTEV-TFEEMSGMFGEEIANLVDG---VTKLKKIKYQ----SKQES 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD+LR+M LAM ++RVII+K+ADRLHN+RTL +M KQ A ETL+++APLA LG
Sbjct: 113 QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLM 367
M +K ELE+LS Y E Y + RV +K+ E KI+ IE+ L
Sbjct: 173 MSNVKWELEDLSLRYLEPEIYYDLAERV-------KKKRSEREKIINDIIEEISISLKEH 225
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++ EI K YSIYK + K S +E+ + +RII+ P S CY
Sbjct: 226 NIQGEISGRPKSLYSIYKKMYKQNKSFDEIFDLTAIRIIV---------PTISD---CYA 273
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG+VH W PIP KDYIA PKPN YQSLH TLI S EVQIRT EM AE
Sbjct: 274 VLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLIS---TSGDVFEVQIRTFEMHRTAE 330
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + V ++ ++ +++WL + +WQ E
Sbjct: 331 YGIAAHWKYKAGV---------------DRSTSFDD-----KLTWLRQLMDWQREV---N 367
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
SREF+ + D + VFVF+P+G++ NL GAT +D+AY +HT +GN V AKV+G +
Sbjct: 368 DSREFITSFKEDFVSDEVFVFSPKGDVINLIAGATPIDFAYKVHTAVGNNCVGAKVDGRI 427
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK-FLREQAALS 664
V + L N +VEI+T N SS + K WL+ K+ AR KI + F +E AL+
Sbjct: 428 VPLNYKLKNGNIVEILT-NPNSSGPS----KDWLKIVKSSQARTKIKQWFKKENKALN 480
>gi|314991932|ref|ZP_07857387.1| GTP diphosphokinase [Enterococcus faecium TX0133B]
gi|313593516|gb|EFR72361.1| GTP diphosphokinase [Enterococcus faecium TX0133B]
Length = 737
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 303/523 (57%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ P + V +A A AHDGQ R+SGEP+IIHP++VA IL +L++D ++A G LH
Sbjct: 18 QYMGPEHVAFVEKACEYATAAHDGQFRKSGEPYIIHPIQVAGILADLKMDPHTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T E + EEFG V +V+G V+KLGK+K K+ + A++ R+M L
Sbjct: 78 DVVEDTEI-TLEDLREEFGDDVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+ KQ IA ETL+++APLA LG+ +IK ELE+
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF-LDLMTVKTEIRSVC 377
+ Y N + Y ++ + + + EE K + +ED + + + + EI
Sbjct: 190 TALRYLNPKQYYRIVHLM-------QTKREEREKYVSGTVEDIRIATEELGIFAEIYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + NE+ + +R+I+ + CY VLG +H W
Sbjct: 243 KHIYSIYRKMKDQKKQFNEIYDLLVIRVIV------------DSIKDCYAVLGAIHTKWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+I + +E+QIRT+EM IAE G+AAH++
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTVIG---PAGNPVEIQIRTQEMHEIAEFGVAAHWA-- 345
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G P+G + ++S + I E Q+E + + EF++ +
Sbjct: 346 -YKEGKNEKVEPDG--------------MTKQLSSFHEILELQDE---SYDASEFMEGVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VFTP+G++ LPKG+ +D+AY IHT+IGNK AKVNG +V + L N
Sbjct: 388 GDIFSDKVYVFTPKGDVTELPKGSGPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S ++F + WL+ T AR+KI +F + Q
Sbjct: 448 DIIEIMT-----SPNSFGPSRDWLKLVATSKARNKIKRFFKAQ 485
>gi|421451544|ref|ZP_15900905.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus salivarius K12]
gi|400181975|gb|EJO16237.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus salivarius K12]
Length = 739
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+S ++L+LV +A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 SYMSADDLKLVEKAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++F Y N ++ K ++ + KE +E EE ++ KI+ + + ++ K
Sbjct: 190 MAFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|418017021|ref|ZP_12656580.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
gi|345527714|gb|EGX31022.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
Length = 739
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N ++ K ++ + KE +E EE ++ KI+ + + ++ K
Sbjct: 190 MSFRYLNEVEFYK----ISHMMKEKRREREELVDEIVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ G+ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQDASNGDAMG--FVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
Length = 744
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 299/526 (56%), Gaps = 63/526 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+++L+ RA A++ H+GQ R+SGEP+I HPV VA IL EL D IAAG LHD VEDT
Sbjct: 35 DVDLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDT 94
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IE+ FG V +VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 95 DV-TVEDIEQRFGQEVALLVEGVTKLSKF-NFSNKTEQ------QAENFRRMFLAMAKDI 146
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKL+DRLHNMRTL + P KQ IA ET ++FAPLA LG++++K ELE+LSF Y
Sbjct: 147 RVIVVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYL 206
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSI 383
+EDY K++ V++ + E +E K+L K+ LD M ++ E++ K Y I
Sbjct: 207 ESEDYRKIQNFVSEKRIDRETRIETVKKLLSKR------LDTMGIQVEELQGRPKHLYGI 260
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
Y + + +E+ +A LRII+K + CY L +VH ++ P+P
Sbjct: 261 YCKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRSLAVVHDLFKPMPGRF 308
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KDYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+ + TG
Sbjct: 309 KDYIGLPKPNLYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETGG 363
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
H + + + +WL + +WQ + +E+VD + +L
Sbjct: 364 SDHTQFSDEDE--------------KFTWLRQLLDWQNDL---KDDQEYVDNLKDNLFDD 406
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
V+VFTP G++ L +GAT VD+AY IHTE+GN+M A++NG L N ++VEII
Sbjct: 407 DVYVFTPNGDVIALARGATAVDFAYRIHTEVGNQMKGARINGRWSVLDQPLQNGDIVEII 466
Query: 624 T----------YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
T N + + +A R +QW + RS R + M RE
Sbjct: 467 TQKNCHPSLDWLNFVVTPTARNRIRQWFK----RSRREENMARGRE 508
>gi|402301240|ref|ZP_10820621.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
gi|401723656|gb|EJS97105.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
Length = 728
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 311/529 (58%), Gaps = 58/529 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L YL ++ +++A + A +AH GQ R+SGEP+I+HP++VA I+ EL+LD ++A
Sbjct: 7 LEKASQYLGEKDVAFLQKAYLYAEKAHSGQYRKSGEPYILHPIQVAGIIIELQLDPNTVA 66
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
A LHD VEDT+V + E IEEEF V +V+G TK+ K + + +A++
Sbjct: 67 AAFLHDVVEDTDV-SIEDIEEEFNGQVAMLVDGVTKLKKFKYKSKEEQ-------QAENH 118
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM +++RVI++KLADRLHNMRTL +MPP KQ + ETL++FAPLA LG+ IK
Sbjct: 119 RKMLIAMAKDIRVIMIKLADRLHNMRTLKYMPPEKQRVTSNETLEIFAPLAHRLGISTIK 178
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+ + Y + + Y R+ +L K+ E EE +M++I+ D L + + EI
Sbjct: 179 WELEDTALRYLDPQQYY----RIVNLMKKKRAEREEYLSDVMERIDGD--LKDVFIGAEI 232
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI--CYHVLGL 431
K YSIY+ ++ NE+ + +RII+ Q I CY VLG+
Sbjct: 233 SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIV--------------QNIKDCYAVLGV 278
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H +W P+P KDYIA PK N YQSLHTT++ + LEVQIRTEEM +AE G+A
Sbjct: 279 IHTLWKPMPGRFKDYIAMPKANMYQSLHTTVVGPHGDP---LEVQIRTEEMHRVAEFGVA 335
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + ++SW + E Q + ++E
Sbjct: 336 AHWAYK-----------------EGKAVDPKSDTFEDKLSWFRDVIESQND---TNDAQE 375
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL VFVFTP+G++ LP+G+ +D+AY IH+EIGN+ + AKVNG +V+
Sbjct: 376 FMESLKMDLFSDMVFVFTPKGDVIELPRGSVPLDFAYRIHSEIGNRCIGAKVNGKMVTLD 435
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
H L ++V+++T SK ++ + W++ A++ AR+KI ++ +++
Sbjct: 436 HELKTGDIVDVMT-----SKHSYGPSQDWIKIAQSSHARNKIKQWFKKE 479
>gi|300812618|ref|ZP_07093031.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496399|gb|EFK31508.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 753
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 296/521 (56%), Gaps = 58/521 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG ++ + L+ RE E + + EF++ + D
Sbjct: 348 ---------------RGNFQGVDEKDGGA----LDIGREILELQKDSSDADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + + N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKMKNGDV 448
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T NA S+ W E KT A++KI ++ R+
Sbjct: 449 VDILTQGNARPSRD-------WAEMVKTSRAKNKIRRYFRD 482
>gi|148988688|ref|ZP_01820121.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
gi|147925889|gb|EDK76964.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
Length = 739
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|419777910|ref|ZP_14303812.1| GTP diphosphokinase [Streptococcus oralis SK10]
gi|383187663|gb|EIC80107.1| GTP diphosphokinase [Streptococcus oralis SK10]
Length = 738
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRRFFKNQ 484
>gi|262051284|ref|ZP_06023508.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
gi|259160921|gb|EEW45941.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
Length = 729
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 308/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYGSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|404371563|ref|ZP_10976867.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
gi|226912310|gb|EEH97511.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
Length = 730
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 306/515 (59%), Gaps = 54/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ ++V++A LA +AH QKR SGEP+I HP++VA IL E+ +D +I AGLLHD +EDT
Sbjct: 17 DTDIVKKAYDLACDAHKNQKRESGEPYITHPIDVAEILAEMGMDTSTIVAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ T++ I+ F V +V+G V+KLGK++ K + ++ +AD++R+M LAM +++
Sbjct: 77 HY-TYDDIKNIFNEEVADLVQG---VTKLGKIEYKTK----EEQQADNVRKMLLAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHN+RTL MP KQ A ETL ++APLA LG+ +IK ELE+L+F Y
Sbjct: 129 RVIIIKLADRLHNLRTLKFMPKEKQKQKAKETLDIYAPLAHRLGISKIKWELEDLAFRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ E+Y + +++A+ E E + E + L K+E+ + + ++I K YSIY
Sbjct: 189 HEEEYYDLVKQIAEKRVERETYIAEIIEDLHNKLEESE------IDSDIDGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +RI L + + CY VLG+VH I+ PIP K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNTVKDCYGVLGIVHTIYKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+ +
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGPQGKT---FEIQIRTFEMHKTAEYGIAAHWKYK------- 340
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G + K N +++WL + EWQ+E + EF++ DL
Sbjct: 341 -----EGDTQEDKEKSFEN-----KLAWLRDMLEWQKE---TSDAEEFIEGFKIDLFTDE 387
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+FVFTP+G + NLP GAT +D+AY IHT+IGN+ + +KVNG +V + L E+VE++T
Sbjct: 388 IFVFTPKGVVINLPSGATPIDFAYRIHTDIGNRCIGSKVNGKIVPLDYNLKTGEIVEVLT 447
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
N +A + WL AK+ A+ KI ++ ++
Sbjct: 448 SN-----NAKGPNMDWLNMAKSNQAKSKIRQWFKK 477
>gi|417837430|ref|ZP_12483668.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
gi|338760973|gb|EGP12242.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
Length = 749
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 298/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A L Q LD + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYMIH+E+G V A++NG +V + L ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W+ KT AR+KI +F + +
Sbjct: 452 VEMLT------QASARPSRDWVNLVKTSRARNKIKRFFKTE 486
>gi|257870870|ref|ZP_05650523.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|357051393|ref|ZP_09112586.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
gi|257805034|gb|EEV33856.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|355379902|gb|EHG27051.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
Length = 736
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 302/521 (57%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S + V++AL A EAH Q R+SGEP+IIHP++VA IL EL++D ++A G LHD
Sbjct: 19 YMSEEHVAFVQKALDYATEAHKDQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T ++E FGA V +V+G V+KLGK+K K+ + A++ R+M +A
Sbjct: 79 VVEDTEV-TLADLKEVFGADVAMLVDG---VTKLGKIKYKSHEEQL----AENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNMRTL H+ KQ IA ET++++APLA LG+ +IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E E + E + + E+ LD+ EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMQTKREEREAYVSETVEQIRLATEE---LDIF---AEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + NE+ + +R+I+ + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQKKQFNEIYDLLAIRVIV------------DSIKDCYAVLGTIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I +E+QIRT EM IAE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIG---PKGNPVEIQIRTHEMHEIAEFGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G+T + + ++ W I E Q+E + + EF++ + D
Sbjct: 348 ---------------EGRTEKVKADKMTQQVGWFREILELQDE---SYDASEFMEGVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+G++ LP+G++ +D+AY IHT+IGNK AKVNG +V + L N ++
Sbjct: 390 IFSDKVYVFTPKGDVTELPQGSSPLDFAYSIHTDIGNKTTGAKVNGKMVQLDYKLKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T S ++F + W++ T A++KI +F + Q
Sbjct: 450 IEILT-----SPNSFGPSRDWIKLVATSKAKNKIKRFFKAQ 485
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 207/547 (37%), Positives = 313/547 (57%), Gaps = 74/547 (13%)
Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ED+ + PN +L+L+RRA +L+ + H GQ R+SGEP+++HP+ VA IL E+ LD
Sbjct: 4 FEDIAEKVERYHPNADLDLLRRAYLLSAQMHKGQVRKSGEPYLMHPLAVAYILAEMRLDV 63
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+ GLLHD VEDT+V T E +E++FG + +V+G TK+S + E S +D +
Sbjct: 64 ICVTTGLLHDVVEDTHV-TLEELEQQFGPEIAHLVDGLTKISNI-------EYTSREDRQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+ +R+M LAM +++RV++VKLADRLHNMRTL ++PP K+++ A ETL ++AP+A LGM
Sbjct: 116 AETVRKMLLAMVDDIRVVLVKLADRLHNMRTLDYLPPEKRAAKAQETLDIYAPIAHRLGM 175
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
+I+ ELE+LSF Y +DY +K + E +L L +K+ + V
Sbjct: 176 GKIRGELEDLSFQYLYPDDYQHLKSILDQRRPALEADLAHVRATLQEKLPEH------NV 229
Query: 370 K-TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI--CY 426
K EI+ K YS+Y+ + + SI++V + +R+I Q I CY
Sbjct: 230 KVVEIQGRIKRLYSLYRKLKERAISIDQVYDLMAVRVIT--------------QDIADCY 275
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEE 481
+G+VH IW PIP KD+I P+ N YQSLHT+++ PF EVQIRT E
Sbjct: 276 AAVGVVHNIWKPIPGRFKDWIGIPRNNLYQSLHTSVVGDIGHPF--------EVQIRTAE 327
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M IAE GIAAH+ R G++ + +WL + EWQ+
Sbjct: 328 MHKIAEEGIAAHW-----------------RYKEGRSAVKEDPET---YAWLKRLVEWQQ 367
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
E SREF+D + +L + V+ +TP+G++ LP+G+ +D+AY IH+++G V A
Sbjct: 368 EV---SDSREFLDELKINLYPNEVYAYTPKGKVLELPRGSCPIDFAYAIHSDVGQHCVGA 424
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
KVNGN+V ++ L N +VVEI+T + ++ WL+ KT AR+KI ++L E
Sbjct: 425 KVNGNIVKLSYELKNGDVVEILT------SPNGKPNRDWLKLVKTARARNKIRRYLVETE 478
Query: 662 ALSASEI 668
+ EI
Sbjct: 479 RQRSLEI 485
>gi|418076861|ref|ZP_12714094.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47502]
gi|353747001|gb|EHD27659.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47502]
Length = 740
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|427392523|ref|ZP_18886528.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
gi|425731484|gb|EKU94302.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
Length = 736
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 306/523 (58%), Gaps = 54/523 (10%)
Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
++Y++ + + V+RA +A EAH GQ R+S E +I HPV+VA IL E+++D ++A G L
Sbjct: 17 LTYMTSDHVAFVKRAYDVAEEAHRGQMRKSQEEYITHPVQVAAILAEIKMDPVTVATGFL 76
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD +EDT + +++ I E F V +V+G VSKLGK K K S ++ +A++ R+M
Sbjct: 77 HDVIEDT-LYSYDDIAEMFNPKVADLVDG---VSKLGKFKFK----SKEEHQAENHRKML 128
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
LAM ++VRV++VKLADRLHNMRTL + P KQ IA ETL+++APLA LG+ +IK ELE
Sbjct: 129 LAMAKDVRVVLVKLADRLHNMRTLKYHRPEKQREIARETLEIYAPLADRLGISRIKWELE 188
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
+ + Y N + Y ++ + ++ E+ +E A +++ + ++D + ++ I
Sbjct: 189 DTALRYINPQQYYRIVHLMKSRREDRERYIENAQELIQESVDD------LDIEANITGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + E+ + +R+I+ P CY VLG +H W
Sbjct: 243 KHIYSIYRKMKNQKKQFGEIYDLLAIRVIV---------PSIKD---CYAVLGAIHTRWK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT+ L LEVQIRT++M +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAMPKANMYQSLHTTV---LGPDATPLEVQIRTQQMHEVAEYGVAAHWAYK 347
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GKT + + ++SW I E Q E + + +F+D+I
Sbjct: 348 -----------------EGKTQKVKEDSDNKQLSWFRDIIELQTE---SNNASDFMDSIK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D+ +V+VF+P+G++ LPK ++ +D+AY +HTE+GNK AKVNG +V + L N
Sbjct: 388 EDIFQDKVYVFSPKGDVMELPKNSSTLDFAYHVHTEVGNKSTGAKVNGKIVPLNYKLKNG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VE++T S ++F + WL + T AR++I +F + Q
Sbjct: 448 DIVEMLT-----SSNSFGPSRDWLNYVNTSKARNRIKRFFKTQ 485
>gi|15901481|ref|NP_346085.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
gi|149011496|ref|ZP_01832743.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
gi|182684588|ref|YP_001836335.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
gi|303255968|ref|ZP_07341996.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
gi|387759759|ref|YP_006066737.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
gi|419515152|ref|ZP_14054777.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae England14-9]
gi|419523854|ref|ZP_14063429.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
gi|421247913|ref|ZP_15704392.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
gi|421268804|ref|ZP_15719673.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR95]
gi|14973135|gb|AAK75725.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
gi|147764486|gb|EDK71417.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
gi|182629922|gb|ACB90870.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
gi|301802348|emb|CBW35102.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
gi|302597027|gb|EFL64145.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
gi|379556262|gb|EHZ21317.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
gi|379635701|gb|EIA00260.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae England14-9]
gi|395612929|gb|EJG72962.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
gi|395869058|gb|EJG80174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR95]
Length = 740
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|312874138|ref|ZP_07734172.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
gi|311090208|gb|EFQ48618.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
Length = 750
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V +A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I++EFG V IVEG TK+ K+ +E + AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E+ + A L ++D + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M IAE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V V +P K +I I E Q+E S EF++++ D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+ YMIH+E+G V AKVN +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +S+ + W++ KT SAR+KI +F + +
Sbjct: 452 VEMLT------QSSATPSRDWIKLVKTSSARNKIKRFFKSE 486
>gi|417916440|ref|ZP_12560019.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
gi|342829647|gb|EGU63996.1| GTP diphosphokinase [Streptococcus mitis bv. 2 str. SK95]
Length = 738
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTEA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL+H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLNHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I++ Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCILE------------THSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFV+++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVESV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|325912633|ref|ZP_08175016.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
gi|325478054|gb|EGC81183.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
Length = 750
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V +A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I++EFG V IVEG TK+ K+ +E + AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E+ + A L ++D + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M IAE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V V +P K +I I E Q+E S EF++++ D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+ YMIH+E+G V AKVN +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +S+ + W++ KT SAR+KI +F + +
Sbjct: 452 VEMLT------QSSATPSRDWIKLVKTSSARNKIKRFFKSE 486
>gi|295106146|emb|CBL03689.1| (p)ppGpp synthetase, RelA/SpoT family [Gordonibacter pamelaeae
7-10-1-b]
Length = 802
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 215/534 (40%), Positives = 302/534 (56%), Gaps = 57/534 (10%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
E ER E R T +YLS + L+ +A A EAH+GQ R+SGEPF+ HPVEVA IL
Sbjct: 55 ETPEERFAELQRLTSAYLSEPDQALLAKAFQFASEAHEGQCRKSGEPFVAHPVEVAIILA 114
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+L +D E++ A LLHDTVEDT VT E++ EF V ++VEG TK++++ E
Sbjct: 115 DLRMDVETLCAALLHDTVEDT-CVTTEQVAVEFNEQVAQLVEGVTKITRI-------EVE 166
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S+ D +A +R+MF+AM++++RVI++KLADRLHNMRTL + ++ A ETL+++AP+
Sbjct: 167 SLSDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLGALREDRRIFKARETLEIYAPI 226
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ IK ELE+LSF Y Y +V R V + E E L++ IL ++E
Sbjct: 227 AHRLGINNIKWELEDLSFYYLEPNKYKQVSRMVTESRAEREGYLDQIIGILHDEMEK--- 283
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ + +I K YSIY+ + + +E+ + +RII+ +
Sbjct: 284 ---VGITAQIMGRPKHLYSIYQKMTQKGKGFSEIYDLIAVRIIV------------PSVK 328
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LG VH +W P+P KDYIA PK N YQSLHTT+I + LEVQIRTE+M
Sbjct: 329 DCYLALGAVHTLWHPMPGRFKDYIAMPKYNMYQSLHTTVIG---PAGRPLEVQIRTEDMH 385
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+E G+AAH+ + G+S I +++WL + +WQ+E
Sbjct: 386 RQSEYGVAAHWR----------YKEKGGKS---------GDAIDQQLAWLRQMVDWQDE- 425
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
SREF+ + DL S VFVFTP+GE +L G+T VD+AY IHTE+GN V AKV
Sbjct: 426 --TQDSREFLKDLKVDLAPSEVFVFTPKGEAMSLRAGSTPVDFAYAIHTEVGNHCVGAKV 483
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
NG +V T+ L + VEI+T + S + WL KT SAR KI +
Sbjct: 484 NGAIVPLTYELQLGDRVEILTQKSASPS------RDWLNLVKTPSARSKIRSYF 531
>gi|339445999|ref|YP_004712003.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
gi|338905751|dbj|BAK45602.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
Length = 791
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 214/547 (39%), Positives = 311/547 (56%), Gaps = 62/547 (11%)
Query: 116 SVSSDAFKEDSP-----ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEP 170
S +SDA K S ER E R T +YLS ++ L+ +A A +AH GQ R+SGEP
Sbjct: 36 SFASDADKNTSSSQTPEERFAELQRLTSAYLSESDQALLEKAFRFASDAHAGQCRKSGEP 95
Query: 171 FIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKV 230
F+ HPVEVA IL +L +D E++ A LLHDTVEDT+V T E +E EF + ++VEG TK+
Sbjct: 96 FVAHPVEVAIILADLRMDVETLVASLLHDTVEDTSV-TREDVEREFSPEIAQLVEGVTKI 154
Query: 231 SKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS 290
+++ E S+ D +A +R+M +AM++++RVI++KLADRLHNMRTL + ++
Sbjct: 155 TRI-------EVESLSDEQAATIRKMLVAMSKDIRVIVIKLADRLHNMRTLGALREDRRI 207
Query: 291 SIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 350
+ ETL+++AP+A LG+ IK ELE+LSF Y + +V R V + E E L++
Sbjct: 208 FKSRETLEIYAPIAHRLGINNIKWELEDLSFFYLEPNKFKQVSRMVTESRAEREGYLDQI 267
Query: 351 NKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPK 410
+IL ++E + ++ +I K YSIY+ + K +E+ + +RII+K
Sbjct: 268 IEILHGEMEK------VGIQAQIMGRPKHLYSIYQKMTKKGKGFSEIYDLIAVRIIVK-- 319
Query: 411 PCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESM 470
+ CY LG VH +W P+P KDYIA PK N YQSLHTT+I +
Sbjct: 320 ----------SVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIG---PAG 366
Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
LEVQIRTE+M +E G+AAH+ R + +G + ++
Sbjct: 367 RPLEVQIRTEDMHRTSEYGVAAHW-------------RYKEKGGKG------GDELDQQL 407
Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMI 590
+WL + +WQ E SREF+ + DL + V+VFTP+GE+ +L G+T VD+AY I
Sbjct: 408 AWLRQMIDWQSE---TQDSREFLKDLKVDLAPTEVYVFTPKGEVMSLRAGSTPVDFAYAI 464
Query: 591 HTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSAR 650
HTE+GN V AKVNG +V T+ L + V+I+T + S + WL KT SAR
Sbjct: 465 HTEVGNHCVGAKVNGAIVPLTYELQLGDRVDILTQKSASPS------RDWLNLVKTPSAR 518
Query: 651 HKIMKFL 657
KI +
Sbjct: 519 SKIRSYF 525
>gi|325912114|ref|ZP_08174512.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
gi|325476064|gb|EGC79232.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
Length = 750
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V +A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I++EFG V IVEG TK+ K+ +E + AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E+ + A L ++D + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M IAE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V V +P K +I I E Q+E S EF++++ D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+ YMIH+E+G V AKVN +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +S+ + W++ KT SAR+KI +F + +
Sbjct: 452 VEMLT------QSSATPSRDWIKLVKTSSARNKIKRFFKSE 486
>gi|42519264|ref|NP_965194.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|385825782|ref|YP_005862124.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
gi|41583552|gb|AAS09160.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|329667226|gb|AEB93174.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
Length = 749
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 298/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A L Q LD + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTL------KQTLDSLGIKYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYMIH+E+G V A++NG +V + L ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W+ KT AR+KI +F + +
Sbjct: 452 VEMLT------QASARPSRDWVNLVKTSRARNKIKRFFKTE 486
>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
Length = 722
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/519 (38%), Positives = 309/519 (59%), Gaps = 66/519 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E++++A +A +AH+GQ R SG+P+I+HPVEVA IL E+ LD ++I A LLHD VEDT
Sbjct: 17 DIEMIKKAYNVAEKAHEGQLRESGDPYILHPVEVAIILVEMGLDTDAICAALLHDVVEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++ ++E ++ EF ++ +V+G V+KLGK++ K S ++ +A+++R++ +AM +++
Sbjct: 77 HL-SYEDVKREFNESIADLVDG---VTKLGKIEYK----SKEEQQAENIRKVLIAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL ++PP KQ + A ETL ++APLA LG+ +IK ELE+LS Y
Sbjct: 129 RVILIKLADRLHNMRTLKYLPPEKQKAKAEETLDIYAPLAHRLGISKIKWELEDLSLRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ +V E EKE+ E IL +K+E +K +I K YSIY
Sbjct: 189 HPDEYYELVSKVQKKRAEREKEINEIKNILQEKLEQ------AGIKADIDGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + +++ + +R+I+ + CY LG+VH +W PIP K
Sbjct: 243 RKMHYKNKTFDQIFDLLAVRVIV------------DTVKDCYAALGIVHTLWKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
DYIA PKPN YQSLH+T+I PF E+QIRT EM AE GIAAH+ +
Sbjct: 291 DYIAMPKPNMYQSLHSTVIGPNGQPF--------EIQIRTWEMHRTAEYGIAAHWKYKEG 342
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ +I ++ WL I E Q+E + EF++T+ D
Sbjct: 343 INN-------------------KELDIDEKLHWLRQILELQKE---AKDATEFMETVKID 380
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G + +LP +T +D+AY IHT++GNK V AKVNG +V + L ++
Sbjct: 381 LFSDEVFVFTPKGAVIDLPVDSTPIDFAYRIHTDVGNKCVGAKVNGRMVPLDYKLKTGDI 440
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
VEIIT S ++ + WL AK+ A++KI ++ +
Sbjct: 441 VEIIT-----SANSKGPSRDWLNIAKSSQAKNKIRQWFK 474
>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
Length = 732
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 310/538 (57%), Gaps = 60/538 (11%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
KE++ RL E ++ SY E +R+A LA EAH QKR +G+P+I+HP+ VA IL
Sbjct: 6 KEEAYNRLIEIIK---SYQPDETCENIRKAYELADEAHKEQKRVNGDPYILHPLAVAEIL 62
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
++E+D +I A LLHD VEDT + E IE FG V +V+G TK+++L +
Sbjct: 63 ADMEIDTTTITASLLHDVVEDTEYM-LEDIERIFGKEVAFLVDGVTKLNRL-------DY 114
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+ +D + + +R+MFLAM +++RV+++KLADRLHNMRTL +M KQ IA ETL+++AP
Sbjct: 115 RTKEDQQVNSMRKMFLAMAKDIRVVVIKLADRLHNMRTLKYMRSEKQKRIAQETLEIYAP 174
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG++ IK ELE+LSF Y + Y + ++ + K E+ + EA +L K + +
Sbjct: 175 LAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRKVREEIVNEAIDVLKKTLTES- 233
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
++ EI K YSIYK + K ++++ + +R+I+
Sbjct: 234 -----SISFEINGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVIV------------DTV 276
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
Q CY VLG+VH +W P+P KDYIA PKPN YQSLHTT+I + +E+QIRT +M
Sbjct: 277 QDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWDM 333
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
IAE G+AAH+ + GR+ + T ++ WL + EWQ+
Sbjct: 334 HHIAEYGVAAHWRYK------------EGRASQKAT------GFDEKMGWLRNMLEWQD- 374
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
+EFV+ + D VFVFTPRG++ +LP+GA +D+AY IHT++G++ V AK
Sbjct: 375 ---TSNPQEFVNALKLDAFSDEVFVFTPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAK 431
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG +V + L N ++VE+IT + + K + WL+ + +R KI + +++
Sbjct: 432 VNGKIVPLDYALKNGDIVEVIT--SKTGKPSL----DWLKIVGSSESRSKIRNWFKKE 483
>gi|322377400|ref|ZP_08051891.1| GTP pyrophosphokinase [Streptococcus sp. M334]
gi|417846678|ref|ZP_12492671.1| GTP diphosphokinase [Streptococcus mitis SK1073]
gi|321281600|gb|EFX58609.1| GTP pyrophosphokinase [Streptococcus sp. M334]
gi|339458311|gb|EGP70854.1| GTP diphosphokinase [Streptococcus mitis SK1073]
Length = 740
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|322374778|ref|ZP_08049292.1| GTP diphosphokinase [Streptococcus sp. C300]
gi|321280278|gb|EFX57317.1| GTP diphosphokinase [Streptococcus sp. C300]
Length = 738
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|401684009|ref|ZP_10815892.1| GTP diphosphokinase [Streptococcus sp. BS35b]
gi|418974870|ref|ZP_13522779.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
gi|419783424|ref|ZP_14309212.1| GTP diphosphokinase [Streptococcus oralis SK610]
gi|383182308|gb|EIC74866.1| GTP diphosphokinase [Streptococcus oralis SK610]
gi|383348241|gb|EID26200.1| RelA/SpoT family protein [Streptococcus oralis SK1074]
gi|400186314|gb|EJO20526.1| GTP diphosphokinase [Streptococcus sp. BS35b]
Length = 738
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYATERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|224368342|ref|YP_002602505.1| RelA protein [Desulfobacterium autotrophicum HRM2]
gi|223691058|gb|ACN14341.1| RelA [Desulfobacterium autotrophicum HRM2]
Length = 716
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 301/528 (57%), Gaps = 60/528 (11%)
Query: 133 DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
D+ I+ +P +L+++ RA + + H GQ R SGEP++ HP+EVA IL +++LD ES
Sbjct: 6 DILDKIAEYNPGADLDVIDRAYVYSARVHSGQMRLSGEPYLSHPLEVAAILADMKLDVES 65
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
IAA LLHD +EDT+ T + I E FG + IV G TK+SKL K +A+
Sbjct: 66 IAAALLHDVIEDTHA-TEQEILEMFGPGILHIVAGVTKISKL-TFSTKAAQ------QAE 117
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLLGMY 310
LR+M LAM +++RV+++KLADR+HNMRTL H KQ SIA ETL ++AP+A LG++
Sbjct: 118 SLRKMILAMADDIRVVLIKLADRIHNMRTLKFHKSQEKQRSIAQETLDIYAPIAARLGIF 177
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LSF+YT+ E+YA + V +E E + + + +K+ + ++
Sbjct: 178 WIKQELEDLSFLYTHPEEYASIDLLVNKAKEERESYIATVMERVKEKLANSN------IE 231
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
+++ K+ YSIY ++ E+ I RII+ CY V+G
Sbjct: 232 ADVKGRYKQHYSIYHKMVTQNLEFEELYDIVAFRIIV------------DTVSRCYEVMG 279
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
L+H +W PI +KDYI PKPN YQSLHTT+I + R+E+QIRT EMD IAE GI
Sbjct: 280 LIHSMWKPISGKIKDYIGVPKPNMYQSLHTTVIGPRGD---RVELQIRTREMDKIAESGI 336
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+S + G G G + +W+ + E QE F
Sbjct: 337 AAHWS---YKQG-GGFDEKTGEA----------------FAWIRNLVENQENF---SDPD 373
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF++ + DL +++FTP GEIK LPKGAT VD+AY+IHTE+G++ A+VNG LV+
Sbjct: 374 EFLENVRIDLYSDEIYIFTPHGEIKTLPKGATPVDFAYLIHTEVGDQCTGARVNGKLVTL 433
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
TH L + +EI+T S SA WL KT A+ KI +++R
Sbjct: 434 THGLITGDTIEIVTTKG-SHPSA-----DWLNFVKTVKAKTKIRQWVR 475
>gi|422824966|ref|ZP_16873151.1| GTP diphosphokinase [Streptococcus sanguinis SK405]
gi|422827233|ref|ZP_16875412.1| GTP diphosphokinase [Streptococcus sanguinis SK678]
gi|422857077|ref|ZP_16903731.1| GTP diphosphokinase [Streptococcus sanguinis SK1]
gi|422864569|ref|ZP_16911194.1| GTP diphosphokinase [Streptococcus sanguinis SK1058]
gi|324992246|gb|EGC24168.1| GTP diphosphokinase [Streptococcus sanguinis SK405]
gi|324994337|gb|EGC26251.1| GTP diphosphokinase [Streptococcus sanguinis SK678]
gi|327459563|gb|EGF05909.1| GTP diphosphokinase [Streptococcus sanguinis SK1]
gi|327490763|gb|EGF22544.1| GTP diphosphokinase [Streptococcus sanguinis SK1058]
Length = 739
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 307/527 (58%), Gaps = 55/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L T YL+ ++ +++AL+ A + H GQ RRSGEP+I+HP++VA IL +L+LD ++A
Sbjct: 13 LALTRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILAKLKLDAVTVA 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
G LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++
Sbjct: 73 CGFLHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K
Sbjct: 125 RKMLMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+LSF Y N ++ K+ + + +E E +EE +++KIE + + +I
Sbjct: 185 WELEDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + + +E+ + +R I+ Q Y +LG +H
Sbjct: 239 YGRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH
Sbjct: 287 ELWRPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V ++ A+ ++W+ + E Q++ + +++FV
Sbjct: 343 WAYKKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 443 LRTGDQVEIIT-----NANSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
5501]
Length = 734
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 313/543 (57%), Gaps = 59/543 (10%)
Query: 132 EDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
EDL I SY++ +LEL+ +A A +AH+GQ R SGEPF+ HP+ VA I+ ELELD
Sbjct: 17 EDLIEKIESYINDPDLELITKAYKFAKDAHEGQYRVSGEPFVEHPLGVALIMAELELDII 76
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SI LLHD VEDT V +F ++ EFG + +V G TK+SK+ K + E +A
Sbjct: 77 SITGALLHDVVEDTEV-SFAQLRNEFGEEITLLVNGVTKLSKIA-FKSREEQ------QA 128
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+ LR+MFLAM++++RVI++KL+DRLHNMRTL ++ KQ IA ET++++APLA LG+
Sbjct: 129 ESLRKMFLAMSKDIRVILIKLSDRLHNMRTLEYLSQQKQERIARETIEIYAPLAHRLGIS 188
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+K ELE+LSF + Y ++ +V+ E E+ ++ + K+E + L+L +
Sbjct: 189 TLKWELEDLSFKHLEPNKYYELSNKVSKNRDEREEYIDRC----ISKVE--KRLNLEGID 242
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
I K YSIY+ + + ++E+ + LR+I+ + Q CY VLG
Sbjct: 243 AHIYGRPKHLYSIYQKMKRKNKELSEIYDLVALRVIV------------NDVQECYQVLG 290
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H IW PIP +KDYIA PK N YQSLHTT+I E LE+QIRT +M AE G+
Sbjct: 291 NIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTVIGPKGEP---LEIQIRTWDMHRTAEYGV 347
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+ R K NN A +ISWL + EWQ++ +
Sbjct: 348 AAHW--------------------RYKEGKKNNEKAAKKISWLRQLLEWQKDL---QDAT 384
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF++T+ DL VFVFTP+G++ +LP+ AT VD+AY IHTE+G+ V AKVN LV
Sbjct: 385 EFMETLKVDLFEDEVFVFTPQGDVISLPRDATPVDFAYNIHTEVGHSCVGAKVNDKLVPL 444
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITA 670
+ L N ++VEI+T S S R WL KT A+ KI ++ ++Q A +
Sbjct: 445 EYKLENGDIVEILT----SKNSGPSR--DWLNFIKTSRAKSKIKRWFKQQRRDEAIDKGK 498
Query: 671 DTV 673
D++
Sbjct: 499 DSL 501
>gi|15903530|ref|NP_359080.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
gi|116516708|ref|YP_816914.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
gi|148994885|ref|ZP_01823906.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
gi|168488644|ref|ZP_02712843.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae SP195]
gi|225857262|ref|YP_002738773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae P1031]
gi|387626842|ref|YP_006063018.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
gi|417679609|ref|ZP_12329005.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17570]
gi|418087321|ref|ZP_12724490.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47033]
gi|418126295|ref|ZP_12763201.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44511]
gi|418130789|ref|ZP_12767672.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07643]
gi|418146887|ref|ZP_12783665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13637]
gi|418167244|ref|ZP_12803899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17971]
gi|418187624|ref|ZP_12824147.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47360]
gi|418192081|ref|ZP_12828583.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47388]
gi|418202856|ref|ZP_12839285.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52306]
gi|418214838|ref|ZP_12841572.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54644]
gi|418230417|ref|ZP_12857016.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP01]
gi|418234842|ref|ZP_12861418.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08780]
gi|419443000|ref|ZP_13983027.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13224]
gi|419455996|ref|ZP_13995953.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP04]
gi|419478281|ref|ZP_14018105.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18068]
gi|419484873|ref|ZP_14024648.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43257]
gi|419493772|ref|ZP_14033497.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47210]
gi|421218270|ref|ZP_15675164.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
gi|421220732|ref|ZP_15677571.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
gi|421222984|ref|ZP_15679766.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
gi|421227823|ref|ZP_15684525.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
gi|421236736|ref|ZP_15693333.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
gi|421243571|ref|ZP_15700084.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
gi|421266635|ref|ZP_15717515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR27]
gi|421271053|ref|ZP_15721907.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR48]
gi|421279420|ref|ZP_15730226.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17301]
gi|421285880|ref|ZP_15736656.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
gi|421294842|ref|ZP_15745563.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
gi|421301499|ref|ZP_15752169.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
gi|444382813|ref|ZP_21181012.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
gi|444385762|ref|ZP_21183833.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
gi|444409163|ref|ZP_21205761.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
gi|444412787|ref|ZP_21209106.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
gi|444414527|ref|ZP_21210784.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
gi|444422019|ref|ZP_21217684.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
gi|15459146|gb|AAL00291.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
gi|116077284|gb|ABJ55004.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
gi|147926953|gb|EDK77998.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
gi|183572878|gb|EDT93406.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae SP195]
gi|225725767|gb|ACO21619.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae P1031]
gi|301794628|emb|CBW37078.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
gi|332072474|gb|EGI82957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17570]
gi|353758337|gb|EHD38929.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47033]
gi|353796235|gb|EHD76580.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44511]
gi|353802113|gb|EHD82413.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07643]
gi|353812462|gb|EHD92697.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13637]
gi|353829236|gb|EHE09370.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17971]
gi|353849609|gb|EHE29614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47360]
gi|353855167|gb|EHE35137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47388]
gi|353867413|gb|EHE47308.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52306]
gi|353869568|gb|EHE49449.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54644]
gi|353885298|gb|EHE65087.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP01]
gi|353886464|gb|EHE66246.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08780]
gi|379551700|gb|EHZ16794.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13224]
gi|379565717|gb|EHZ30709.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18068]
gi|379581626|gb|EHZ46510.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43257]
gi|379592345|gb|EHZ57161.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47210]
gi|379627972|gb|EHZ92578.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP04]
gi|395583039|gb|EJG43488.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
gi|395586642|gb|EJG47009.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
gi|395586964|gb|EJG47326.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
gi|395594107|gb|EJG54347.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
gi|395601499|gb|EJG61646.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
gi|395606576|gb|EJG66680.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
gi|395866703|gb|EJG77831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR27]
gi|395867267|gb|EJG78391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR48]
gi|395878913|gb|EJG89975.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17301]
gi|395885867|gb|EJG96888.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
gi|395893411|gb|EJH04398.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
gi|395899059|gb|EJH10003.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
gi|444249440|gb|ELU55931.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
gi|444251182|gb|ELU57654.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
gi|444274026|gb|ELU79681.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
gi|444280088|gb|ELU85464.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
gi|444281669|gb|ELU86977.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
gi|444288643|gb|ELU93534.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
Length = 740
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|421299106|ref|ZP_15749793.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60080]
gi|395900577|gb|EJH11515.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60080]
Length = 740
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ KV + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKVTHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|73662434|ref|YP_301215.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418575969|ref|ZP_13140116.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|72494949|dbj|BAE18270.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379325717|gb|EHY92848.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 729
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 306/524 (58%), Gaps = 58/524 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + E V ++ +A+EAH+GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSKEDYEFVLKSYHIAYEAHEGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++ F + IVEG TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTPY-TFDDVKGMFNEEIAVIVEGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ YT++ Y R+ +L K+ E EE + + +I+ D L M + +I K
Sbjct: 190 TALRYTDSVQYF----RIVNLMKKKRSEREEYIQNAINQIQSD--LTSMNIVGDINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY VLGLVH +W P
Sbjct: 244 HIYSIYRKMVKQKKQFDQIFDLLAIRIIV------------NSINDCYAVLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS--REFVDTI 556
GK V + N +++W+ + E N TS EF++T+
Sbjct: 348 ----------------EGKKVTEKSQNFNNKLNWIKELAE-----TNNTTSDAEEFMETL 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL +V+ FTP ++ LP GA +D+AY +H+E+GNKM+ +KVNG + +VL
Sbjct: 387 KFDLQSDKVYAFTPESDVIELPYGAVPIDFAYAVHSEVGNKMIGSKVNGKIEPIDYVLQT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 447 GDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKSKIRSFFKKQ 485
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 300/515 (58%), Gaps = 53/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E++++A A +AH QKR SGEP+IIHP++VA IL EL +D +IAAGLLHD +EDT
Sbjct: 17 DVEMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDT 76
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
++E ++ F + +V G V+KLGK++ K + ++ +AD++R+M LAM +++
Sbjct: 77 -TCSYESMKTIFNEEIANLVNG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDI 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVII+KLADRLHNMRTL M KQ A ETL ++APLA LGM +IK ELE+LSF Y
Sbjct: 129 RVIIIKLADRLHNMRTLKFMTKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ ++Y ++ ++A+ E E + E L +K LD + ++I K YSIY
Sbjct: 189 HEDEYYQLVEQIAEKRVERETYINEVVCYLKEK------LDESGIDSDIEGRPKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++ SI ++ + +RI L + + CY VLG+VH I+ PIP K
Sbjct: 243 KKMINKNKSIEQIFDLTAIRI------------LVNSVKDCYGVLGIVHTIYKPIPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PKPN YQSLHTT+I ++ E+QIRT EM AE GIAAH+
Sbjct: 291 DYIAMPKPNMYQSLHTTVIGNQGKT---FEIQIRTFEMHKTAEYGIAAHWK--------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ ++ K + ++ WL + EWQ+E + EF++ DL
Sbjct: 339 --YKEGDKNEEDKA-----KDFEKKLVWLRDMLEWQKE---TSDAEEFIEGFKIDLFSDE 388
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G + NL AT +D+AY IHT+IGNK V AKVNG +V + L E+VEI+T
Sbjct: 389 VFVFTPKGVVINLCAKATPIDFAYRIHTDIGNKCVGAKVNGRIVPLDYTLKTGEIVEILT 448
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
S ++ + WL AK+ ++ KI ++ ++
Sbjct: 449 -----SSNSKGPNMDWLNIAKSNQSKSKIKQWFKK 478
>gi|405760481|ref|YP_006701077.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
gi|404277370|emb|CCM07883.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
Length = 740
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|357237402|ref|ZP_09124743.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
gi|356753592|gb|EHI70695.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
Length = 739
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/525 (37%), Positives = 308/525 (58%), Gaps = 56/525 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T +YL+ ++ V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G
Sbjct: 16 TANYLNEKDVAFVKKALDYATAAHFYQIRKSGEPYIVHPIQVAAILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT++ T E IE +FG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTDI-TLENIEADFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRS 375
E+L+F Y N ++ K+ +++ +E E +E+ KI E F D +
Sbjct: 188 EDLAFRYLNEAEFYKISHMMSEKRREREALVEDIVTKIKTYTTEQGLFGD-------VYG 240
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
K YSIY+ + + +++ + +R +++ Q Y ++G +H +
Sbjct: 241 RPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHEL 288
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
W P+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++
Sbjct: 289 WRPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWA 344
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
+ + RGK +N A + ++W+ + E Q+ N + +FVD+
Sbjct: 345 YK--------------KGVRGK---VNQAEQKMSMNWIKELVELQD--ASNGDAVDFVDS 385
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 VKEDIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLK 445
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VVEI+T + ++F + W++ KT R+KI +F + Q
Sbjct: 446 TGDVVEIVT-----NPNSFGPSRDWIKLVKTNKVRNKIRQFFKNQ 485
>gi|429727583|ref|ZP_19262348.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
gi|429151973|gb|EKX94811.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
Length = 739
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y + + V RA LA +AHDGQ R+SGEP+IIHP+ VA IL +++LD ++I G+LH
Sbjct: 15 TYAPHADFDKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILH 74
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + IEE FG V +V+G V+KLGK++ + S ++++LR+MFL
Sbjct: 75 DVVEDTEYEESD-IEEMFGKDVAVLVDG---VTKLGKIQYMTKEES----QSENLRKMFL 126
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M +K A ETL ++A +A LG+ IK ELE+
Sbjct: 127 AMAKDMRVILIKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELED 186
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS + + E Y + ++V K ++E AN + M K + Q M + +++ K
Sbjct: 187 LSLRFLDPEGYYSLVKKVNK--KREQRECYIANIVDMLKGKFQQ----MEIPSDVYGRPK 240
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + K S +E+ + +RII+ + CY VLG+VH +W P
Sbjct: 241 HFYSIYRKMKKKNKSFDEIYDLTAVRIIV------------DTVKDCYGVLGVVHTLWKP 288
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I E +E+QIRT+EM +AE G AAH+ +
Sbjct: 289 MPGRFKDYIAMPKPNMYQSLHTTVIGADGEP---VEIQIRTKEMHQVAEYGFAAHWKYKE 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
VT K V + + ++ W + EW+++ EF+D +
Sbjct: 346 GVT--------------DKDV----SALDEKLQWFRMMMEWEKDV---KDPHEFLDALKD 384
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+L +V+VFTP+GE+ LP G+T +D+AY IH+++GN V AKVNG +V H+L N +
Sbjct: 385 DVLTYQVYVFTPQGEVIELPTGSTTIDFAYRIHSKVGNSCVGAKVNGRIVPLDHILKNGD 444
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI L S+S+ + WL KT +AR++I +F +++
Sbjct: 445 IVEI-----LRSQSSLGPSRDWLNIVKTSNARNRIRQFFKKE 481
>gi|418895396|ref|ZP_13449491.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377695202|gb|EHT19566.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
Length = 729
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T +K ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----NKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|259500575|ref|ZP_05743477.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|302191266|ref|ZP_07267520.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus iners AB-1]
gi|329920168|ref|ZP_08276999.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
gi|259167959|gb|EEW52454.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|328936622|gb|EGG33066.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
Length = 750
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V +A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I++EFG V IVEG TK+ K+ +E + AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E+ + A L ++D + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M IAE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V V +P K +I I E Q+E S EF++++ D
Sbjct: 352 VQTAV------AETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+ YMIH+E+G V AKVN +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +S+ + W++ KT SAR+KI +F + +
Sbjct: 452 VEMLT------QSSATPSRDWIKLVKTSSARNKIKRFFKSE 486
>gi|421234533|ref|ZP_15691151.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
gi|395600387|gb|EJG60544.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
Length = 740
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DAQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|418149006|ref|ZP_12785768.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13856]
gi|419530670|ref|ZP_14070197.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
gi|353811342|gb|EHD91584.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13856]
gi|379573578|gb|EHZ38533.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
Length = 736
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 12 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 71
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 72 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 124 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 184 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 238 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 285
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 286 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 341
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 342 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 381
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 382 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 441
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 442 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 480
>gi|339640594|ref|ZP_08662038.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
gi|339453863|gb|EGP66478.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
Length = 738
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 312/524 (59%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD ++A G
Sbjct: 16 TRKYLSAEDVAFVQKALIYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG+ VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGSDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE +++KIE + + EI
Sbjct: 188 EDLSFRYLNEIEFYKISHTMKEKRREREALVEE----VVRKIE--TYAGERHLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I++ +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W++ + E Q E + ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIHEMMELQAE---SGDAQEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G ++ LPK + +D+AY IHT++G + AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT NA ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-NA----NSFGPSRDWIGLVKTSKARNKIRQFFKNQ 484
>gi|168493546|ref|ZP_02717689.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC3059-06]
gi|418074466|ref|ZP_12711719.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11184]
gi|418079068|ref|ZP_12716290.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4027-06]
gi|418081265|ref|ZP_12718475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6735-05]
gi|418089998|ref|ZP_12727152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43265]
gi|418098963|ref|ZP_12736060.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6901-05]
gi|418105743|ref|ZP_12742799.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44500]
gi|418115159|ref|ZP_12752145.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5787-06]
gi|418117317|ref|ZP_12754286.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6963-05]
gi|418134712|ref|ZP_12771569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11426]
gi|418174032|ref|ZP_12810644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41277]
gi|418217085|ref|ZP_12843765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae Netherlands15B-37]
gi|419432019|ref|ZP_13972152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP05]
gi|419440826|ref|ZP_13980871.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40410]
gi|419464927|ref|ZP_14004818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04175]
gi|419469444|ref|ZP_14009312.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA06083]
gi|419498009|ref|ZP_14037716.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47522]
gi|419535100|ref|ZP_14074599.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
gi|421281631|ref|ZP_15732428.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA04672]
gi|421310045|ref|ZP_15760670.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA62681]
gi|183576480|gb|EDT97008.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC3059-06]
gi|353746595|gb|EHD27255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4027-06]
gi|353748535|gb|EHD29187.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11184]
gi|353752004|gb|EHD32635.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6735-05]
gi|353761189|gb|EHD41761.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43265]
gi|353768945|gb|EHD49467.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6901-05]
gi|353775919|gb|EHD56398.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44500]
gi|353785243|gb|EHD65662.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5787-06]
gi|353787998|gb|EHD68396.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6963-05]
gi|353837988|gb|EHE18069.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41277]
gi|353870358|gb|EHE50231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae Netherlands15B-37]
gi|353901949|gb|EHE77479.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11426]
gi|379536527|gb|EHZ01713.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04175]
gi|379544248|gb|EHZ09393.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA06083]
gi|379563261|gb|EHZ28265.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
gi|379577896|gb|EHZ42813.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40410]
gi|379598842|gb|EHZ63627.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47522]
gi|379629100|gb|EHZ93701.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP05]
gi|395880896|gb|EJG91947.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA04672]
gi|395909660|gb|EJH20535.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA62681]
Length = 740
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALIYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|325294217|ref|YP_004280731.1| (p)ppGpp synthetase I SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064665|gb|ADY72672.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 716
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 311/551 (56%), Gaps = 66/551 (11%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
EL+ +A A E H+GQ R+SGEPF HP EVA IL EL +D +I +GLLHD VEDT+
Sbjct: 21 ELIIKAYNFAKERHEGQFRKSGEPFFSHPAEVAYILAELRMDTPTIISGLLHDVVEDTDT 80
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E IE+EFG V IV+G TK+ + S ++ A+ R + +++ E++RV
Sbjct: 81 -TIEEIEKEFGKEVAFIVKGVTKLEGY-------QFSSKEERDAESFRNLLISLAEDIRV 132
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
+IVKLADRLHNMRT+ M P Q A ETL ++APLA LGMY+IK+ELE+LS Y +
Sbjct: 133 LIVKLADRLHNMRTMESMKPESQKRNAKETLTIYAPLANRLGMYRIKNELEDLSLKYLDP 192
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
E Y +++++V + ++ LEE K + +K++++ +K +I+ K Y IY+
Sbjct: 193 ETYNELEKKVREKKRKILPYLEEIIKTVREKLKEN------GLKGDIQWRVKHIYGIYRK 246
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ EV +A +R+I VG CY +LG++H IW P+P +KDY
Sbjct: 247 MVTKGIPFEEVYDVAGIRVI-----TDTVGA-------CYQILGIIHSIWIPVPGRIKDY 294
Query: 447 IATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
IATPKPN YQSLHTT++ P + F +E QIRT EM +AE GIAAH+ + L
Sbjct: 295 IATPKPNMYQSLHTTVVGP---KGQF-IEFQIRTYEMHQVAEMGIAAHWKYKEGGGALTE 350
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
+ R WL + EW +E +EF++T+ DL +
Sbjct: 351 TEKE-------------------RFIWLRNLLEWVKE---EKNPQEFIETVRNDLYSEDI 388
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
+VFTP+G++K LP G+T VD+AY IHT IG++ AAKVNG LV H+L + + VEIIT
Sbjct: 389 YVFTPKGDLKTLPVGSTPVDFAYAIHTSIGHRCKAAKVNGKLVPLNHILQSGDKVEIITS 448
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFV-------A 678
N + + WL KT A++ I F+R++ A ++ V V
Sbjct: 449 NEE------RPSRDWLNFVKTSKAKNAIKNFIRKEENERARKLGESLVDKMVRKFSEKSL 502
Query: 679 DSGEESEVEDL 689
+S +E E+ED+
Sbjct: 503 NSIKEEEIEDI 513
>gi|315038166|ref|YP_004031734.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325956617|ref|YP_004292029.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|385817505|ref|YP_005853895.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
gi|312276299|gb|ADQ58939.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325333182|gb|ADZ07090.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|327183443|gb|AEA31890.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
Length = 746
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 298/522 (57%), Gaps = 57/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V +A A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDKQVAFVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + ++E+FG V IV+G TK++K E S Q+ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDELKEKFGEDVAFIVDGVTKLNKY-------EYKSHQEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y ++ + + EK + + K L K LD + +K EI K
Sbjct: 191 SFHYLNPEAYYRIVNLMDVKRSQREKYIADTIKTLKKT------LDELGIKYEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFDEIYDLLAVRVIVK------------NVRDCYAVLGAVHTEWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAMPKVNGYQSLHTTIIG---PGGRPLEIQIRTEAMHQVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
RG + + ++ + I E ++E + EF+ ++ D
Sbjct: 348 ---------------RGNFNGVEATSSGEKLDMVREILELKDE---TKDAGEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDRVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGSHAVGAKVNNKLVPLDYKLRNGDV 449
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+EI+T NA S+ W + KT AR+KI ++ R Q
Sbjct: 450 IEIMTQTNATPSRD-------WADMVKTSRARNKIRRYFRGQ 484
>gi|422344010|ref|ZP_16424937.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
gi|355377758|gb|EHG24967.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
Length = 743
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 304/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY + +LE +++A A +AH GQ R SG+ +I+HP+ VA IL L LD E+I A LLH
Sbjct: 20 SYQADADLEKIKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETICAALLH 79
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+ T E +E EFG + +++G V+KLG++ E S +DVK ++ R+MFL
Sbjct: 80 DVVEDTHA-TLEEMEAEFGRNIMALIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M K+ IA ET++V+APLA LG+ IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELED 191
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y E Y + V +E ++ + ++ + + +K+E +K EI+ K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQEFILDSIQKIHEKLE------AADIKAEIKGRAK 245
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S+NE+ ++ +RI L S + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRI------------LVSSVKDCYGVLGVIHAMWKP 293
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK NGYQSLHTT++ Y LE+QIRTE M I+E G+AAH+ +
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTEAMHRISEFGVAAHWKYK- 348
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+++ + + N ++SWL + Q+E+ +EF + +
Sbjct: 349 ---------------EAGRSIGVTDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V I+T A + S WL + + R KI + +++
Sbjct: 450 IVSIVTNKASNGPSP-----DWLNTVASSATRGKIRAWFKKE 486
>gi|303258573|ref|ZP_07344553.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
gi|303262660|ref|ZP_07348600.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
gi|303263601|ref|ZP_07349523.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
gi|303266361|ref|ZP_07352250.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
gi|303268234|ref|ZP_07354032.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
gi|418139970|ref|ZP_12776795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13338]
gi|418181000|ref|ZP_12817569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41688]
gi|418189879|ref|ZP_12826391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47373]
gi|421296479|ref|ZP_15747188.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
gi|302636216|gb|EFL66711.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
gi|302640074|gb|EFL70529.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
gi|302642185|gb|EFL72534.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
gi|302644061|gb|EFL74319.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
gi|302646639|gb|EFL76864.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
gi|353843072|gb|EHE23117.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41688]
gi|353853606|gb|EHE33587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47373]
gi|353904749|gb|EHE80199.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13338]
gi|395895352|gb|EJH06327.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
Length = 740
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/533 (39%), Positives = 308/533 (57%), Gaps = 57/533 (10%)
Query: 126 SPE-RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE R E +R +YL ++ L+ +A A AH GQKR+SGEPFI HPVEVA IL +
Sbjct: 45 SPEMRFKELVRLAGAYLPEEDMLLLEKAYRFAESAHKGQKRKSGEPFIAHPVEVALILAD 104
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L +D +++ A LLHDTVEDT+V T + + + F +V +VEG TK++++ E S
Sbjct: 105 LRMDVDTLCAALLHDTVEDTDV-THKDLLDTFNESVANLVEGVTKITQV-------EVES 156
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ D +A +R+MF+AM+ ++RVI++KLADRLHNMRTLS + ++ A ETL+++AP+A
Sbjct: 157 LTDEQAATIRKMFVAMSHDIRVIVIKLADRLHNMRTLSALREDRRIFKAHETLEIYAPIA 216
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ IK ELE+LSF Y + + ++ + VA+ + E L + L + D
Sbjct: 217 HRLGIGSIKWELEDLSFYYLDPARFKQIAQMVAESRAQREAYLSRVIETLRDDVND---- 272
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ +K I K YSI + ++ +E+ + +RII++ +
Sbjct: 273 --LNIKAHIAGRPKHLYSINQKMINREKGFSEIYDLIAVRIIVE------------SVKD 318
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG VH +W P+P KDYIA PK NGYQSLHTT+I + LEVQIRTEEM
Sbjct: 319 CYSVLGSVHSLWHPMPGRFKDYIAMPKANGYQSLHTTVIG---PAGRPLEVQIRTEEMHR 375
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
++E G+AAH+ + + N ++ +A +I+WL + +WQ+E
Sbjct: 376 LSEYGVAAHWRYK---------EKGNSKA---------DAAFDKQIAWLRQMVDWQDE-- 415
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
SREF+ + DL S VFVFTP GE+ +L G+T +D+AY +HTE+GN V AKVN
Sbjct: 416 -TQDSREFLSELKVDLAPSEVFVFTPAGEVMSLRAGSTPIDFAYAVHTEVGNHCVGAKVN 474
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
G++V ++ L + VEI+T + S + WL+ T SAR KI +L
Sbjct: 475 GDIVPLSYQLKMGDRVEILTQKSASPS------RDWLKIVATASARSKIRNYL 521
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 297/521 (57%), Gaps = 56/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ +LE V +A + A EAH GQ R+SGE +I HPV VA IL EL++D ++ + +LHD
Sbjct: 34 YLNKEDLEQVEKAYLFAAEAHRGQTRKSGEEYIHHPVAVAGILAELQMDATTLISAILHD 93
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E +E EFG TV +IV+G TK+ + K K E+ +A++ R+MF+A
Sbjct: 94 VVEDTGA-TLETVEAEFGETVAQIVDGLTKLKQRMKYKSTAEH------QAENHRKMFVA 146
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL ++P K+ IA ETL++FAPLA LG+ IK ELE+
Sbjct: 147 MAQDIRVILIKLADRLHNMRTLKYLPEAKRRRIAKETLEIFAPLAHRLGISTIKWELEDS 206
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S N + Y ++ + E EK L+E + +++E M + +I K
Sbjct: 207 SLRNLNPQQYYRIVNLMKQKRAEREKYLDEVIATIRERLEG------MNLSADISGRPKH 260
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++K NE+ + +R+I+ + CY VLG++H IW P+
Sbjct: 261 IYSIYRKMVKDHKQFNEIYDLLAVRVIV------------DSIRDCYAVLGIIHTIWKPM 308
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I E +EVQIRT EM IAE GIAAH+
Sbjct: 309 PGRFKDYIAMPKANMYQSLHTTVIGPKGEP---IEVQIRTREMHRIAEYGIAAHW----- 360
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
A G G + ++ + I E Q+E +REFV+ + D
Sbjct: 361 -------AYKEGAQIEG--------SFNEKLKFFREILEMQQE---THDAREFVENLKVD 402
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
VFVFTP+G++ LP G+ +D+AY IHTE+GN+ + AKVN +V H L ++
Sbjct: 403 WFSDSVFVFTPKGDVLELPSGSVPLDFAYRIHTEVGNRCIGAKVNNKIVPLDHRLKTGDI 462
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK ++ + WL+ K+ AR+KI + +++
Sbjct: 463 VEILT-----SKHSYGPSRDWLKLVKSSQARNKIRNWFKKE 498
>gi|289423171|ref|ZP_06424986.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
gi|289156502|gb|EFD05152.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
Length = 739
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y + + V RA LA +AHDGQ R+SGEP+IIHP+ VA IL +++LD ++I G+LH
Sbjct: 15 TYAPHADFDKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILH 74
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + IEE FG V +V+G V+KLGK++ + S ++++LR+MFL
Sbjct: 75 DVVEDTEYEESD-IEEMFGKDVAVLVDG---VTKLGKIQYMTKEES----QSENLRKMFL 126
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M +K A ETL ++A +A LG+ IK ELE+
Sbjct: 127 AMAKDMRVILIKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELED 186
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS + + E Y + ++V K ++E AN + M K + Q M + +++ K
Sbjct: 187 LSLRFLDPEGYYSLVKKVNK--KREQRECYIANIVDMLKGKFQQ----MEIPSDVYGRPK 240
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + K S +E+ + +RII+ + CY VLG+VH +W P
Sbjct: 241 HFYSIYRKMKKKNKSFDEIYDLTAVRIIV------------DTVKDCYGVLGVVHTLWKP 288
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I E +E+QIRT+EM +AE G AAH+ +
Sbjct: 289 MPGRFKDYIAMPKPNMYQSLHTTVIGADGEP---VEIQIRTKEMHQVAEYGFAAHWKYKE 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
VT K V + + ++ W + EW+++ EF+D +
Sbjct: 346 GVT--------------DKDV----SALDEKLQWFRMMMEWEKDV---KDPHEFLDALKD 384
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+L +V+VFTP+GE+ LP G+T +D+AY IH+++GN V AKVNG +V H+L N +
Sbjct: 385 DVLTYQVYVFTPQGEVIELPTGSTTIDFAYRIHSKVGNSCVGAKVNGRIVPLDHILKNGD 444
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI L S+S+ + WL KT +AR++I +F +++
Sbjct: 445 IVEI-----LRSQSSLGPSRDWLNIVKTSNARNRIRQFFKKE 481
>gi|227890126|ref|ZP_04007931.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
gi|227849301|gb|EEJ59387.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
Length = 749
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 298/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A L Q LD + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTL------KQTLDSLGIKYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNEI---KDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYMIH+E+G V A++NG +V + L ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSGPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W+ KT AR+KI +F + +
Sbjct: 452 VEMLT------QASARPSRDWVNLVKTSRARNKIKRFFKAE 486
>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 734
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 304/522 (58%), Gaps = 73/522 (13%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A +A +AH QKR SGEP+IIHP EVA IL ++E+D +I A LLHD +EDT V
Sbjct: 21 LIEKAFRVAEQAHQEQKRISGEPYIIHPCEVALILADIEMDTPTICAALLHDVIEDTPV- 79
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
++ I +EFG + +V+G TK++++ + S +D +A++LR+MF+AM ++RVI
Sbjct: 80 SYLDILKEFGEEIALLVDGVTKLTRI-------DFKSREDAQAENLRRMFIAMARDIRVI 132
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
I+KLADRLHNMRTLS+ KQ IA ET+++FAPLA LG+++ K ELE+L+F Y E
Sbjct: 133 IIKLADRLHNMRTLSYHAEAKQKVIARETMEIFAPLAHRLGIFRFKWELEDLAFYYMEPE 192
Query: 328 DYAKVKRRVADLYKEHE---KELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
Y +V +R+ +E E +L E K+ + +I+ D +I+ K +SIY
Sbjct: 193 MYYEVAKRLKQKRRERENYVNDLVEQIKVGLHQIDID---------ADIKGRPKNIFSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K ++K ++E+ +R++++ + CY VLG++H +W P+P K
Sbjct: 244 KKMIKQGKDVDEIYDKIAIRVLVE------------DVRDCYGVLGIIHTMWKPLPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
DYIATPK N YQSLHTTLI PF EVQIRT EM AE GIAAH+ +
Sbjct: 292 DYIATPKANMYQSLHTTLIGRGGEPF--------EVQIRTAEMHRTAEYGIAAHWRYK-- 341
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G +PR + ++SWL I EWQ+E + EF++++ D
Sbjct: 342 ----------EGYNPRER-------KFDEKLSWLRQILEWQQEV---KDTSEFMESLKID 381
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVF+P+G + L KGA VD+AY +HTE+G++ A+VNG +V L N ++
Sbjct: 382 LFDDTVFVFSPKGAVFELTKGACPVDFAYRVHTEVGHRCTGARVNGRIVPLDLPLENGDI 441
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK-FLREQ 660
VEI+T SKS + WL KT SA+ +I + F RE+
Sbjct: 442 VEILT-----SKSTIGPSRDWLNFVKTSSAKSRIRQWFNREK 478
>gi|421207077|ref|ZP_15664129.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
gi|421292516|ref|ZP_15743250.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA56348]
gi|421312453|ref|ZP_15763055.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58981]
gi|395574413|gb|EJG34991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
gi|395891823|gb|EJH02817.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA56348]
gi|395909307|gb|EJH20183.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58981]
Length = 740
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|422864152|ref|ZP_16910781.1| GTP diphosphokinase [Streptococcus sanguinis SK408]
gi|327472975|gb|EGF18402.1| GTP diphosphokinase [Streptococcus sanguinis SK408]
Length = 739
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/527 (38%), Positives = 308/527 (58%), Gaps = 55/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L T YL+ ++ +++AL+ A + H GQ RRSGEP+I+HP++VA IL L+LD ++A
Sbjct: 13 LALTRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILATLKLDAVTVA 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
G LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++
Sbjct: 73 CGFLHDVVEDTHA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K
Sbjct: 125 RKMLMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+LSF Y N ++ K+ + + +E E +EE +++KIE + + +I
Sbjct: 185 WELEDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + + +E+ + +R I+ Q Y +LG +H
Sbjct: 239 YGRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH
Sbjct: 287 ELWRPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V ++ A+ ++W+ + E Q++ + +++FV
Sbjct: 343 WAYKKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEIIT NA ++F + WL KT AR+KI +F + Q
Sbjct: 443 LRTGDQVEIIT-NA----NSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|256826847|ref|YP_003150806.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
gi|256582990|gb|ACU94124.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
Length = 856
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/533 (39%), Positives = 300/533 (56%), Gaps = 59/533 (11%)
Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+PE + DL + YL+ +E +L+RRA A AH GQ R+SGEPF+ HPVEVA IL +
Sbjct: 111 TPEERFADLDEACAVYLNEDERDLLRRAFEFARSAHKGQCRKSGEPFVSHPVEVALILSD 170
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L +D E++AA LLHD VEDT+ T E + EFG V +V+G TK++++ E +
Sbjct: 171 LRMDAETLAAALLHDVVEDTDT-TKEELAHEFGEAVADLVDGVTKITRI-------EVEN 222
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ D +A +R+MF+AM +++RVI++KLADRLHNMRTLS + ++ + ETL+++AP+A
Sbjct: 223 LSDEQAATIRKMFVAMNKDIRVIVIKLADRLHNMRTLSALREDRRIFKSHETLEIYAPIA 282
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ QIK ELE+L+F Y + ++ R VA+ E E+ L IL ++E
Sbjct: 283 HRLGIGQIKWELEDLAFFYLEPGKFKQISRMVAESRMEREEYLGNVIDILHGEMEK---- 338
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ +I K YSIY+ + +E+ + +RII+
Sbjct: 339 --ADIGCQIMGRPKHLYSIYRKMTTHGKGFSEIYDLIAVRIIVDTVAQ------------ 384
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG VH +W P+P KDYIA PK N YQSLHTT+I + LEVQIRTEEM
Sbjct: 385 CYSALGAVHSLWHPMPGRFKDYIAMPKYNMYQSLHTTVIG---PAGRPLEVQIRTEEMHR 441
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
++E G+AAH+ + G G R +++WL + +WQ+E
Sbjct: 442 MSEYGVAAHWRYKEGAKGESGFDR--------------------QLAWLRQMMDWQDE-- 479
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
SREF+ ++ DL S VFVFTP+G+ +L GAT VD+AY IHTE+GN V AKVN
Sbjct: 480 -TQDSREFLKSLKVDLAPSEVFVFTPQGDAMSLRAGATPVDFAYAIHTEVGNHCVGAKVN 538
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
G++V ++ L + VEI+T + + WL KT AR KI +
Sbjct: 539 GSIVPLSYELQMGDRVEILTQKSAAPSQG------WLSLVKTPRARSKIRAYF 585
>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 766
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 317/552 (57%), Gaps = 88/552 (15%)
Query: 128 ERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
++L++ L I P+ ++ L+ +A +A EAH+GQ R+SGE +IIHP V IL +LE
Sbjct: 32 DQLYDALIARIRKYHPSTDISLIEKAYRIAKEAHEGQVRKSGEAYIIHPTWVGLILADLE 91
Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
LD E+IAAG+LHD VEDT V+T E I EEFG+ V +V+G V+KLG+L + VQ
Sbjct: 92 LDKETIAAGILHDVVEDT-VMTEEEITEEFGSEVALLVDG---VTKLGQLSYSADKLEVQ 147
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
A++LR+MFLAM +++RVI++KLADRLHNMRTL M P KQ A ET+ ++AP+A+
Sbjct: 148 ---AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFMRPEKQKEKARETMDIYAPIAQR 204
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LG+ +IK+EL++L+ Y+ + + + N+I +K E ++F+
Sbjct: 205 LGISKIKTELDDLALKYSQPDVFYDL-----------------VNQINARKTEREEFVQQ 247
Query: 367 M-----------TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+ +K E+ K +SIYK ++ +++++ + +RII+
Sbjct: 248 IVEEVSTHMKNANIKAEVYGRVKHFFSIYKKMVNQDKTVDQIYDLFAIRIIV-------- 299
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESM 470
+ CY LG +H ++TPIP KDYIA PKPN YQSLHTTL+ PF
Sbjct: 300 ----DSVKDCYAALGAIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPAGQPF----- 350
Query: 471 FRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRI 530
E+QIRT EM AE GIAAH+ + +G S K+V ++
Sbjct: 351 ---EIQIRTVEMHKTAEYGIAAHWK-----------YKESGGSE--KSVATRAEE---KL 391
Query: 531 SWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAY 588
SWL I EWQ+ + +REF+ + DL V+ FTP G++KNLP G+T VD+AY
Sbjct: 392 SWLRQILEWQQ----DTDNREFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAY 447
Query: 589 MIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRS 648
IH+ +GNKMV A+VNG LV + + N + +E++T S+++ + WL K+
Sbjct: 448 AIHSAVGNKMVGARVNGKLVPIDYKIQNGDRIEVLT-----SQNSKGPSRDWLNIVKSTQ 502
Query: 649 ARHKIMKFLREQ 660
AR+KI ++ +++
Sbjct: 503 ARNKINQWFKKE 514
>gi|149006712|ref|ZP_01830398.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
gi|417677371|ref|ZP_12326778.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17545]
gi|418112984|ref|ZP_12749984.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41538]
gi|418155629|ref|ZP_12792356.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16242]
gi|418226026|ref|ZP_12852654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP112]
gi|419467257|ref|ZP_14007138.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05248]
gi|419513035|ref|ZP_14052667.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05578]
gi|419517242|ref|ZP_14056858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02506]
gi|421283781|ref|ZP_15734567.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04216]
gi|147761627|gb|EDK68591.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
gi|332072812|gb|EGI83293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17545]
gi|353783346|gb|EHD63775.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41538]
gi|353819878|gb|EHE00067.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16242]
gi|353881223|gb|EHE61037.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP112]
gi|379543004|gb|EHZ08156.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05248]
gi|379634200|gb|EHZ98765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05578]
gi|379639315|gb|EIA03859.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02506]
gi|395880467|gb|EJG91519.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04216]
Length = 740
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|417793474|ref|ZP_12440750.1| GTP diphosphokinase [Streptococcus oralis SK255]
gi|334272884|gb|EGL91238.1| GTP diphosphokinase [Streptococcus oralis SK255]
Length = 738
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEEYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLTMVKTSKARNKIRQFFKNQ 484
>gi|304380769|ref|ZP_07363437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|304340706|gb|EFM06638.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
Length = 736
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 308/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYWKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>gi|148984077|ref|ZP_01817372.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
gi|148997693|ref|ZP_01825257.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
gi|149001918|ref|ZP_01826872.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
gi|149021265|ref|ZP_01835511.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
gi|168483486|ref|ZP_02708438.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1873-00]
gi|168487265|ref|ZP_02711773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1087-00]
gi|168491474|ref|ZP_02715617.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC0288-04]
gi|168575168|ref|ZP_02721131.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae MLV-016]
gi|221232384|ref|YP_002511537.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
gi|225855074|ref|YP_002736586.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae JJA]
gi|225859401|ref|YP_002740911.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae 70585]
gi|237649193|ref|ZP_04523445.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CCRI 1974]
gi|237822270|ref|ZP_04598115.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CCRI 1974M2]
gi|298230751|ref|ZP_06964432.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254448|ref|ZP_06978034.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298503389|ref|YP_003725329.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
gi|307068272|ref|YP_003877238.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pneumoniae AP200]
gi|387757872|ref|YP_006064851.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
gi|410477019|ref|YP_006743778.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
gi|415700108|ref|ZP_11457822.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
gi|417694521|ref|ZP_12343708.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47901]
gi|417696807|ref|ZP_12345985.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47368]
gi|417699029|ref|ZP_12348200.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41317]
gi|418083450|ref|ZP_12720647.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44288]
gi|418085638|ref|ZP_12722817.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47281]
gi|418092250|ref|ZP_12729390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44452]
gi|418101106|ref|ZP_12738189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7286-06]
gi|418103334|ref|ZP_12740406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP070]
gi|418108073|ref|ZP_12745110.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41410]
gi|418110612|ref|ZP_12747631.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49447]
gi|418119093|ref|ZP_12756050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18523]
gi|418121701|ref|ZP_12758644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44194]
gi|418123968|ref|ZP_12760899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44378]
gi|418128512|ref|ZP_12765405.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP170]
gi|418137706|ref|ZP_12774544.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11663]
gi|418144591|ref|ZP_12781386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13494]
gi|418151151|ref|ZP_12787897.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14798]
gi|418162690|ref|ZP_12799371.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17328]
gi|418169744|ref|ZP_12806385.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19077]
gi|418171783|ref|ZP_12808407.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19451]
gi|418176434|ref|ZP_12813025.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41437]
gi|418178690|ref|ZP_12815273.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41565]
gi|418183172|ref|ZP_12819730.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43380]
gi|418185395|ref|ZP_12821936.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47283]
gi|418194211|ref|ZP_12830700.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47439]
gi|418196305|ref|ZP_12832781.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47688]
gi|418219374|ref|ZP_12846039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP127]
gi|418221675|ref|ZP_12848328.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47751]
gi|418223847|ref|ZP_12850487.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5185-06]
gi|418232644|ref|ZP_12859230.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07228]
gi|418237099|ref|ZP_12863665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19690]
gi|418239172|ref|ZP_12865723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|419423425|ref|ZP_13963638.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43264]
gi|419425588|ref|ZP_13965784.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7533-05]
gi|419427703|ref|ZP_13967884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5652-06]
gi|419429845|ref|ZP_13970009.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11856]
gi|419436441|ref|ZP_13976528.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 8190-05]
gi|419445153|ref|ZP_13985168.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19923]
gi|419447304|ref|ZP_13987309.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7879-04]
gi|419449433|ref|ZP_13989429.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4075-00]
gi|419450971|ref|ZP_13990957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP02]
gi|419453803|ref|ZP_13993773.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP03]
gi|419458232|ref|ZP_13998174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02254]
gi|419460455|ref|ZP_14000383.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02270]
gi|419462808|ref|ZP_14002711.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02714]
gi|419471531|ref|ZP_14011390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07914]
gi|419473699|ref|ZP_14013548.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13430]
gi|419475975|ref|ZP_14015811.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14688]
gi|419482683|ref|ZP_14022470.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40563]
gi|419487120|ref|ZP_14026882.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44128]
gi|419489123|ref|ZP_14028872.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44386]
gi|419491545|ref|ZP_14031283.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47179]
gi|419495828|ref|ZP_14035545.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47461]
gi|419504382|ref|ZP_14044050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47760]
gi|419506529|ref|ZP_14046190.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49194]
gi|419510910|ref|ZP_14050551.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP141]
gi|419526363|ref|ZP_14065921.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
gi|419532845|ref|ZP_14072360.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
gi|421209412|ref|ZP_15666425.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
gi|421211518|ref|ZP_15668500.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
gi|421213581|ref|ZP_15670535.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
gi|421215743|ref|ZP_15672664.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
gi|421225474|ref|ZP_15682212.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
gi|421232350|ref|ZP_15688991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
gi|421238974|ref|ZP_15695538.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
gi|421241108|ref|ZP_15697653.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
gi|421245484|ref|ZP_15701982.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
gi|421249874|ref|ZP_15706331.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
gi|421275360|ref|ZP_15726189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52612]
gi|421287915|ref|ZP_15738678.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58771]
gi|421290206|ref|ZP_15740956.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54354]
gi|421302886|ref|ZP_15753550.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17484]
gi|421305598|ref|ZP_15756252.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA62331]
gi|421307838|ref|ZP_15758480.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60132]
gi|421314520|ref|ZP_15765107.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47562]
gi|444387046|ref|ZP_21185072.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
gi|444389255|ref|ZP_21187172.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
gi|444393017|ref|ZP_21190678.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
gi|444398095|ref|ZP_21195578.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
gi|444399732|ref|ZP_21197168.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
gi|444403009|ref|ZP_21200132.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
gi|444405187|ref|ZP_21202105.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
gi|444407712|ref|ZP_21204379.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
gi|444416600|ref|ZP_21212688.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
gi|444419906|ref|ZP_21215740.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
gi|147756192|gb|EDK63234.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
gi|147759727|gb|EDK66717.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
gi|147923366|gb|EDK74479.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
gi|147930366|gb|EDK81350.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
gi|172043164|gb|EDT51210.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1873-00]
gi|183569827|gb|EDT90355.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1087-00]
gi|183574171|gb|EDT94699.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC0288-04]
gi|183578856|gb|EDT99384.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae MLV-016]
gi|220674845|emb|CAR69420.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
gi|225720921|gb|ACO16775.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae 70585]
gi|225722569|gb|ACO18422.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae JJA]
gi|298238984|gb|ADI70115.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
gi|301800461|emb|CBW33097.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
gi|306409809|gb|ADM85236.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pneumoniae AP200]
gi|332199675|gb|EGJ13750.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41317]
gi|332200205|gb|EGJ14278.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47368]
gi|332201070|gb|EGJ15141.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47901]
gi|353754670|gb|EHD35282.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44288]
gi|353756347|gb|EHD36948.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47281]
gi|353762950|gb|EHD43507.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44452]
gi|353770606|gb|EHD51118.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7286-06]
gi|353774635|gb|EHD55122.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP070]
gi|353778350|gb|EHD58818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41410]
gi|353781233|gb|EHD61678.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49447]
gi|353791045|gb|EHD71426.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18523]
gi|353792537|gb|EHD72909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44194]
gi|353795788|gb|EHD76134.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44378]
gi|353799011|gb|EHD79334.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP170]
gi|353807057|gb|EHD87329.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13494]
gi|353814361|gb|EHD94587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14798]
gi|353826752|gb|EHE06909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17328]
gi|353833723|gb|EHE13831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19077]
gi|353835520|gb|EHE15614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19451]
gi|353840505|gb|EHE20569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41437]
gi|353842749|gb|EHE22795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41565]
gi|353848155|gb|EHE28172.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43380]
gi|353848679|gb|EHE28691.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47283]
gi|353857789|gb|EHE37751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47439]
gi|353860316|gb|EHE40261.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47688]
gi|353873734|gb|EHE53593.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP127]
gi|353874985|gb|EHE54839.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47751]
gi|353878645|gb|EHE58475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5185-06]
gi|353885957|gb|EHE65741.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07228]
gi|353891537|gb|EHE71291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19690]
gi|353892163|gb|EHE71912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|353900661|gb|EHE76212.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11663]
gi|379529896|gb|EHY95137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02254]
gi|379530240|gb|EHY95480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02714]
gi|379530591|gb|EHY95830.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02270]
gi|379546247|gb|EHZ11386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07914]
gi|379550023|gb|EHZ15125.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11856]
gi|379550863|gb|EHZ15959.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13430]
gi|379557003|gb|EHZ22050.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
gi|379558757|gb|EHZ23789.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14688]
gi|379572846|gb|EHZ37803.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19923]
gi|379579275|gb|EHZ44182.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40563]
gi|379585489|gb|EHZ50345.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44128]
gi|379585997|gb|EHZ50851.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43264]
gi|379586665|gb|EHZ51515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44386]
gi|379592907|gb|EHZ57722.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47179]
gi|379593914|gb|EHZ58725.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47461]
gi|379605365|gb|EHZ70116.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
gi|379605770|gb|EHZ70520.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47760]
gi|379608443|gb|EHZ73189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49194]
gi|379612880|gb|EHZ77595.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 8190-05]
gi|379614844|gb|EHZ79554.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7879-04]
gi|379617896|gb|EHZ82576.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5652-06]
gi|379619049|gb|EHZ83723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7533-05]
gi|379622051|gb|EHZ86687.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4075-00]
gi|379622676|gb|EHZ87310.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP02]
gi|379625873|gb|EHZ90499.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP03]
gi|379631513|gb|EHZ96090.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP141]
gi|381314804|gb|EIC55570.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
gi|395572626|gb|EJG33221.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
gi|395573508|gb|EJG34098.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
gi|395578812|gb|EJG39322.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
gi|395579950|gb|EJG40445.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
gi|395588961|gb|EJG49283.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
gi|395594853|gb|EJG55088.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
gi|395600617|gb|EJG60772.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
gi|395607486|gb|EJG67583.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
gi|395608011|gb|EJG68107.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
gi|395613568|gb|EJG73596.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
gi|395873324|gb|EJG84416.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52612]
gi|395886478|gb|EJG97494.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58771]
gi|395887891|gb|EJG98905.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54354]
gi|395901508|gb|EJH12444.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17484]
gi|395904556|gb|EJH15470.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA62331]
gi|395907223|gb|EJH18117.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60132]
gi|395913205|gb|EJH24058.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47562]
gi|406369964|gb|AFS43654.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
gi|429319837|emb|CCP33151.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034183]
gi|429321653|emb|CCP35125.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994039]
gi|429323474|emb|CCP31166.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994038]
gi|444254256|gb|ELU60702.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
gi|444257855|gb|ELU64188.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
gi|444260752|gb|ELU67060.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
gi|444262604|gb|ELU68895.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
gi|444265436|gb|ELU71445.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
gi|444268296|gb|ELU74165.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
gi|444271308|gb|ELU77059.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
gi|444274968|gb|ELU80601.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
gi|444285465|gb|ELU90524.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
gi|444286011|gb|ELU91019.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
Length = 740
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|417923789|ref|ZP_12567246.1| RelA/SpoT family protein [Streptococcus mitis SK569]
gi|342836671|gb|EGU70882.1| RelA/SpoT family protein [Streptococcus mitis SK569]
Length = 740
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSKEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E+ + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLEN--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|349611483|ref|ZP_08890718.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
gi|348608576|gb|EGY58556.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
Length = 750
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V +A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNEEHVAFVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT E I++EFG V IVEG TK+ K+ +E + AD+ R+M +A
Sbjct: 79 TVEDT-PVTNEDIKKEFGKDVAFIVEGVTKLKKIKYKSKTHEEYL-----ADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E+ + A L ++D + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSERERYISSAISTLKANLDD------LGIKYEIFGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH WTP+
Sbjct: 247 IYSIYKKMVNKHKEFSEIYDLLAVRVIVK------------TVRDCYAVLGAVHTKWTPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M IAE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V V +P K +I I E Q+E S EF++++ D
Sbjct: 352 VQTAV------TETPSSK-----------KIDMFREILELQDE---TKDSHEFMNSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+ YMIH+E+G V AKVN +V + L N +V
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSVPLDFGYMIHSEVGAHSVGAKVNDKIVPLDYQLKNGDV 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +S+ + W++ KT SAR+KI +F + +
Sbjct: 452 VEMLT------QSSATPSRDWIKLVKTSSARNKIKRFFKSE 486
>gi|268319355|ref|YP_003293011.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
gi|262397730|emb|CAX66744.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
Length = 749
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 298/521 (57%), Gaps = 53/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ L V A A +AH+GQ R SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNDEHLAFVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+E+FG V IV+G V+KL K++ K+++H ++ AD+ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKEKFGKDVAFIVDG---VTKLSKIQYKSKSH--EEYLADNHRKMLIA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK ELE++
Sbjct: 133 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDM 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E E + +A L Q LD + +K EI K
Sbjct: 193 SLHYLNPQQYYRIVNLMQSKRSEREGYIADAISTLK------QTLDSLGIKYEIYGRPKH 246
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I+K + CY VLG VH W P+
Sbjct: 247 IYSIYKKMVNKHKDFSEIYDLLAVRVIVK------------SVKDCYAVLGAVHTKWKPM 294
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE M +AE G+AAH++ +
Sbjct: 295 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
V G V N +++ I E Q E S EF+ ++ D
Sbjct: 352 VKGEVEQTDANK-----------------KLNMFQEILELQNE---TKDSHEFMKSVKTD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+G++ LPKG+ +D+AYMIH+E+G V A++NG +V + L ++
Sbjct: 392 IFSDRVYVFTPKGDVYELPKGSGPLDFAYMIHSEVGAHSVGARINGKIVPLDYKLKTGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VE++T +++ + + W+ KT AR+KI +F + +
Sbjct: 452 VEMLT------QASSRPSRDWVNLVKTSRARNKIKRFFKAE 486
>gi|366053217|ref|ZP_09450939.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus suebicus KCTC 3549]
Length = 728
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 299/518 (57%), Gaps = 52/518 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
++ ++LV A A AH+ Q+RRSGEP+IIHPV+VA IL +L +D E++ AG LHD
Sbjct: 1 MNAEHVKLVESAYHFADTAHNDQRRRSGEPYIIHPVQVAGILAKLHMDPETVVAGYLHDI 60
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VEDT VV E + E FG V IV+G+TK+SK+ K K E A++ R++ LAM
Sbjct: 61 VEDTGVV-LEDVRELFGPEVAMIVDGDTKLSKI-KYKSNKEQ------MAENHRKLLLAM 112
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE+LS
Sbjct: 113 SKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDLS 172
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
Y N + Y ++ V + ++ +E N+ + + + LDL TEI K
Sbjct: 173 LRYLNPQQYYRI---VHLMNSRRDQRIEYINRAIDDIKDAIKDLDLGN-GTEIYGRPKHI 228
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
YSIY+ ++ +++ + +R++++ + CY VLG +H WTP+P
Sbjct: 229 YSIYRKMVTKHKQFSQIYDLLAIRVVVESI------------KDCYAVLGAIHTSWTPMP 276
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYIA PK NGYQSLHTT++ LEVQIRT EM +AE G+AAH++ +
Sbjct: 277 GRFKDYIAMPKVNGYQSLHTTVVG---PEGRPLEVQIRTHEMHEVAELGVAAHWAYK--- 330
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
G+T + ++ +++ I E Q E + + EF+ + D+
Sbjct: 331 --------------EGRTNGVKQSDSGNKLNLFKEILELQSE---SSDADEFMQGVQGDI 373
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
RV+ FTP+G++ LPKGA +D AY IHTE+GNK AKVNG +V + + N ++V
Sbjct: 374 FADRVYAFTPKGDVLELPKGAGPLDMAYTIHTEVGNKTTGAKVNGKIVPLDYEIKNGDIV 433
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+I+T S S+ + WL TR AR+KI +F R
Sbjct: 434 DILT-----SSSSAGPSRDWLNLVSTRRARNKIKQFFR 466
>gi|419766493|ref|ZP_14292690.1| RelA/SpoT family protein [Streptococcus mitis SK579]
gi|383354062|gb|EID31645.1| RelA/SpoT family protein [Streptococcus mitis SK579]
Length = 740
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREVLVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|421487778|ref|ZP_15935176.1| GTP diphosphokinase [Streptococcus oralis SK304]
gi|400369740|gb|EJP22737.1| GTP diphosphokinase [Streptococcus oralis SK304]
Length = 738
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TREYLTKEDVAFVQKALIYAVDCHSGQFRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRIIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+A++E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAISEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K + L KE +E E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYK----ITHLMKEKRREREALVDEVVTKLE--EYTSERNLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|307243827|ref|ZP_07525958.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
gi|306492830|gb|EFM64852.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
Length = 741
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 313/532 (58%), Gaps = 60/532 (11%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
++L I +PN +++ V RA LA EAH Q R+SGEP+IIHPV VA IL ++ELD +
Sbjct: 7 QNLIEKIKAYAPNADIDKVVRAYNLAKEAHKDQFRKSGEPYIIHPVAVANILADMELDID 66
Query: 191 SIAAGLLHDTVEDTNVVTFER--IEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I GLLHD VEDT+ FE IEE FG V +V+G V+KLGK+K + S
Sbjct: 67 TICGGLLHDVVEDTD---FEEADIEEMFGKDVAALVDG---VTKLGKIKYMTKEES---- 116
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A +LR+MF+AM +++RV+++KL+DRLHNMRTL +M +K A ETL ++A +A LG
Sbjct: 117 QASNLRKMFMAMAKDMRVMLIKLSDRLHNMRTLEYMDSNKVKYKAQETLDIYAGIAHRLG 176
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK ELE+L+F + ++Y ++ RV ++ E ++E I+ K ++D
Sbjct: 177 ISTIKWELEDLAFRFLYPDEYYELVNRVNKKREQREAYIDEIVTIIKKDMDD------KG 230
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
V+ ++ K YSI+K + K S +E+ + +R+ L + CY V
Sbjct: 231 VECDVYGRPKHFYSIFKKMKKKNKSFDEIYDLTAVRV------------LVDTDRDCYAV 278
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG VH +W PIP KDYIA PKPN YQSLHTT+I E +E+QIRT EM +AE
Sbjct: 279 LGEVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGSDGEP---VEIQIRTYEMHNVAEF 335
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + VT N S ++ R+ WL + EW+++
Sbjct: 336 GIAAHWKYKEGVTD-------NSLS-----------DVDRRLQWLRQMMEWEKDVT---D 374
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
EF+D + D+ ++V+VFTP+G++ LP GAT +D+AY IH+++GNK V AKVNG +V
Sbjct: 375 PYEFLDALKEDVFNAQVYVFTPQGDVLELPNGATPIDFAYRIHSKVGNKCVGAKVNGRIV 434
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N ++VEI+T S ++ + W+ KT +AR+KI +F +++
Sbjct: 435 PLEYKLKNGQIVEILT-----SANSLGPSRDWMNLVKTPNARNKIKQFFKKE 481
>gi|262199001|ref|YP_003270210.1| (p)ppGpp synthetase I SpoT/RelA [Haliangium ochraceum DSM 14365]
gi|262082348|gb|ACY18317.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
Length = 728
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 311/545 (57%), Gaps = 60/545 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL L +Y + ++ EL+RRA A EAH+GQ RRSG+P++ HP+ VA I+ +L LD
Sbjct: 3 RLDNILDTVSTYDAKSDTELIRRAYEYAAEAHEGQTRRSGDPYVTHPLSVAGIVADLRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I A LLHD VEDT+ T E I FG V +V+G V+KLGKL S ++
Sbjct: 63 GATICAALLHDAVEDTS-ATIEDITSMFGKEVAFLVDG---VTKLGKLPYT----SREER 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM ++RVI++K DRL NMRTL H+P KQ IA+ETLQ++APLA +G
Sbjct: 115 QAENFRKMLLAMARDIRVILLKFCDRLDNMRTLDHLPSEKQERIASETLQIYAPLAHRIG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y E+Y + VA KE + + + +++ K++ + +
Sbjct: 175 IQWIKTELEDLSFKYLYREEYDDLAGDVAKTRKERNRYIVDVERLIYKEMAKN------S 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
V+ ++ K +SI + + +++ NE++ R++ + Q+ CY
Sbjct: 229 VRCKVTGRAKHLWSIRQKMQRTKRPYNEIHDAIGFRVVTE------------NQRGCYEA 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG+VH WTPIP KDYIA PKPNGYQSLHT +I E R+E+QIRT+EM +AE
Sbjct: 277 LGVVHAAWTPIPGRFKDYIALPKPNGYQSLHTAVIGPKGE---RIEIQIRTDEMHAVAEY 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + GK LN ++ + +WL + E Q++
Sbjct: 334 GIAAHW-----------------KYKEGKPAVLNGSDA--KFAWLRQLMESQKDL---KD 371
Query: 549 SREFVDTITRDLLG-SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
EF++++ DL G VFVFTP+G++K LP G+ +D+AY +H+++G+ A+VNG +
Sbjct: 372 PTEFIESVKIDLFGEDEVFVFTPQGDVKALPMGSCPIDFAYTVHSKVGDHCSGARVNGMI 431
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQR-HKQWLEHAKTRSARHKIMKFLREQAALSAS 666
V + L N + VEIIT S Q+ ++ WL+ +T A+ +I LR + A
Sbjct: 432 VPLRYQLRNGDTVEIIT-------SPNQKPNRDWLKLVRTARAKTRIRHKLRTEERDRAF 484
Query: 667 EITAD 671
+ D
Sbjct: 485 RLGKD 489
>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
Length = 727
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 310/531 (58%), Gaps = 68/531 (12%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
++ I+Y ++ +R+A +A AH Q R SGEP+I HP+ VA+IL +LELD E++A
Sbjct: 5 IQKLINYNPKADIAFLRKAYNVAEAAHRNQWRISGEPYIFHPLAVAKILADLELDIEALA 64
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
LLHD VEDT + T + IE++FG+ V +V+G TK+SK+ K K E+ +A++L
Sbjct: 65 GALLHDVVEDTEI-TLQDIEKDFGSEVALLVDGVTKLSKID-FKSKEEH------QAENL 116
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+MFLAM +++RVI++KLADRLHN+RTL P KQ IA ETL++FAPLA LG+Y +K
Sbjct: 117 RKMFLAMAKDIRVILIKLADRLHNLRTLGAQPEAKQKEIALETLEIFAPLAHRLGIYHLK 176
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
E+E+L+F + Y ++ +VA + E+++ E ++L KK F+D+ +K +I
Sbjct: 177 WEIEDLAFRFLQPSKYYELADKVAKTRNKREEDINEIIEVLKKK-----FIDV-GIKADI 230
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
+ K YSIY+ + + + ++ I +R+ + + CY LG+VH
Sbjct: 231 QGRPKHLYSIYEKMQRQKKDFAQILDIMAVRVTV------------DTVKDCYGTLGIVH 278
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAER 488
+W PIP KDYIA PK N YQSLHTT+I PF E+Q+RT EM AE
Sbjct: 279 TLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGDPF--------EIQMRTWEMHRTAEY 330
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + G GHA+ + GK + WL + EWQ +
Sbjct: 331 GIAAHWC---YKEG--GHAQ---KGFDGKLI------------WLRQLLEWQHDM---RD 367
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
++EF++ + D+ VFVF+P+G+I LP A +D+A+ IHT++GN+ + AKVNG +V
Sbjct: 368 AKEFIEGLKIDIFAESVFVFSPKGDIIELPAEAVPIDFAFRIHTDVGNRCMGAKVNGRIV 427
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L N ++VE++T N + WL+ KT A+++I ++ R+
Sbjct: 428 PLDYKLKNGDIVEVLTSNHARPS------RDWLKIVKTSQAKNRIRQYFRK 472
>gi|387788694|ref|YP_006253762.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
gi|379138436|gb|AFC95227.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
Length = 740
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVYFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|421489591|ref|ZP_15936968.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
gi|400374658|gb|EJP27574.1| GTP diphosphokinase [Streptococcus anginosus SK1138]
Length = 738
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ LV++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVTLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE ++ KIE + + EI
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|417687089|ref|ZP_12336363.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41301]
gi|418160348|ref|ZP_12797047.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17227]
gi|419521575|ref|ZP_14061170.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
gi|332073979|gb|EGI84457.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41301]
gi|353822081|gb|EHE02257.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17227]
gi|379538875|gb|EHZ04055.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
Length = 740
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+ ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIV-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|292670701|ref|ZP_06604127.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
gi|292647647|gb|EFF65619.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
Length = 746
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 304/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY + +LE +++A A +AH GQ R SG+ +I+HP+ VA IL L LD E++ A LLH
Sbjct: 23 SYQADADLEKIKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETVCAALLH 82
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+ T E +E EFG + +++G V+KLG++ E S +DVK ++ R+MFL
Sbjct: 83 DVVEDTHA-TLEEMEAEFGRNIMALIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 134
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M K+ IA ET++V+APLA LG+ IK ELE+
Sbjct: 135 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELED 194
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y E Y + V +E ++ + ++ + + +K+E +K EI+ K
Sbjct: 195 LCLRYLEPEAYYALVEEVKHKRQERQEFILDSIQKIHEKLE------AADIKAEIKGRAK 248
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S+NE+ ++ +RI L S + CY VLG++H +W P
Sbjct: 249 HFYSIYRKMKRDNKSVNEIYDLSAVRI------------LVSSVKDCYGVLGVIHAMWKP 296
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK NGYQSLHTT++ Y LE+QIRTE M I+E G+AAH+ +
Sbjct: 297 IPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTEAMHRISEFGVAAHWKYK- 351
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+++ + + N ++SWL + Q+E+ +EF + +
Sbjct: 352 ---------------EAGRSIGVTDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N +
Sbjct: 393 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V I+T A + S WL + + R KI + +++
Sbjct: 453 IVSIVTNKASNGPSP-----DWLNTVASSATRGKIRAWFKKE 489
>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 723
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 304/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRAG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|339448283|ref|ZP_08651839.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus fructivorans KCTC
3543]
Length = 741
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 312/561 (55%), Gaps = 61/561 (10%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
KE +P+ ++++ YL N+++++++A A AH+ QKR SG+P+I HPVEVA IL
Sbjct: 5 KEWTPKEIFDEAS---EYLDKNDIQMIKKAYKFAKIAHEDQKRASGQPYINHPVEVAGIL 61
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
+L +D E+I AG LHD VEDT T I E FG V IV+G VSKL K+K K+
Sbjct: 62 TDLHMDAETITAGFLHDVVEDTGA-TIGDITELFGDHVSLIVDG---VSKLSKIKYKSSK 117
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+ A++ R++ LAM +++RV+IVKLADRLHNM TL + P KQ IA ETL ++AP
Sbjct: 118 EQL----AENHRKLLLAMCKDIRVMIVKLADRLHNMETLDALRPDKQKRIAQETLDIYAP 173
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK ELE+LS Y +DY ++ + E + A +KK++ Q
Sbjct: 174 LADRLGIGTIKWELEDLSLRYLKPDDYYEIVNLMNSKRNERVAYVNRA----VKKVQ--Q 227
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
++ + +K E+ K YSIY+ + E+ + +R+I+K
Sbjct: 228 AIEGLGIKGEVYGRPKHIYSIYRKMHDKHKDFKEIYDLLAVRVIVK------------SV 275
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY VLG +H W P P KDYIA PKPN YQSLHTT++ LE+QIRTEEM
Sbjct: 276 KDCYAVLGAIHTEWKPFPDRFKDYIAMPKPNMYQSLHTTVVG---PEGKPLEIQIRTEEM 332
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKT--VCLNNANIALRISWLNAIREWQ 540
IAE G+AAH++ + GKT V N +N+ L + I E Q
Sbjct: 333 HRIAEYGVAAHWAYK-----------------EGKTDEVESNKSNVQLNL--FKKIIEIQ 373
Query: 541 EEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVA 600
EE + + +F+D++ DL RV+ FTP G++ LPKG+ +D AY IHT++GN
Sbjct: 374 EE---SENASDFMDSVQGDLFSDRVYAFTPSGDVIELPKGSIPIDMAYSIHTDVGNSTTG 430
Query: 601 AKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
A+VNG LV + + N ++V+IIT S S+ K W+ KTR A+HKI +F +
Sbjct: 431 ARVNGKLVPLDYEIKNGDIVDIIT-----SSSSDGPGKNWMSMVKTRRAKHKIKQFFKRS 485
Query: 661 AALSASEITADTVGDFVADSG 681
+ +T+ + DSG
Sbjct: 486 SHDDDINSGKETLEKDIVDSG 506
>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
Length = 739
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 313/539 (58%), Gaps = 57/539 (10%)
Query: 123 KEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARI 181
K D ER ++ L + Y E+ +R A LA AH GQKR SGE +I+HP+ V I
Sbjct: 17 KPDPAERAFDLLCEKVRGYAEDGEILRLREAYTLAKAAHAGQKRSSGEDYILHPIAVTEI 76
Query: 182 LGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE 241
L +L LD ++ A LLHD VEDT V T E I + FG V +V+G TK+ ++ +
Sbjct: 77 LADLHLDGTTLTAALLHDVVEDTPV-TLEEIGKRFGPEVVALVDGVTKLRRI-------Q 128
Query: 242 NHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFA 301
+ ++ +A++LR+M LAM +++RVI++KLADRLHNMRTL H+P KQ IA ETL++FA
Sbjct: 129 YATREEQQAENLRKMLLAMAKDIRVILIKLADRLHNMRTLRHVPEQKQMRIAKETLEIFA 188
Query: 302 PLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 361
PLA LG+ +I+ ELE+L+ Y N + Y ++ + +E E +++ L +K
Sbjct: 189 PLAHRLGISRIQWELEDLALRYLNPQQYYRIANLMTKKRREREAYIQKVIDTLREK---- 244
Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
F++L +K +I K YS+Y+ ++ E+ + +R+I+
Sbjct: 245 -FVEL-NIKADISGRPKHIYSVYRKMVNQNKQFGEIYDLLAVRVIV------------DN 290
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
+ CY +LG+VH +W P+P KDYIA PKPN YQSLHTT+I E LE+QIRT E
Sbjct: 291 IKDCYAILGVVHTLWRPLPGRFKDYIAMPKPNMYQSLHTTVIGPQGEP---LEIQIRTWE 347
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M AE GIAAH+ ++ G G+T ++ + +++W I EWQ+
Sbjct: 348 MHRTAEYGIAAHW---LYKQG-------------GRT---SDPSFQQKLAWFREILEWQQ 388
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
+F +++F++T+ DL VFVFTP+G++ LP G+ +D+AY IHT+IGN+ V A
Sbjct: 389 DF---RDAQDFMETLKVDLFSDEVFVFTPKGDVVALPTGSVPIDFAYRIHTDIGNRCVGA 445
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VNG +V + L ++VEI+T SK ++ + WL+ K+ A+ +I ++ +++
Sbjct: 446 RVNGRIVPLDYQLKTGDIVEILT-----SKHSYGPSRDWLKIVKSSQAKSRIRQWFKKE 499
>gi|418324872|ref|ZP_12936094.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
gi|365223674|gb|EHM64950.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
Length = 729
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 319/563 (56%), Gaps = 56/563 (9%)
Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
P + E L SYLSP++ E V ++ +A+EAH+GQ R++G PFI+HP++VA IL E+
Sbjct: 6 PYSVDEVLSKAKSYLSPDDYEYVLKSYHIAYEAHEGQFRKNGLPFIMHPIQVAGILTEMR 65
Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
LD +I AG LHD +EDT TF+ ++ F V IVEG TK+ K+ K + K E
Sbjct: 66 LDGPTIVAGFLHDVIEDTPY-TFDDVKNIFNEEVAVIVEGVTKLKKV-KYRSKEEQ---- 119
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
+A++ R++F+A+ ++VRVI+VKLADRLHN+RTL MP KQ I+ ETL+++APLA
Sbjct: 120 --QAENHRKLFIALAKDVRVILVKLADRLHNVRTLKAMPRDKQVCISKETLEIYAPLAHR 177
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LG+ IK ELE+ + Y ++ Y R+ +L K+ E E + + I + +
Sbjct: 178 LGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIEHAIDHINSE--MQQ 231
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
M ++ EI K YSIY+ ++K + +++ + +RII+ + CY
Sbjct: 232 MNIQGEINGRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIV------------NSINDCY 279
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
VLGLVH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IA
Sbjct: 280 AVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIA 336
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E G+AAH+ A G+ KT N +++WL +E E
Sbjct: 337 EHGVAAHW------------AYKEGKKVNSKTQDFQN-----KLNWL---KELAETDKTT 376
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
++EF++++ DL +V+ FTP+ ++ LP GA +D+AY IH+E+GNKM+ AKVNG
Sbjct: 377 SDAQEFMESLKFDLQSDKVYAFTPQSDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGK 436
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSAS 666
+ +VL ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q S
Sbjct: 437 IEPIDYVLQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKSKIRSFFKKQDRSSNI 491
Query: 667 EITADTVGDFVADSGEESEVEDL 689
E V + D G VED+
Sbjct: 492 EKGKFMVEAEIRDQG--YRVEDI 512
>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
Length = 730
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 203/519 (39%), Positives = 301/519 (57%), Gaps = 65/519 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
+++ +A A AH QKR SGEP+IIHPVEVA IL E+ LD +IAA LLHD +EDT+
Sbjct: 19 DIIIKAYNYAENAHKEQKRVSGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDY 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T+E +E +F + V +VEG V+KLGK+K K + ++ +++++R+M LAMT+++RV
Sbjct: 79 -TYEDVERDFNSEVANLVEG---VTKLGKIKFKTK----EEQQSENVRKMLLAMTKDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL +M KQ A ETL ++APLA LG+ +IK ELE+LS Y N
Sbjct: 131 ILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNP 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R+VA+ KE E+ +E L +K+ED +K+EI K YSIY+
Sbjct: 191 NEYYDLVRKVAEKRKEREEYIERIIHELSEKLED------AGIKSEIAGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ +I+++ + +RI L + CY VLG+VH ++ PIP KDY
Sbjct: 245 MVIKNKTIDQIFDLTAVRI------------LVEDVKDCYAVLGMVHTMYKPIPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLH+T+I PF E+QIRT +M +E GIAAH+ +
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYDMHNTSEYGIAAHWK---YKE 341
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
G ++ + + +++WL + EWQ E EF++ D+
Sbjct: 342 GFSKNS---------------DNDFEAKLAWLREVLEWQRE---TSNPEEFMEDFKIDMF 383
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ NLP +T +D+AY IHT+IG++ + KVNG +V + L E+VE
Sbjct: 384 SDEVFVFTPKGDVINLPSNSTPIDFAYRIHTDIGHRCIGGKVNGKIVPLDYHLKTGEIVE 443
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++T A S WL K+ A+ KI + +++
Sbjct: 444 VLTSQAPKGPSI-----SWLNMTKSNQAKSKIKSWFKKE 477
>gi|421230253|ref|ZP_15686917.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
gi|395593779|gb|EJG54021.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGVVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|389815880|ref|ZP_10207128.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
gi|388465603|gb|EIM07919.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
Length = 730
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 314/533 (58%), Gaps = 55/533 (10%)
Query: 129 RLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
R ED+ + SY++ + ++ +++A +A++AH GQ R+SGEP+I+HPV+VA IL EL++
Sbjct: 7 RTAEDVFEMVASYMNADHVKTIKKAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILAELQM 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D ++AAG LHD VEDT V + E I +F V +V+G TK+SK+ L S ++
Sbjct: 67 DPATVAAGFLHDVVEDTEV-SREDIVRDFDEEVAVLVDGVTKLSKIKYL-------SKEE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+MF+AM +++RVI++KLADRLHN+RTL + KQ A ETL++FAP+A L
Sbjct: 119 QQAENHRKMFVAMAQDIRVILIKLADRLHNLRTLKYQSVEKQRIKANETLEIFAPIAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ IK ELE+ + Y N + Y R+ +L K+ E EE +M +I LD +
Sbjct: 179 GINTIKWELEDTALRYLNPQQYY----RIVNLMKKKRTEREEYLNNVMSEIRTQ--LDEV 232
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++ ++ K YSIY+ + NE+ + +RI ++ + CY
Sbjct: 233 DIEADLFGRPKHIYSIYRKMAIQNKQFNEIYDLLAVRITVESI------------KDCYA 280
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG++H W P+P KDYIA PK N YQSLHTT+I + LEVQIRTEEM IAE
Sbjct: 281 VLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP---LEVQIRTEEMHRIAE 337
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH++ + GKT+ +++ R+SW I ++Q + +
Sbjct: 338 YGVAAHWAYK-----------------EGKTIDKPKSSVDSRLSWFREILDFQND---SD 377
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+ EF++++ DL V++F+P+G++ +P G+ +D+AY +H+EIGNK + AK+NG +
Sbjct: 378 NAEEFMESLKYDLFSDMVYIFSPKGDVIEMPAGSCPIDFAYRVHSEIGNKTIGAKINGKM 437
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L ++VEI+T SK +F + WL+ AK+ ++KI +F ++Q
Sbjct: 438 APLDTELHTGDIVEILT-----SKQSFGPSRDWLKIAKSTQTKNKIKQFFKKQ 485
>gi|406838606|ref|ZP_11098200.1| GTP pyrophosphokinase [Lactobacillus vini DSM 20605]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 299/524 (57%), Gaps = 64/524 (12%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +ELV++A A H Q+R+SGEP+I+HP++VA IL L++D ++ AG LHD
Sbjct: 19 YMNQKHVELVKKAYNFAAYVHKNQRRQSGEPYIMHPIQVAGILANLKMDPATVCAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDTNV T + E FG V IV+G V+KL K++ K S Q+ A++ R++ LA
Sbjct: 79 VVEDTNV-TLGDVGELFGHDVEVIVDG---VTKLSKIRYK----SHQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL+H+ P KQ IA ETL+++APLA LG+ IK ELE++
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLNHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E + A + + I D + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSKRAERVAYINRAIEEIKGAIAD------LHLNCEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + +++ + +R+I+ + + CY VLG +H W P+
Sbjct: 245 IYSIYRKMKDQHKQFSQIYDLLAVRVIV------------NSIKDCYAVLGAIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
P KDYIA PK N YQSLHTT+I PF EVQIRTEEM +AE G+AAH+
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPAGKPF--------EVQIRTEEMHRVAEYGVAAHW 344
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
+ + GKT + +++W I E Q+E + + EF++
Sbjct: 345 AYK-----------------EGKTNGVKPDKTGNKLNWFKEIVELQDE---SNDAAEFME 384
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
++ DL G RV+VFTP+G++ LPKGA +D AY IHTEIGNK V AKVNG +V + +
Sbjct: 385 SVKGDLFGDRVYVFTPKGDVLELPKGAGPLDMAYSIHTEIGNKTVGAKVNGKIVPLDYQI 444
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
N E+V+I+T + S + WL+ T AR+KI +F +
Sbjct: 445 KNGEIVDILTSTNSTGPS-----RDWLKLVHTNKARNKIKRFFK 483
>gi|315222474|ref|ZP_07864372.1| GTP diphosphokinase [Streptococcus anginosus F0211]
gi|315188442|gb|EFU22159.1| GTP diphosphokinase [Streptococcus anginosus F0211]
Length = 738
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ LV++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVTLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHEVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE ++ KIE + + EI
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|225861474|ref|YP_002742983.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Taiwan19F-14]
gi|417313123|ref|ZP_12099835.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04375]
gi|418094436|ref|ZP_12731563.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49138]
gi|418142159|ref|ZP_12778972.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13455]
gi|418153383|ref|ZP_12790121.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16121]
gi|418157938|ref|ZP_12794654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16833]
gi|418228152|ref|ZP_12854769.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 3063-00]
gi|419438683|ref|ZP_13978751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13499]
gi|419480488|ref|ZP_14020293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19101]
gi|419500190|ref|ZP_14039884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47597]
gi|419502297|ref|ZP_14041981.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47628]
gi|419519357|ref|ZP_14058963.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08825]
gi|419527982|ref|ZP_14067525.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
gi|225728365|gb|ACO24216.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Taiwan19F-14]
gi|327389831|gb|EGE88176.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04375]
gi|353764932|gb|EHD45480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49138]
gi|353806410|gb|EHD86684.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13455]
gi|353816934|gb|EHD97142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16121]
gi|353824386|gb|EHE04560.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16833]
gi|353880547|gb|EHE60362.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 3063-00]
gi|379537090|gb|EHZ02275.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13499]
gi|379566135|gb|EHZ31126.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
gi|379570442|gb|EHZ35406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19101]
gi|379599498|gb|EHZ64281.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47597]
gi|379600510|gb|EHZ65291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47628]
gi|379641194|gb|EIA05732.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08825]
gi|429316493|emb|CCP36199.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034156]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVYFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 307/559 (54%), Gaps = 62/559 (11%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
EDL + + E +L+RRA A+ H GQKR+SG+P+I HPV VA +L EL D +
Sbjct: 35 EDLGDGLRSYTAEEADLLRRAFEFAYCLHKGQKRKSGDPYIAHPVAVASLLRELGGDAVT 94
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+AAGLLHD VEDT V T E +E EFG VR +VEG TK+S+ K E +A+
Sbjct: 95 VAAGLLHDVVEDTEV-TLEALEAEFGPEVRLLVEGVTKLSQFN-FSSKTEQ------QAE 146
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+MF+AM +++RVI+VKLADRLHNMRTL ++PPHKQ IA ET+++FAPLA LG++
Sbjct: 147 NFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLPPHKQKQIAAETMEIFAPLANRLGIWH 206
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
K ELE+L+F Y + E Y +++ V E E E++ + L K +
Sbjct: 207 FKWELEDLAFKYLDYEAYRQIQELVNAKRSEREAEIQAFIEELRKHLIQGGLEHF----- 261
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K Y IY+ + + R +E+ + +R+I++ CY VL +
Sbjct: 262 EISGRPKHLYGIYRKMQQQRKEFHEIYDLLAVRVIVQTV------------SECYRVLAV 309
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH + PIP KDYI PK N YQSLHT +I + EVQIRTEEM +AE GIA
Sbjct: 310 VHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPV---EVQIRTEEMHRVAEYGIA 366
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + G +P R +WL + EWQ + + +E
Sbjct: 367 AHWK-----------YKEAGSTPVKPE--------EERFTWLRQLLEWQNDLKDD---KE 404
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
++DTI +L S V+VFTP+G++ LP+G+ VD+AY IH+EIG+ A+VN +V
Sbjct: 405 YLDTIRENLFESEVYVFTPKGDLLALPQGSCPVDFAYRIHSEIGDHCAGARVNNKIVPLN 464
Query: 612 HVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSAS 666
L N ++V+IIT+ NA S W+ T SAR++I ++ REQ
Sbjct: 465 TRLRNGDIVQIITHKNAHPSLD-------WINFVATSSARNRIRQWFKRCNREQNIARGR 517
Query: 667 EITADTVGDFVADSGEESE 685
++ +G D+ +SE
Sbjct: 518 DLLERELGKTGFDALLKSE 536
>gi|415752850|ref|ZP_11479832.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV36]
gi|381308497|gb|EIC49340.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV36]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVIFVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + +EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQADDD---KEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|317498122|ref|ZP_07956424.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894599|gb|EFV16779.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 765
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 313/551 (56%), Gaps = 69/551 (12%)
Query: 118 SSDAFKEDSPERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPV 176
S D+F PE L L T+ S ++E V RA +A++AH+ QKR+SGEP+IIHP+
Sbjct: 18 SPDSFT--PPEELKRQLITTMQSIYDEEDIEAVERAYKVAYKAHEKQKRKSGEPYIIHPI 75
Query: 177 EVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKL 236
VA IL ELELD E+I AGLLHD VEDT T E I +FG V ++V+G TK+ +L
Sbjct: 76 CVAIILAELELDKETIMAGLLHDVVEDTET-THEDIVRDFGEEVAQLVDGVTKLGQLSYS 134
Query: 237 KCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATET 296
K K E V+A++LR+MFLAM +++RVI++KLADRLHNMRT+ M P KQ + ET
Sbjct: 135 KDKIE------VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRPEKQKEKSRET 188
Query: 297 LQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMK 356
+ ++AP+A LG+ +IK EL++L+ Y + Y ++ + +E E ++E ++
Sbjct: 189 MDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLEHSLDSAKEEREAFIQE----IVD 244
Query: 357 KIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVG 416
+++ +D +K EI K +SIYK ++ +I+++ + +RI +
Sbjct: 245 EVKG--HIDHAGIKAEIDGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKV--------- 293
Query: 417 PLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMF 471
+ CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI PF
Sbjct: 294 ---DTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPF------ 344
Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
E+QIRT EM +AE GIAAH+ + T LN ++S
Sbjct: 345 --EIQIRTFEMHRVAEYGIAAHWKYK----------------ENNNTKGLNKEE--EKLS 384
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYM 589
WL + EWQ + N +EF+ + DL +V+ FTP G++KNL G+T +D+AY
Sbjct: 385 WLREVLEWQRDMDDN---KEFLSLLKTNLDLFAEQVYCFTPNGDVKNLANGSTPIDFAYS 441
Query: 590 IHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSA 649
IH+ +GNKMV A+VNG V + L N + VEIIT S+++ + WL K+ A
Sbjct: 442 IHSAVGNKMVGARVNGRQVPFDYHLQNGDRVEIIT-----SQNSKGPSRDWLGIVKSAQA 496
Query: 650 RHKIMKFLREQ 660
R KI ++ + Q
Sbjct: 497 RSKINQWFKRQ 507
>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 739
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 301/524 (57%), Gaps = 56/524 (10%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I+ PN ++ + RA A AH GQ+R SGEP+I+HP+ VA IL L LD E+I A
Sbjct: 17 IAAYQPNADINKIIRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAF 76
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T E IE FG V +++G V+KLG++ E+ S +DVK ++ R+M
Sbjct: 77 LHDVVEDTQT-TLEEIEAVFGKNVMTLIDG---VTKLGRI----ESMSKEDVKLENYRKM 128
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +M K+ IA ETL+V+APLA LG+ IK+EL
Sbjct: 129 FLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAEL 188
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y E Y + V +E ++ +++A ++KI L+ ++ EI+
Sbjct: 189 EDLCLRYLEPEAYYTLVEEVKQKRRERQEFIQDA----VQKIRAQ--LETAGIEAEIKGR 242
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + SINE+ ++ +R+ L S + CY VLG++H +W
Sbjct: 243 AKHFYSIYRKMKRDNKSINEIYDLSAVRV------------LVSTVKDCYGVLGVIHAMW 290
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP KDYIA PK NGYQSLHTT++ LE+QIRT+ M I+E GIAAH+
Sbjct: 291 KPIPGRFKDYIAMPKSNGYQSLHTTVMT----EGDPLEIQIRTKAMHQISEFGIAAHWKY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G++V + N ++SWL + Q+E+ +EF + +
Sbjct: 347 K----------------EAGRSVGAGDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEAL 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N
Sbjct: 387 KLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKN 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++V I+T A S S WL + + R KI + + +
Sbjct: 447 GDIVSIVTNKASSGPSP-----DWLNTVASSATRGKIRAWFKRE 485
>gi|419508740|ref|ZP_14048391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49542]
gi|379610694|gb|EHZ75424.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49542]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMIELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|194397589|ref|YP_002038260.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
gi|194357256|gb|ACF55704.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERIXKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
ATCC 19397]
gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
Hall]
gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
Length = 723
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 304/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 310/525 (59%), Gaps = 59/525 (11%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
+++E+V++A + + H GQ R SGEP+++HP+EV IL ++ LD +IAAGLLHD+VED
Sbjct: 32 DDIEIVKKAFEFSQKHHAGQTRASGEPYLVHPLEVGIILADMRLDTTAIAAGLLHDSVED 91
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T+V T E I+E+FG V IVEG TK+S++ + S ++ +A+++R+M LAM ++
Sbjct: 92 TSV-TIEEIQEQFGEQVAHIVEGVTKISRI-------DFASREEAQAENVRKMVLAMVDD 143
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RV+++KLADRLHNMRTL H+ +Q IA ETL+++AP+A LGM +++ ELE+L+F Y
Sbjct: 144 IRVVLIKLADRLHNMRTLQHLSQERQEKIARETLEIYAPIAHRLGMGRVRGELEDLAFPY 203
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
+ Y +V+ V K+ E+ LE+ ++ K++++ ++ + S K YSI
Sbjct: 204 VDPIGYKRVEEAVESRRKKGEEFLEQVKGVITAKLKEN------SIDARVDSRIKRLYSI 257
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
+ +++ R + +V + LRII K S V CY +LG++H +W P+P +
Sbjct: 258 NQKLIRQRIDVEQVYDMYALRIITK----SVVD--------CYSILGIIHNLWRPVPGRI 305
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KD+IA P+PN YQSLHTT+I E+ EVQIRTEEM +AE GIAAH+ + G
Sbjct: 306 KDFIAMPRPNFYQSLHTTVIA---ENGNPFEVQIRTEEMHKLAEEGIAAHWK---YKDGP 359
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+ +A R++WL + EWQ + EF+ ++ DL
Sbjct: 360 I------------------SAKDEQRLAWLRQVVEWQRDV---QDPGEFLSSLKIDLYPE 398
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
V+ F+P+G+I LP+ AT +D+AY IHTE+G+ V AKVNG +V + L + ++VEI+
Sbjct: 399 EVYTFSPKGKIVILPRDATPLDFAYTIHTEVGHTCVGAKVNGRIVPLRYKLRSGDIVEIL 458
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
T + + WL K+ +R KI +L A EI
Sbjct: 459 T------QPGHTPSRDWLTIVKSPRSRQKIKHWLNVHQRERAIEI 497
>gi|415750037|ref|ZP_11477981.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
gi|418133094|ref|ZP_12769965.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11304]
gi|353804977|gb|EHD85255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11304]
gi|381318331|gb|EIC59056.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
Length = 740
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+ ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIV-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|116492882|ref|YP_804617.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus pentosaceus ATCC 25745]
gi|421894250|ref|ZP_16324740.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
pentosaceus IE-3]
gi|116103032|gb|ABJ68175.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus pentosaceus ATCC 25745]
gi|385272794|emb|CCG90112.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
pentosaceus IE-3]
Length = 743
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 310/552 (56%), Gaps = 55/552 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ V++A A H Q R+SGEP+I+HP++VA IL L++D E++AAG LHD
Sbjct: 19 YMNEEHAAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT ++T IEE FG V IV+G VSK+ K+K K S Q+ A++ R++ LA
Sbjct: 79 TVEDT-LITLGDIEELFGKDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ I+ ETL+++APLA+ LG+ IK ELE++
Sbjct: 131 MSQDIRVIIVKLADRLHNMRTLQHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + + E+ ++ A L +E DL TEI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRRNQREEYIDSAISELKSAVE-----DLQLKHTEIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ +++ + +R+I + CY VLG +H W PI
Sbjct: 246 IYSIYRKMVDQHKQFSQIYDLLAIRVI------------TVSVRDCYAVLGAIHAKWKPI 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ LE+QIRT+ M +AE G+AAH++ +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEIQIRTQAMHRVAEYGVAAHWA---Y 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G+ K N A +++W I E Q+E + + +F++ + D
Sbjct: 348 KEGI-------------KDELAQNTTDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L G RV+ FTP+G++ LPKGA +D AY+IHTE+GN AKVNG +V + + N ++
Sbjct: 391 LFGDRVYAFTPKGDVYELPKGAGPLDLAYIIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEI+T SK++ + W+ TR R+KI +F R+ E D + +
Sbjct: 451 VEILT-----SKNSAGPSRDWINLVSTRRGRNKIKQFFRQVDHEENVEKGRDILAKQLEQ 505
Query: 680 SGEESEVEDLSD 691
+G +V DL D
Sbjct: 506 TG--YDVSDLMD 515
>gi|418029539|ref|ZP_12668077.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689845|gb|EHE89818.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 753
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 297/520 (57%), Gaps = 56/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTAYQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK +LE++
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 SFHYMNPEAYYKIVYMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ + NE+ + +R+I+ P CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++
Sbjct: 293 PGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA---- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ R N + K AL IS RE E + + EF++ + D
Sbjct: 346 ------YKRGNFQGVDEKE------GGALDIS-----REILELQKDSSDADEFMEAVHSD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +V
Sbjct: 389 IFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDV 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 482
>gi|306490820|gb|ADM94941.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[uncultured candidate division JS1 bacterium]
Length = 724
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 301/522 (57%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +++ +R+A + + +AH QKR SG+P++ HP+ VA IL +L +D +I AGLLH
Sbjct: 19 SYNPDADIDFLRKAYIFSQQAHQNQKRYSGQPYLSHPLGVADILADLNMDIITIVAGLLH 78
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V E IE+ FGA V +V G TK+SK+ K K E A++ R+MFL
Sbjct: 79 DVVEDTQV-NLEEIEQVFGAEVAMLVNGVTKLSKIS-FKTKEERQ------AENFRKMFL 130
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ E++RVI++KLADRL+NMRTL ++P K+ A ETL ++ P+A LG+Y++K ELE+
Sbjct: 131 AIAEDIRVILIKLADRLNNMRTLKYVPAPKRLKKAKETLDIYVPIANRLGLYRVKWELED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ + + Y ++ R+VA E EK +EE K ++++++ +K I+ K
Sbjct: 191 YALLNLDPRKYNELARKVAKSRAEREKYIEEVKKRIVEELQK------FGIKARIQGRPK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + + ++ + +RII C+ CY LGL+H +W P
Sbjct: 245 NIYSIYKKMEEQDKDFFQIYDLMAIRII------------CNSITDCYASLGLLHSLWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I E LEVQIRTEEM AE GIAAH+
Sbjct: 293 MPGRFKDYIAMPKSNMYQSLHTTVITSEGEP---LEVQIRTEEMHRTAEYGIAAHWKY-- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ K L ++ R++WL I +WQ+E + EF++ +
Sbjct: 348 ----------------KEKGDFLKDSKFEERLTWLRQILDWQKELKDPL---EFMENLKI 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DLL V+ FTP+G++K LP G+T VD+AY IHTEIG++ V AKVN +V L + +
Sbjct: 389 DLLQYEVYTFTPKGDVKVLPLGSTPVDFAYAIHTEIGHRCVGAKVNNKIVPLDRELKSGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT SK++ + WL+ KT A+ +I + +++
Sbjct: 449 IVEIIT-----SKTSSGPSRDWLKFVKTSGAKTRIKSWFKKE 485
>gi|134298601|ref|YP_001112097.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum reducens MI-1]
gi|134051301|gb|ABO49272.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum reducens MI-1]
Length = 721
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 201/531 (37%), Positives = 309/531 (58%), Gaps = 57/531 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L+E + + Y ++ +R+A A AH GQKR SGE +I+HP+ +A IL EL+LD
Sbjct: 4 LFELEQKVLLYNPSVDIAFLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDV 63
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++AAGLLHD VEDT + T E IE+ F + +V+G V+KLGKL+ + + ++ +
Sbjct: 64 QTVAAGLLHDVVEDTGI-TLEDIEKNFSLEIATMVDG---VTKLGKLQFQTK----EERQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFLAM +++RVI++KLADRLHN+RTL KQ +A ETL F P+A LG+
Sbjct: 116 AENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLHFFTPMAHRLGI 175
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y+IK ELE+LSF Y E Y ++K ++A + E+ ++E K L K L + +
Sbjct: 176 YKIKWELEDLSFRYLEPEQYQRMKVQIAKSRAKREEYIQEVIKELAAK------LSAVNI 229
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
K+EI+ K YSIY+ +++ + + ++ + +R+ L + + CY L
Sbjct: 230 KSEIQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV------------LVNSVKDCYGSL 277
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+ H +W PIP KDYIA PK N YQSLHTT+I E +E+QIRT +M +AE G
Sbjct: 278 GIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGEP---VEIQIRTWDMHKVAEYG 334
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ R K + +++W+ + + Q E +
Sbjct: 335 IAAHW--------------------RYKEGSQEEKDFDKKLAWIRQMLDAQHE---ARDA 371
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
+EF++ + DL VFVFTP+G++ LP GA +D+AY IHT++G++ V AKVNG +V
Sbjct: 372 KEFMENLKVDLFSQSVFVFTPKGDVMELPAGAVPLDFAYRIHTDVGHRTVGAKVNGRIVP 431
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
HVL N ++EIIT SK + + WL KT A+++I ++ +++
Sbjct: 432 LDHVLKNGNIIEIIT-----SKVSNGPSRDWLSIVKTPQAKNRIRQWFKKE 477
>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
Length = 723
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 304/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEDVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|420143469|ref|ZP_14650966.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
gi|391856340|gb|EIT66880.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
Length = 741
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ LVR+AL A AH Q R SGEP+IIHP++VA IL +L+LD +++AG LH
Sbjct: 18 AYMNEKDILLVRKALQCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN + + +E FG + IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL ++ P KQ I++ET+ ++APLA LG+ IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y N ++ +++ + + E +EE + L ++++D Q V EI K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMKDAQ------VDAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +E+ + +R C L + Y LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTNSTSDVYTTLGYIHDLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G+ ++ I+ ++W+N + E QE+ ++ EFV +
Sbjct: 347 ----------------QGRKAKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+LG +++VFTP G ++ LP G+ +D+AY IHT++G+ AK+N + +VL +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT SK++F + W++ KT AR+KI +F + Q
Sbjct: 449 KVEIIT-----SKTSFGPSRDWIKLVKTNKARNKIKQFFKSQ 485
>gi|422881371|ref|ZP_16927827.1| GTP diphosphokinase [Streptococcus sanguinis SK355]
gi|332364552|gb|EGJ42323.1| GTP diphosphokinase [Streptococcus sanguinis SK355]
Length = 739
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 201/527 (38%), Positives = 307/527 (58%), Gaps = 55/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L T YL+ ++ +++AL+ A + H GQ RRSGEP+I+HP++VA IL L+LD ++A
Sbjct: 13 LALTRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILATLKLDAVTVA 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
G LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++
Sbjct: 73 CGFLHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K
Sbjct: 125 RKMLMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+LSF Y N ++ K+ + + +E E +EE +++KIE + + +I
Sbjct: 185 WELEDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVQKIE--TYAGERNLHGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + + +E+ + +R I+ Q Y +LG +H
Sbjct: 239 YGRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH
Sbjct: 287 ELWRPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V ++ A+ ++W+ + E Q++ + +++FV
Sbjct: 343 WAYKKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNDAKDFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEIIT NA ++F + WL KT AR+KI +F + Q
Sbjct: 443 LRTGDQVEIIT-NA----NSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
29176]
gi|197297192|gb|EDY31755.1| RelA/SpoT family protein [Ruminococcus lactaris ATCC 29176]
Length = 774
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 315/543 (58%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE+L++ L + P+ ++ ++ +A + EAH Q R+SGEP+IIHP+ V IL E
Sbjct: 36 DPEQLYQALIARVRKYHPSADITMIEKAYRIGKEAHKDQVRKSGEPYIIHPLWVGIILAE 95
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT + T + I EFG V +V+G V+KLG+L +
Sbjct: 96 LEMDKETIVAGMLHDVVEDTEM-TLDDITREFGEEVALLVDG---VTKLGQLSYSQDKLE 151
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M KQ A ET+ ++AP+A
Sbjct: 152 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTEAKQKEKARETMDIYAPIA 208
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y E Y ++ V DL + E +I+ E + +
Sbjct: 209 QRLGISKIKTELDDLSLKYYQPEVYYQL---VKDLNARKTEREEFVQQIVA---EVSKHM 262
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++K ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 263 ENASIKAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 310
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PK N YQSLHTTL+ PF E+QIRT
Sbjct: 311 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPF--------EIQIRT 362
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + G + +G LN+ +++WL I EW
Sbjct: 363 EEMHKTAEYGIAAHWK----------YKETGGSNAKG----LNSQE--EKLNWLRQILEW 406
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFQEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
M+ A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 464 MIGARVNGRLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKNKINQWF 518
Query: 658 REQ 660
+ +
Sbjct: 519 KRE 521
>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 764
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 306/531 (57%), Gaps = 63/531 (11%)
Query: 131 WEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W++L YL NEL+L+ A + A H QKR +GEP+++H + VA IL ++ +D
Sbjct: 54 WQELWSKAAKYLDKNELKLLGEAFVYAANKHKNQKRATGEPYVVHVLSVAGILSDVNIDV 113
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E++ A LLHD +EDT+ TFE ++ +FG V +V+G V+KLG + K +V+D +
Sbjct: 114 ETLVAALLHDVIEDTDS-TFEEVKAKFGTNVAVLVDG---VTKLGNIDFK----TVEDYQ 165
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFL M +++RV+++KLADRLHNMRT+ + KQ IA ETL+++APLA LG+
Sbjct: 166 AENLRKMFLVMAKDIRVVLIKLADRLHNMRTIQVLRREKQLRIARETLEIYAPLAHRLGI 225
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
Y +K ELE+L+F + Y +++RRV E E ++EA L KK LD +
Sbjct: 226 YHMKRELEDLAFKVLEPDMYYEIRRRVRKKLPEREAIIKEAIDALSKK------LDEGGI 279
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
+ I K YSIY+ + + +I ++ + LR+I + CY VL
Sbjct: 280 RAFITGRAKHFYSIYEKMKRKNLTIEQMYDLLALRVI------------TNSVVDCYQVL 327
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH IW PIP DYIA PK N YQSLHTT++ E LEVQIRT +M IAE G
Sbjct: 328 GIVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVVGPSGEP---LEVQIRTWDMHWIAEYG 384
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + G +P+ ++ +++W+ + E Q + +
Sbjct: 385 IAAHWRYK------EGQIKPD--------------DLDTKLTWIRQVLETQ---LDSSEP 421
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ + D+L + VFVFTP+G++ +LPKGAT +D+AY IHTEIGNK V A VNG +V
Sbjct: 422 SEFLENLKADVLSTEVFVFTPKGDVISLPKGATPLDFAYNIHTEIGNKCVGAMVNGRIVP 481
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLR 658
++ L N +++ I+T + Q H + WL T AR KI + R
Sbjct: 482 LSYELKNGDIIRILT--------SPQGHPSRDWLSIVNTGRARSKIRAYFR 524
>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
Length = 723
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 304/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEREIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRAG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|357639018|ref|ZP_09136891.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|418417900|ref|ZP_12991092.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
gi|357587472|gb|EHJ56880.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|410869430|gb|EKS17391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
Length = 739
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 316/529 (59%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L T Y++ +++ V++AL A AH Q R+SGEP+IIHP++VA IL +L LD +
Sbjct: 11 EVLDLTKKYMNESDVAFVKKALDYATAAHFYQARKSGEPYIIHPIQVAGILADLHLDAVT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+A G LHD VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A+
Sbjct: 71 VACGFLHDVVEDTDI-TLDDIELDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M +AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +
Sbjct: 123 NHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISR 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+L+F Y N ++ K+ +++ +E E ++E +++KI + + +
Sbjct: 183 IKWELEDLAFRYLNEVEFYKISHLMSEKRREREALVDE----IVEKIT--TYTNEQGLYG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
E+ K YSIY+ + + +++ + +R I+ + S V Y ++G
Sbjct: 237 EVYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIM--ETASDV----------YAMVGY 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H +W P+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+A
Sbjct: 285 IHELWRPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHAVAEYGVA 340
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + + G V N A + ++W+N + E Q+ N +++
Sbjct: 341 AHWAYKKGIKGKV-----------------NQAEQKVGMNWINELVELQD--ASNGDAKD 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
FVD++ ++ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 382 FVDSVKEEIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLT 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L +VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 442 AKLKTGDVVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|307707018|ref|ZP_07643815.1| GTP pyrophosphokinase [Streptococcus mitis SK321]
gi|307617544|gb|EFN96714.1| GTP pyrophosphokinase [Streptococcus mitis SK321]
Length = 740
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVDCHCGQYRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTEA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
Length = 729
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 302/519 (58%), Gaps = 66/519 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
+++ +A A +AH QKR SGEP+IIHPVEVA IL E+ LD +IAA LLHD +EDT+
Sbjct: 19 DIIIKAYNYAKDAHKAQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDY 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T+E +E+EF V +VEG V+KLGK+K K + ++ +++++R+M LAMT+++RV
Sbjct: 79 -TYEDVEKEFNREVANLVEG---VTKLGKIKFKTK----EEQQSENVRKMLLAMTKDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL +M KQ A ETL ++APLA LG+ ++K ELE+L+ Y N
Sbjct: 131 ILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNP 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R+VA+ KE E+ +E L +K LD +K+EI K YSIY+
Sbjct: 191 NEYYDLVRKVAEKRKEREEYIERIIHELKEK------LDEAGIKSEIEGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ +I+++ + +RI L + CY VLG+VH ++ PIP KDY
Sbjct: 245 MVVKNKTIDQIFDLTAVRI------------LVEDVKDCYAVLGMVHTMYKPIPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLH+T+I PF E+QIRT EM +E GIAAH+
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEMHYTSEYGIAAHWK------ 338
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ G++ ++++ +++WL + EWQ E EF++ D+
Sbjct: 339 -----YKEGGKN--------SDSDFEAKLAWLREVLEWQRE---TSNPEEFMEDFKIDMF 382
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G++ NLP +T +D+AY IHT+IG++ + KVNG +V + L E+VE
Sbjct: 383 SDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGKVNGRIVPLDYHLKTGEIVE 442
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++T S WL K+ A+ KI + +++
Sbjct: 443 VLTSPTPKGPSI-----SWLNLTKSNQAKSKIKSWFKKE 476
>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
Length = 739
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 301/524 (57%), Gaps = 56/524 (10%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I+ PN ++ + RA A AH GQ+R SGEP+I+HP+ VA IL L LD E+I A
Sbjct: 17 IAAYQPNADINKIVRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAF 76
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T E IE FG V +++G V+KLG++ E+ S +DVK ++ R+M
Sbjct: 77 LHDVVEDTQT-TLEEIEAVFGKNVMTLIDG---VTKLGRI----ESMSKEDVKLENYRKM 128
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
FLAM +++RVI++KLADRLHNMRTL +M K+ IA ETL+V+APLA LG+ IK+EL
Sbjct: 129 FLAMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAEL 188
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L Y E Y + V +E ++ +++A ++KI L+ ++ EI+
Sbjct: 189 EDLCLRYLEPEAYYTLVEEVKQKRRERQEFIQDA----VQKIRAQ--LEAAGIEAEIKGR 242
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + SINE+ ++ +R+ L S + CY VLG++H +W
Sbjct: 243 AKHFYSIYRKMKRDNKSINEIYDLSAVRV------------LVSTVKDCYGVLGVIHAMW 290
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
PIP KDYIA PK NGYQSLHTT++ LE+QIRT+ M I+E GIAAH+
Sbjct: 291 KPIPGRFKDYIAMPKSNGYQSLHTTVMT----EGDPLEIQIRTKAMHQISEFGIAAHWKY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G++V + N ++SWL + Q+E+ +EF + +
Sbjct: 347 K----------------EAGRSVGAGDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEAL 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N
Sbjct: 387 KLDVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKN 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++V I+T A S S WL + + R KI + + +
Sbjct: 447 GDIVSIVTNKASSGPSP-----DWLNTVASSATRGKIRAWFKRE 485
>gi|304385085|ref|ZP_07367431.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
gi|427439778|ref|ZP_18924342.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
gi|304329279|gb|EFL96499.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
gi|425787910|dbj|GAC45130.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
Length = 745
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 312/560 (55%), Gaps = 57/560 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ V++A A H Q R+SGEP+I+HP++VA IL L++D E++A+G LHD
Sbjct: 21 YMNEEHTAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVASGFLHD 80
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT ++T +EE FG V IV+G VSK+ K+K K S Q+ A++ R++ LA
Sbjct: 81 TVEDT-LITLGDVEELFGHDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 132
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ I+ ETL+++APLA+ LG+ IK ELE++
Sbjct: 133 MSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 192
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L + EE + ++E D DL +I K
Sbjct: 193 ALRYLNPQQYY----RIVHLMNSRRAQREEYINSAIGELE-DAIADLHLKHVDIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ +++ + +R+I + CY VLG +H W PI
Sbjct: 248 IYSIYRKMVDQHKQFSQIYDLLAVRVI------------TDTVRDCYAVLGAIHAKWKPI 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ LE QIRTE M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEFQIRTEAMHRVAEYGVAAHWAYKEG 352
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+T V NA A +++W I E Q+E + + +F++ + D
Sbjct: 353 ITDEVNQ----------------NATDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L G RV+VFTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 393 LFGDRVYVFTPKGDVFELPKGAGPLDLAYTIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 452
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR----EQAALSASEITADTVGD 675
VEI+T SK++ + WL TR +R+KI +F R E+ EI +
Sbjct: 453 VEILT-----SKNSAGPSRDWLTMVSTRRSRNKIKQFFRQANHEENVEKGREILTKQLEQ 507
Query: 676 FVADSGEESEVEDLSDGSKQ 695
D E E E+L+ +KQ
Sbjct: 508 TGYDPSELLEDENLAQVAKQ 527
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 307/538 (57%), Gaps = 58/538 (10%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
K+ S + L E L SY S EL+ VR+A A AH GQ R SGEP+I HP+ VA IL
Sbjct: 6 KDQSIDGLCEKL---ASYCSQEELDEVRQAYEFASRAHAGQVRMSGEPYITHPLAVAYIL 62
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
+L+LD ++ A LLHD VEDT+V T I + FGA V +V+G TK+ ++ + + E
Sbjct: 63 ADLQLDATAVVAALLHDVVEDTSV-TDSNIVQTFGAEVASLVDGVTKLKRI-RFDSREEQ 120
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+A++LR+MF+AM ++RV+I+KLADRLHNMRTL + P Q A ETL++FAP
Sbjct: 121 ------QAENLRKMFMAMARDIRVLIIKLADRLHNMRTLRYQTPATQMRKARETLEIFAP 174
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK ELE++S Y N + Y ++ +A +E E+ +E +L +K+ +
Sbjct: 175 LAHRLGINTIKWELEDISLRYLNPQQYYRIVNLMARKRQEREQFIEGVMDVLRQKLGE-- 232
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ +K E+ K YSIY+ + NE+ + +R+ ++
Sbjct: 233 ----LNLKAEVSGRAKHIYSIYRKMTTQHKEFNEIYDLFAIRVTVESI------------ 276
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY VLG+VH +W P+P KDYIA PK N YQSLHTT+I E LE+QIRT EM
Sbjct: 277 KDCYGVLGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEP---LEIQIRTWEM 333
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
AE GIAAH+ V G R + A +++W + EWQ++
Sbjct: 334 HQTAEYGIAAHW-----VYKESGSRRVED-------------DFAKKLAWFREVLEWQQD 375
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
F ++EF++T+ DL +VFVFTP+G++ LP G+ +D+AY IHT+IGN + AK
Sbjct: 376 F---RDAQEFMETLKIDLFSDQVFVFTPKGDVIELPAGSVPIDFAYRIHTDIGNHCIGAK 432
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG +V + L ++VE+IT SK ++ + WL+ ++ ++ KI ++ + +
Sbjct: 433 VNGKMVPLDYRLRTGDIVEVIT-----SKHSYGPSRDWLKIVQSSQSKSKIRQWFKRE 485
>gi|270291333|ref|ZP_06197555.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
gi|418069368|ref|ZP_12706646.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus acidilactici MA18/5M]
gi|270280179|gb|EFA26015.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
gi|357536837|gb|EHJ20865.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus acidilactici MA18/5M]
Length = 743
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 312/560 (55%), Gaps = 57/560 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ V++A A H Q R+SGEP+I+HP++VA IL L++D E++A+G LHD
Sbjct: 19 YMNEEHTAFVQKACDFASYVHKEQYRQSGEPYIMHPIQVAGILANLKMDPETVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT ++T +EE FG V IV+G VSK+ K+K K S Q+ A++ R++ LA
Sbjct: 79 TVEDT-LITLGDVEELFGHDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ I+ ETL+++APLA+ LG+ IK ELE++
Sbjct: 131 MSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIYAPLAERLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y N + Y R+ L + EE + ++E D DL +I K
Sbjct: 191 ALRYLNPQQYY----RIVHLMNSRRAQREEYINSAIGELE-DAIADLHLKHVDIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ +++ + +R+I + CY VLG +H W PI
Sbjct: 246 IYSIYRKMVDQHKQFSQIYDLLAVRVI------------TDTVRDCYAVLGAIHAKWKPI 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ LE QIRTE M +AE G+AAH++ +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEFQIRTEAMHRVAEYGVAAHWAYKEG 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+T V NA A +++W I E Q+E + + +F++ + D
Sbjct: 351 ITDEVNQ----------------NATDA-KLNWFKEIVELQDE---SNDAADFMEGVKGD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L G RV+VFTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 391 LFGDRVYVFTPKGDVFELPKGAGPLDLAYTIHTEVGNHATGAKVNGKIVPLDYTIKNGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR----EQAALSASEITADTVGD 675
VEI+T SK++ + WL TR +R+KI +F R E+ EI +
Sbjct: 451 VEILT-----SKNSAGPSRDWLTMVSTRRSRNKIKQFFRQANHEENVEKGREILTKQLEQ 505
Query: 676 FVADSGEESEVEDLSDGSKQ 695
D E E E+L+ +KQ
Sbjct: 506 TGYDPSELLEDENLAQVAKQ 525
>gi|335030989|ref|ZP_08524458.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
gi|333770798|gb|EGL47791.1| GTP diphosphokinase [Streptococcus anginosus SK52 = DSM 20563]
Length = 738
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ LV++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVVLVQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E EE ++ KIE + + EI
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREELVDEVVHKIE--TYASERNLHGEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINVVKTSKARNKIRQFFKNQ 484
>gi|418096747|ref|ZP_12733858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16531]
gi|418198472|ref|ZP_12834930.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47778]
gi|421273302|ref|ZP_15724142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR55]
gi|353768468|gb|EHD48992.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16531]
gi|353861582|gb|EHE41517.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47778]
gi|395873733|gb|EJG84823.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR55]
Length = 600
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|111657862|ref|ZP_01408576.1| hypothetical protein SpneT_02000960 [Streptococcus pneumoniae
TIGR4]
Length = 740
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRMIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+ KL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILFKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 209/532 (39%), Positives = 302/532 (56%), Gaps = 56/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L T YL+ E ++ +A + + AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3 RINEILDKTAVYLTEAEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
S+AAGLLHDTVEDT T + IEE FG V IV+G TK+S + S ++
Sbjct: 63 AASVAAGLLHDTVEDTKA-TVDEIEELFGDEVADIVDGVTKISLI-------PFESKEEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM ++RV++VKLADRLHNMRTL P K++ IA ET+ ++APLA LG
Sbjct: 115 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+++IK+ELE+LSF Y + Y+++K V + E +E ++ +I Q +
Sbjct: 175 LHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIER----VIGQIR--QMVGENN 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K I K +S++ + +I++V+ + R++++ + CY V
Sbjct: 229 IKARIIGRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI------------RECYSV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH IW P+P KDYI+ PK N YQSLHTT++ E R+E+QIRT EM+ +AE
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLAEE 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH+ + R G+ N R +WL I +WQ E
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFTWLRQIMDWQREL---KD 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV + DL V+VFTP+GE+K LP+GAT VD A++IHT +G AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGEVKELPEGATAVDLAFLIHTAVGEHCAGAKVNGRLV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N + VEIIT + ++ WL+ KT AR +I F+R +
Sbjct: 433 PLETPLKNGDTVEIIT------DKNRRPNRDWLKFVKTAKARTRIKHFIRTE 478
>gi|456011591|gb|EMF45328.1| GTP pyrophosphokinase [Planococcus halocryophilus Or1]
Length = 727
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 314/533 (58%), Gaps = 55/533 (10%)
Query: 129 RLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
R ED+ + SY++ + ++ +++A +A++AH GQ R+SGEP+I+HPV+VA IL +L++
Sbjct: 7 RTAEDVFEMVASYMNADHVQTIKKAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILADLQM 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D ++AAG LHD VEDT V + E I +F V +V+G TK+SK+ L S ++
Sbjct: 67 DPATVAAGFLHDVVEDTEV-SREDIVHDFDEEVAMLVDGVTKLSKIKYL-------SKEE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+A++ R+MF+AM +++RVI++KLADRLHN+RTL + KQ A ETL++FAP+A L
Sbjct: 119 QQAENHRKMFVAMAQDIRVILIKLADRLHNLRTLKYQTVEKQRIKANETLEIFAPIAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ IK ELE+ + Y N + Y R+ +L K+ E E+ +M ++ LD +
Sbjct: 179 GINTIKWELEDTALRYLNPQQYY----RIVNLMKKKRTEREDYLNKVMGEVRVQ--LDEV 232
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K ++ K YSIY+ + NE+ + +RI ++ + CY
Sbjct: 233 DIKADLFGRPKHIYSIYRKMAIQNKQFNEIYDLLAVRITVESI------------KDCYA 280
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG++H W P+P KDYIA PK N YQSLHTT+I + LEVQIRTEEM IAE
Sbjct: 281 VLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP---LEVQIRTEEMHRIAE 337
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH++ + GK + +++ R+SW I ++Q E +
Sbjct: 338 YGVAAHWAYK-----------------EGKIIDKPKSSVDSRLSWFREILDFQNE---SD 377
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+ EF++++ DL V+VF+P+G++ +P G+ +D+AY +H+EIGNK + AK+NG +
Sbjct: 378 NAEEFMESLKYDLFSDMVYVFSPKGDVIEMPAGSCPIDFAYRVHSEIGNKTIGAKINGKM 437
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V L ++VEI+T SK +F + WL+ AK+ ++KI +F ++Q
Sbjct: 438 VPLDTELHTGDIVEILT-----SKQSFGPSRDWLKIAKSTQTKNKIKQFFKKQ 485
>gi|315924148|ref|ZP_07920374.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622550|gb|EFV02505.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 723
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 297/518 (57%), Gaps = 65/518 (12%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
++ RA LA EAH+GQKR+SGE +IIHPV VA IL E ++D E+I A L+HD +EDT+
Sbjct: 28 MIMRAFQLADEAHEGQKRKSGEEYIIHPVAVAYILAEYKMDTETICAALMHDVIEDTDY- 86
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T ++I F A + +VEG TK+ K+ E S ++ +A+ LR+M +AM+ ++RVI
Sbjct: 87 THKQIATIFNARIADLVEGVTKIGKI-------EYQSKEESQAEYLRKMVMAMSRDIRVI 139
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
++KL DRLHNMRTL +M P KQ A ETL ++AP+A LG+ IK ELE+LS Y + E
Sbjct: 140 LIKLVDRLHNMRTLEYMNPAKQQEKARETLDIYAPIANRLGIQAIKGELEDLSLKYLDPE 199
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y + ++V + E+ +++ IL KI D + +I K YSIY+ +
Sbjct: 200 GYYDLVKKVKARKQVREEYVDQVIVILKAKI------DETGIPCKIYGRSKHFYSIYRKM 253
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+E+ + +R+I+ + CY VLGLVH W PIP KDYI
Sbjct: 254 KAQHRQFDEIYDLIAVRVIV------------DSIKDCYGVLGLVHTEWKPIPGRFKDYI 301
Query: 448 ATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
A PKPN YQS+HTT+I PF EVQIRT+EM +AE GIAAH+
Sbjct: 302 AMPKPNMYQSIHTTVIGPNGDPF--------EVQIRTKEMHRVAEYGIAAHW-------- 345
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ GKT NA+ RI+W+ I EWQ+E + + ++TI DLL
Sbjct: 346 ---------KYKEGKT-GEKNAHYEKRIAWIRQIMEWQQEL---DNAGDLLETIKVDLLN 392
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
V+VF+P+G++ LP G+ +D+AY IH++IG+ V A+VNG +V + L N ++VE+
Sbjct: 393 EEVYVFSPKGQVFELPMGSCPLDFAYRIHSDIGDTCVGARVNGKIVPLNYTLNNGDIVEV 452
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+T SK + + WL K+ AR+KI ++ + +
Sbjct: 453 MT-----SKHSNGPSRDWLSFVKSAHARNKIRQYFKRE 485
>gi|334127724|ref|ZP_08501627.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
gi|333388860|gb|EGK60030.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
Length = 743
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 303/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY + +LE +RRA + A +AH GQ R SG+ +I+HP+ VA IL L LD E+I A LLH
Sbjct: 20 SYQADADLEKIRRAYVYAEKAHSGQVRISGDAYIMHPLNVAYILTSLHLDDETICAALLH 79
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T E +E +FG + +++G V+KLG++ E S +DVK ++ R+MFL
Sbjct: 80 DVVEDT-CATLEEMEAQFGKNIMELIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M K+ IA ETL+V+APLA LG+ IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELED 191
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y E Y + V +E + + E+ + + +K+E + ++ EI+ K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQDFIRESIQQIREKLE------VAGIEAEIKGRAK 245
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S+NE+ ++ +R+++ S + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRVLV------------SSVKDCYGVLGVIHAMWKP 293
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK NGYQSLHTT++ LE+QIRT+ M ++E GIAAH+ +
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTHGDP----LEIQIRTKAMHQVSEFGIAAHWKYK- 348
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+++ + N ++SWL + Q+E+ +EF + +
Sbjct: 349 ---------------EAGRSIGATDEN-DQKMSWLRQMVSLQQEY---DDPKEFFEALKL 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V I+T A + S WL + + R KI + +++
Sbjct: 450 IVSIVTNKASNGPSP-----DWLNTVASSATRGKIRAWFKKE 486
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 209/535 (39%), Positives = 309/535 (57%), Gaps = 62/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L T YLS E L+ +A + + AH GQ R SGEP++ HP+EVA +L ++ LD
Sbjct: 10 RINEILDKTAIYLSEAEQALLTKAYVFSAAAHAGQVRLSGEPYLSHPLEVAGLLADMRLD 69
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
SIAAGLLHDTVEDT T + +EE FG V IV+G TK+S + S ++
Sbjct: 70 AASIAAGLLHDTVEDTKA-TVDEVEELFGDDVADIVDGVTKISLI-------PFESKEEA 121
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM ++RV++VKLADRLHNMRTL P+KQ+ IA ET+ ++APLA LG
Sbjct: 122 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPYKQARIAQETMDIYAPLANRLG 181
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEAN-KILMKKIEDDQFLDLM 367
+++IK+ELE++SF Y + Y ++K V + + L+E+ + ++ +++ + L
Sbjct: 182 LHRIKTELEDISFKYLKPDVYNQIKTGV-----DRHRTLDESYIERVISQVK--ELLRPN 234
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++ I K +S++ + ++++V+ + R+I++ + CY
Sbjct: 235 HIRARIFGRRKHLWSVFNKMRVQGLTLDQVHDLVAFRVIVE------------NIRECYA 282
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLGLVH IW P+P KDYI+ PK N YQSLHTT++ E R+E+QIRT EM+ +AE
Sbjct: 283 VLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLAE 339
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH+ + R G+ N ++ R +WL I +WQ E
Sbjct: 340 EGVAAHWKYK---------EREKGK--------FNPKDVE-RFAWLRQIMDWQREL---K 378
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
SREFV + DL V+VFTP+G++K LP+G T VD A++IHT +G AKVNG L
Sbjct: 379 DSREFVANLRFDLFQDEVYVFTPKGDVKELPEGGTAVDLAFLIHTAVGEHCAGAKVNGKL 438
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 660
V+ L N + VEIIT RH + WL+ KT AR +I F+R +
Sbjct: 439 VTLETPLKNGDTVEIITDK--------NRHPNRDWLKFVKTAKARTRIKHFIRTE 485
>gi|418966746|ref|ZP_13518464.1| RelA/SpoT family protein [Streptococcus mitis SK616]
gi|383346547|gb|EID24579.1| RelA/SpoT family protein [Streptococcus mitis SK616]
Length = 740
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|253317214|ref|ZP_04840427.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 729
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 308/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ ++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQLPKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|76797936|ref|ZP_00780197.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
gi|76586710|gb|EAO63207.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
Length = 485
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 308/522 (59%), Gaps = 55/522 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G
Sbjct: 16 TSQYMSETDVAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTEI-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K ++ + E +E EE I++ KI + + + +I
Sbjct: 188 EDLSFRYLNETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ + S V Y ++G +H +W
Sbjct: 242 PKHIYSIYRKMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G T +N A ++ + W+ + E Q+E + +++FVD++
Sbjct: 346 K-----------------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KEDIFTERIYVFTPNGAVQELPRESGPIDFAYAIHTQVGKKATGAKVNGRMVPLTAKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+VVEIIT + ++F + W++ T AR+KI +F +
Sbjct: 446 GDVVEIIT-----NPNSFGTSRDWIKIVNTNKARNKIRQFFK 482
>gi|169832945|ref|YP_001695030.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Hungary19A-6]
gi|168995447|gb|ACA36059.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Hungary19A-6]
Length = 740
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYVVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEII ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEII-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|331701363|ref|YP_004398322.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus buchneri NRRL
B-30929]
gi|406026925|ref|YP_006725757.1| GTP pyrophosphokinase [Lactobacillus buchneri CD034]
gi|329128706|gb|AEB73259.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus buchneri NRRL
B-30929]
gi|405125414|gb|AFS00175.1| putative GTP pyrophosphokinase [Lactobacillus buchneri CD034]
Length = 742
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/521 (39%), Positives = 303/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ +R+A A AH QKR+SGEP+I HP +VA IL +L +D E+++AG LHD
Sbjct: 18 YMNKEHVDEIRKAYQFAKIAHQYQKRQSGEPYITHPTQVAGILADLHMDPETVSAGFLHD 77
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T I+E FG + IV+G V+KL K+K K S ++ A++ R++ LA
Sbjct: 78 VVEDTGA-TLGDIQELFGHDIALIVDG---VTKLSKIKYK----SSEERLAENHRKLLLA 129
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+IVKLADRLHNMRTL + P KQ IA+ETL+++AP+A LG+ IK ELE++
Sbjct: 130 MCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIASETLEIYAPIADRLGIGTIKWELEDI 189
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + + +E+A K + K I + VK EI K
Sbjct: 190 SLRYLNPQQYYRIVHLMNSRRDQRVDYIEKAIKEVKKAIS------ALGVKAEIYGRPKH 243
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ +++ +++ + +R+I+ + CY VLG +H W P+
Sbjct: 244 IYSVYRKMVEKHKQFSQIYDLLAIRVIV------------DSIKDCYAVLGAIHSEWKPM 291
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 292 PGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRVAEFGIAAHWAYKEG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+T V KT NN +++W I E QE+ + +F+D++ +
Sbjct: 349 ITNGV------------KTSQDNN-----KLNWFKQIIELQED---TDDAADFMDSVKGE 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L G V+VFTP+G++ LPKGA +D AYMIHTE+GN A+VNG +V H + N ++
Sbjct: 389 LFGDHVYVFTPKGDVYELPKGAGPLDMAYMIHTEVGNHTTGARVNGKIVPLDHQVKNGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V+IIT + S + WL+ TR AR+KI ++ R++
Sbjct: 449 VDIITATGSAGPS-----RDWLKLVHTRRARNKIKQYFRQE 484
>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
gi|156864881|gb|EDO58312.1| RelA/SpoT family protein [Clostridium sp. L2-50]
Length = 777
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 308/542 (56%), Gaps = 67/542 (12%)
Query: 127 PERLWEDL-RPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L+++L + ++Y ++ ++ +A +A +AH+GQ R+SGEP+I+HP+ VA IL EL
Sbjct: 46 PEDLYKELIKKILTYHPSTDISMIEKAYKVASKAHEGQLRKSGEPYIMHPLCVAIILAEL 105
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
ELD E+I AG+LHD VEDT V+T E I EF V +VEG V+KL +LK + V
Sbjct: 106 ELDKETIVAGILHDVVEDT-VMTSEEIAAEFSEEVAFLVEG---VTKLTQLKMTTDKIEV 161
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
Q A++LR+MFL+M +++RVI++KLADRLHN+RTL + P KQ A ET+ ++AP+A
Sbjct: 162 Q---AENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQSPAKQVEKARETMDIYAPIAH 218
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QF 363
LG+ +IK EL++LS Y E Y + ++ + HE+E +K+I D +
Sbjct: 219 RLGISKIKVELDDLSMKYLMPEVYKDLTAQID--ARMHEREA------YIKRIVADVKKH 270
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+D + EI K +SIYK + +++++ I +RI ++ +
Sbjct: 271 IDNAHLDAEIDGRVKHLFSIYKKMKNQNKTLDQIYDIFAVRIKVE------------TVR 318
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIR
Sbjct: 319 DCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPF--------EIQIR 370
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + +TG V ++SWL I E
Sbjct: 371 TFEMHRTAEYGIAAHWKYKENITGTVMQKEEE------------------KLSWLRQILE 412
Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
WQ + N FV T DL +V+ FTP G++KNLP G+T +D+AY IHT +GNKM
Sbjct: 413 WQRDTSDNKEFMNFVKT-DLDLFAEQVYCFTPAGDVKNLPSGSTPIDFAYAIHTAVGNKM 471
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V A++NG V L N + VEIIT S+++ + WL K+ A+ KI ++ +
Sbjct: 472 VGARINGRQVPIDTKLNNGDRVEIIT-----SQNSAGPSRDWLNIVKSAQAKTKINQWFK 526
Query: 659 EQ 660
Q
Sbjct: 527 HQ 528
>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
15579]
gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
Length = 723
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 303/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I S E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKDSFSEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIVSNLQ------QNLKKAG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEAVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
Length = 770
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 315/544 (57%), Gaps = 66/544 (12%)
Query: 125 DSPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+SP+ L++ L + P +++ ++ +A +A AH GQ R+SGEP+IIHP+ VA IL
Sbjct: 27 ESPKVLYQRLINKVKEYHPSDDISMIEKAYNIANNAHKGQLRKSGEPYIIHPLCVALILA 86
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LELD E+I GLLHD VEDT ++T E I EF A + IV G TK+ +L K K E
Sbjct: 87 DLELDKETIVGGLLHDVVEDT-IMTEEDITREFSAEIALIVSGVTKLGQLSYSKDKVE-- 143
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+
Sbjct: 144 ----IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPAKQKEKARETMDIYAPI 199
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A+ LG+ +IK EL++LS Y E Y + R++ +L + + +A +++++ Q
Sbjct: 200 AQRLGISKIKIELDDLSLRYLEPEVYYDLARQI-NLKRSERQAFVDA---IVEEVS--QH 253
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ +K ++ K +SIYK ++ +++E+ + +RII+ +
Sbjct: 254 MAQSGIKAQVNGRVKHFFSIYKKMVNQDKTLDEIYDLFAVRIIV------------DTVK 301
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QIR
Sbjct: 302 DCYAALGIIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPF--------EIQIR 353
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T +M AE GIAAH+ + P K V + +++WL I E
Sbjct: 354 TFDMHRTAEYGIAAHWKYK--------------EDPNAKNV---EDSEEAKLTWLRQILE 396
Query: 539 WQEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N +EF+ + D L V+ FTP G++KNLP G+T +D+AY IH+ +GN
Sbjct: 397 WQTDMSDN---KEFMSLLKNDLNLFADSVYCFTPAGDVKNLPTGSTPIDFAYSIHSAVGN 453
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KMV A+VNG LV+ +V+ N + VE++T S ++ + WL K+ A++KI ++
Sbjct: 454 KMVGARVNGKLVNIDYVIKNGDRVEVLT-----SANSKGPSRDWLNIVKSTQAKNKINQW 508
Query: 657 LREQ 660
+ +
Sbjct: 509 FKTE 512
>gi|347520664|ref|YP_004778235.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
gi|385832027|ref|YP_005869802.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
gi|343179232|dbj|BAK57571.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
gi|343181180|dbj|BAK59518.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
Length = 741
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 306/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ LVR+AL A AH Q R SGEP+IIHP++VA IL +L+LD +++AG LH
Sbjct: 18 AYMNEKDILLVRKALQCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAATVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN + + +E FG + IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL ++ P KQ I++ET+ ++APLA LG+ IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y N ++ +++ + + E +EE + L ++++D Q V EI K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMKDAQ------VDAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +E+ + +R C L + Y LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTNSTSDVYTTLGYIHDLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G+ ++ I+ ++W+N + E QE+ ++ EFV +
Sbjct: 347 ----------------QGRKSKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+LG +++VFTP G ++ LP G+ +D+AY IHT++G+ AK+N + +VL +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT SK++F + W++ KT AR+KI +F + Q
Sbjct: 449 KVEIIT-----SKTSFGPSRDWIKLVKTNKARNKIKQFFKSQ 485
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 310/530 (58%), Gaps = 57/530 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
EDL + Y+ +++ V+RA A H GQ RRSGEP+I+HPV+VA IL ++ LD
Sbjct: 10 EDLLDALGEYMGDDDIAEVKRAYEYAKLHHTGQFRRSGEPYILHPVQVAGILVDIGLDAT 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+I LLHD VEDT++ + +++ ++FG V +V+G V+KLGK+K K++ + A
Sbjct: 70 TIIGALLHDVVEDTDI-SLQQLTDDFGPDVAMLVDG---VTKLGKIKYKSKKEEL----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++ R+M +AM E+VRVI++KLADRLHNMRTL HMP KQ A ETL++FAPLA +G+
Sbjct: 122 ENHRKMIIAMAEDVRVILIKLADRLHNMRTLQHMPKEKQVQKAEETLEIFAPLAHRMGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE++S Y N + Y K + + K+ E E ++ ++ + L+ + +
Sbjct: 182 TIKWELEDISLRYINPQQYYK----IVSMMKQKRTEREALVTSVITEV--NGVLEEVHID 235
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
++ K YSIY ++K + NE+ + +RII+ + CY VLG
Sbjct: 236 ADVNGRPKHIYSIYNKMVKHKKEFNEIYDLMAVRIIV------------DSIRDCYAVLG 283
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
++H + P+P KDYIA PKPN YQSLHTT+I E LEVQIRT++M IAE GI
Sbjct: 284 IIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTKDMHFIAEFGI 340
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GK V N + +I+ L I E Q++ +
Sbjct: 341 AAHWAYK-----------------EGKNVSTNGFD--EKIAHLREILELQKD---TTDAE 378
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF++++ D ++VFTP+G++ LPKG+ +DYAY IHTEIG++M AKVNG +V
Sbjct: 379 EFMESLKVDFFSDMLYVFTPKGDVFELPKGSVPIDYAYRIHTEIGHRMTGAKVNGRMVPL 438
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L +++EIIT SK ++ K WL+ A + A++KI ++ + Q
Sbjct: 439 DYKLETGDIIEIIT-----SKHSYGPSKDWLKLAVSSQAKNKIRQWFKRQ 483
>gi|55820243|ref|YP_138685.1| (p)ppGpp synthetase [Streptococcus thermophilus LMG 18311]
gi|55736228|gb|AAV59870.1| (p)ppGpp synthetase [Streptococcus thermophilus LMG 18311]
Length = 739
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 310/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL EL LD ++A G LH
Sbjct: 18 SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILAELHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVYKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ N ++EFVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKEFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT NA S F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-NAHS----FGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
Okra]
gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
Length = 723
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 304/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+L+F Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLAFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNLQ------QNLKRSG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEGVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|359687928|ref|ZP_09257929.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750353|ref|ZP_13306639.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
gi|418758451|ref|ZP_13314633.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384114353|gb|EIE00616.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404272956|gb|EJZ40276.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
Length = 677
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 313/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ E L E +R T + P LEL+ +A ++ ++H GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKEMLLEGVRET---MGPEALELIEKAYKVSEDSHQGQFRLSGEPYIVHPLQVGFILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I+AG+LHD +EDT T E + +FG + ++VEG TK+S++ ++ S
Sbjct: 66 GLDEKVISAGILHDVIEDTKY-TKEDMVRDFGTEITQLVEGVTKISQI-------KSQSK 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS PP KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y +KSELE+L+F E+Y +K+R++ E E +E+ IL +++ + Q
Sbjct: 178 RLGIYSVKSELEDLAFQVIFPEEYQDIKKRISAKKSEREDYIEKLQLILKQRLAEIQ--- 234
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + K +SIY+ + + +E+ + +RI+ + C
Sbjct: 235 ---INANVEGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIV------------TDEIKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W+P+P KDYIATPK N YQSLHTT+I LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWSPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + G N R L + WL ++ WQ+
Sbjct: 337 AEFGIAAHWVYK------EGKTHANERH--------------LTVKWLEVLQTWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
++ +EF++ + DL VFVFTP+GEI LPKGATV+D+A+ IHT++G AK+NG
Sbjct: 374 SLDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKING 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + VE++ + S S WL KT SAR K+ + R
Sbjct: 434 RMIPLRTELRSGDQVEVVV-DKRSKPSPI-----WLRIVKTPSARQKLRAYFRKLREETS 487
Query: 659 ---EQAALSASEIT 669
EQ A SA+E+T
Sbjct: 488 KDLEQGAESAAELT 501
>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
ATCC 51142]
gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
(ppGpp)ase [Cyanothece sp. ATCC 51142]
gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
Length = 744
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 294/515 (57%), Gaps = 59/515 (11%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S +L+L+ RA A++ H+GQ R+SGEP+I HPV VA IL +L D IAAG LHD V
Sbjct: 32 SNQDLDLICRAFNFAYKLHEGQTRKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVV 91
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT+V T E IEE FG V +VEG TK+SK K E +A++ R+MFLAM
Sbjct: 92 EDTDV-TVEEIEEMFGQEVALLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMA 143
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
++RVI+VKLADRLHNMRTL + P KQ IA ET ++FAPLA LG++++K ELE+LSF
Sbjct: 144 RDIRVIVVKLADRLHNMRTLEPLRPEKQKRIARETKEIFAPLANRLGIWRVKWELEDLSF 203
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEP 380
Y EDY +++ V++ + E +E IL K+++D M ++ E++ K
Sbjct: 204 KYLEPEDYREIQNFVSEKRIDRETRIETVKNILQKRLDD------MGIQVLELQGRPKHL 257
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
Y IY + + +E+ +A LRII+K + CY L +VH ++ P+P
Sbjct: 258 YGIYFKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRALAVVHDVFKPMP 305
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+ +
Sbjct: 306 GRFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--E 360
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
TG H + +N + +WL + +WQ++ +E+V+ + +L
Sbjct: 361 TGGSNHT--------------HFSNEDEKFTWLRQLLDWQKDL---KDDQEYVENLKDNL 403
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTP G++ L +GAT VD+AY IHTE+GN M A++NG L N ++V
Sbjct: 404 FDDDVYVFTPDGDVIALSRGATAVDFAYRIHTEVGNHMKGARINGKWSVLDQPLHNGDIV 463
Query: 621 EIIT----------YNALSSKSAFQRHKQWLEHAK 645
EIIT N + + +A R +QW + ++
Sbjct: 464 EIITQKNCHPSLDWLNFVVTPTARNRIRQWFKRSR 498
>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
Length = 751
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 304/544 (55%), Gaps = 56/544 (10%)
Query: 118 SSDAFKEDSPERLWEDLRPTISYLS---PNELELVRRALMLAFEAHDGQKRRSGEPFIIH 174
++ F D PE L E + T + + P+++ L+ RA A++ H+GQ R SGEP+I H
Sbjct: 6 TTSRFNFDVPEWLQECILATSAAANEPVPDDINLISRAFEFAYKLHEGQLRASGEPYIAH 65
Query: 175 PVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG 234
PV VA +L +L IAAG LHD VEDT+V T E IE FG VRR+VEG TK+SK
Sbjct: 66 PVAVAGLLRDLGGSSVMIAAGFLHDVVEDTDV-TPEEIESRFGVEVRRLVEGVTKLSKF- 123
Query: 235 KLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT 294
K E +A++ R+MFLAM ++RVI+VKLADRLHNMRTL H+ P KQ SI+
Sbjct: 124 NFSSKTER------QAENFRRMFLAMAADIRVIVVKLADRLHNMRTLEHLNPQKQRSISQ 177
Query: 295 ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 354
ET ++FAPLA LG+ ++K ELE+L+F Y E Y ++++ VA+ + E L + IL
Sbjct: 178 ETREIFAPLANRLGIGRVKWELEDLAFKYLEPESYRQMQQLVAERRTDRETRLSKVGDIL 237
Query: 355 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSG 414
+++E + L EI K Y IY+ + + + +E+ +A +R+I++ K
Sbjct: 238 RERLESTEIHCL-----EISGRPKHLYGIYQKMQRQQKGFHEIYDLAAMRLILQTK---- 288
Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
+ CY L +VH + PIP KDYI PKPN YQSLHT + + S +E
Sbjct: 289 --------EDCYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGV---MGPSGRPIE 337
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
VQIRT EM IAE GIAAH+ + +G S + + + +WL
Sbjct: 338 VQIRTLEMHHIAEYGIAAHWK-----------YKESGGSSNNRISAEDE-----KFTWLR 381
Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
+ EWQ + ++E++DTI +L V+VFTP G++ L +GAT VD+AY IH+E+
Sbjct: 382 QLLEWQNDL---KDAQEYMDTIKDNLFDDDVYVFTPNGDVIPLSRGATPVDFAYRIHSEV 438
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIM 654
GN A+VNG L N ++VEIIT K WL T SAR++I
Sbjct: 439 GNHCAGARVNGRWTVLDTPLNNGDIVEIIT------KENSHPSLDWLNFVATPSARNRIR 492
Query: 655 KFLR 658
++ +
Sbjct: 493 QWYK 496
>gi|418977993|ref|ZP_13525798.1| RelA/SpoT family protein [Streptococcus mitis SK575]
gi|383348757|gb|EID26714.1| RelA/SpoT family protein [Streptococcus mitis SK575]
Length = 740
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ ++ +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDHHLRGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|410595250|ref|YP_006951977.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
gi|410518889|gb|AFV73033.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
Length = 715
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 313/536 (58%), Gaps = 55/536 (10%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G LHD VEDT
Sbjct: 2 LLFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGFLHDVVEDTE 61
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
+ T + IE +FG VR I++G V+KLGK++ K+ + A++ R+M +AM++++R
Sbjct: 62 I-TLDEIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKMLMAMSKDIR 113
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+LSF Y N
Sbjct: 114 VILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLSFRYLN 173
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++ K ++ + E +E EE I++ KI + + + +I K YSIY+
Sbjct: 174 ETEFYK----ISHMMSEKRREREELVDIIVDKIR--SYTEEQGLYGDIYGRPKHIYSIYR 227
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + +++ + +R I+ + S V Y ++G +H +W P+P KD
Sbjct: 228 KMRDKKKRFDQIYDLIAIRCIM--ETASDV----------YAMVGYIHELWRPMPGRFKD 275
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 276 YIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEFGVAAHWAYK-------- 323
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
+G T +N A ++ + W+ + E Q+E + +++FVD++ D+ R+
Sbjct: 324 ---------KGITSKVNQAEQSVGMGWIQELVELQDE---SKDAKDFVDSVKEDIFTERI 371
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
+VFTP G ++ LP+ + +D+AY IHT++G K AKVNG +V T L +VVEIIT
Sbjct: 372 YVFTPNGAVQELPRESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDVVEIIT- 430
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSG 681
+ ++F + W++ KT AR+KI +F + Q ++ + + D+ + G
Sbjct: 431 ----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQDKETSINKGRELLVDYFQEQG 482
>gi|288574632|ref|ZP_06392989.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570373|gb|EFC91930.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 753
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 318/541 (58%), Gaps = 66/541 (12%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W++L +S YLS EL + AL+ A EAH QKR +GEP+IIH V VA IL ++++D
Sbjct: 38 WQELWSKVSHYLSKEELMELGEALIFAAEAHGEQKRGTGEPYIIHCVYVASILADMKMDV 97
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+++ A LLHD +EDT VVT E + E FG V +V+G V+KLGKL K S +D +
Sbjct: 98 KTMEAALLHDCIEDT-VVTKEALAERFGEEVGVLVDG---VTKLGKLPFK----SFEDYQ 149
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFL M +++RV+++KLADR HNMRTL + KQ IA ETL+++APLA LG+
Sbjct: 150 AENLRKMFLVMAKDIRVVLIKLADRTHNMRTLGALRKDKQQRIAKETLEIYAPLAHRLGI 209
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
YQ+K LE+L+F Y + Y ++K++V E E +++A +L +K+ + Q +D +
Sbjct: 210 YQVKRTLEDLAFKYYDPNMYYEIKKKVQKRLPEREATIKKAIDVLEEKL-NSQGIDAL-- 266
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
I+ K YSI + + + S++++ + +RII+ CY VL
Sbjct: 267 ---IKGRAKHFYSILEKMNRKGLSVDQLYDLLAMRIIVDDITT------------CYTVL 311
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH IW PIP DYIA PK N YQSLHTT++ E LEVQIRT EM +AE G
Sbjct: 312 GIVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVVGPSGEP---LEVQIRTWEMHWLAEYG 368
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV-GNMT 548
+AAH+ R G A ++ L+A EW + + G
Sbjct: 369 VAAHW-----------------RYKEG----------ADKMDDLDAKLEWIRKAIEGGQE 401
Query: 549 SR--EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
+R EF++ + D+L S VFVFTP+G++K+LP+G+T VD+AY +HT++GN+ V A VN
Sbjct: 402 TRPDEFMERLKDDVLTSDVFVFTPQGDVKSLPRGSTPVDFAYAVHTQVGNQYVGAMVNNR 461
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSAS 666
+V + L N ++V+++T S + + WL+ AK+ A+ KI + + +++ +
Sbjct: 462 IVPTDYELQNGDIVKVLT------SSQGKPSRDWLKVAKSSKAKSKIRTYFKHLDSIAKA 515
Query: 667 E 667
E
Sbjct: 516 E 516
>gi|227871732|ref|ZP_03990140.1| GTP diphosphokinase, partial [Oribacterium sinus F0268]
gi|227842420|gb|EEJ52642.1| GTP diphosphokinase [Oribacterium sinus F0268]
Length = 708
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 324/563 (57%), Gaps = 65/563 (11%)
Query: 127 PERLWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L + L + SY ++L ++ +A +A E H QKR+SGEP+IIHP+ VA IL +L
Sbjct: 19 PEELLKILLANVRSYHPSDDLSMIEKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILSDL 78
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
E+D E+IAAGLLHD VEDT + + +++EE F V +V+G TK+++L N N
Sbjct: 79 EMDKETIAAGLLHDVVEDTGM-SLKQVEEMFNPDVAVLVDGVTKLTQL------NLNTDK 131
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+++A++LR+MF++M +++RVII+KLADRLHN+RTL + P K+ A E+L++++PLA
Sbjct: 132 VELQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 191
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +IK E+++LS Y E Y + +V +K +E E +KI+ E + ++
Sbjct: 192 RLGISKIKIEMDDLSLKYLEPEVYYDLAEKVH--FKREVRE-ERIDKIVQ---EVREHIE 245
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ I+ K +SIYK ++ +I+++ + +RII+ + C
Sbjct: 246 ESGIRANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIV------------DTVKDC 293
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
Y VLG +H ++TPIP KDYIA PKPN YQSLHTT+I PF E+QIRT
Sbjct: 294 YAVLGFIHKLYTPIPGRFKDYIAMPKPNMYQSLHTTVIGKDGVPF--------EIQIRTF 345
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
EM AE GIAAH+ + G S T N ++ WL+ I EWQ
Sbjct: 346 EMHRTAEFGIAAHWK-----------YKEEGGSENKAT-----ENEMTKMKWLSEILEWQ 389
Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
++ S+EF+ + D L V+ FTP G++KNLP G+T +D+AY IH+ +GNKM
Sbjct: 390 KD---ESDSKEFMKMVKSDLSLFNESVYCFTPTGDVKNLPAGSTPIDFAYSIHSAVGNKM 446
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V AKVN LV +VL N + V+IIT S+++ + WL+ K+ A++KI ++ R
Sbjct: 447 VGAKVNDKLVPIEYVLHNGDRVDIIT-----SQNSRGPSRDWLKIVKSTQAKNKINQWFR 501
Query: 659 EQAALSASEITADTVGDFVADSG 681
+ + D + +V G
Sbjct: 502 HEQKDENIDRGKDLLERYVKSKG 524
>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
Length = 744
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 300/534 (56%), Gaps = 57/534 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L+L+ RA A++ H+GQ R+SGEP+I HPV VA IL +L D IAAG LHD VEDT
Sbjct: 35 DLDLICRAFNFAYKLHEGQARKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDT 94
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T E IEE FG V +VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 95 DV-TVEEIEEMFGHEVALLVEGVTKLSKFN-FSNKTEQ------QAENFRRMFLAMAKDI 146
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL + P KQ IA ET ++FAPLA LG++++K ELE+LSF Y
Sbjct: 147 RVIVVKLADRLHNMRTLEPLRPEKQRRIARETKEIFAPLANRLGIWRVKWELEDLSFKYL 206
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
EDY +++ +++ + E +E L K++ DD + ++ E++ K Y IY
Sbjct: 207 EPEDYREIQNLISEKRIDRETRIETVKNTLQKRL-DDMGISIL----ELQGRPKHLYGIY 261
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + +E+ +A LRII+K + CY L +VH ++ P+P K
Sbjct: 262 FKMQRQNKGFHEIYDLAALRIIVK------------TNEECYRALAVVHDVFKPMPGRFK 309
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+ + TG
Sbjct: 310 DYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWKYK--ETGGS 364
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
H + +N + +WL + +WQ + +E+VD + +L
Sbjct: 365 NHT--------------HFSNEDEKFTWLRQLLDWQNDL---KDDQEYVDNLKDNLFDDD 407
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP G++ +L +GAT VD+AY IHTE+GN M A++NG L N ++VEIIT
Sbjct: 408 VYVFTPNGDVISLSRGATAVDFAYRIHTEVGNHMKGARINGKWSVLDQPLHNGDIVEIIT 467
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
+ WL T +AR++I ++ RE+ E+ +G
Sbjct: 468 ------QKNCHPSLDWLNFVVTPTARNRIRQWFKRSRREENMARGKELLEKELG 515
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 319/567 (56%), Gaps = 66/567 (11%)
Query: 127 PERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELE 186
P+ L E L S +L L+ RA A+E H GQ R+SGEP+I HPV VA +L +L
Sbjct: 21 PQWLTECLLTYQSSQEQEDLSLICRAFNFAYELHRGQYRKSGEPYIAHPVAVAGLLRDLG 80
Query: 187 LDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQ 246
D IAAG LHD VEDT V T E IEE FG VR++VEG TK+SK K E
Sbjct: 81 GDSTMIAAGFLHDVVEDTEV-TLEEIEERFGLEVRQLVEGVTKLSKFN-FSSKTER---- 134
Query: 247 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKL 306
+A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA
Sbjct: 135 --QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQCRIALETREIFAPLANR 192
Query: 307 LGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDL 366
LG+ + K ELE+L F Y E Y +++ VA+ + E +++ ++ L +++
Sbjct: 193 LGIGRFKWELEDLCFKYLEPEAYREIQTLVAEKRVDRETRIDKISETLRERLYQ------ 246
Query: 367 MTVKT-EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ VK EI+ K Y IY + + +E+ IA LRI+++ K + C
Sbjct: 247 IGVKVLEIQGRPKHLYGIYDKMQRQHKEFHEIYDIAALRILVETK------------EEC 294
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y L +VH ++ PIP KDYI PKPN YQSLHTT++ + LEVQIRT EM I
Sbjct: 295 YRALAIVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVVGL---NCRPLEVQIRTLEMHHI 351
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + TG G T + + + + +WL + EWQ +
Sbjct: 352 AEYGIAAHWKYK--ETG-------------GSTYNITSED--EKFTWLRQLIEWQNDL-- 392
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
++E+++++ +L V+VFTP+G++ L +GAT VD+AY IHTE+G+ M A++NG
Sbjct: 393 -KDAQEYIESLKDNLFEDDVYVFTPQGDVIALARGATAVDFAYRIHTEVGHHMKGARING 451
Query: 606 N---LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----R 658
L +P H N ++VEIIT SK++ WL T SARH+I ++ R
Sbjct: 452 RWSVLDTPLH---NGDIVEIIT-----SKNS-HPSLDWLNFVVTPSARHRIRQWFKRSRR 502
Query: 659 EQAALSASEITADTVGDFVADSGEESE 685
E+ L ++ +G D+ +SE
Sbjct: 503 EENILRGRDLLEKELGKTGFDALLKSE 529
>gi|310829081|ref|YP_003961438.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
gi|308740815|gb|ADO38475.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
Length = 725
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 303/521 (58%), Gaps = 63/521 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ EL+ +A LA AH QKR SGE +IIHPV VA IL E ++D E+I A +LHD +EDT
Sbjct: 25 DTELILKAYHLADGAHKDQKRLSGEAYIIHPVSVAYILAEYKMDTETIVAAILHDVIEDT 84
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ T++ I+E F V +VEG TK+ K+ E S ++ +A++LR+M LAM++++
Sbjct: 85 SY-TYDDIKEMFNEQVADLVEGVTKIGKI-------EYQSKEESQAENLRKMVLAMSKDI 136
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KL DRLHNMRTL +M KQ + ETL ++AP+A LG+ IK+ELE+L+ Y
Sbjct: 137 RVILIKLVDRLHNMRTLEYMKESKQIEKSRETLDIYAPIANRLGIQTIKAELEDLALKYL 196
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ + Y + ++V + E+ + + KIL KKI D + ++ +I K YSIY
Sbjct: 197 DPDGYYDLVKKVKMKKQSREEYINKVIKILEKKI------DEVGIEAKIYGRSKHFYSIY 250
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + +E+ + +R+I+ + CY VLG+VH W PIP K
Sbjct: 251 RKMKAQNRNFDEIYDLIAVRVIV------------DSVKDCYGVLGIVHTQWKPIPGRFK 298
Query: 445 DYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
DYIA PKPN YQS+HTT+I PF E+QIRT+EM AE GIAAH+ +
Sbjct: 299 DYIAMPKPNMYQSIHTTVIGPNGDPF--------EIQIRTKEMHETAEYGIAAHWKYKEG 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+T N + R + ++SWL I EWQ+E + + V+TI D
Sbjct: 351 ITD------SNNKELRYEN----------KMSWLRQILEWQKEL---DNANDLVETIKVD 391
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
LL V+VFTP+G++ LP G+ +D+AY IH+++GN V AKVNG +V + L N ++
Sbjct: 392 LLNEEVYVFTPQGKVVELPMGSCPLDFAYRIHSDVGNSCVGAKVNGKIVPLNYTLNNGDI 451
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T SK++ + WL K+ AR+KI ++ +++
Sbjct: 452 VEIMT-----SKNSNGPSRDWLNFTKSAHARNKIRQYFKKE 487
>gi|222152432|ref|YP_002561607.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
gi|222113243|emb|CAR40752.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
Length = 739
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 307/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY++ ++ V++AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 SYMNKKDIAFVKKALDYATTAHFYQARKSGEPYIIHPIQVAGILADLHLDATTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + + + IE EF VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEI-SLDDIEAEFDKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K+ + + +E E ++E I+ K + + + + ++ K
Sbjct: 190 LAFRYLNESEFYKISHMMREKRREREALVDE---IVAKIV---TYTNEQGLYGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
V G V N + + ++W+ + E Q+ N +++FVD++
Sbjct: 348 GVKGKV-----------------NQTDQKVGMNWIKDLVELQD--ASNGDAKDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGKMVPLTSKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKIVKTNKARNKIRQFFKNQ 485
>gi|418994361|ref|ZP_13541996.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
gi|377744158|gb|EHT68136.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
Length = 729
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 308/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL M KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMLREKQIRISRETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 183 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 485
>gi|385815572|ref|YP_005851963.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125609|gb|ADY84939.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 738
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 297/519 (57%), Gaps = 56/519 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
++ ++L V A A AH+GQ R SG+P+I+HP++VA L L LD +++AAG LHDT
Sbjct: 5 ITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPIQVAGTLANLGLDPDTVAAGFLHDT 64
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VEDT+V T + I+E+FGA V IV+G TK++K E S ++ A++ R+M +AM
Sbjct: 65 VEDTSV-TNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIAM 116
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
+++RVI+VKLADRLHNM TL H+ P KQ IA ETL ++APLA LG+ IK +LE++S
Sbjct: 117 AKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMS 176
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 177 FHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPKHI 230
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
YSIYK ++ + NE+ + +R+I+ P CY VLG VH W P+P
Sbjct: 231 YSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKPMP 278
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++
Sbjct: 279 GRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA----- 330
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ R N + K AL I RE E + + EF++ + D+
Sbjct: 331 -----YKRGNFQGVDEKEGG------ALDIG-----REILELQKDSSDADEFMEAVHSDI 374
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
+V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +VV
Sbjct: 375 FADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDVV 434
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+I+T +S + + W E KT A++KI ++ R+
Sbjct: 435 DILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 467
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 294/518 (56%), Gaps = 67/518 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V++A A EAH QKR SGEP+I+HPVEVA IL E+ +D +I AGLLHD VEDT
Sbjct: 26 KMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEF 85
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
+ E + EF V +VEG V+KLGK++ K + ++ +AD++R+M LAM++++RV
Sbjct: 86 -SREDVSREFSVEVANLVEG---VTKLGKIEYKTK----EEQQADNVRKMLLAMSDDIRV 137
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL +P KQ A ET ++APLA LGM +IK ELE+L+F Y N
Sbjct: 138 ILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQ 197
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R++++ E EK +E+ ++KK+ ++ + + T+I K YSIY+
Sbjct: 198 NEYYFIVRKISEKRVEREKYIEQ----IIKKLREN--MQKAGINTDIEGRPKHFYSIYRK 251
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++K +I+++ + +RI L S + CY LG+ H I+ P+P KDY
Sbjct: 252 MVKKNKTIDQIFDLTAVRI------------LVSTMKDCYAALGIAHTIYKPVPGRFKDY 299
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PK N YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 300 IAMPKANMYQSLHTTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHW------- 344
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ K +I +++WL + EWQ E + EF++ DL
Sbjct: 345 -------------KYKEGADTAEDIDKKLTWLREMLEWQRE---TSDAEEFMERFKIDLF 388
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G + NLP AT +D+AY IHT+IGN V AKV+G +V + L E+VE
Sbjct: 389 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNSCVGAKVSGKMVPLDYHLKTGEIVE 448
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ N S WL K+ A+ KI + ++
Sbjct: 449 VFVSNTPKGPSI-----DWLNIVKSNQAKSKIRSWFKK 481
>gi|291549196|emb|CBL25458.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus torques L2-14]
Length = 773
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 313/543 (57%), Gaps = 65/543 (11%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE L++ L + P+ ++ ++ +A + EAH Q R+SGEP+IIHP+ VA IL +
Sbjct: 36 DPEELYQALIARVRKYHPSADITMIEKAYQIGKEAHKNQFRKSGEPYIIHPLWVAIILAD 95
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT +T + I EFG V +V+G V+KLG+L N +
Sbjct: 96 LEMDKETIVAGMLHDVVEDT-TMTLDEISAEFGEEVALLVDG---VTKLGQL---NYSQD 148
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+ +A++LR+MFLAM +++RVIIVKLADRLHNMRT+ M P KQ + ET+ ++AP+A
Sbjct: 149 KLEAQAENLRKMFLAMAKDIRVIIVKLADRLHNMRTMEFMTPAKQKEKSRETMDIYAPIA 208
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y E Y ++ V DL + E +I+ E + +
Sbjct: 209 QRLGISKIKTELDDLSLKYYQPEVYNQL---VHDLNARKTEREEFVQQIVA---EVSKHM 262
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 263 KNADIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 310
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PK N YQSLHTTLI PF E+QIRT
Sbjct: 311 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLIGPSGQPF--------EIQIRT 362
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + G + +G LN +++WL I EW
Sbjct: 363 EEMHKTAEYGIAAHWK----------YKETGGSNTKG----LNTQE--EKLNWLRQILEW 406
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFQEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A+ KI +
Sbjct: 464 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKSKINSWF 518
Query: 658 REQ 660
+++
Sbjct: 519 KKE 521
>gi|424845459|ref|ZP_18270070.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
gi|363986897|gb|EHM13727.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
Length = 762
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 307/535 (57%), Gaps = 60/535 (11%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W +L IS YL+ +EL+ V A + A AH Q R GEP+IIHPV A IL +++LD
Sbjct: 48 WRELWSKISRYLNRDELKGVGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDV 107
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
++ A LLHD +EDT T E++ E FG V +V+G V+KLGKL K + +D +
Sbjct: 108 ATLQAALLHDVLEDTEC-TAEQMRERFGEVVTTLVDG---VTKLGKLPFK----TFEDYQ 159
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFL M +++RV+++KLADR HNMR+L M KQ A ETL+++APLA LG+
Sbjct: 160 AENLRKMFLVMAKDIRVVLIKLADRTHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGI 219
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
YQ+K LE+L+F Y + E Y ++K +V E E +E+A +IL + LD M +
Sbjct: 220 YQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREAVVEQALEILQAR------LDEMGI 273
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
K I+ K YSIY+ + + + SI+++ + LR+I++ CY VL
Sbjct: 274 KNSIKGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDVAQ------------CYSVL 321
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH IW PIP DYIA PK N YQSLHTT+ L S LEVQIRT M AE G
Sbjct: 322 GVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTV---LGPSGEPLEVQIRTWAMHWRAEYG 378
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
+AAH+ R G + + ++ ++ W+ E +E S
Sbjct: 379 VAAHW-----------------RYKEGDS---HVDDLDSKLEWIRRALEGSDE----TNS 414
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ + D+L S VFVFTP G++KNLP+G+TVVD+A+ +HT++G + V A VN +V
Sbjct: 415 EEFMERLKDDVLTSDVFVFTPEGDVKNLPRGSTVVDFAFSVHTQVGEQYVGAMVNNRIVP 474
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALS 664
+ L N ++V+I+T S+ + + WL K+ A+ KI + + +L+
Sbjct: 475 ADYELHNGDIVKIMT------SSSAKPSRDWLRFVKSSKAKSKIRAYFKRLDSLA 523
>gi|283138927|gb|ADB12530.1| putative GTP pyrophosphokinase RelA [uncultured bacterium 9F08]
Length = 736
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 314/548 (57%), Gaps = 56/548 (10%)
Query: 115 PSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIH 174
PS S D +EDS + +W + S E+ L+R AL +A +AH Q R SGEP++ H
Sbjct: 9 PSPSHD--REDS-KSIW--IASLAEGRSEEEIALIRTALEIADKAHVEQLRASGEPYLTH 63
Query: 175 PVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG 234
+ VA I+ L LD ESIAA +LHD VEDT + T E++ E+ G V +V+G TK+S +G
Sbjct: 64 AMAVADIVAGLRLDHESIAAAILHDVVEDTGI-TLEQVAEQCGQAVAHLVDGVTKMSYIG 122
Query: 235 KLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT 294
+ + +KA+ LR++ LAM E+VRV+++KLADRLHNMRTL H+P KQ IA
Sbjct: 123 DYQLNGAQQGKEQIKAESLRKLLLAMAEDVRVVMIKLADRLHNMRTLKHLPEEKQRRIAR 182
Query: 295 ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 354
ET+ ++APLA LG++QIK ELE+LSF Y + Y +V R + + + + ++ IL
Sbjct: 183 ETMDIYAPLANRLGIWQIKWELEDLSFRYLDPVTYKQVARFLDERRVDRQGYIDNVIGIL 242
Query: 355 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCS 413
K+ LD VK +I+ K +SI+K +K++G S +++ + +R+++
Sbjct: 243 EKQ------LDKAGVKADIKGRPKHLFSIWKK-MKNKGLSFHDLYDVRAVRVLVDSVAD- 294
Query: 414 GVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRL 473
CYHVLG+VH +W IP+ DYIATPK N YQS+HT ++ ++ L
Sbjct: 295 -----------CYHVLGVVHSLWPHIPKEFDDYIATPKENNYQSIHTAVVGPGGKT---L 340
Query: 474 EVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWL 533
EVQIRT EMD AE G+AAH+ + GR +G +I+WL
Sbjct: 341 EVQIRTWEMDKHAELGVAAHW-----------RYKEGGRHDKG---------FEQKIAWL 380
Query: 534 NAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTE 593
+ +W+EE + +F+D ++ RV++ TP GE+ +LP+GAT +D+AY +HTE
Sbjct: 381 RQLLDWKEE---EANAGDFIDRFKSEVFQDRVYILTPNGEVFDLPQGATPLDFAYYVHTE 437
Query: 594 IGNKMVAAKVNGNLVSPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHK 652
+GN+ AKVNG +V T+ L + E VE++T S+ H L + KT AR K
Sbjct: 438 VGNRCRGAKVNGRIVPLTYELKSGEQVEVLTTKQGGPSRDWLNPH---LGYLKTSRARSK 494
Query: 653 IMKFLREQ 660
+ ++Q
Sbjct: 495 ARSWFKQQ 502
>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
Length = 724
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 296/518 (57%), Gaps = 67/518 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V +A LA EAH QKR SGEP+I+HPVEVA IL E+ +D +I AGLLHD +EDT
Sbjct: 19 KMVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEY 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T+E I EF V +V+G V+KLGK++ K + ++ +AD++R+M LAM +++RV
Sbjct: 79 -TYEDICSEFSVEVANLVDG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADR+HNMRTL +MP KQ A ET ++APLA LGM +IK ELE+L+F Y N
Sbjct: 131 ILIKLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINP 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R++++ +E E+ + E +++++E++ LD + +EI K YSIY+
Sbjct: 191 NEYYFIVRKISEKREEREEYIGE----VIQQLENN--LDRAGISSEIDGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ +I+++ + +RI L + CY LG+VH I+ PIP KDY
Sbjct: 245 MVNKNKTIDQIFDLTAVRI------------LVETVKDCYAALGIVHTIYKPIPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLH+T+I PF E+QIRT M AE GIAAH+ + V
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFAMHKTAEYGIAAHWKYKEGVE 344
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+I +++WL I EWQ E + EF++ DL
Sbjct: 345 --------------------TADDIDKKLTWLREILEWQRE---TSDAEEFMEGFKIDLF 381
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G + NLP AT +D+AY IHT+IGN+ AKV+G +V + L E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNRCTGAKVSGKMVPLDYHLKTGEIVE 441
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
II S WL K+ A+ KI + ++
Sbjct: 442 IIASTTPKGPSI-----DWLSIVKSNQAKSKIRAWFKK 474
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 294/518 (56%), Gaps = 67/518 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V++A A EAH QKR SGEP+I+HPVEVA IL E+ +D +I AGLLHD VEDT
Sbjct: 19 KMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEF 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
+ E + EF V +VEG V+KLGK++ K + ++ +AD++R+M LAM++++RV
Sbjct: 79 -SREDVSREFSVEVANLVEG---VTKLGKIEYKTK----EEQQADNVRKMLLAMSDDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADRLHNMRTL +P KQ A ET ++APLA LGM +IK ELE+L+F Y N
Sbjct: 131 ILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQ 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R++++ E EK +E+ ++KK+ ++ + + T+I K YSIY+
Sbjct: 191 NEYYFIVRKISEKRVEREKYIEQ----IIKKLREN--MQKAGINTDIEGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++K +I+++ + +RI L S + CY LG+ H I+ P+P KDY
Sbjct: 245 MVKKNKTIDQIFDLTAVRI------------LVSTMKDCYAALGIAHTIYKPVPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PK N YQSLHTT+I PF E+QIRT EM AE GIAAH+
Sbjct: 293 IAMPKANMYQSLHTTVIGPQGKPF--------EIQIRTFEMHKTAEYGIAAHW------- 337
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ K +I +++WL + EWQ E + EF++ DL
Sbjct: 338 -------------KYKEGADTAEDIDKKLTWLREMLEWQRE---TSDAEEFMERFKIDLF 381
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G + NLP AT +D+AY IHT+IGN V AKV+G +V + L E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNSCVGAKVSGKMVPLDYHLKTGEIVE 441
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ N S WL K+ A+ KI + ++
Sbjct: 442 VFVSNTPKGPSI-----DWLNIVKSNQAKSKIRSWFKK 474
>gi|418972852|ref|ZP_13520907.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383350928|gb|EID28766.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 740
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 308/527 (58%), Gaps = 61/527 (11%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED---DQFLDLMTVKTEI 373
E+LSF Y N ++ K+ + + +E E ++E ++ K+E+ D+ L K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLEEYTIDRHL-----KGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSI++ + R E+ + +R I+ Q Y +LG VH
Sbjct: 239 YGRPKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH
Sbjct: 287 ELWKPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V N+ A+ ++W+ + E Q++ ++EFV
Sbjct: 343 WAYKKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ + L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 443 LKTGDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|260655712|ref|ZP_05861185.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
gi|260629629|gb|EEX47823.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
Length = 762
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 307/535 (57%), Gaps = 60/535 (11%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
W +L IS YL+ +EL+ V A + A AH Q R GEP+IIHPV A IL +++LD
Sbjct: 48 WRELWSKISRYLNRDELKGVGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDV 107
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
++ A LLHD +EDT T E++ E FG V +V+G V+KLGKL K + +D +
Sbjct: 108 ATLQAALLHDVLEDTEC-TAEQMRERFGEVVTTLVDG---VTKLGKLPFK----TFEDYQ 159
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+MFL M +++RV+++KLADR HNMR+L M KQ A ETL+++APLA LG+
Sbjct: 160 AENLRKMFLVMAKDIRVVLIKLADRAHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGI 219
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
YQ+K LE+L+F Y + E Y ++K +V E E +E+A +IL + LD M +
Sbjct: 220 YQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREAVVEQALEILQAR------LDEMGI 273
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
K I+ K YSIY+ + + + SI+++ + LR+I++ CY VL
Sbjct: 274 KNSIKGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDVAQ------------CYSVL 321
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+VH IW PIP DYIA PK N YQSLHTT+ L S LEVQIRT M AE G
Sbjct: 322 GVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTV---LGPSGEPLEVQIRTWAMHWRAEYG 378
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
+AAH+ R G + + ++ ++ W+ E +E S
Sbjct: 379 VAAHW-----------------RYKEGDS---HVDDLDSKLEWIRRALEGSDE----TNS 414
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ + D+L S VFVFTP G++KNLP+G+TVVD+A+ +HT++G + V A VN +V
Sbjct: 415 EEFMERLKDDVLTSDVFVFTPEGDVKNLPRGSTVVDFAFSVHTQVGEQYVGAMVNNRIVP 474
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALS 664
+ L N ++V+I+T S+ + + WL K+ A+ KI + + +L+
Sbjct: 475 ADYELHNGDIVKIMT------SSSAKPSRDWLRFVKSSKAKSKIRAYFKRLDSLA 523
>gi|343525499|ref|ZP_08762454.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395769|gb|EGV08307.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 738
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ L+++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E E+ ++ KIE + + +I
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----IYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINLVKTSKARNKIRQFFKNQ 484
>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
27755]
gi|166029009|gb|EDR47766.1| RelA/SpoT family protein [Dorea formicigenerans ATCC 27755]
Length = 803
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 328/574 (57%), Gaps = 61/574 (10%)
Query: 92 LLGKLPRSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPN-ELELVR 150
L GK+ +LL + ++ + +A D P++L+ L I P+ ++ +
Sbjct: 33 LDGKIAPEALLKDTRGKLQMVDGHGIKQEA-DYDDPDKLYGMLIARIQKYHPSADVTQIE 91
Query: 151 RALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFE 210
+A LA +AH QKR+SGEP+IIHP+ VA IL +LE+D E+I A LLHD VEDT + +
Sbjct: 92 KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTRIGE-D 150
Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
I+EEFG V +V+G V+KLG++ + +Q A++LR+MFLAM +++RVII+K
Sbjct: 151 YIKEEFGEEVALLVDG---VTKLGRVAYSADKLELQ---AENLRKMFLAMAKDIRVIIIK 204
Query: 271 LADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYA 330
LADRLHNMRTL M P KQ A ET+ ++AP+A LG+ +IK+EL++LS Y + +
Sbjct: 205 LADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFF 264
Query: 331 KVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT--VKTEIRSVCKEPYSIYKAVL 388
+ ++ E E+ +++I D+ + + +K ++ K +SIYK ++
Sbjct: 265 DLVNQINARKTEREE--------FVQQIVDEVSMHMKNAGIKADVNGRVKHFFSIYKKMV 316
Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
+++++ + +RII+ + CY LG++H I+TPIP KDYIA
Sbjct: 317 NQDKTVDQIYDLFAVRIIV------------DSVKDCYAALGIIHEIYTPIPGRFKDYIA 364
Query: 449 TPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHAR 508
PKPN YQSLHTTL+ + + E+QIRT+EM AE GIAAH+ +
Sbjct: 365 MPKPNMYQSLHTTLMSSIGQP---FEIQIRTQEMHKTAEYGIAAHWK-----------YK 410
Query: 509 PNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR--DLLGSRVF 566
+G S +G ++SWL I EWQ + N +EF+ I DL V+
Sbjct: 411 ESGGSKKGVMAEEE------KMSWLRQILEWQRDMSDN---KEFLSLIKGDLDLFADDVY 461
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
FTP+G++K LP G+T +D+AY IH+ +GNKMV A+VNG LV + + N + +EI+T
Sbjct: 462 CFTPQGDVKTLPTGSTPIDFAYSIHSAVGNKMVGARVNGKLVPIDYRIQNGDRIEILT-- 519
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
S+++ + WL K+ A++KI ++ +++
Sbjct: 520 ---SQNSKGPSRDWLNVVKSTQAKNKINQWFKKE 550
>gi|162452118|ref|YP_001614485.1| GTP diphosphokinase [Sorangium cellulosum So ce56]
gi|50403843|gb|AAT76675.1| pp(p)Gpp synthetase/hydrolase [Sorangium cellulosum So ce56]
gi|161162700|emb|CAN94005.1| GTP diphosphokinase [Sorangium cellulosum So ce56]
Length = 724
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 295/522 (56%), Gaps = 56/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y +++L+ RA + +AH GQ R+SG+P+ HP VA I+ EL+LD S+ AGLLH
Sbjct: 13 TYQPAADVDLIARAYAYSSDAHKGQTRKSGDPYFSHPASVAAIITELKLDTASVCAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + IE FG V +V+G TK+SK+ S +D +A++ R+M +
Sbjct: 73 DVVEDTLATTTD-IENSFGQEVAFLVDGVTKLSKIN-------FASKEDRQAENFRKMLV 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RV++VKL DRL NMRTL M P Q IA ET++++APLA LG+ + KSELE+
Sbjct: 125 AMARDIRVLLVKLCDRLDNMRTLEFMKPEAQDRIARETMEIYAPLANRLGIARFKSELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y E ++ + ++V KE +K + E +K+L K+ + F ++ K
Sbjct: 185 LSFRYIEPEAWSDLSQKVKTTAKERDKYIHEVSKVLAGKLAEQGF------AVDVTGRAK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + ++V + R++++ CY LG++H WTP
Sbjct: 239 HLYSIWRKMQAQQCDFDQVYDVIAFRVLVESVAD------------CYATLGVIHSQWTP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDY+A PKPN YQSLHTT+I E R+E+QIRT EM +AE+GIAAH+ +
Sbjct: 287 VPGRFKDYVALPKPNMYQSLHTTVIGPGRE---RIEIQIRTHEMHRVAEQGIAAHWKYKE 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G G P+ A R WL + E+Q+E EF++++
Sbjct: 344 NNSG--------GIDPKD----------AARFGWLRQLMEFQKEL---KDPAEFLESVKV 382
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G+++ P+G+T +D+AY IHT++G A+VNG +V L N +
Sbjct: 383 DLFQDEVYVFTPKGDVRVFPRGSTPIDFAYAIHTQVGEHCSGARVNGAIVPLRSKLRNGD 442
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVE++T N S K WL++ T AR KI FLR +
Sbjct: 443 VVEVMT-NPSQHPS-----KDWLDYVSTSRARSKIRNFLRTE 478
>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
Length = 724
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 296/518 (57%), Gaps = 67/518 (12%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V +A LA EAH QKR SGEP+I+HPVEVA IL E+ +D +I AGLLHD +EDT
Sbjct: 19 KMVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEY 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T+E I EF V +V+G V+KLGK++ K + ++ +AD++R+M LAM +++RV
Sbjct: 79 -TYEDICSEFSVEVANLVDG---VTKLGKIQYKTK----EEQQADNVRKMLLAMAKDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KLADR+HNMRTL +MP KQ A ET ++APLA LGM +IK ELE+L+F Y N
Sbjct: 131 ILIKLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINP 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y + R++++ +E E+ + E +++++E++ LD + +EI K YSIY+
Sbjct: 191 NEYYFIVRKISEKREEREEYIGE----VIQQLENN--LDRAGISSEIDGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ +I+++ + +RI L + CY LG+VH I+ PIP KDY
Sbjct: 245 MVNKNKTIDQIFDLTAVRI------------LVETVKDCYAALGIVHTIYKPIPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
IA PKPN YQSLH+T+I PF E+QIRT M AE GIAAH+ + V
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTFAMHKTAEYGIAAHWKYKEGVE 344
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+I +++WL I EWQ E + EF++ DL
Sbjct: 345 --------------------TADDIDKKLTWLREILEWQRE---TSDAEEFMEGFKIDLF 381
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
VFVFTP+G + NLP AT +D+AY IHT+IGN+ AKV+G +V + L E+VE
Sbjct: 382 SDEVFVFTPKGTVINLPYEATPIDFAYKIHTDIGNRCTGAKVSGKMVPLDYHLKTGEIVE 441
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
II S WL K+ A+ KI + ++
Sbjct: 442 IIASTTPKGPSI-----DWLSIVKSNQAKSKIRAWFKK 474
>gi|392972298|ref|ZP_10337690.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|403046373|ref|ZP_10901844.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
gi|392510011|emb|CCI60993.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|402763873|gb|EJX17964.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
Length = 729
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 306/529 (57%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS + E V ++ +A+EAH+GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLSKAKSYLSKEDYEYVLKSYHIAYEAHEGQFRKNGLPYIMHPIQVAGILTEMHLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TF+ ++ F + IVEG TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFDDVQGMFNEEIAVIVEGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRT+ MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTIKPMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y ++ Y R+ +L K+ E E+ + + +I+ D + M +
Sbjct: 183 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREDYIQNAINRIQAD--MSSMNIVG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +RII+ + CY VLGL
Sbjct: 237 EINGRPKHIYSIYRKMVKQKKQFDQIFDLLAVRIIV------------NSINDCYAVLGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTSEMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V N +++W I+E+ E + E
Sbjct: 342 AHWAYK-----------------EGKKVTEKAQNFNKKLNW---IKEFAETDNTTSDAEE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY +H+E+GNKM+ +KVNG +
Sbjct: 382 FMETLKFDLQSDKVYAFTPESDVVELPYGAVPIDFAYAVHSEVGNKMIGSKVNGKIEPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VL ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 442 YVLQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKSKIRSFFKKQ 485
>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 774
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 314/543 (57%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE+L+ L + P+ ++ ++ +A + EAH Q R+SGEP+IIHP+ V IL +
Sbjct: 37 DPEQLYHVLIERVRKYHPSADITMIEKAYRIGKEAHRDQVRKSGEPYIIHPLWVGIILAD 96
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT++ T + + EFG V +V+G V+KLG+L N +
Sbjct: 97 LEMDKETIVAGMLHDAVEDTDM-TLDDVAGEFGEEVALLVDG---VTKLGQL---NYSQD 149
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+V+A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 150 KLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPTKQQEKARETMDIYAPIA 209
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y E Y + R DL + + E +I+ E + +
Sbjct: 210 QRLGISKIKTELDDLSLKYWKPEVYYNLVR---DLNRRKTEREEFVQQIVA---EVSKHM 263
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 264 KNAHIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 311
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ PF E+QIRT
Sbjct: 312 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 363
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + + +S + LN WL I EW
Sbjct: 364 EEMHKTAEYGIAAHWKYK--------EGGDSAKSMESQEAKLN---------WLRQILEW 406
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 407 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 463
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 464 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKNKINQWF 518
Query: 658 REQ 660
+++
Sbjct: 519 KKE 521
>gi|423069352|ref|ZP_17058139.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0395]
gi|355364792|gb|EHG12520.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0395]
Length = 738
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ L+++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHDVRLIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E E+ ++ KIE + + +I
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINLVKTSKARNKIRQFFKNQ 484
>gi|225867804|ref|YP_002743752.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
gi|225701080|emb|CAW97905.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
Length = 739
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 309/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ELV++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T E IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ + +E +E E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTDQGLYGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ + + +++ + +R +++ Q Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RGK +N A + ++W+ + E Q N ++ FVD++ D
Sbjct: 347 ------------KGIRGK---INQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440256|ref|ZP_08619849.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336013722|gb|EGN43596.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 767
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 314/543 (57%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE+L+ L + P+ ++ ++ +A + EAH Q R+SGEP+IIHP+ V IL +
Sbjct: 30 DPEQLYHVLIERVRKYHPSADITMIEKAYRIGKEAHRDQVRKSGEPYIIHPLWVGIILAD 89
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT++ T + + EFG V +V+G V+KLG+L N +
Sbjct: 90 LEMDKETIVAGMLHDAVEDTDM-TLDDVAGEFGEEVALLVDG---VTKLGQL---NYSQD 142
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+V+A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 143 KLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPTKQQEKARETMDIYAPIA 202
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ +IK+EL++LS Y E Y + R DL + + E +I+ E + +
Sbjct: 203 QRLGISKIKTELDDLSLKYWKPEVYYNLVR---DLNRRKTEREEFVQQIVA---EVSKHM 256
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 257 KNAHIEAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PKPN YQSLHTTL+ PF E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPF--------EIQIRT 356
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + + +S + LN WL I EW
Sbjct: 357 EEMHKTAEYGIAAHWKYK--------EGGDSAKSMESQEAKLN---------WLRQILEW 399
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKNKINQWF 511
Query: 658 REQ 660
+++
Sbjct: 512 KKE 514
>gi|387908943|ref|YP_006339249.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
MN-ZLW-002]
gi|387573878|gb|AFJ82584.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
MN-ZLW-002]
Length = 739
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT NA S F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-NAHS----FGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|418965552|ref|ZP_13517319.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
constellatus SK53]
gi|383342204|gb|EID20437.1| RelA/SpoT family protein [Streptococcus constellatus subsp.
constellatus SK53]
Length = 738
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ L+++AL A + H GQ R+SGEP+IIHP++VA IL +L+LD S+A G
Sbjct: 16 TRKYLSSEDVTLIQKALFYAVDRHRGQFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT T + +E EFG VR IV+G V+KLGK+K + + A++ R+M
Sbjct: 76 LHDVVEDT-AATLDDLEGEFGHDVRVIVDG---VTKLGKVKYMSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y N ++ K ++ L KE +E E+ ++ KIE + + +I
Sbjct: 188 EDLAFRYLNPTEFYK----ISHLMKEKRREREDLVDEVVHKIE--TYASERNLHGQIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I+ Q Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 RPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q++ + +++FVD++
Sbjct: 346 KKGIKGQV-----------------DSKESAIGMNWIKEMMELQDQ---SNDAQDFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K V AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKAVGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SSNSFGPSRDWINLVKTSKARNKIRQFFKNQ 484
>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
Length = 762
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 317/545 (58%), Gaps = 70/545 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE L++DL TI P +++ ++ +A +A EAH QKR+SGEP+IIHP+ VA IL +
Sbjct: 22 SPEELYQDLIATIRKYHPSDDITMIEKAYRVAKEAHREQKRKSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AGLLHD VEDT ++ + + ++FG V +V+G TK+++L K K E
Sbjct: 82 LEMDKETIEAGLLHDVVEDT-AMSLDELAKQFGTEVSFLVDGVTKLTQLSWDKDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++AD+LR+MFLAM +++RVII+KLADRLHNMRT + P KQ A ET++++AP+A
Sbjct: 138 ---IQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--Q 362
LG+ +IK EL++LS Y E Y + +V+ L K +A + +++I D+ Q
Sbjct: 195 DRLGISKIKIELDDLSLKYLKPEVYYDLVEKVS-LRK-------DAREAFVQEIVDEVKQ 246
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ ++ I K +SIYK ++ +++++ + +RI+++
Sbjct: 247 HMKDAGIEAAIGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVE------------TV 294
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQI 477
+ CY LG++H ++ PIP KDYIA PK N YQSLHTTLI PF E+QI
Sbjct: 295 KDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPF--------EIQI 346
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM AE GIAAH+ + +G V + ++SWL I
Sbjct: 347 RTYEMHRTAEYGIAAHWKYKESGSGQVAASSEEA-----------------KLSWLRQIL 389
Query: 538 EWQEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
EWQ + S+EF+ + DL V+ FTP G++K L G+T +D+AY IH+ +G
Sbjct: 390 EWQRD---TDDSKEFLSMVKGDLDLFSDSVYCFTPSGDVKTLTSGSTPIDFAYAIHSAVG 446
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK 655
NKMV A+VNG LV+ +V+ N + +EIIT S+++ + WL K+ A++KI +
Sbjct: 447 NKMVGARVNGKLVNIDYVIQNGDQIEIIT-----SQNSKGPSRDWLNIVKSTQAKNKINQ 501
Query: 656 FLREQ 660
+ + +
Sbjct: 502 WFKNE 506
>gi|255521241|ref|ZP_05388478.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J1-175]
Length = 696
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 304/521 (58%), Gaps = 55/521 (10%)
Query: 165 RRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIV 224
R+SGEP+IIHP++VA IL EL++D ++A+G LHD VEDT VT +EE FG+ V +V
Sbjct: 2 RKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDT-PVTLADLEEVFGSEVAMLV 60
Query: 225 EGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHM 284
+G V+KLGK+K K S ++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+
Sbjct: 61 DG---VTKLGKIKYK----SHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHL 113
Query: 285 PPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHE 344
P KQ IA ETL++FAPLA LG+ ++K ELE+ + Y N + Y R+ L K+
Sbjct: 114 PVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYY----RIVHLMKQKR 169
Query: 345 KELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLR 404
E ++ + ++ LD + ++ +I K YSIY+ + + NE+ + +R
Sbjct: 170 DARERYLHDVIDGVNEN--LDELNIQADISGRPKHIYSIYRKMSEQNKQFNEIYDLLAVR 227
Query: 405 IIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIP 464
I++ S + C VLG++H W P+P KDYIA PK N YQS+HTT+I
Sbjct: 228 IVV------------SSIKDCXAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIG 275
Query: 465 FLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNA 524
E LEVQIRT EM IAE G+AAH+ A G+ KT N
Sbjct: 276 PQGEP---LEVQIRTHEMHQIAEYGVAAHW------------AYKEGKVVNSKTSFDN-- 318
Query: 525 NIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVV 584
+++W I E+Q E + + EF++++ DL V+VFTP+G++ LP G+ +
Sbjct: 319 ----KLTWFREILEYQNE---SDNAEEFMESLKLDLFSDVVYVFTPKGDVYELPNGSVPL 371
Query: 585 DYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHA 644
D+AY +HTEIGNK + AK+NG +V+ + L ++++I+T SK ++ + WL+
Sbjct: 372 DFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDIIDILT-----SKHSYGPSRDWLKLV 426
Query: 645 KTRSARHKIMKFLREQAALSASEITADTVGDFVADSGEESE 685
+T AR+KI +F + QA E D V + G ES+
Sbjct: 427 QTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQLGFESK 467
>gi|386085853|ref|YP_006001727.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
ND03]
gi|312277566|gb|ADQ62223.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
ND03]
Length = 739
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 SYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT NA S F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-NAHS----FGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|414564881|ref|YP_006043842.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|338847946|gb|AEJ26158.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 739
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 309/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ELV++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T E IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ + +E +E E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTEQGLYGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ + + +++ + +R +++ Q Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RGK +N A + ++W+ + E Q N ++ FVD++ D
Sbjct: 347 ------------KGIRGK---VNQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
Length = 723
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 303/537 (56%), Gaps = 68/537 (12%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKDSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIVSNLQ------QNLKKAG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEAVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNRATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E++E++T S + + WL K+ A+ KI + +++
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAKSKIRAWFKKE 475
>gi|282600882|ref|ZP_05980016.2| GTP diphosphokinase [Subdoligranulum variabile DSM 15176]
gi|282571256|gb|EFB76791.1| RelA/SpoT family protein [Subdoligranulum variabile DSM 15176]
Length = 736
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/532 (38%), Positives = 301/532 (56%), Gaps = 60/532 (11%)
Query: 131 WEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
++DL+ + P + E++ RA LA +AH GQ+RRSGEP+I HP+ VA+IL EL +D
Sbjct: 24 YDDLKKNMVDSGRPYDFEMIDRAYALAAQAHGGQRRRSGEPYICHPLSVAQILVELGMDS 83
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
ESIAA L+HD EDT V E I+++FG V +V+G V+KL ++K N V+D +
Sbjct: 84 ESIAAALMHDVAEDTPVTVAE-IKQKFGPEVALLVDG---VTKLTQIKFSN----VEDRQ 135
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++LR+M LAM+++VRV+I+KL DRLHNMRT P K+ A ET++V+AP+A LG+
Sbjct: 136 AENLRKMLLAMSQDVRVMIIKLCDRLHNMRTGDAWPEQKRRDKALETMEVYAPIAHRLGI 195
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKE-LEEANKILMKKIEDDQFLDLMT 368
IK ELE+ S Y + Y ++ DL +H E L + + + + ++
Sbjct: 196 SNIKEELEDRSLHYLDPIGYETIR----DLLNKHGDEFLHKVCHTIARHLAENGI----- 246
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
K IR K Y IY+ + E+ I +RII++ P CY
Sbjct: 247 PKATIRHRVKSIYGIYRKMYMQNKDFEEIYDIYAVRIILENVPE------------CYTA 294
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGL+H ++ P+P KDYI+TPKPNGYQSLHTT+I EVQIRT +MD +AE
Sbjct: 295 LGLIHDMYHPLPNRFKDYISTPKPNGYQSLHTTVIG---REAIPFEVQIRTWDMDRMAEY 351
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + +TG +N + R++W+ + E Q +
Sbjct: 352 GIAAHWKYKAGITGS------------------SNDKLDERLAWVRQLLESQR---SSAD 390
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+ + + I DLL VF FTPRG++ NLP GATV+D+AY IH+ +GN+M+ AKVN +V
Sbjct: 391 ATDLLSDIKSDLLPEEVFAFTPRGDVINLPAGATVIDFAYAIHSAVGNRMIGAKVNNRIV 450
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
S H + E++EI+T S + WL KT A++KI + +++
Sbjct: 451 SIDHKVQTGEIIEILTGPENRGPS-----RDWLNIVKTSEAKNKIRNWFKKE 497
>gi|116513948|ref|YP_812854.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093263|gb|ABJ58416.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 754
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 297/521 (57%), Gaps = 57/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ N+L V A A AH+GQ R SG+P+I+HP +VA L L LD +++AAG LHD
Sbjct: 19 YMTANQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+ VT + I+E+FGA V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTS-VTNDDIKEKFGADVAFIVDGVTKLNKY-------EYKSHKEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSH-MPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
M +++RVI+VKLADRLHNM TL H + P KQ IA ETL ++APLA LG+ IK +LE+
Sbjct: 131 MAKDLRVILVKLADRLHNMHTLEHLLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N E Y K+ + E E +++A L LD + +K +I K
Sbjct: 191 MSFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGT------LDSLGIKYDISGRPK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK ++ + NE+ + +R+I+ P CY VLG VH W P
Sbjct: 245 HIYSIYKKMVNKHKNFNEIYDLLAVRVIV---------PTVKD---CYAVLGAVHTKWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQSLHTT+I LE+QIRTEEM +AE G+AAH++
Sbjct: 293 MPGRFKDYIAMPKANGYQSLHTTIIG---PGGKPLEIQIRTEEMHKVAEYGVAAHWA--- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ R N + K AL I RE E + + EF++ +
Sbjct: 347 -------YKRGNFQGVDEKE------GGALDIG-----REILELQKDSSDADEFMEAVHS 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP+GE+ LPKG+ +D+AY IHT++G+ + AKVN LV + L N +
Sbjct: 389 DIFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
VV+I+T +S + + W E KT A++KI ++ R+
Sbjct: 449 VVDILT------QSNARPSRDWAEMVKTSRAKNKIRRYFRD 483
>gi|195978873|ref|YP_002124117.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975578|gb|ACG63104.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 739
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 309/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ELV++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMTDGDVELVQKALDYATAAHFYQIRKSGEPYIVHPIQVAAILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T E IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ + +E +E E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTEQGLYGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ + + +++ + +R +++ Q Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RGK +N A + ++W+ + E Q N ++ FVD++ D
Sbjct: 347 ------------KGIRGK---VNQAEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|15613805|ref|NP_242108.1| GTP pyrophosphokinase [Bacillus halodurans C-125]
gi|10173858|dbj|BAB04961.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans
C-125]
Length = 728
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 311/522 (59%), Gaps = 59/522 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL + +E ++RA A +AH GQ R+SGEP+I+HPV+VA I+ +LELD ++AA LHD
Sbjct: 17 YLDEHHIEFLQRAYEFAEKAHAGQYRKSGEPYILHPVQVAGIIVDLELDPNTVAAAFLHD 76
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+V T E +E+EF V +V+G TK+ K+ + + +A++ R+M +A
Sbjct: 77 VVEDTDV-TVEALEKEFNEQVAMLVDGVTKLKKIKYKSKEEQ-------QAENHRKMLVA 128
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADRLHNMRTL +MPP KQ + ETL++FAPLA LG+ IK ELE++
Sbjct: 129 MAKDIRVILIKLADRLHNMRTLRYMPPEKQRITSNETLEIFAPLAHRLGISTIKWELEDI 188
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+ Y + + Y R+ +L K+ E EE + ++ KI Q D+ V+ EI K
Sbjct: 189 ALRYLDPQQYY----RIVNLMKKKRAEREEYIEDVIDKIRK-QLQDI-KVEAEISGRPKH 242
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ ++ NE+ + +RII+K + CY LG++H W P+
Sbjct: 243 IYSIYRKMVLQNKQFNEIYDLLAVRIIVKNI------------KDCYAGLGVIHTCWKPM 290
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LEVQIRTEEM +AE G+AAH++ +
Sbjct: 291 PGRFKDYIAMPKANMYQSLHTTVVG---PNGDPLEVQIRTEEMHRVAEYGVAAHWAYK-- 345
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNAN-IALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G T+ AN + +++W I EWQ + ++EF++++
Sbjct: 346 ---------------EGTTL----ANPMEDKLTWFREILEWQND---TNDAQEFMESLKM 383
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LP+G+ +D+AY IHTEIGN+ + AKVNG +V H L +
Sbjct: 384 DLFSDMVFVFTPKGDVIELPRGSVPLDFAYRIHTEIGNRCIGAKVNGKMVPLDHQLKTGD 443
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VE++T SK ++ + WL+ ++ A++KI ++ +++
Sbjct: 444 IVEVLT-----SKHSYGPSQDWLKITQSSHAKNKIKQWFKKE 480
>gi|307127856|ref|YP_003879887.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
gi|306484918|gb|ADM91787.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
Length = 740
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYK----SIEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTERHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHEFW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGY S+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYXSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+ ++ ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIV-----ANPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|340751522|ref|ZP_08688334.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium mortiferum ATCC 9817]
gi|229420490|gb|EEO35537.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium mortiferum ATCC 9817]
Length = 727
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 200/517 (38%), Positives = 305/517 (58%), Gaps = 64/517 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++E ++ A A E H+GQ R+SGE +I+HPVEV +IL ++++D ++I AG+LHD VEDT
Sbjct: 19 DIEKIKLAFFFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKMDTDTIVAGILHDIVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
++T I+ FG TV +V+G TK+ L K ++EN +R+M LAM +
Sbjct: 79 -LITLADIKYNFGETVATLVDGVTKLKTLPNGTKKQDEN----------IRKMILAMAQN 127
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RVII+KLADRLHNMRT+ +M P KQ SI+ ETL ++APLA LG+ +IK ELE+L+ Y
Sbjct: 128 LRVIIIKLADRLHNMRTMKYMKPEKQISISQETLDIYAPLAHRLGIAKIKWELEDLALRY 187
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
++Y +K + KE E+ ++ + ++ L +K ++ K YSI
Sbjct: 188 LKPKEYMNIKSLIDSKKKEREEYIQGFIETIV------NLLHETGIKGSVKGRFKHFYSI 241
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
YK + + +++ + +RII+ + CY+ LG++H + P+P
Sbjct: 242 YKKMYEKNKEFDDIYDLMGVRIIV------------DTEGECYNTLGVIHSHFKPVPGRF 289
Query: 444 KDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
KDYIA PK N YQS+HTT++ P + F +E+QIRTEEMD +AE GIAAH+S
Sbjct: 290 KDYIAVPKSNNYQSIHTTIVGP---QGKF-IEIQIRTEEMDKVAEEGIAAHWS------- 338
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ + + + V WL I E Q+E T++EF+D++T+D++
Sbjct: 339 ----YKEHTKVTKSDQVY----------GWLRNILELQKE---TETAQEFIDSVTKDIMN 381
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
VFVF+P+G+I LP+GAT +D+A+ IHT+IG K V AKVNG +V+ + L N + VEI
Sbjct: 382 ETVFVFSPKGDITELPQGATPLDFAFAIHTQIGCKCVGAKVNGKIVTLDYKLQNGDRVEI 441
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
IT SK++ +K WL+ T A+ KI K L++
Sbjct: 442 IT-----SKNSKGPNKDWLDIVVTHGAKSKIKKVLKD 473
>gi|342164246|ref|YP_004768885.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pseudopneumoniae IS7493]
gi|341934128|gb|AEL11025.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pseudopneumoniae IS7493]
Length = 740
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 304/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK++ K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVEYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K + ++ KE +E E ++ K+E ++ +K +I
Sbjct: 188 EDLSFRYLNPTEFYK----ITNMMKEKRREREALVDEVVTKLE--EYTIDRHLKGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ V G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGVKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|94544772|gb|ABF34820.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10270]
Length = 743
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKADVAFVAKALSYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGHDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
Length = 737
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 302/532 (56%), Gaps = 56/532 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ E L T YL+ E ++ +A + + AH GQ R SGEP++ HP+E A IL ++ LD
Sbjct: 3 RINEILDKTAVYLTEAEQAIITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
S+AAGLLHDTVEDT T + IEE FG V IV+G TK+S L + K E
Sbjct: 63 AASVAAGLLHDTVEDTKA-TVDEIEELFGDEVADIVDGVTKIS-LIPFESKEE------A 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM ++RV++VKLADRLHNMRTL P K++ IA ET+ ++APLA LG
Sbjct: 115 QAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+++IK+ELE+LSF Y + Y+++K V + E +E ++ +I Q +
Sbjct: 175 LHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIER----VIGQIR--QMVGENN 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ I K +S++ + +I++V+ + R++++ + CY V
Sbjct: 229 IRARIIGRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVE------------TIRECYAV 276
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LGLVH IW P+P KDYI+ PK N YQSLHTT++ E R+E+QIRT EM+ +AE
Sbjct: 277 LGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGE---RIEIQIRTVEMNRLAEE 333
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH+ + R G+ N R +WL I +WQ E
Sbjct: 334 GVAAHWKYK---------EREKGKF---------NPKDVERFTWLRQIMDWQREL---KD 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
SREFV + DL V+VFTP+GE+K LP+GAT VD A++IHT +G AKVNG LV
Sbjct: 373 SREFVANLRFDLFQDEVYVFTPKGEVKELPEGATAVDLAFVIHTAVGEHCAGAKVNGRLV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N + VEIIT + ++ WL+ KT AR +I F+R +
Sbjct: 433 PLETPLKNGDTVEIIT------DKNRRPNRDWLKFVKTAKARTRIKHFIRTE 478
>gi|312864064|ref|ZP_07724300.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
gi|311100477|gb|EFQ58684.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
Length = 739
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEEAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 MSFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G +++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 347 ----------------KGIKSKVDSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
Length = 755
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/563 (37%), Positives = 324/563 (57%), Gaps = 65/563 (11%)
Query: 127 PERLWEDLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L E L + P+E L ++ +A +A E H QKR+SGEP+IIHP+ VA IL +L
Sbjct: 20 PEELLEMLLKDVRSYHPSEDLSMITKAYEVAKEQHKEQKRKSGEPYIIHPLCVAIILADL 79
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
E+D E+IAAGLLHD VEDT + T E +E+EF V +V+G TK++KL N N
Sbjct: 80 EMDKETIAAGLLHDVVEDTGM-TLEEVEKEFNPDVATLVDGVTKLTKL------NLNSDK 132
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+++A++LR+MF++M +++RVII+KLADRLHN+RTL + P K+ A E+L++++PLA
Sbjct: 133 VEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 192
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +IK E+++LS Y E Y + +V +K +E + N I+ E + ++
Sbjct: 193 RLGISKIKIEMDDLSLKYLEPEVYYDLADKVH--FKREARE-DRINAIVE---EVREHIE 246
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ I+ K +SIYK ++ +I+++ + +RII++ + C
Sbjct: 247 ESGIEANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVE------------SVRDC 294
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
Y VLG++H ++ PIP KDYIA PKPN YQSLHTT+I PF E+QIRT
Sbjct: 295 YAVLGVIHKMYRPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPF--------EIQIRTF 346
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
EM AE GIAAH+ + G + ++ ++ WL+ I EWQ
Sbjct: 347 EMHRTAEFGIAAHWK----------YKEQGGSDKKATETEMS------KMKWLHEILEWQ 390
Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
++ S+EF++ + D L V+ FTP G++KNLP+G+T +D+AY IH+ +GNKM
Sbjct: 391 KD---ESDSKEFMNMVKSDLSLFNVNVYCFTPTGDVKNLPQGSTPIDFAYSIHSAVGNKM 447
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V AKVN LV + L N + V+IIT S+++ + WL+ K+ A++KI ++ R
Sbjct: 448 VGAKVNDKLVPIEYQLQNGDRVDIIT-----SQNSRGPSRDWLKIVKSTQAKNKINQWFR 502
Query: 659 EQAALSASEITADTVGDFVADSG 681
+ + D + +V G
Sbjct: 503 HEQKDENLDRGKDLLDKYVKAKG 525
>gi|251781660|ref|YP_002995962.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390289|dbj|BAH80748.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 739
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|317495495|ref|ZP_07953863.1| RelA/SpoT family protein [Gemella morbillorum M424]
gi|316914309|gb|EFV35787.1| RelA/SpoT family protein [Gemella morbillorum M424]
Length = 726
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 300/505 (59%), Gaps = 55/505 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YLS ++E++R++ A +AH+GQ R+SGEP+I+HP++VA IL EL+LD+ +I AG LHD
Sbjct: 19 YLSEEQIEIIRKSYEFAKDAHEGQFRKSGEPYILHPIQVAGILTELKLDYATICAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT TFE I++ FG + IV+G V+KL K+K ++ S +A++ R++F++
Sbjct: 79 VVEDTKY-TFEDIQQTFGEDIAVIVDG---VTKLDKVKFRSRKQS----QAENHRKLFVS 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
+ +++RVI VKLADRLHNMRT+ +M KQ I++ETL+++APLA LG+ IK ELE+
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y + Y + + K+ E EE+ K I L +K ++ K
Sbjct: 191 SLRYLHPSQYFS----IVGMMKQKRSEREESIKDACDSI--TSLLGENNIKAQVTGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++K + +++ + +R+++ + V CY LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----NSVAD-------CYATLGLVNNLWVPI 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P +KDYIA PKPN YQSLHTT+I ++ LEVQIRT EM IAE+GIAAH++ +
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK V NN N +++W I E E T+ F++++ D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
LL +++VFTP +I LPKG+ +VD+AY IH+E+GNKM+ A VN + +VL+ E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMIGATVNDKIEPFDYVLSTGEI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHA 644
+I T SK++ + WLE A
Sbjct: 449 CDIRT-----SKNSTGPKRSWLEIA 468
>gi|363899872|ref|ZP_09326379.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|395210307|ref|ZP_10399227.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
gi|361957535|gb|EHL10843.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|394704597|gb|EJF12135.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
Length = 755
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 208/563 (36%), Positives = 325/563 (57%), Gaps = 65/563 (11%)
Query: 127 PERLWEDLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE L + L + P+E L ++ +A +A E H QKR+SGEP+IIHP+ VA IL +L
Sbjct: 20 PEELLQMLLENVRSYHPSEDLSMITKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILADL 79
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
E+D E+IAAGLLHD VEDT + T + +E EF V +V+G TK+++L N N
Sbjct: 80 EMDKETIAAGLLHDVVEDTGM-TLKDLEAEFNPDVASLVDGVTKLTQL------NLNSDK 132
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+++A++LR+MF++M +++RVII+KLADRLHN+RTL + P K+ A E+L++++PLA
Sbjct: 133 VEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLAD 192
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +IK E+++LS Y E Y + +V +K +E + N I+ E + ++
Sbjct: 193 RLGISKIKIEMDDLSLKYLEPEVYYDLADKVH--FKREARE-DRINSIVE---EVREHIE 246
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ I+ K +SIYK ++ +I+++ + +RII++ + C
Sbjct: 247 ESGIEANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVE------------TVRDC 294
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTE 480
Y VLG++H ++TPIP KDYIA PKPN YQSLHTT+I PF E+QIRT
Sbjct: 295 YAVLGVIHKMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPF--------EIQIRTY 346
Query: 481 EMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQ 540
EM AE GIAAH+ + G + + ++ ++ WL+ I EWQ
Sbjct: 347 EMHRTAEFGIAAHWK----------YKEQGGSNEKATETEMS------KMKWLHEILEWQ 390
Query: 541 EEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
++ S+EF++ + D L V+ FTP G++KNLP+G+T +D+AY IH+ +GNKM
Sbjct: 391 KD---ESDSKEFMNMVKSDLSLFNENVYCFTPTGDVKNLPQGSTPIDFAYSIHSAVGNKM 447
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V AKVN LV + L N + V+IIT S+++ + WL+ K+ A++KI ++ R
Sbjct: 448 VGAKVNDKLVPIEYQLQNGDRVDIIT-----SQNSRGPSRDWLKIVKSTQAKNKINQWFR 502
Query: 659 EQAALSASEITADTVGDFVADSG 681
+ + D + +V G
Sbjct: 503 HEQKDENQDRGKDLLDKYVKAKG 525
>gi|408400921|ref|YP_006858884.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407967149|dbj|BAM60387.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 739
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
Length = 767
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 312/543 (57%), Gaps = 66/543 (12%)
Query: 126 SPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
PE+L++ L + P+ ++ ++ +A A AH Q R+SGEP+IIHP+ V IL +
Sbjct: 30 DPEQLYQALIARVRKYHPSADITMIEKAYTTAKNAHKDQARKSGEPYIIHPLWVGIILAD 89
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LE+D E+I AG+LHD VEDT++ T E + EF V +V+G V+KLG+L +
Sbjct: 90 LEMDKETIVAGMLHDAVEDTDM-TLEDVAREFSEEVALLVDG---VTKLGQLSYSQDKLE 145
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
VQ A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+A
Sbjct: 146 VQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTPAKQKEKARETMDIYAPIA 202
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK+EL++LS Y+ E Y + V DL E + E EE + ++ ++ +
Sbjct: 203 HRLGISKIKTELDDLSLKYSQPEVYNNL---VKDL-NERKTEREEFVQQIVAEVS--THM 256
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+ ++ K +SIYK ++ ++++V + +RII+ +
Sbjct: 257 KNSHIHAKVYGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIV------------DSVKD 304
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PK N YQSLHTTL+ PF E+QIRT
Sbjct: 305 CYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPSGQPF--------EIQIRT 356
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
EEM AE GIAAH+ + S GK+ A ++SWL I EW
Sbjct: 357 EEMHKTAEFGIAAHWKYK--------------ESSAGKSA---KAQEEEKLSWLRQILEW 399
Query: 540 QEEFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q + N REF+ + DL V+ FTP G++KNLP G+T VD+AY IH+ +GNK
Sbjct: 400 QRDMSDN---REFLSLLKGDLDLFAEDVYCFTPNGDVKNLPNGSTPVDFAYAIHSAVGNK 456
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV+ + + N + +EI+T S+++ + WL K+ A++KI ++
Sbjct: 457 MVGARVNGKLVNIDYKIQNGDRIEILT-----SQNSKGPSRDWLNIVKSTQAKNKINQWF 511
Query: 658 REQ 660
+ +
Sbjct: 512 KRE 514
>gi|307705368|ref|ZP_07642229.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
gi|307621073|gb|EFO00149.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
Length = 740
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 305/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V +AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKEYLTEEDVHFVHKALVYAVDCHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+E ++ ++ +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDHHLRGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + R E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+ M +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKAMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|410493960|ref|YP_006903806.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410439120|emb|CCI61748.1| K00951 GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 739
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|2498843|sp|Q54089.1|RELA_STREQ RecName: Full=Bifunctional (p)ppGpp synthase/hydrolase RelA;
Includes: RecName: Full=GTP pyrophosphokinase; AltName:
Full=(p)ppGpp synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=Stringent
response-like protein; AltName: Full=ppGpp synthase I;
Includes: RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|407881|emb|CAA51353.1| stringent response-like protein [Streptococcus dysgalactiae subsp.
equisimilis]
gi|742310|prf||2009358E stringent response-like protein
Length = 739
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
Length = 730
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 311/538 (57%), Gaps = 68/538 (12%)
Query: 130 LWEDLRPTISYLSPNEL--ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
+ EDL I Y + N + +++ +A A AH QKR SGEP+IIHPVEVA IL E+ L
Sbjct: 1 MLEDLLQKI-YENCNNINKDIIIKAYNYAENAHKEQKRISGEPYIIHPVEVACILAEMGL 59
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D +IAA LLHD +EDT+ T+E +E++F V +VEG V+KLGK+K K + ++
Sbjct: 60 DENTIAASLLHDVIEDTDY-TYEDVEKDFNIEVANLVEG---VTKLGKIKFKTK----EE 111
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+++++R+M LAMT+++RVI++KLADRLHNMRTL +M KQ A ETL ++APLA L
Sbjct: 112 QQSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMSVEKQKEKAKETLDIYAPLAHRL 171
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ +IK ELE+LS Y N +Y + R+VA+ KE E+ +E L +K+E+
Sbjct: 172 GISKIKWELEDLSLRYLNPNEYYDLVRKVAEKRKEREEYIERIIHELSEKLEE------A 225
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+K+EI K YSIY+ ++ +I+++ + +RI L + CY
Sbjct: 226 GIKSEIEGRPKHFYSIYRKMVIKNKTIDQIFDLTAIRI------------LVEDVKDCYA 273
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEM 482
VLG+VH ++ PIP KDYIA PKPN YQSLH+T+I PF E+QIRT EM
Sbjct: 274 VLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEM 325
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
+E GIAAH+ + G + ++ + + +++WL + EWQ E
Sbjct: 326 HNTSEYGIAAHWK---YKEGNLKNS---------------DKDFEAKLAWLREVLEWQRE 367
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
EF++ D+ VFVFTP+G++ NLP +T +D+AY IHT+IG++ + K
Sbjct: 368 ---TSNPEEFMEDFKIDMFSDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGK 424
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG +V + L E+VE++T + S W+ K+ A+ KI + +++
Sbjct: 425 VNGKIVPLDYHLKTGEIVEVLTSQSPKGPSI-----SWINMTKSNQAKSKIKSWFKKE 477
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 199/502 (39%), Positives = 287/502 (57%), Gaps = 54/502 (10%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
KE+ +RL + ++ I P LE + A LA +AH Q R +GEP+IIHP+ VA IL
Sbjct: 72 KEEEYKRLMDKVKTYIK--DPKSLEAIEEAYELASKAHAAQVRATGEPYIIHPLAVAYIL 129
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
ELE+D + I A LLHD VEDT T E I+ FG V +V+G V+KL + K++
Sbjct: 130 AELEMDPQGIMAALLHDVVEDTEY-TLEDIKMMFGEEVAFLVDG---VTKLSQFHYKDK- 184
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+D + ++ R+MFLAM +++RV+++KLADRLHNMRTL KQ IA ET++++AP
Sbjct: 185 ---EDQQLENFRKMFLAMAKDIRVVVIKLADRLHNMRTLGVFRREKQQRIAKETIEIYAP 241
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+Y IK ELE+L F Y + E+Y + R++ K E+ + + ++L IE+
Sbjct: 242 LAHRLGIYNIKWELEDLCFHYLHPEEYYDLVRQMKQKRKAREEIVNDTMRVLHDHIEE-- 299
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+K I K YSIYK + + ++++ + +R+I+ P
Sbjct: 300 ----AGIKATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVDTIPQ---------- 345
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
CY VLG+ H +W P+P KDYIA PKPN YQSLHTT+I + +E+QIRT EM
Sbjct: 346 --CYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTRGQP---VEIQIRTWEM 400
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
I+E G+AAH+ R GK + + +ISWL I EWQ+
Sbjct: 401 HHISEYGVAAHW-----------------RYKEGKQA--GSKDFDAKISWLRRILEWQD- 440
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
+EF++ + D+ VFVFTP+G++ NLPKG+ +D+AY IHTE+GN+ V AK
Sbjct: 441 ---TSNPKEFMNALKLDVFSDEVFVFTPKGDVINLPKGSIPIDFAYRIHTEVGNRCVGAK 497
Query: 603 VNGNLVSPTHVLANAEVVEIIT 624
VN +V L N ++V IIT
Sbjct: 498 VNNKIVPLDTKLKNGDIVSIIT 519
>gi|422758190|ref|ZP_16811952.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322411025|gb|EFY01933.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 739
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 307/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNRADVAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
SF Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 SFRYLNETEFYKISHMMKEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YS+Y+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWA--- 344
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ GL RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 345 YKKGL-----------RGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHTE+G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTEVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|346307058|ref|ZP_08849203.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
gi|345907004|gb|EGX76722.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
Length = 781
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 315/541 (58%), Gaps = 60/541 (11%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
D P++L+ L I P+ ++ + +A LA +AH QKR+SGEP+IIHP+ VA IL
Sbjct: 43 DDPDKLYGMLIARIQKYHPSADVTQIEKAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILA 102
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LE+D E+I A LLHD VEDT + + I+EEFG V +V+G V+KLG++ +
Sbjct: 103 DLEMDKETIIAALLHDVVEDTQIGE-DYIKEEFGEEVALLVDG---VTKLGRVAYSADKL 158
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
+Q A++LR+MFLAM +++RVII+KLADRLHNMRTL M P KQ A ET+ ++AP+
Sbjct: 159 ELQ---AENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTPAKQQEKARETMDIYAPI 215
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ +IK+EL++LS Y + + + ++ E E+ +++I D+
Sbjct: 216 AGRLGISKIKTELDDLSLKYLKPDVFFDLVNQINARKTEREE--------FVQQIVDEVS 267
Query: 364 LDLMT--VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
+ + +K ++ K +SIYK ++ +++++ + +RII+
Sbjct: 268 MHMKNAGIKADVNGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIV------------DS 315
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
+ CY LG++H I+TPIP KDYIA PKPN YQSLHTTL+ + + E+QIRT+E
Sbjct: 316 VKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQP---FEIQIRTQE 372
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M AE GIAAH+ + +G S +G ++SWL I EWQ
Sbjct: 373 MHKTAEYGIAAHWK-----------YKESGGSKKGVMAEEE------KMSWLRQILEWQR 415
Query: 542 EFVGNMTSREFVDTITR--DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMV 599
+ N +EF+ I DL V+ FTP+G++K LP G+T +D+AY IH+ +GNKMV
Sbjct: 416 DMSDN---KEFLSLIKGDLDLFADDVYCFTPQGDVKTLPTGSTPIDFAYSIHSAVGNKMV 472
Query: 600 AAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
A+VNG LV + + N + +EI+T S+++ + WL K+ A++KI ++ ++
Sbjct: 473 GARVNGKLVPIDYRIQNGDRIEILT-----SQNSKGPSRDWLNVVKSTQAKNKINQWFKK 527
Query: 660 Q 660
+
Sbjct: 528 E 528
>gi|329767283|ref|ZP_08258809.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
gi|328836205|gb|EGF85875.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
Length = 725
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 305/522 (58%), Gaps = 55/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL +++ +R+A A AH+GQ R+SGEP+I+HPV+VA IL EL+LD+ +I AG LHD
Sbjct: 19 YLPEEQIKTIRKAYEFAKVAHEGQFRKSGEPYILHPVQVAGILTELKLDYATICAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT TF+ I+E FG + IV+G V+KL K+K +++ S +A++ R++F++
Sbjct: 79 VVEDTKY-TFDDIKETFGEDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
+ +++RVI VKLADRLHNMRT+ +M KQ I++ETL+++APLA LG+ +K ELE+
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIYAPLAHRLGISSVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y + Y + + K+ EE+ K I L +K ++ K
Sbjct: 191 SLRYLHPSQYFS----IVGMMKQKRSAREESIKDACSSI--TSILAENNIKAQVTGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++K + +++ + +R+++ V CY LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P +KDYIA PKPN YQSLHTT+I ++ LEVQIRT EM IAE+GIAAH++ +
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK V NN N +++W I E E T+ F++++ D
Sbjct: 348 ---------------EGKKVNKNN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
LL +++VFTP +I LPKG+ +VD+AY IH+E+GNKMV A VN + +VL+ E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMVGATVNDKIEPFDYVLSTGEI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+I T SK++ + WLE A++ + KI F ++ A
Sbjct: 449 CDIRT-----SKNSTGPKRSWLEIARSSQTKSKIKAFFKKAA 485
>gi|322517601|ref|ZP_08070469.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
gi|322123766|gb|EFX95344.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
Length = 739
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV A A +AH GQ R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEEAWHYATDAHSGQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+SF Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 MSFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G +++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 347 ----------------KGIKSKVDSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPNGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 313/559 (55%), Gaps = 63/559 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E + + RA+ A EAH GQ R SGEP+I HP+ VA IL +L++D +I A LLHD VEDT
Sbjct: 18 EADQIIRAIEFADEAHRGQSRASGEPYIAHPLAVAGILADLKMDTPTIVAALLHDVVEDT 77
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
T IE FG V ++V+G TK+ +L E + ++ +A++LR+MFLAM +++
Sbjct: 78 -AYTLADIESRFGTEVAQLVDGVTKLDRL-------EVRTQEEEQAENLRKMFLAMAKDI 129
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL H+P + + IA ET++++APLA LG+++IK ELE+L+F Y
Sbjct: 130 RVILIKLADRLHNMRTLKHLPQDRVTRIAKETMEIYAPLAHRLGIFRIKWELEDLAFQYL 189
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
Y ++K VA + +E E A ++++++D LD + +E+ K YSIY
Sbjct: 190 QPAAYQEMKELVA----KKRQEREAAVDAVIQELKDR--LDASGMVSEVSGRAKHLYSIY 243
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + K ++ + +R++++ + CY VLGLVH +W P+P K
Sbjct: 244 QKMHKQGKDFGQIYDLVAVRVLVESV------------KDCYAVLGLVHSLWKPVPGRFK 291
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQSLHTT+I E LEVQIRT EM AE GIAAH+
Sbjct: 292 DYIAMPKSNLYQSLHTTVIGPHGEP---LEVQIRTFEMHHTAEYGIAAHW---------- 338
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
R G + + + ++SWL + EWQ + + EF++T+ DL
Sbjct: 339 -------RYKEGSSKA--DRDFEQKLSWLRQLLEWQRDM---RDAAEFMETLKVDLFSDE 386
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G++ +LP GAT VD+AY IHT+IG+ V AKVNG +V L + ++VEI+
Sbjct: 387 VFVFTPKGDVIDLPAGATPVDFAYRIHTDIGHHCVGAKVNGRIVPLATPLESGDIVEILV 446
Query: 625 -----------YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
N + + A R +QWL + + + + + S ++ + +
Sbjct: 447 NRKSPGPSVDWLNIVRTSQAKTRIRQWLRRERRQEHLARGQEIWERELKRSGLTVSPERL 506
Query: 674 GDFVADSGEESEVEDLSDG 692
GD V G S ++DL G
Sbjct: 507 GDMVRRLGYNS-LDDLMVG 524
>gi|307707439|ref|ZP_07643921.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
gi|307616391|gb|EFN95582.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
Length = 716
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 301/515 (58%), Gaps = 55/515 (10%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
+ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G LHD VEDT+
Sbjct: 1 MAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGFLHDVVEDTD 60
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M +AM+E++R
Sbjct: 61 A-TLDDLEREFGPDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKMLMAMSEDIR 112
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K ELE+LSF Y N
Sbjct: 113 VILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWELEDLSFRYLN 172
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++ K+ + + +E E ++E ++ K+E ++ +K +I K YSI++
Sbjct: 173 PTEFYKITHMMKEKRREREALVDE----VVTKLE--EYTTDRHLKGKIYGRPKHIYSIFR 226
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ R E+ + +R I+ Q Y +LG VH +W P+P KD
Sbjct: 227 KMQDKRKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELWKPMPGRFKD 274
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++ + + G V
Sbjct: 275 YIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAYKKGIKGQV- 329
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
N+ A+ ++W+ + E Q++ ++EFVD++ + L +
Sbjct: 330 ----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSVKENYLAEEI 370
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
+VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L + VEI+T
Sbjct: 371 YVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKTGDQVEIVT- 429
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ ++F + WL KT AR+KI +F + Q
Sbjct: 430 ----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 460
>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|355621474|ref|ZP_09046124.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|354823569|gb|EHF07899.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
Length = 761
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 316/538 (58%), Gaps = 56/538 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SPE+L+++L I P +++ +V +A +A+ AH QKRRSGEP+IIHP+ VA IL +
Sbjct: 22 SPEKLYQELIAGIRKYHPSDDITMVEKAYDIAYNAHKEQKRRSGEPYIIHPLCVAIILAD 81
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AG+LHD VEDT V+T E + FG V +V+G TK++++ K E
Sbjct: 82 LELDKETIVAGILHDVVEDT-VMTEEELTSIFGEEVALLVDGVTKLTQISWSMDKVE--- 137
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ A ET+ ++AP+A
Sbjct: 138 ---IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYAPIA 194
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK+EL++LS Y E Y ++ +VA L K+ + + +K +D
Sbjct: 195 DRLGISKIKTELDDLSLKYLEPEVYYELAEKVA-LRKDAREAFVQGIVFEVKSHMED--- 250
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ ++ K +SIYK ++ ++ ++ + +RI+++ +
Sbjct: 251 --AGIEAKVDGRVKHFFSIYKKMVNQDKTLEQIYDLFAVRIVVE------------TVKD 296
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY LG++H ++ PIP KDYIA PKPN YQSLHTTLI S E+QIRT EM
Sbjct: 297 CYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIS---SSGQPFEIQIRTFEMHR 353
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
AE GIAAH+ + G ++ S K +SWL I EWQ +
Sbjct: 354 TAEYGIAAHWKYKE-----SGSSKSATDSAEAK------------LSWLRQILEWQRDMS 396
Query: 545 GNMTSREF--VDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
N +EF + DL V+ FTP G++KNLP G+T +D+AY IH+ +GNKMV A+
Sbjct: 397 DN---KEFLSLLKSDLDLFTDNVYCFTPTGDVKNLPSGSTPIDFAYSIHSAVGNKMVGAR 453
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV+ +V+ N + +EIIT S+++ + WL+ K+ A++KI ++ + +
Sbjct: 454 VNGKLVNIDYVIQNGDRIEIIT-----SQNSKGPSRDWLKLVKSTQAKNKINQWFKTE 506
>gi|406658950|ref|ZP_11067090.1| GTP diphosphokinase [Streptococcus iniae 9117]
gi|405579165|gb|EKB53279.1| GTP diphosphokinase [Streptococcus iniae 9117]
Length = 739
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 306/523 (58%), Gaps = 56/523 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+S ++ V+ AL A AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 GYMSESDAAFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T IE +FG VR I++G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLADIETDFGKDVRDIIDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVC 377
LSF Y N ++ ++ + + +E E ++E +KI+ E + D +
Sbjct: 190 LSFRYLNETEFYRISHLMTEKRREREALVDEIVDKIMTYTNEQGLYGD-------VYGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ + + +++ + +R +++ Q Y ++G +H +W
Sbjct: 243 KHIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWR 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 291 PMPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK 346
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G V N + + ++W+N + E Q+ N +++FV+++
Sbjct: 347 KGIKGKV-----------------NQDDQKVGMNWINELVELQD--ASNGDAKDFVNSVK 387
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
++ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 388 EEIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTG 447
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VVEI+T + S+F + W++ KT AR+KI +F + Q
Sbjct: 448 DVVEIVT-----NPSSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|357419457|ref|YP_004932449.1| (p)ppGpp synthetase I SpoT/RelA [Thermovirga lienii DSM 17291]
gi|355396923|gb|AER66352.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovirga lienii DSM 17291]
Length = 775
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 298/521 (57%), Gaps = 58/521 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +L A + A AHDGQ R S EP+++HP+ VA IL E+ELD ++ A LLH
Sbjct: 65 SYLSKEDLIKCGEAFVFAALAHDGQFRLSKEPYVVHPIRVAAILAEMELDVNTLEAALLH 124
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+V T E + +FG V +V+G V+KLGK+ K S +D +A++LR+MFL
Sbjct: 125 DVLEDTSV-TPEELSNKFGRDVLLLVDG---VTKLGKITFK----SFEDYQAENLRKMFL 176
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
M ++VRV+++KLADRLHNM+T+ ++ KQ IA ETL+++APLA LG+YQIK ELE+
Sbjct: 177 VMAKDVRVVLIKLADRLHNMKTIQYLRMDKQIRIAKETLEIYAPLAHRLGIYQIKRELED 236
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F + E Y ++RRV E E+ +++A IL KK+ + M +K I K
Sbjct: 237 AAFKIADPEAYYDIRRRVKKKLPEREEIIKQAMTILEKKLNE------MGIKAHITGRAK 290
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S+ E+ + LR+I+ CY VLG+VH IW P
Sbjct: 291 HFYSIYEKMRRKNLSLEELFDLLALRVIVDDVAT------------CYTVLGVVHTIWKP 338
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P DYIA PK N YQSLHT +I E LEVQIRT +M +AE G+A+H+
Sbjct: 339 LPGQFDDYIANPKSNMYQSLHTAVIGPSGEP---LEVQIRTWDMHWLAEYGVASHW---- 391
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
R GK + ++SW+ E Q E EF++ +
Sbjct: 392 -------------RYKEGKQKL---DELDQKLSWIRQALETQAE---TSEPSEFLEHLKA 432
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+L S VFVFTP+G++ +LP G+T +D+AY IHTE+GNK + A VN +V + L N +
Sbjct: 433 DVLSSEVFVFTPKGDVISLPAGSTPLDFAYTIHTEVGNKFIGAMVNNRIVPIDYELQNGD 492
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+V+I+T + + WL AK+ A+ KI + R+
Sbjct: 493 IVKILT------SPHGKPSRDWLNIAKSSRAKSKIRSYFRQ 527
>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 702
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 203/517 (39%), Positives = 303/517 (58%), Gaps = 58/517 (11%)
Query: 143 PNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVE 202
P E +++ RA E H GQ R+SGEP++IHP+EVA+ L EL +D ++ AGLLHDT+E
Sbjct: 20 PEERDIIHRAFEFVSEKHSGQLRKSGEPYVIHPLEVAKTLAELNMDSTTVIAGLLHDTLE 79
Query: 203 DTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTE 262
DT+ T+E IEE FG V IVEG V+K+GK+K KN +++ +A++ R++ LA +
Sbjct: 80 DTDT-TYEEIEELFGKDVADIVEG---VTKIGKIKFKN----LREAQAENFRKLILATAK 131
Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
++RV++VKLADRLHNM+TL+H+ K+ IA ETL+V+AP+A LG+++IK LE+LSF
Sbjct: 132 DIRVVVVKLADRLHNMKTLNHLRRDKRIRIAEETLEVYAPIAHRLGIWEIKRSLEDLSFK 191
Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
Y ++Y +V++ V+ ++ E L+ K ++ K+ ++ + +K E+ K YS
Sbjct: 192 YLYPKEYERVRKFVSQSLEDLEVYLK---KFVIPKVREE--IKKAGIKAEVTYRPKHLYS 246
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
I++ ++ + EV+ + +RII+ Q CY VLGL+H ++ P+P
Sbjct: 247 IWQKTIRKNIGLEEVHDLLGVRIIV------------DTIQECYVVLGLIHSLFKPVPGK 294
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
KDYI+ PKPN YQSLHTT++ +E QIRT EM L AERGIAAH+
Sbjct: 295 FKDYISLPKPNLYQSLHTTVVA---PKGRMVEFQIRTREMHLRAERGIAAHW-------- 343
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
A GR + SWL R E G+ E +D + R+L
Sbjct: 344 ----AYKEGRERVQEEEVF---------SWL---RSLVENIQGSKNPSEVLDNLKRELFS 387
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
VFVFTP+G++ LP GAT +D+AY IHTE+GN AKVNG +V + L + + VEI
Sbjct: 388 EEVFVFTPKGDLIVLPVGATPIDFAYHIHTEVGNHCAGAKVNGRIVPLNYRLQSGDQVEI 447
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
IT A + + WL+ T A+++I ++R+
Sbjct: 448 IT------SPAKKPNPDWLKFVVTSRAKNRIKHYIRQ 478
>gi|262283461|ref|ZP_06061227.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
gi|262260952|gb|EEY79652.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
Length = 738
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD ++A G
Sbjct: 16 TRKYLAAEDVAFVQKALVYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ + + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-SLDDLEREFGPDVRTIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE ++ KIE + + +I
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVSKIE--TYAAERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I++ +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q E + ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIQELMELQAE---SGDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G ++ LPK + +D+AY IHT++G + AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SANSFGPSRDWIGLVKTSKARNKIRQFFKNQ 484
>gi|417753006|ref|ZP_12401162.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333771103|gb|EGL48067.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 739
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQRLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|385263022|ref|ZP_10041119.1| GTP diphosphokinase [Streptococcus sp. SK643]
gi|385188997|gb|EIF36467.1| GTP diphosphokinase [Streptococcus sp. SK643]
Length = 740
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 306/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLS ++ V +AL+ A E H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TQKYLSEEDVAFVHKALVYAVECHSGQYRKSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ + + +E FG VR IV+G V+KLGK++ K S+++ A++ R+M
Sbjct: 76 LHDVVEDTDA-SLDDLERVFGHDVRVIVDG---VTKLGKVEYK----SLEEQLAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKL+DRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISKETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E ++E ++ K+ED + + +I
Sbjct: 188 EDLSFRYLNPTEFYKITHMMKEKRREREALVDE----VVTKLED--YTSERHLTGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSI++ + + E+ + +R I+ Q Y +LG VH +W
Sbjct: 242 PKHIYSIFRKMQDKKKRFEEIYDLIAIRCIL------------DTQSDVYAMLGYVHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ ++EFVD++
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---ADDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEI+T + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIVT-----NPNSFGPSRDWLNMVKTSKARNKIRQFFKNQ 484
>gi|366089230|ref|ZP_09455703.1| GTP pyrophosphokinase [Lactobacillus acidipiscis KCTC 13900]
Length = 744
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 203/548 (37%), Positives = 310/548 (56%), Gaps = 64/548 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y++ + LV++A A H Q R+SGEP++IH ++VA IL +L++D ++ AG LH
Sbjct: 18 DYMNQEHVALVQKACDFATYVHKEQVRKSGEPYVIHSIQVAGILADLKMDPATVCAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T + E FG V+ IV+G TK+SK+ + S Q+ +A++ R++ L
Sbjct: 78 DVVEDTEV-TLGDVGELFGKDVQIIVDGVTKLSKIKYI-------SHQEAQAENHRKLLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVIIVKLADRLHNMRTLSH+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 130 AMSQDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIYAPLADRLGISTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y N + Y ++ + E K +E+ + + K I D LDL EI K
Sbjct: 190 TSLRYLNPQQYYRIVHLMNSKRTERLKYIEQVIEQIKKAIAD---LDL---NCEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + ++ + +R+++K + CY VLG +H W P
Sbjct: 244 HIYSIYRKMRDQHKQFEQIYDLIAIRVVVKSI------------KDCYAVLGAIHTRWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+P KDYIA PK N YQSLHTT++ PF EVQIRTEEM +AE GIAAH
Sbjct: 292 MPGRFKDYIAMPKANMYQSLHTTVLGPAGRPF--------EVQIRTEEMHQVAEYGIAAH 343
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + GK +N+ + ++++ I E+Q E + + +F+
Sbjct: 344 WAYK-----------------EGKKDAVNSTDTGEKLNFFKEILEFQNE---SEDANDFM 383
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+++ DL RV+VFTP+G++ LPKG+ +D AY IHTEIG+ AKVNG +V +
Sbjct: 384 ESVKGDLFSDRVYVFTPKGDVLELPKGSVPLDMAYSIHTEIGHHTTGAKVNGKIVPLNYQ 443
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
+ N ++V+I+T S+++ + WL+ T AR+KI +F +++ + D +
Sbjct: 444 IKNGDIVDILT-----SQNSAGPSQDWLDLVHTNKARNKIRRFFKQRDRTENIDTGRDVL 498
Query: 674 GDFVADSG 681
+ + D+G
Sbjct: 499 QNSLVDAG 506
>gi|428221859|ref|YP_007106029.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
gi|427995199|gb|AFY73894.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 7502]
Length = 752
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/507 (40%), Positives = 292/507 (57%), Gaps = 50/507 (9%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V +A LA++ H GQ R SGEP+I+HP++VA +L +L IAAG LHD VEDT+V
Sbjct: 46 DIVCQAFKLAYKLHQGQTRASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTSV 105
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T IE +FGA VR++VEG TK+SK+ K E +A++ R+MFL M E++RV
Sbjct: 106 -TLAEIEAQFGAEVRQLVEGVTKLSKIN-FNSKTER------QAENFRRMFLYMAEDIRV 157
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I+VKLADRLHNMRTL H+ PHKQ IA ET +FAPLA LG+ Q K ELE+L+F Y A
Sbjct: 158 IVVKLADRLHNMRTLEHLAPHKQVLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEA 217
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
E Y ++K VA+ + E + EA +IL +I+ + E+ K Y IY+
Sbjct: 218 EQYREMKALVAETRSDREARITEAVEILRSRIQ-----KIGITGFEVTGRPKHLYGIYEK 272
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+ + + E+ IA +R+I+ + CY +L + H + P+P KDY
Sbjct: 273 MHRQQKPYGEIYDIAAVRVIV------------NNTDECYRILAIAHDCFRPVPGRFKDY 320
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
IA PKPNGYQSLHT +I + LEVQIRT EM +AE GIAAH+ + +
Sbjct: 321 IALPKPNGYQSLHTAVISPDGQP---LEVQIRTWEMHHVAEYGIAAHWKYK------ESN 371
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ PN LNN N + + +WL + E Q++ + +E+++++ +DL +F
Sbjct: 372 SNPNSNG------GLNN-NDSEKFNWLRQMVESQKDIKDD---QEYIESLKQDLFNDEIF 421
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VFTP+G++ LP+G+T VD+AY IHTE+GN A VN +VS L N + V I+ N
Sbjct: 422 VFTPKGDVHCLPRGSTPVDFAYRIHTEVGNHCAGALVNQRMVSLDRKLQNGDTVTILRQN 481
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKI 653
W+ T +A+++I
Sbjct: 482 NAHPSL------DWINFVATSTAKNRI 502
>gi|256851206|ref|ZP_05556595.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260660630|ref|ZP_05861545.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
gi|256616268|gb|EEU21456.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260548352|gb|EEX24327.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
Length = 747
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/521 (38%), Positives = 296/521 (56%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V RA A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 22 YMNKEQLAFVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHD 81
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+ EFG V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 82 TVEDTSV-TNDDIKREFGEDVAFIVDGVTKLNKY-------EYKSHEEFLAENHRKMLIA 133
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ETL ++APLA LG+ IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDM 193
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N E Y + ++ E E +E A L LD + +K +I K
Sbjct: 194 SLHYLNPEAYYNIVNQMNSKRSEREGYIETAIAYLKDT------LDSLHIKYDIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I++ + CY VLG VH W P+
Sbjct: 248 IYSIYKKMVNKHKDFSEIFDLLAVRVIVQ------------NVRDCYAVLGAVHTKWKPM 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I ++ LE+QIRT++M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAVPKANGYQSLHTTIIGPGGKT---LEIQIRTQQMHEVAEYGVAAHWAYK-- 350
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+G T + + ++ I E ++E + EF+ ++ D
Sbjct: 351 ---------------KGDTQAVEATSAGRKLDMFREILELKDE---TSNADEFMKSVKSD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ V+VFTP+G++ L KG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 393 IFSDSVYVFTPKGDVYELAKGSVPLDFAYAIHTQVGSHAVGAKVNDKLVPLDYRLKNGDV 452
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V I+T +S + W+ KT AR+KI +FL+EQ
Sbjct: 453 VSILT------QSNAEPSPDWMNMVKTSRARNKIRRFLKEQ 487
>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
Length = 729
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 206/537 (38%), Positives = 305/537 (56%), Gaps = 67/537 (12%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I N + +++ +A A AH QKR SGEP+IIHPVEVA IL E+ LD
Sbjct: 1 MLEDLLQKIDENCNNVDKDIIIKAYNYAKNAHKKQKRISGEPYIIHPVEVACILAEMGLD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAA LLHD +EDT+ T+E +E +F + V +VEG V+KLGK+K K + ++
Sbjct: 61 ENTIAASLLHDVIEDTDY-TYEDVERDFNSEVANLVEG---VTKLGKIKFKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+++++R+M LAMT+++RVI++KLADRLHNMRTL +M KQ A ETL ++APLA LG
Sbjct: 113 QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ ++K ELE+L+ Y N +Y + R+VA+ KE E+ +E L +K LD
Sbjct: 173 ISKVKWELEDLALRYLNPNEYYDLVRKVAEKRKEREEYIERIIHELKEK------LDEAG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K+EI K YSIY+ ++ +I+++ + +RI L + CY V
Sbjct: 227 IKSEIEGRPKHFYSIYRKMVIKNKTIDQIFDLTAVRI------------LVEDVKDCYAV 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+VH ++ PIP KDYIA PKPN YQSLH+T+I PF E+QIRT EM
Sbjct: 275 LGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+E GIAAH+ + N ++ + +++WL + EWQ E
Sbjct: 327 YTSEYGIAAHWKYK--------EGEKN-----------SDKDFEAKLAWLREVLEWQRE- 366
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF++ D+ VFVFTP+G++ NLP +T +D+AY IHT+IG++ + KV
Sbjct: 367 --TSNPEEFMEDFKIDMFSDEVFVFTPKGDVINLPSDSTPIDFAYRIHTDIGHRCIGGKV 424
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L E+VE++T S WL K+ A+ KI + +++
Sbjct: 425 NGRIVPLDYHLKTGEIVEVLTSPTPKGPSI-----SWLNMTKSNQAKSKIKSWFKKE 476
>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
Length = 465
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 298/527 (56%), Gaps = 68/527 (12%)
Query: 130 LWEDLRPTISY-LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+ EDL I Y + E+E +++A A AH QKR SGEP+I HP EVA IL E+ +D
Sbjct: 1 MLEDLMIKIKYSFTEKEIEFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMD 60
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
++ AGL+HD VEDT T+E + +EFG V +V G V+KLGK++ K + ++
Sbjct: 61 VNTMIAGLMHDVVEDTQY-TYEDVAKEFGNEVADLVNG---VTKLGKIEYKTK----EEQ 112
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+AD++R+M LAMT+++RVI++KLADRLHNMRTL MP KQ A ETL ++APLA LG
Sbjct: 113 QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLG 172
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ +IK ELE+LSF Y N +Y + R++A+ E E+ ++E L Q L
Sbjct: 173 ISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEHIKEIISNL------QQNLKRSG 226
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+++EI K YSIYK + +++++ + +RI L + CY
Sbjct: 227 IESEIDGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRI------------LVDTVKDCYAA 274
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG+ H ++ PIP KDYIA PKPN YQSLH+T++ PF E+QIRT EM
Sbjct: 275 LGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPF--------EIQIRTYEMH 326
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + K N+ NI L+++WL + +WQ+E
Sbjct: 327 KTAEYGIAAHW--------------------KYKEDVENSNNIDLKLTWLREMLDWQKE- 365
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ DL VFVFTP+G++ +LP AT VD+AY IHT+IG++ + AKV
Sbjct: 366 --TTDPEEFMQGFKIDLFSDEVFVFTPKGKVISLPNKATPVDFAYKIHTDIGHRCIGAKV 423
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSAR 650
NG +V + L E++E++T S + + WL K+ A+
Sbjct: 424 NGKMVPLDYELKTGEIIEVLT-----STTPKGPNLDWLSMVKSNQAK 465
>gi|389577382|ref|ZP_10167410.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium cellulosolvens
6]
gi|389312867|gb|EIM57800.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium cellulosolvens
6]
Length = 777
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 311/541 (57%), Gaps = 65/541 (12%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
SP+ L+ L ++ P +++ ++ +A +A +AH GQKR+SGE +IIHP+ V IL +
Sbjct: 41 SPDELYRTLISSVRKYHPSDDISMIEKAYKIASDAHQGQKRKSGEDYIIHPLCVGIILAD 100
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I +GLLHD VEDT ++T E I +FG V IV+G TK+ +L K K E
Sbjct: 101 LELDKETIVSGLLHDVVEDT-IMTKEEIAGQFGNEVAEIVDGVTKLGQLNYSKDKVEE-- 157
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
+A++LR+MFLAM +++RVI+VKLADRLHNMRTL +M P KQ A ET+ +++P+A
Sbjct: 158 ----QAENLRKMFLAMAKDIRVIMVKLADRLHNMRTLKYMRPEKQLEKARETIDIYSPIA 213
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
+ LG+ ++K+EL++LS Y Y + R++ E + + + KKI+D
Sbjct: 214 QRLGITKVKNELDDLSLKYLEPAAYYDLVRQINGKKSERTAFVAQIVDDVKKKIDD---- 269
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
++ +I K +SIYK ++ +++++ + +RII++ +
Sbjct: 270 --AGLEAQISGRAKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVE------------TVRD 315
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRT 479
CY LG++H ++TPIP KDYIA PKPN YQSLHTTLI PF E+QIRT
Sbjct: 316 CYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLIGPQGKPF--------EIQIRT 367
Query: 480 EEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW 539
+M +AE GIAAH+ + G P + LN WL I EW
Sbjct: 368 FDMHRVAEYGIAAHWKYKEASDG-------KKTGPEQEEEKLN---------WLRQILEW 411
Query: 540 QEEFVGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
Q++ N REF+ + D L V+VF+P G++K LP G+ +D+AY +H+ +GN+
Sbjct: 412 QQDMSDN---REFMSLLKSDLNLFNENVYVFSPAGDVKTLPAGSCTIDFAYAVHSAVGNR 468
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
MV A+VNG LV L N + VE++T S+++ + WL+ K+ A+++I ++
Sbjct: 469 MVGARVNGKLVPIETELHNGDRVEVVT-----SQNSHGPSRDWLKVVKSTMAKNRINRWF 523
Query: 658 R 658
R
Sbjct: 524 R 524
>gi|154482685|ref|ZP_02025133.1| hypothetical protein EUBVEN_00361 [Eubacterium ventriosum ATCC
27560]
gi|149736461|gb|EDM52347.1| RelA/SpoT family protein [Eubacterium ventriosum ATCC 27560]
Length = 759
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 306/544 (56%), Gaps = 69/544 (12%)
Query: 126 SPERLWEDLRPTISYLSPN--ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+PE L+ L I P+ +L + +A A ++H QKR+SGEP+IIHP+ A IL
Sbjct: 25 TPEELYSRLIDKIKRYHPSAGDLSAIDKAYNFAKKSHGDQKRKSGEPYIIHPIHTALILA 84
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+LELD ESI AGLLHD +EDT V T E++ EFG V +V+G TK++KL K E
Sbjct: 85 DLELDKESIMAGLLHDVMEDTKV-TREQMISEFGEEVTDLVDGVTKLTKLDYDADKVEK- 142
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
+A++LR+MFLAM +++RVI++KLADRLHNMRTL +M P KQ + ET++++AP+
Sbjct: 143 -----QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTPEKQKEKSKETMEIYAPI 197
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ +IK EL++L+ Y E Y + V L EH +E L+ ++ +
Sbjct: 198 ADRLGISKIKIELDDLALRYLEPEKYKDLVDGVH-LRLEHREEFMSQ---LIAEVAG--Y 251
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
++ +K I K +SIYK ++ +++++ + +RII+
Sbjct: 252 IEKAGIKATIDGRVKHYFSIYKKMVNQHKTLDQIYDVFAIRIIV------------DTVM 299
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIR 478
CY LG++H +TP+P KDYIA PK N YQSLHTTLI PF E+QIR
Sbjct: 300 ECYGALGVIHEKYTPVPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPF--------EIQIR 351
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + +TG N +ISWL I E
Sbjct: 352 TMEMHKTAEYGIAAHWKYKENITG-------------------EGDNEEQKISWLRQILE 392
Query: 539 WQEEFVGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGN 596
WQ + N EF++ + DL V+ FTP G++K+LP G+T +D+AY IH+ +GN
Sbjct: 393 WQRDLSDN---HEFLNLLKDDLNMFSENVYCFTPNGDLKSLPNGSTPIDFAYSIHSAVGN 449
Query: 597 KMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKF 656
KMV A+VNG +V+ + + N + VE++T N + S WL+ K+ A++KI ++
Sbjct: 450 KMVGARVNGKMVNIDYKIQNGDQVEVVTSNNSNGPSM-----DWLKIVKSTQAKNKINQW 504
Query: 657 LREQ 660
+ Q
Sbjct: 505 FKLQ 508
>gi|386316165|ref|YP_006012329.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|323126452|gb|ADX23749.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 739
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 305/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|417927861|ref|ZP_12571249.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765735|gb|EGR88261.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 739
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 305/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|172058098|ref|YP_001814558.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sibiricum 255-15]
gi|171990619|gb|ACB61541.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sibiricum 255-15]
Length = 732
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 304/525 (57%), Gaps = 59/525 (11%)
Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
+ Y++ E++ + RA A + H+GQ RRSGEP+IIHPV+VA IL ++ LD +I A LL
Sbjct: 17 VEYMTEAEVKDIERAYQFAKDEHEGQFRRSGEPYIIHPVQVAGILVDIGLDATTIVAALL 76
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD VEDT++ T E + E FGA V +V+G V+KLGK+K K++ + A++ R+MF
Sbjct: 77 HDVVEDTDI-TLEELTERFGADVAMLVDG---VTKLGKIKYKSKREEL----AENHRKMF 128
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
+AM E++RVI++KLADRLHNMRTL HM KQ A ETL++FAPLA LG+ IK ELE
Sbjct: 129 IAMAEDIRVILIKLADRLHNMRTLQHMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELE 188
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRS 375
++S Y N + Y R+ + K+ E E L+ + D ++ L+ + + E+
Sbjct: 189 DISLRYINPQQYY----RIVSMMKQKRTEREA----LVTSVIDEVNEVLEEVEIAAEVDG 240
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
K YSIY + S+ +E+ + +RII+ + CY VLG++H
Sbjct: 241 RPKHIYSIYNKMQNSKKEFSEIYDLMAVRIIV------------DSIKDCYAVLGIIHTQ 288
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
+ P+P KDYIA PKPN YQSLHTT+I E LEVQIRT +M IAE GIAAH+
Sbjct: 289 YKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTRDMHFIAEYGIAAHW- 344
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
A G+ K+ +I+ I E Q++ + EF+++
Sbjct: 345 -----------AYKEGKEQEAKS------GFEDKIAHFREILELQKD---TADAEEFMES 384
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D ++VFTP+G++ LPKG+ +DYAY IHTEIG++ + AKVNG +V + L
Sbjct: 385 VKVDFFSDMLYVFTPKGDVIELPKGSVPIDYAYRIHTEIGHRTIGAKVNGRMVPIDYKLK 444
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ K WL+ + A++KI ++ + Q
Sbjct: 445 TGDIIEIVT-----SKHSYGPSKDWLKICVSSQAKNKIRQWFKRQ 484
>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
Length = 760
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/521 (38%), Positives = 303/521 (58%), Gaps = 59/521 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+ +L + AL+ A AH Q+R SGEP+++H + VA IL ++ELD +++ A LLHD
Sbjct: 54 YMDRQDLMKLGEALVFAANAHRDQRRHSGEPYVVHSISVAAILADMELDVDTLCAALLHD 113
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT + E ++ FG V +V+G V+KLGKL K S++D +A++LR+MFL
Sbjct: 114 VLEDTEIGK-EEMQSRFGEDVVTMVDG---VTKLGKLAFK----SMEDYQAENLRKMFLV 165
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRTL KQ +IA ETL+++APLA LG+Y +K ELE+L
Sbjct: 166 MAKDIRVVLIKLADRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDL 225
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
F E Y +++RRV E E +++A +L +K++++ ++ + K
Sbjct: 226 CFKILEPEIYYEIRRRVRKKLPEREAIIKQALDVLQQKLKEE------GIEASLSGRPKH 279
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + S+ ++ + LR++ VG + CY VLGLVH IW PI
Sbjct: 280 FYSIYEKMRRKNLSLEQLYDLLALRVV--------VGTVAE----CYQVLGLVHTIWKPI 327
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P DYIA PK N YQSLHTT+ L S LEVQIRT EM +AE GIAAH+
Sbjct: 328 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHWLAEYGIAAHW----- 379
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
H + R I ++SW+ + E Q+E + EF+D + D
Sbjct: 380 ------HYKEGKR---------RVDQIDQKLSWIRQVLESQQEG----SPSEFLDNLKTD 420
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+L S V VFTP+G++ +LP G+T +D+AY IHTE+G+K V A VNG +V + L+N ++
Sbjct: 421 VLTSEVLVFTPKGDVVSLPNGSTPIDFAYAIHTEVGHKCVGAMVNGRIVPMDYKLSNGDI 480
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V ++T + + WL+ A++ R+KI + R+Q
Sbjct: 481 VRVLT------SPQGKPSRDWLKIARSNRTRNKIKSYFRQQ 515
>gi|259503164|ref|ZP_05746066.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
gi|259168879|gb|EEW53374.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
Length = 745
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 299/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV RA A H Q+R+SGEP+IIHP++VA IL L++D E
Sbjct: 10 EDVQKMVSSYMNAEHVALVERAYRFAEVCHHDQRRKSGEPYIIHPIQVAGILANLQMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++AAG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVAAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIQYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + + + K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSINRSIKLIKKAISD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YSIY+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVV------------DTIKDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT M +AE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKANGYQSLHTTIIG---PEGRPLEVQIRTHHMHQVAEFGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTDGVQQTRDSQKLNIVKEILEMRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKGA +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T ++ + S + WLE TR AR+KI F R
Sbjct: 443 DYEIKNGDIVDILTSSSSAGPS-----RDWLELVSTRRARNKIRSFFR 485
>gi|421766534|ref|ZP_16203306.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
DCC43]
gi|407625044|gb|EKF51769.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
DCC43]
Length = 741
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 303/522 (58%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ LVR+AL A AH Q R SGEP+IIHP++VA IL +L+LD +++AG LH
Sbjct: 18 AYMNEKDILLVRKALKCASIAHAEQYRASGEPYIIHPIQVAGILAKLQLDAVTVSAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDTN + + +E FG + IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTNFIQSDLVEL-FGEEIANIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL ++ P KQ I++ET+ ++APLA LG+ IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIYAPLAHRLGIGSIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y N ++ +++ + + E + E L ++++D Q V EI K
Sbjct: 190 LSFRYLNETEFYRIRGLMNEKRAARENLVSEVIDKLNERMKDAQ------VDAEIYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +E+ + +R C L Y LG +H +W P
Sbjct: 244 HIYSIYRKMHDKKKRFDEIYDLIAIR-------C-----LTDSTSDVYTTLGYIHDLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKANGYQSVHTT----VYGPKGPMEFQIRTHEMHQIAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G+ ++ I+ ++W+N + E QE+ ++ EFV +
Sbjct: 347 ----------------QGRKAKVDVHEISETLNWINELVELQEQ--SGDSAEEFVKAVQE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+LG +++VFTP G ++ LP G+ +D+AY IHT++G+ AK+N + +VL +
Sbjct: 389 DILGDKIYVFTPTGAVQELPAGSGPIDFAYAIHTQVGDHATGAKINERMQPLNYVLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEIIT SK++F + W++ KT AR+KI +F + Q
Sbjct: 449 KVEIIT-----SKTSFGPSRDWIKLVKTNKARNKIKQFFKSQ 485
>gi|157150146|ref|YP_001451091.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
CH1]
gi|157074940|gb|ABV09623.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 738
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YL+ ++ V++AL+ A + H GQ R+SGEP+I+HP++VA IL +L+LD ++A G
Sbjct: 16 TRKYLAAEDVAFVQKALVYAVDCHSGQFRKSGEPYIVHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-GLDDLEREFGPDVRTIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E +EE ++ KIE + + +I
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREALVEE----VVSKIE--TYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I++ +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCILE-----------TPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V ++ A+ ++W+ + E Q E + ++EFVD++
Sbjct: 346 KKGIKGKV-----------------DSKESAIGMNWIQELMELQAE---SGDAKEFVDSV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
+ L ++VFTP G ++ LPK + +D+AY IHT++G + AKVNG +V T L
Sbjct: 386 KENYLAEEIYVFTPDGSVRALPKDSGPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----SANSFGPSRDWIGLVKTSKARNKIRQFFKNQ 484
>gi|227513277|ref|ZP_03943326.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
gi|227083478|gb|EEI18790.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
Length = 743
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 309/533 (57%), Gaps = 57/533 (10%)
Query: 129 RLW--EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
++W +D+ +S Y++ + +++V+RA A AH Q R+SGEP+I HP++VA IL +L
Sbjct: 4 KIWTADDVIKKVSEYMNDDHVKMVKRAYEFAKIAHKDQMRQSGEPYITHPIQVAGILADL 63
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
+D E++++G LHD VEDT ++E FG V IV+G V+KL K+K K S
Sbjct: 64 HMDPETVSSGFLHDVVEDTGA-ELSDVQELFGNDVALIVDG---VTKLSKIKYK----SS 115
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
++ A++ R++ LAM +++RV+IVKLADRLHNMRTL + P KQ IA ETL+++AP+A
Sbjct: 116 EERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKETLEIYAPIAD 175
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ IK ELE++S Y N + Y ++ + + +++A + I D
Sbjct: 176 RLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQRVDYIQKAINEVKSAISD----- 230
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ +K+EI K YS+YK ++ +++ + +R+I++ + C
Sbjct: 231 -LDIKSEIYGRPKHIYSVYKKMVDKHKQFSQIYDLLAIRVIVQSI------------KDC 277
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG +H W P+P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +
Sbjct: 278 YAVLGAIHTEWKPMPGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRV 334
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH++ + +T V ++ N +++W I E QE+
Sbjct: 335 AEFGIAAHWAYKEGITNGVKGSQDNN-----------------KLNWFKQIIELQED--- 374
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +F+D++ +L G V+VFTP+G++ LPKGA +D AYMIHTE+GN AKVNG
Sbjct: 375 TDDAADFMDSVKGELFGDHVYVFTPKGDVFELPKGAGPLDMAYMIHTEVGNHTTGAKVNG 434
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+V H + N ++V+IIT + S S + W++ TR AR+KI ++ R
Sbjct: 435 KIVPLDHQVKNGDIVDIITSTSSSGPS-----RDWVKMVHTRRARNKIKQYFR 482
>gi|408421441|ref|YP_006762855.1| GTP pyrophosphokinase RelA [Desulfobacula toluolica Tol2]
gi|405108654|emb|CCK82151.1| RelA: GTP pyrophosphokinase [Desulfobacula toluolica Tol2]
Length = 717
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 293/526 (55%), Gaps = 59/526 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ + L Y + +++ RA + + HDGQ R SGEP++ HP+EVA IL ++ LD
Sbjct: 3 RINDILDKIYEYNPEGDCDIIDRAYVYSARVHDGQVRLSGEPYLSHPLEVANILADMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
ESIAA LLHD +EDT T E IE+ FG V IV G TK+S L K
Sbjct: 63 VESIAAALLHDVIEDTPA-TREDIEDMFGPGVAHIVSGVTKLSAL-PFSTKIAQ------ 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLL 307
+A+ LR+M LAM +++RV+++KLADR+HNMRTL H P KQ++IA ETL ++AP+A L
Sbjct: 115 QAESLRKMILAMADDIRVVLIKLADRIHNMRTLKYHRKPEKQAAIAQETLDIYAPIAARL 174
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G++ +K ELE+++F YT +Y ++K V E E + N+ L +K+++ M
Sbjct: 175 GIFWMKYELEDIAFYYTKRHEYERIKALVNKARHEKEDYIITVNEKLHEKMKE------M 228
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++ EI+ K+ YSIY+ ++ NEV + RII+ P CY
Sbjct: 229 NLEAEIKGRYKQNYSIYQKMISQNLDFNEVYDVIAFRIILDTVPQ------------CYA 276
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
+G +H +W PI +KDYI PKPN YQS+HTT++ E R+E+QIRT++MD IAE
Sbjct: 277 AMGAIHSMWKPIYYKIKDYIGNPKPNMYQSIHTTVVGPKGE---RVEIQIRTQDMDNIAE 333
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+S + G + N + +W+ + E QE +
Sbjct: 334 SGIAAHWSYK-----------------EGSKIDENTGEL---FAWIRNLVENQENY---N 370
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
EF++ + DL ++VFTP+GEIK LPK AT VD+AY IHTE+G + AKVNG +
Sbjct: 371 DPDEFLENVRIDLYPDEIYVFTPQGEIKILPKKATPVDFAYRIHTEVGAECTGAKVNGKI 430
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKI 653
V +H L + +EIIT + WL KT AR KI
Sbjct: 431 VQLSHRLKTGDTIEIITTKGHTPSP------DWLNFVKTVKARTKI 470
>gi|392330576|ref|ZP_10275191.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
gi|391418255|gb|EIQ81067.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
Length = 739
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 304/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNDTDVAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT+ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDT-TLDNIEADFGKDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
SF Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 SFRYLNETEFYKISHMMKEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGIRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAMDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR++I +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNRIRQFFKNQ 485
>gi|210623794|ref|ZP_03294054.1| hypothetical protein CLOHIR_02005 [Clostridium hiranonis DSM 13275]
gi|210153376|gb|EEA84382.1| hypothetical protein CLOHIR_02005 [Clostridium hiranonis DSM 13275]
Length = 771
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 311/536 (58%), Gaps = 55/536 (10%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+S + L E L SY +L+ + +A LA AH QKR+SGEP+ IHP+ VA I+ +
Sbjct: 31 ESDKELIEILDKVKSYAPNGDLDTIMKAYKLAKYAHRDQKRKSGEPYFIHPLAVANIICD 90
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
++LD E+++ GLLHD VEDT T+E IE F + +V+G V+KLGK+K + S
Sbjct: 91 MQLDIETVSGGLLHDVVEDTEY-TYEDIESIFNKEIADLVDG---VTKLGKIKYR----S 142
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++ ++++LR+MFLAM +++RVI++KLADRLHNMRTL++M P K ATETL+++ +A
Sbjct: 143 KEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLNYMDPEKAKYKATETLEIYGGIA 202
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ +IK ELE+L+ Y + + Y ++ +V+ + E+ + + L +K +
Sbjct: 203 HRLGISKIKWELEDLALRYIDHDGYYELVEKVSMKRSQREENIAKIVNCLQEKFAE---- 258
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
M + ++ K YSIY+ + S E+ + +R+ L +
Sbjct: 259 --MEIPCDVYGRPKHFYSIYRKMKNKNKSFEEIFDLTAVRV------------LVDTVKD 304
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG+VH +W PIP KDYIA PKPN YQSLHTT++ E LE+QIRT EM
Sbjct: 305 CYAVLGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEP---LEIQIRTHEMHN 361
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
IAE GIAAH+ + ++ N + + I ++ WL + EW+++
Sbjct: 362 IAEYGIAAHWKYKEGIS--------NSKEDK----------IEEKLQWLRQMMEWEKDL- 402
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
EF+D + D+ S+V+VFTP+G++ LP +T +D+AY +HT IGNK V AKV+
Sbjct: 403 --KDPHEFLDALKEDVFSSQVYVFTPQGDVIELPAESTPIDFAYRVHTNIGNKCVGAKVD 460
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
G +V+ + L N +VEI+T S ++ + WL KT +A+ +I +F +++
Sbjct: 461 GRMVTLDYKLQNGNIVEILT-----SSNSPGPSRDWLGIVKTPNAKSRIRQFFKKE 511
>gi|148269345|ref|YP_001243805.1| (p)ppGpp synthetase I SpoT/RelA [Thermotoga petrophila RKU-1]
gi|281411958|ref|YP_003346037.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga naphthophila RKU-10]
gi|147734889|gb|ABQ46229.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga petrophila RKU-1]
gi|281373061|gb|ADA66623.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga naphthophila RKU-10]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 299/523 (57%), Gaps = 57/523 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
+ E +L+ +A A H+GQKR SGEPFI HPVEVA+IL L +D ++ A LLHD
Sbjct: 26 FTREEKKLLTKAYEFARIVHEGQKRFSGEPFITHPVEVAKILAALGVDVTTLVAALLHDV 85
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
VED V+ ++I++EFG + RIV+G TKVS + +++ K + +++MFLAM
Sbjct: 86 VEDGENVSLDQIKKEFGPELARIVDGVTKVSNINAPIGSDQDSR---KKIETIQKMFLAM 142
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
E++RVI VKLADRLHNMRT+ ++ K+ A ETL+++APLA LG+Y IKSELE+L
Sbjct: 143 AEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYKAYETLEIYAPLAHKLGIYSIKSELEDL 202
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F E+Y K+K VA+ KE EK E +L +E+ + +K + K
Sbjct: 203 AFKVLYPEEYYKIKELVAEKRKEREKRTNEYISLLKSALEEHK------IKAIVEGRYKH 256
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI+K + + E+ + LR+I+K CY VLG+VH IW P+
Sbjct: 257 YYSIWKKMKEKEKKFEEIYDLIALRVIVKDVTT------------CYTVLGIVHNIWKPL 304
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGY+SLHT +I E LE+QIR EEM AE G+ AH+
Sbjct: 305 PGRFKDYIAAPKSNGYRSLHTAVITGYGEP---LEIQIRDEEMHREAEYGLIAHW----- 356
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ +P+ ++ + W+ + +W++E T EF D I ++
Sbjct: 357 ----IYKEKPDLKTAK---------------EWIERLLDWRKELAQGFT--EFED-IKKE 394
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G+I +LPKG+T +D+AY IHTEIG+ AKVNG +V + L N +V
Sbjct: 395 LQMDEVFVFTPKGDIIHLPKGSTPIDFAYAIHTEIGHHYSGAKVNGKIVPIDYQLRNGDV 454
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
VEII S WL++AKT SAR KI +FL+E+ A
Sbjct: 455 VEIIVNKNSPGPSV-----DWLKYAKTHSARAKIRRFLKEKLA 492
>gi|227510270|ref|ZP_03940319.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227189922|gb|EEI69989.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 743
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/519 (38%), Positives = 301/519 (57%), Gaps = 54/519 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + +++V+RA A AH Q R+SGEP+I HP++VA IL +L +D E++++G LHD
Sbjct: 18 YMNDDHVKMVKRAYEFAKIAHKDQMRQSGEPYITHPIQVAGILADLHMDPETVSSGFLHD 77
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT ++E FG V IV+G V+KL K+K K S ++ A++ R++ LA
Sbjct: 78 VVEDTGA-ELSDVQELFGNDVALIVDG---VTKLSKIKYK----SSEERLAENHRKLLLA 129
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+IVKLADRLHNMRTL + P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 130 MCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKETLEIYAPIADRLGIGTIKWELEDI 189
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + + +++A + I D + +K+EI K
Sbjct: 190 SLRYLNPQQYYRIVHLMNSRRDQRVDYIQKAINEVKSAISD------LDIKSEIYGRPKH 243
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+YK ++ +++ + +R+I++ + CY VLG +H W P+
Sbjct: 244 IYSVYKKMVDKHKQFSQIYDLLAIRVIVQSI------------KDCYAVLGAIHTEWKPM 291
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 292 PGRFKDYIAMPKANMYQSLHTTVIGPEGKP---LEVQIRTEEMHRVAEFGIAAHWAYKEG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+T V ++ N +++W I E QE+ + +F+D++ +
Sbjct: 349 ITNGVKGSQDNN-----------------KLNWFKQIIELQED---TDDAADFMDSVKGE 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L G V+VFTP+G++ LPKGA +D AYMIHTE+GN AKVNG +V H + N ++
Sbjct: 389 LFGDHVYVFTPKGDVFELPKGAGPLDMAYMIHTEVGNHTTGAKVNGKIVPLDHQVKNGDI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V+IIT + S S + W++ TR AR+KI ++ R
Sbjct: 449 VDIITSTSSSGPS-----RDWVKMVHTRRARNKIKQYFR 482
>gi|417885550|ref|ZP_12529704.1| GTP diphosphokinase [Lactobacillus oris F0423]
gi|341595472|gb|EGS38121.1| GTP diphosphokinase [Lactobacillus oris F0423]
Length = 745
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 299/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV RA A H Q+R+SGEP+IIHP++VA IL L++D E
Sbjct: 10 EDVQKMVSSYMNAEHVALVERAYRFAEVCHHDQRRKSGEPYIIHPIQVAGILANLQMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++AAG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVAAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIQYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + + + K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSINRSIKLIKKAISD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YSIY+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVV------------DTIKDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT M +AE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKANGYQSLHTTIIG---PEGRPLEVQIRTHHMHQVAEFGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTDGVQQTRDSQKLNVVKEILEMRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKGA +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T ++ + S + WLE TR AR+KI F R
Sbjct: 443 DYEIKNGDIVDILTSSSSAGPS-----RDWLELVSTRRARNKIRSFFR 485
>gi|373465559|ref|ZP_09557016.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
gi|371760145|gb|EHO48845.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
Length = 748
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 316/563 (56%), Gaps = 73/563 (12%)
Query: 98 RSSLLHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAF 157
R L+ +A K W + D K+ S Y++ ++ V++A A
Sbjct: 2 REELIRLATKVW-------TADDVIKKVS------------EYMNDEHVKQVKKAYEFAR 42
Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
AH QKR+SGEP+I HP++VA IL +L +D E+++AG LHD VEDT V + I E FG
Sbjct: 43 IAHQDQKRQSGEPYITHPIQVAGILADLHMDPETVSAGFLHDVVEDTGAVLGD-IRELFG 101
Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
V IV+G V+KL K+K K S Q+ A++ R++ LAM +++RV+IVKLADRLHN
Sbjct: 102 DDVALIVDG---VTKLSKIKYK----SSQERLAENHRKLLLAMCKDIRVMIVKLADRLHN 154
Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
MRTL + P KQ IA ETL+++AP+A LG+ IK ELE++S Y N + Y ++ +
Sbjct: 155 MRTLKSLRPDKQRRIAKETLEIYAPIADRLGIGTIKWELEDISLRYLNPQQYYRIVHLMN 214
Query: 338 DLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEV 397
+ +++A + I D + +K+EI K YS+Y+ +++ +++
Sbjct: 215 SRRDQRVDYIKKAISEVKSAISD------LDIKSEIYGRPKHIYSVYRKMVEKHKQFSQI 268
Query: 398 NQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQS 457
+ +R+I VG + CY VLG +H W P+P KDYIA PK N YQS
Sbjct: 269 YDLLAIRVI--------VGSIKD----CYAVLGAIHSKWKPMPGRFKDYIAMPKANMYQS 316
Query: 458 LHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGK 517
LHTT+I + LEVQIRTEEM +AE GIAAH++ + G+ R ++ +G
Sbjct: 317 LHTTVIGPEGKP---LEVQIRTEEMHRVAEFGIAAHWA---YKEGI----RSEVKASQGI 366
Query: 518 TVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNL 577
T+ ++W I E QE+ + +F+D++ +L G V+VFTP+G++ L
Sbjct: 367 TI----------LNWFKQIIELQED---TDDAADFMDSVKGELFGDHVYVFTPKGDVYEL 413
Query: 578 PKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRH 637
PKGA +D AYMIHTE+GN A+VNG +V H + N ++V+IIT + S
Sbjct: 414 PKGAGPLDMAYMIHTEVGNHTTGARVNGKIVPLDHQVKNGDIVDIITSTGSAGPS----- 468
Query: 638 KQWLEHAKTRSARHKIMKFLREQ 660
+ WL TR AR+KI ++ R++
Sbjct: 469 RDWLPLVHTRRARNKIKQYFRQE 491
>gi|392531693|ref|ZP_10278830.1| GTP pyrophosphokinase [Carnobacterium maltaromaticum ATCC 35586]
gi|414083941|ref|YP_006992649.1| relA/SpoT family protein [Carnobacterium maltaromaticum LMA28]
gi|412997525|emb|CCO11334.1| relA/SpoT family protein [Carnobacterium maltaromaticum LMA28]
Length = 736
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 307/524 (58%), Gaps = 54/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T +Y++ + V++A A +AH+GQ R+SGE +IIHP++VA IL EL++D ++A G
Sbjct: 16 TSTYMNSEHVAFVKKACEYATKAHEGQFRKSGEEYIIHPIQVAAILAELKMDPATVATGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT + T E I +EF V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTEM-TLEDIAKEFSPEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
LAM +++RVI+VKLADRLHN+RTL H KQ IA ETL+++APLA LG+ +IK EL
Sbjct: 128 LLAMAQDLRVIMVKLADRLHNLRTLKHHRADKQRRIANETLEIYAPLAHRLGISRIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ S Y N + Y ++ + +E E + ++ + KI++ +D + +K EI
Sbjct: 188 EDTSLRYLNPQQYYRIVHLMNSKREEREAYIADS----IDKIQES--VDELKLKAEIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + NE+ + +R+++ + CY VLG +H W
Sbjct: 242 PKHIYSIYRKMKDQKKQFNEIYDLLAIRVMV------------DSIKDCYAVLGAIHTRW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQS+HTT+I +EVQIRT EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIAMPKANMYQSIHTTVIGPRGNP---VEVQIRTFEMHEVAEFGVAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G T + N + ++SW I E Q+E N S +F++++
Sbjct: 347 K-----------------EGITKKIENDAVGTKLSWFRDIIELQDE--ANDAS-DFMESV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ +V+VFTP+G++ LP GA +D+A+ IHTEIGNK + AKVNG +V + L N
Sbjct: 387 KEDIFKDKVYVFTPKGDVSELPSGAGPLDFAFNIHTEIGNKTIGAKVNGKIVPLNYKLKN 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++V+++T S ++F + W+ T A++KI +F + Q
Sbjct: 447 GDIVDVMT-----SPNSFGPSRDWINLVSTSKAKNKIKRFFKLQ 485
>gi|374993650|ref|YP_004969149.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus orientis
DSM 765]
gi|357212016|gb|AET66634.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus orientis
DSM 765]
Length = 739
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 300/515 (58%), Gaps = 45/515 (8%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L +V +A A AH Q R SGE +I+HP+EVA+IL ELE+D +IAA LLHD VEDT
Sbjct: 19 LAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEATIAAALLHDVVEDTE 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T IE+ FG + +V+G V+KLG+++ K S + + ++LR+MFLAM +++R
Sbjct: 79 Y-TIADIEKNFGEEIALLVDG---VTKLGRIEYK----SKVEQQVENLRKMFLAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL + P KQ IA ETL++FAPLA LG+++IK ELE+LSF Y
Sbjct: 131 VILIKLADRLHNMRTLKYHSPAKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLK 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E+Y + +A +E E + E + +K LD + + +I K YSIY+
Sbjct: 191 PEEYYDLVEGIALKRREREAYINEVIVQMREK------LDEVQIYADIAGRPKHFYSIYR 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ ++E+ + +R+I+ CY LG++H +W PIP KD
Sbjct: 245 KMTTQNKELSEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PKPN YQSLHTTLI E+ E+QIRT EM +E GIAAH+ + G
Sbjct: 293 YIAMPKPNMYQSLHTTLIG---ENGEPFEIQIRTCEMHRTSEYGIAAHWK---YKEGSGK 346
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
N S + +V N ++SWL + EWQ + + + EF++++ DL V
Sbjct: 347 ECSTNTTSNKTASV-----NFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLFADTV 398
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
FVFTP+G++ LP + VD+AY +HT++G++ + AK+NG +V LAN +++EI+T
Sbjct: 399 FVFTPKGDVVELPAESCPVDFAYRVHTDVGHRCIGAKINGRIVPLDTKLANGDILEILT- 457
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
SK + WL KT A+++I ++ +++
Sbjct: 458 ----SKQGGGPSRDWLSFVKTSQAKNRIRQWFKKE 488
>gi|289450409|ref|YP_003475599.1| putative GTP diphosphokinase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184956|gb|ADC91381.1| putative GTP diphosphokinase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 771
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 295/517 (57%), Gaps = 60/517 (11%)
Query: 149 VRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
+ +A AF+AH Q+R++GEP+I HP+ VA IL ELE+D ++ A LLHDTVEDT T
Sbjct: 33 LEKAFEYAFQAHIDQRRQTGEPYITHPLTVATILLELEVDQATLVAALLHDTVEDTGT-T 91
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
E I + FG V +V+G TK+ K+ S ++++A++ R+MFLAM +++RV++
Sbjct: 92 LEDIADRFGDDVAALVDGVTKLEKI-------RFSSKEELQAENFRKMFLAMAKDIRVVL 144
Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
+KLADRLHNMRTL M KQ IA ETL ++APLA LG+Y+ K ELE+L Y +
Sbjct: 145 IKLADRLHNMRTLKTMREDKQKRIAQETLDIYAPLAHRLGIYKWKWELEDLCLRYLDRTA 204
Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVL 388
Y ++ +A +E E+ L+E L K + + M + EI K YSIY+ +
Sbjct: 205 YYELVGAIAQRREERERYLQEIIIDLQKTVAE------MGINAEIEGRPKHFYSIYRKME 258
Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
K S++++ + R+I+ CY VLGLVH + PIP KDYIA
Sbjct: 259 KKHKSLDQIFDLFACRVIV------------DTVVDCYTVLGLVHDRFRPIPGRFKDYIA 306
Query: 449 TPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
TPKPN YQSLHTT+ +PF E+QIRT EM +AE GIAAHY + G
Sbjct: 307 TPKPNMYQSLHTTVFGPKGVPF--------EIQIRTFEMHRVAEYGIAAHYR---YKEGK 355
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
G ARP + T +++WL + +WQ++ + EF++ + L+
Sbjct: 356 TGPARPGSKESANDT----------KLAWLRQLLDWQKDM---KDAGEFMEGLRNGLIED 402
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVFTPRG++ LP GAT +D+AY IH+ IGN+M A++N + L N ++VEI+
Sbjct: 403 EVFVFTPRGDVICLPIGATPIDFAYNIHSGIGNRMYGARINSRIAPIDTELKNGDIVEIL 462
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
T + + S + WL ++ SAR KI ++ +++
Sbjct: 463 TSDKVHGPS-----RDWLNVVRSSSARSKINQWFKKE 494
>gi|306820100|ref|ZP_07453748.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551878|gb|EFM39821.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 739
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 309/534 (57%), Gaps = 62/534 (11%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
E+L + +P ++ ++ +A A H+GQ RRSGE +IIHPVEVA IL ELELD
Sbjct: 3 ENLIQKVKTYNPEADVSIIEKAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVA 62
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGL+HD VEDT V T ++++ FG + ++V+G TK+ K+ K K EN +A
Sbjct: 63 SIAAGLMHDVVEDTEV-TSDQMKSMFGEEIAKLVDGVTKLGKIA-YKTKEEN------QA 114
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MF+AM +++RV+++KLADRLHNMRTL MPP+K + ETL++FAP+A+ LGM+
Sbjct: 115 ENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMF 174
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA----NKILMKKIEDDQFLDL 366
+IK E+E+++ YT + Y ++R++ + E + + + L K+I ++ F
Sbjct: 175 KIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHF--- 231
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
EI K YSIYK + + E+ +R+I++ K CY
Sbjct: 232 -----EIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE------------CY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
VLG+VHG+W PIP KDYI PK N YQSLHTT+ E +EVQIRTEEM A
Sbjct: 275 WVLGIVHGMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGEL---VEVQIRTEEMHKTA 331
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + GR + + + + +++WL + +WQ+E
Sbjct: 332 EYGIAAHWKYK------------QGR------IDPHESEMDKKLAWLRQLMDWQKEVTD- 372
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
E++ ++ DL +VFVFTP+G+I LP G+T +D AY IHT +GNK V AK+N
Sbjct: 373 --PDEYMQSLKTDLYSHQVFVFTPKGDIIELPAGSTPIDMAYKIHTNVGNKCVGAKINNK 430
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V L N ++VEI+T + +SK + WL ++ + KI ++ +++
Sbjct: 431 IVPLDTELKNGQIVEIMT--SANSKGP---SRDWLNIVQSSHTKSKIKQWFKKE 479
>gi|335357242|ref|ZP_08549112.1| GTP pyrophosphokinase [Lactobacillus animalis KCTC 3501]
Length = 740
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 308/547 (56%), Gaps = 63/547 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + +V++A A H Q R+SGEP+I+HP++VA IL EL++D E+++AG LHD
Sbjct: 19 YMNAEHVAIVQKACDFATYVHREQFRKSGEPYIVHPIQVAAILAELKMDPETVSAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V+ + I E FG + IV+G TK+SK+ + ++H Q A++ R++ LA
Sbjct: 79 VVEDTPVILAD-IGELFGKDIEVIVDGVTKLSKI-----RYKSHKEQ--LAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE+
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLKHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + E + + EA + I +DL EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRRDERLQYINEAIDEIKGAI-----VDLKLKDCEIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + +++ + +R+I+K + CY VLG +H WTP+
Sbjct: 246 IYSIYRKMRDQHKQFSQIYDLLAIRVIVKSI------------KDCYAVLGAIHTKWTPM 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHY 494
P KDYIA PK N YQSLHTTLI PF EVQIRTEEM +AE GIAAH+
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTLIGPNGTPF--------EVQIRTEEMHRVAEYGIAAHW 345
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
+ + GKT + +++ I E Q E ++ + +F++
Sbjct: 346 AYK-----------------EGKTDGVKETTTGEKLNLFKEIIELQNE---SIDASDFME 385
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
++ DL RV+VFTP+G++ LPKGA +D AY IHTEIGN AKVNG +V + +
Sbjct: 386 SVKGDLFSDRVYVFTPKGDVFELPKGAGPLDMAYSIHTEIGNHTTGAKVNGKIVPLDYQV 445
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVG 674
N ++V+I+T S+++ + WLE T AR+K+ +F ++Q + + D +
Sbjct: 446 KNGDIVDILT-----SQNSAGPSRDWLELVHTNKARNKVKRFFKQQDRIQNIDQGKDILE 500
Query: 675 DFVADSG 681
+ + + G
Sbjct: 501 EALIEEG 507
>gi|89093832|ref|ZP_01166778.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Neptuniibacter caesariensis]
gi|89081962|gb|EAR61188.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Oceanospirillum sp. MED92]
Length = 713
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 291/542 (53%), Gaps = 51/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL P ++ VRR+ A +AHDGQKR+SGEP++ HP+ A IL EL +D +S+ A +LHD
Sbjct: 14 YLDPQQIRQVRRSYFYAEQAHDGQKRKSGEPYVTHPLAAANILAELRMDHQSLMAAMLHD 73
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT V T+E IE +FG V IV+G +K++ L E + + +A++ ++M LA
Sbjct: 74 VIEDTEV-TYEGIESQFGKVVADIVDGVSKLTHL-------EFETKAEAQANNFQKMVLA 125
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M E++RVI+VKLADRLHNMRTL MPPHKQ IA ETL ++AP+A LGM ++ ELE+L
Sbjct: 126 MAEDIRVILVKLADRLHNMRTLGAMPPHKQRRIARETLDIYAPIAARLGMRDVQVELEDL 185
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F ++R V + + + + + K+++ + +T + K
Sbjct: 186 AFQAHYPMRSKHIRRAVVQARGQRKDVISTIQETIEKRLQKEGLSGQVTGRE------KH 239
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY + R S +E+ + RI+ CY LG VH ++ P+
Sbjct: 240 LYSIYSKMRAQRKSFSEIMDVFAFRIV------------TDSVDDCYRTLGAVHNLYKPV 287
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
KDYIA PK NGYQSLHT L +EVQIRT EMD +A +GIA H
Sbjct: 288 HGRFKDYIAIPKANGYQSLHTDLFG---ARDITIEVQIRTHEMDAVASQGIAEH------ 338
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
H + + L N A + W+ + E + GN S EF+D++ D
Sbjct: 339 -----SHYKHDEDDIDASESALGNYKRARK--WVQGLLEMHQR-AGN--SMEFIDSVKTD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L V+VFTP G+I LP GAT VD+AY +HT++GN V+ ++N L + L N +
Sbjct: 389 LFPDEVYVFTPLGKIMELPSGATAVDFAYAVHTDVGNSCVSCRINRRLAPLSQPLENGQT 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
VEIIT + SA Q + WL T AR I FL+ Q + E+ + F+A+
Sbjct: 449 VEIIT-----TPSA-QPNMAWLNFVVTGKARSAIRHFLKNQQRHESVELGQRLLNQFLAN 502
Query: 680 SG 681
G
Sbjct: 503 YG 504
>gi|184155287|ref|YP_001843627.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
gi|385812253|ref|YP_005848644.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
gi|183226631|dbj|BAG27147.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
gi|299783150|gb|ADJ41148.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
Length = 744
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 300/534 (56%), Gaps = 52/534 (9%)
Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+ E ED++ ++ Y++ + LV RA A AH GQ R+SGEP+IIHP++VA IL E
Sbjct: 4 TKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAE 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L++D E++ AG +HD VEDT T + I+E FG T+ IV+G+TK+SK+ K +
Sbjct: 64 LKMDPETVCAGYMHDLVEDTGA-TLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQ--- 119
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
A+ R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A
Sbjct: 120 ----MAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ IK ELE+LS Y N + Y ++ + + + A K++ I D L
Sbjct: 176 DRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIAD---L 232
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
DL EI K YS+Y+ ++ +++ + +R+++ +
Sbjct: 233 DLGP-NVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVV------------DSIKD 279
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG +H WTP+P KDYIA PK NGYQSLHTT+I LE+QIRT +M
Sbjct: 280 CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIG---PEGRPLEIQIRTHQMHE 336
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+AE G+AAH++ + T V A + + LN ++E E
Sbjct: 337 VAEYGVAAHWAYKEGKTNGVDQASQDSKK-------------------LNVVKEILELRS 377
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+ + EF+ I D+ +V+ FTP+G+ +PKGA +D AY IHTE+GN AKVN
Sbjct: 378 ESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVN 437
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
G +V + + N ++V+I+T S S+ + W++ TR AR+KI +F R
Sbjct: 438 GRIVPLNYEIKNGDIVDILT-----SSSSAGPSRDWMDLVSTRRARNKIRQFFR 486
>gi|340758948|ref|ZP_08695526.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium varium ATCC 27725]
gi|251835906|gb|EES64444.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium varium ATCC 27725]
Length = 726
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 301/518 (58%), Gaps = 64/518 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+LE ++ AL A E H+GQ R+SGE +I+HPVEV +IL ++++D ++I AG+LHD VEDT
Sbjct: 19 DLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKMDTDTIVAGILHDIVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
++T I+ FG TV +V+G TK+ L K ++EN +R+M LAM +
Sbjct: 79 -LITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQDEN----------IRKMILAMAQN 127
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RVII+KL+DRLHNMRTL +M P KQ +I+ ETL ++APLA LG+ +IK ELE+L Y
Sbjct: 128 LRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAHRLGIAKIKWELEDLCLRY 187
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
E+Y +K + E + +E K ++K + D +K ++ K YSI
Sbjct: 188 LKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHD------TGIKGNVKGRFKHFYSI 241
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
YK + + +++ + +RII+ + CY+ LG++H + P+P
Sbjct: 242 YKKMYEKGKEFDDIYDLMGVRIIV------------DTEGECYNTLGVIHSHFKPVPGRF 289
Query: 444 KDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
KDYIA PK N YQS+HTT++ P + F +E+QIRTEEMD +AE GIAAH+S
Sbjct: 290 KDYIAVPKSNNYQSIHTTIVGP---QGKF-IEIQIRTEEMDRVAEEGIAAHWS------- 338
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ + +G V WL I E Q E +++F+ ++T D++
Sbjct: 339 ----YKEKTKVTKGDQVY----------GWLRNILELQNE---AEDTQDFIKSVTEDIMN 381
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
VFVF+P+G+I LP+G+T +D+A+ IHT+IG K V AKVNG +V+ + L N + VEI
Sbjct: 382 ETVFVFSPKGDILELPQGSTPLDFAFAIHTQIGCKCVGAKVNGKIVTLDYKLQNGDRVEI 441
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
IT +K++ K WL+ T A+ KI K L+EQ
Sbjct: 442 IT-----AKNSKGPAKDWLDIVVTHGAKSKIRKLLKEQ 474
>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
Length = 737
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 303/538 (56%), Gaps = 58/538 (10%)
Query: 124 EDSPERLWEDLRPTISYLSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
E + E ++ L TI P+ E ++ +A +LA +AH Q+R SGE +I+HP+ VA+IL
Sbjct: 8 EGTVEEKFQYLLATIRKYQPDLSEDILTKAFILAADAHKTQRRVSGELYIVHPLAVAQIL 67
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
++++D +I A LLHD VEDT T E IEE FG V +V+G TK+++L +
Sbjct: 68 ADMKIDATTITASLLHDVVEDTKY-TLEEIEERFGKEVAFLVDGVTKLNRL-------DY 119
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
+ +D + + LR+MFLAM +++RV+++KLADRLHNMRTL +M KQ I+ ETL++FAP
Sbjct: 120 RTKEDQQLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRSDKQKRISQETLEIFAP 179
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG++ IK ELE+LSF Y + Y + ++ E+ + +A +L K + D
Sbjct: 180 LAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEIVNDAITVLQKALADSH 239
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+ EI K YSIYK + K +++V + +RII+
Sbjct: 240 ------ISFEINGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIV------------DTV 281
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
Q CY VLG+VH +W P+P KDYIA PKPN YQSLHTT+I + +E+QIRT EM
Sbjct: 282 QDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGSQGQP---VEIQIRTWEM 338
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
+AE G+AAH+ + GHA K + WL + EWQ+
Sbjct: 339 HHVAEYGVAAHWRYK------EGHANAGANEFDEK------------MGWLRNLLEWQD- 379
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
REF++ + D VFVFTP+G++ +LP+GA +D+AY IHT++G+ V AK
Sbjct: 380 ---TSNPREFMNALKLDAFSDEVFVFTPQGDVIDLPQGAIPIDFAYRIHTDVGHHCVGAK 436
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+NG +V + L N ++VEIIT + K + WL+ + +R KI + + +
Sbjct: 437 INGKIVPLDYSLKNGDIVEIITTK--TGKPSM----DWLKIVGSSESRSKIRTWFKRE 488
>gi|374579512|ref|ZP_09652606.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
gi|374415594|gb|EHQ88029.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
Length = 748
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 301/517 (58%), Gaps = 43/517 (8%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L +V +A A AH Q R SGE +I+HP++VA+IL ELE+D ++AA LLHD VEDT
Sbjct: 19 LAIVDKAYQFAERAHRNQLRNSGEDYILHPLQVAQILVELEMDEATVAASLLHDVVEDT- 77
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T IE+EFG + +V+G V+KLG+L K S + + ++LR+MFLAM +++R
Sbjct: 78 AFTIHDIEKEFGPEIALLVDG---VTKLGRLAYK----SKVEQQVENLRKMFLAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL + KQ IA ETL++FAPLA LG+++IK ELE+LSF Y
Sbjct: 131 VILIKLADRLHNMRTLRYHSVEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLR 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++Y + +A +E E + N+++++ E L+ + + +I K YSIY+
Sbjct: 191 PQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LNEVEIYADIAGRPKHFYSIYR 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ +NE+ + +R+I+ CY LG++H +W PIP KD
Sbjct: 245 KMKTQNKELNEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PKPN YQSLHTTLI E E+QIRT EM +E GIAAH+ + G
Sbjct: 293 YIAMPKPNMYQSLHTTLIGVHGEP---FEIQIRTCEMHRTSEYGIAAHWKYK------EG 343
Query: 506 HARPNGRSPRGKTVCLNNA--NIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
++ GRS K A N ++SWL + EWQ + + + EF++T+ DL
Sbjct: 344 SSKECGRSSNNKDCGYKTASVNFDQKLSWLRQLLEWQHD---SRDAGEFMETLKIDLFAD 400
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVFTP+G++ LP + VD+AY +HT++G++ + AK+NG +V L N +++EI+
Sbjct: 401 TVFVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCIGAKINGRIVPLETKLNNGDILEIL 460
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
T K + WL KT A+++I ++ +++
Sbjct: 461 TS---KPKQGGGPSRDWLSFVKTSQAKNRIRQWFKKE 494
>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
Length = 734
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/514 (38%), Positives = 300/514 (58%), Gaps = 57/514 (11%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
E +R+A LA +AH QKR SGEP+I+HP+ VA+IL ++E+D +I A L+HD VEDT
Sbjct: 27 EDIRKAYELANDAHKEQKRVSGEPYILHPLAVAQILADMEIDTTTITASLMHDVVEDTTY 86
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E +E FG V +V+G TK+++L + + +D + + +R+MFLAM ++VRV
Sbjct: 87 -TLEDMERLFGKEVAFLVDGVTKLNRL-------DYRTKEDQQVNSMRKMFLAMAKDVRV 138
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
+++KLADRLHNMRTL M KQ IA ETL+++APLA LG++ IK ELE+LSF Y
Sbjct: 139 VVIKLADRLHNMRTLKFMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEP 198
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+ Y + ++ + + E+ + EA +L + + + + EI K YSIYK
Sbjct: 199 DKYYDLVDQMKEKRQVREEIVNEAIDVLKETLSES------GISFEINGRPKHFYSIYKK 252
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+ K ++++ + +R+I+ + Q CY VLG+VH +W P+P KDY
Sbjct: 253 MKKDNRDLSQIYDLYAIRVIV------------NTVQDCYGVLGIVHSLWKPLPYRFKDY 300
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
IA PKPN YQSLHTT+I + +E+QIRT EM IAE G+AAH+ + GH
Sbjct: 301 IAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHHIAEYGVAAHWRYK------EGH 351
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
A G+T + ++ WL + EWQ+ +EFV+ + D VF
Sbjct: 352 A-------AGRTSEFDE-----KMGWLRNLLEWQD----TSNPQEFVNALKLDAFSDEVF 395
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VFTPRG++ +LP+GA +D+AY IHT++G++ V AKVN +V + L N ++VEIIT
Sbjct: 396 VFTPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAKVNSKIVPLDYALKNGDIVEIIT-- 453
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
SK+ + WL+ + +R KI + +++
Sbjct: 454 ---SKTG-RPSLDWLKIVGSSESRSKIRNWFKKE 483
>gi|398348042|ref|ZP_10532745.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
broomii str. 5399]
Length = 674
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 311/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ E L E +R L P LELV +A ++ +AH GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKEMLLEGVR---DRLGPESLELVEKAYKISEDAHQGQFRLSGEPYIVHPLQVGYILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I+AG+LHD +EDT T E + +FG + ++VEG TK+S++ ++ S
Sbjct: 66 GLDEKVISAGILHDVIEDTKY-TRENMVSDFGTEITQLVEGVTKISEI-------KSQSR 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS PP KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y++KSELE+L+F E+Y +K+R+ E E+ +++ IL +++ +
Sbjct: 178 RLGIYKVKSELEDLAFQVIYPEEYQDIKKRINVKKSEREEYIDKLQIILKQRLAE----- 232
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + ++ K +SIY+ + + +E+ + +RII + C
Sbjct: 233 -ININAQVDGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRII------------TDEIKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +WTP+P KDYIATPK N YQSLHTT+I LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + G N R L + WL ++ WQ+
Sbjct: 337 AEFGIAAHWVYK------EGKTHANERH--------------LTVKWLEVLQSWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +EF++ + DL VFVFTP+GEI LPKGATV+D+A+ IHT++G AK+N
Sbjct: 374 ALDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKINN 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + VE++ + S S WL +T SAR K+ + R
Sbjct: 434 RMIPLRTELRSGDQVEVVV-DKRSKPSPI-----WLRIVRTTSARQKLRAYFRKLREESR 487
Query: 659 ---EQAALSASEIT 669
E A SA+E+T
Sbjct: 488 KDLEHGAESAAELT 501
>gi|386343774|ref|YP_006039938.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
gi|339277235|emb|CCC18983.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
Length = 739
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 308/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LHD
Sbjct: 19 YMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + +++ + +R +++ Y +LG +H +W P+
Sbjct: 245 IYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V ++ AL ++W+ + E Q+ N ++ FVD++ D
Sbjct: 349 IKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/529 (36%), Positives = 299/529 (56%), Gaps = 54/529 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ L+++A A H GQKR SGE + IHP+ VA + ++LD ++I AGL+HD +EDT
Sbjct: 24 DINLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDT 83
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
VT E+++E FG + +V+G TK+ KL K K E +A+++R+M LAM+ ++
Sbjct: 84 -PVTEEQMKENFGEEITFLVDGVTKLKKLN-YKTKEEK------QAENIRKMVLAMSNDI 135
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI++KLADRLHNMRTL + KQ A+ETL+++ PLA LG+Y +K ELE+L F Y
Sbjct: 136 RVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQ 195
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E+Y ++ + V + +E E + + + L D+ L + EI K +SIY
Sbjct: 196 KPEEYYELAQMVHNKRREREAYINQIIETL------DKALSSSNINYEISGRPKGLFSIY 249
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + +++ NE+ + +R+ L CY VLG VH IW PIP +K
Sbjct: 250 KKMSRNKIEFNEIYDLTAVRV------------LVDTVADCYEVLGKVHSIWRPIPNRIK 297
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPNGY+SLHTT+ E EVQIRT +M E GIAAH+ +
Sbjct: 298 DYIGQPKPNGYRSLHTTVFG---EDSKPFEVQIRTRQMHYECEYGIAAHWKYK------- 347
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ K+ + +++++ I EWQ+E ++ S+EF+DT+ D
Sbjct: 348 --------ENKSKSTEFDE-----KLTFIRQIMEWQKEGGKDVDSKEFLDTLKGDFFSKE 394
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+++++P+GEI +LP + +D+AY +HTE+GNK V AKVNG +V +H L +VVEI+T
Sbjct: 395 IYIYSPKGEIYSLPVNSCAIDFAYRVHTEVGNKCVGAKVNGKIVPFSHKLNTGDVVEILT 454
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
SK++ + WL ++ A+ KI +F + EI D++
Sbjct: 455 -----SKNSQGPSRDWLNMVQSNQAKSKIKQFFKRYRKEENIEIGKDSL 498
>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
8305]
gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
8305]
Length = 762
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 300/540 (55%), Gaps = 57/540 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ L+ A A+E H+GQ RRSGEP+I HPV VA ++ +L I AG LHD VEDT
Sbjct: 44 DVALIADAFQFAYELHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDT 103
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
V T E IEE FG +VR +VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 104 EV-TCEEIEERFGESVRHLVEGVTKLSKF-NFSSKTER------QAENFRRMFLAMAKDI 155
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA LG+ K ELE+LSF Y
Sbjct: 156 RVIVVKLADRLHNMRTLQHLKPEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYL 215
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E + +++ VAD + EK ++ + L K+ D +++ E++ K Y IY
Sbjct: 216 EPEAFQEIRELVADRRTDREKRIQTVTEALQKRF-DQGGIEV----EELKGRPKHLYGIY 270
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + + + E+ +A +R+I+K + + CY L ++H + PIP K
Sbjct: 271 QKMQQQQKTFAEIYDLAGVRVILKTR------------EDCYRALAIIHDEFKPIPGRFK 318
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT+I + +E+QIRT EM IAE GIAAH+ +
Sbjct: 319 DYIGLPKPNRYQSLHTTVIGGYGKP---IEMQIRTLEMHYIAEYGIAAHWLYK------- 368
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
G T + +WL + EWQ + ++E++++I +L
Sbjct: 369 ---------ETGGTSDFKFTAEDEKFTWLRQLLEWQNDL---KDAQEYIESIRDNLFEDD 416
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+G++ L +GAT VD+AY IHTE+GN + A+VNG+ L N ++VEIIT
Sbjct: 417 VFVFTPQGDVVALSRGATPVDFAYHIHTEVGNHIKGARVNGSWTVLDTALKNGDIVEIIT 476
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVADS 680
SK++ WL T SAR++I ++ RE+ + VG +DS
Sbjct: 477 -----SKNS-HPSLDWLNFVVTPSARNRIRQWYKRSHREENITRGRSMVEKVVGKSGSDS 530
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/532 (37%), Positives = 297/532 (55%), Gaps = 60/532 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
+L E L+ I +E +R A +A +AH+GQ R +GEP+IIHP+ VA IL ELE+D
Sbjct: 70 KLMEKLKTYIH--ETQSMETIRHAFEIAQKAHEGQIRATGEPYIIHPLAVAYILAELEID 127
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+ I A LLHD VEDT T E I FG V IV+G ++KL + K++ +D
Sbjct: 128 AQGIIAALLHDVVEDT-AYTLEDIRRIFGDEVAFIVDG---ITKLSQFHYKDK----EDQ 179
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+ ++ R+MFLAM +++RV+++KLADRLHNMRTL KQ IA ET++++APLA LG
Sbjct: 180 QTENFRKMFLAMAQDIRVVVIKLADRLHNMRTLGIFRREKQIRIAKETMEIYAPLAHRLG 239
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+Y IK ELE+L F Y + E+Y + R++ K E+ + + ++L + I D
Sbjct: 240 IYNIKWELEDLCFHYLHTEEYYDLVRQMRQKRKAREEIVNDTMEVLHQSIND------AG 293
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+K I K YSIYK + + ++++ + +R+I+ P CY V
Sbjct: 294 IKATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVNTIPQ------------CYAV 341
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG+ H +W P+P KDYIA PKPN YQSLHTT+I + +E+QIRT EM I+E
Sbjct: 342 LGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTKGQP---VEIQIRTWEMHHISEY 398
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
G+AAH+ R G + +ISWL + EWQ+
Sbjct: 399 GVAAHW-----------------RYKEGNKA--GTKDFDQKISWLRRLLEWQD----TSN 435
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
S+EF++ + D+ VFVFTP+G++ NLPKG+ +D+AY IHTE+GN V AKVN +V
Sbjct: 436 SKEFLNALKLDVFSDEVFVFTPKGDVINLPKGSIPIDFAYRIHTEVGNHCVGAKVNNKIV 495
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N ++V +IT A + K ++ W+ + + KI + +++
Sbjct: 496 PLDTKLKNGDIVSVIT--AKTGKPSY----DWINMVGSTECKAKIRSWFKKE 541
>gi|116627099|ref|YP_819718.1| (p)ppGpp synthetase [Streptococcus thermophilus LMD-9]
gi|116100376|gb|ABJ65522.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus thermophilus LMD-9]
Length = 739
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 308/521 (59%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LHD
Sbjct: 19 YMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEVEFYKISHMMKEKRREREALVDE----IVDKIK--TYTAEQGLVGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSI++ + + +++ + +R +++ Y +LG +H +W P+
Sbjct: 245 IYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYKKG 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ G V ++ AL ++W+ + E Q+ N ++ FVD++ D
Sbjct: 349 IKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NANSFGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
Length = 734
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 295/522 (56%), Gaps = 57/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYL + + V +A LA EAH Q+R SGEP+I+HP+ VA+IL ++++D +I A LLH
Sbjct: 19 SYLPKAKCDDVTKAYQLAEEAHKDQRRVSGEPYILHPLAVAQILADMKIDTTTITASLLH 78
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+ T + +++ FG V +V+G TK+S+L + +D + + +R+MFL
Sbjct: 79 DVVEDTSY-TLDDLKKMFGKEVAFLVDGVTKLSRLN-------YRTKEDQQLNSMRKMFL 130
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++VRV+++KLADRLHNMRTL +M KQ IA ETL++FAPLA LG++ IK ELE+
Sbjct: 131 AMAKDVRVVVIKLADRLHNMRTLRYMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELED 190
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y + Y + ++ E+ + EA +L K LD + EI K
Sbjct: 191 LSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIDVLKKA------LDEAHIHCEINGRPK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + K +++V + +R+I+ + CY VLG+VH +W P
Sbjct: 245 HFYSIYKKMKKDNRDLSQVYDLFAIRVIV------------DDVKDCYGVLGIVHSLWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + +E+QIRT EM IAE G+AAH+
Sbjct: 293 LPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP---VEIQIRTWEMHRIAEYGVAAHW---- 345
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
R G N ++ WL + EWQ+ +EFV+ +
Sbjct: 346 -------------RYKEGNQTA-NKDAFDEKMGWLRNLLEWQD----TSNPKEFVNALKL 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D VFVF+PRG++ +LP+GA +D+AY IHT++G++ V AK+NG +V + L N +
Sbjct: 388 DAFSDEVFVFSPRGDVIDLPQGAIPIDFAYRIHTDVGHRCVGAKINGKIVPLDYKLKNGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEIIT K + WL + +R KI + +++
Sbjct: 448 IVEIITSKV--GKPSL----DWLNIVGSSESRSKIRSWFKKE 483
>gi|312870607|ref|ZP_07730721.1| GTP diphosphokinase [Lactobacillus oris PB013-T2-3]
gi|311093882|gb|EFQ52212.1| GTP diphosphokinase [Lactobacillus oris PB013-T2-3]
Length = 745
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 298/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV RA A H Q+R+SGEP+IIHP++VA IL L++D E
Sbjct: 10 EDVQKMVSSYMNAEHVALVERAYRFAEVCHHDQRRKSGEPYIIHPIQVAGILANLQMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++AAG LHD VEDT T + I+E FG T+ I +G+TK LGK++ K+ + A
Sbjct: 70 TVAAGYLHDIVEDTGA-TLDDIKELFGPTIAMIADGDTK---LGKIQYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + + + K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSINRSIKLIKKAISD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YSIY+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVV------------DTIKDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT M +AE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKANGYQSLHTTIIG---PEGRPLEVQIRTHHMHQVAEFGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTDGVQQTRDSQKLNVVKEILEMRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKGA +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T ++ + S + WLE TR AR+KI F R
Sbjct: 443 DYEIKNGDIVDILTSSSSAGPS-----RDWLELVSTRRARNKIRSFFR 485
>gi|402571498|ref|YP_006620841.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus meridiei
DSM 13257]
gi|402252695|gb|AFQ42970.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus meridiei
DSM 13257]
Length = 744
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/515 (38%), Positives = 302/515 (58%), Gaps = 40/515 (7%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L +V +A A AH Q R SGE +I+HP+EVA+IL ELE+D +IAA LLHD VEDT
Sbjct: 19 LAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEATIAASLLHDVVEDTE 78
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T IE+EFG+ + +V+G V+KLG+++ K S + + ++LR+MFLAM +++R
Sbjct: 79 F-TIADIEKEFGSEIALLVDG---VTKLGRIEYK----SKVEQQVENLRKMFLAMAKDIR 130
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL + KQ IA ETL++FAPLA LG+++IK ELE+LSF Y
Sbjct: 131 VILIKLADRLHNMRTLKYHSEQKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLK 190
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
++Y + +A +E E + N+++++ E LD + + +I K YSIY+
Sbjct: 191 PQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LDEVEIFADIAGRPKHFYSIYR 244
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ ++E+ + +R+I+ CY LG++H +W PIP KD
Sbjct: 245 KMTTQNKDLSEIYDLMAIRVIV------------DSVNDCYGALGIIHTMWKPIPGRFKD 292
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PKPN YQSLHTTLI E E+QIRT EM +E GIAAH+ +
Sbjct: 293 YIAMPKPNMYQSLHTTLIGLHGEP---FEIQIRTCEMHRTSEYGIAAHWKYKEGSNKECA 349
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
+G+ KT + N ++SWL + EWQ + + + EF++++ DL V
Sbjct: 350 TKGSSGKDCGNKT---TSVNFEQKLSWLRQLLEWQHD---SRDAGEFMESLKIDLFADTV 403
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
FVFTP+G++ LP + VD+AY +HT++G++ V AK+NG +V L N +++EI+T
Sbjct: 404 FVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCVGAKINGRIVPLETKLNNGDILEILT- 462
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
SK + WL KT A+++I ++ +++
Sbjct: 463 ----SKQGSGPSRDWLSFVKTSQAKNRIRQWFKKE 493
>gi|227514617|ref|ZP_03944666.1| GTP diphosphokinase [Lactobacillus fermentum ATCC 14931]
gi|227087028|gb|EEI22340.1| GTP diphosphokinase [Lactobacillus fermentum ATCC 14931]
Length = 744
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 300/534 (56%), Gaps = 52/534 (9%)
Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+ E ED++ ++ Y++ + LV RA A AH GQ R+SGEP+IIHP++VA IL E
Sbjct: 4 TKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAE 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L++D E++ AG +HD VEDT T + I+E FG T+ IV+G+TK+SK+ K +
Sbjct: 64 LKMDPETVCAGYMHDLVEDTGA-TLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQ--- 119
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
A+ R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A
Sbjct: 120 ----MAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ IK ELE+LS Y N + Y ++ + + + A K++ I D L
Sbjct: 176 DRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIAD---L 232
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
DL EI K YS+Y+ ++ +++ + +R+++ +
Sbjct: 233 DLGP-NVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVV------------DSIKD 279
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG +H WTP+P KDYIA PK NGYQSLHTT+I LE+QIRT +M
Sbjct: 280 CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIG---PEGRPLEIQIRTHQMHE 336
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+AE G+AAH++ + T V A + + LN ++E E
Sbjct: 337 VAEYGVAAHWAYKEGKTNGVDQASQDSKK-------------------LNVVKEILELRS 377
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+ + EF+ I D+ +V+ FTP+G+ +PKGA +D AY IHTE+GN AKVN
Sbjct: 378 ESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVN 437
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
G ++ + + N ++V+I+T S S+ + W++ TR AR+KI +F R
Sbjct: 438 GRIIPLNYEIKNGDIVDILT-----SSSSAGPSRDWMDLVSTRRARNKIRQFFR 486
>gi|373106414|ref|ZP_09520717.1| RelA/SpoT family protein [Stomatobaculum longum]
gi|371652789|gb|EHO18197.1| RelA/SpoT family protein [Stomatobaculum longum]
Length = 754
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 313/539 (58%), Gaps = 56/539 (10%)
Query: 126 SPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
P+ L+E+L I P ++ L+ RA M A AH QKR+SGEP+IIHP+ VA IL +
Sbjct: 17 DPDLLYEELIAAIERYHPSDDTSLIHRAYMTAKNAHMDQKRKSGEPYIIHPLCVAIILAD 76
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
LELD E+I AGLLHD VEDT ++T E+I FG V +V+G TK++++ K
Sbjct: 77 LELDKETIIAGLLHDVVEDT-ILTREQISRVFGEDVAVLVDGVTKLTQITWTTDK----- 130
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
D++A++LR+MFLAM++++RVI++KLADRLHNMRTL HM P KQ A ETL+++APLA
Sbjct: 131 -LDIQAENLRKMFLAMSQDIRVILIKLADRLHNMRTLQHMRPEKQREKAKETLEIYAPLA 189
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ-F 363
LG+ ++K EL++L+ Y + Y ++ ++ + K H E ++L I + Q
Sbjct: 190 DRLGISRLKVELDDLALRYLEPKAYRDLEEKIEE--KSHSTE-----RLLETIIAEVQGI 242
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
++ + + + K +SIYK ++ + +E+ + +R++++
Sbjct: 243 MNSSKIPSSVIGRRKHIFSIYKKMVNQHKTFDEIYDLFAVRVLVQ------------DLN 290
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LG +H +TP+ KDYIA PKPN YQSLHTT+ L+ + EVQIRT EMD
Sbjct: 291 DCYAALGQLHVHFTPLSERFKDYIARPKPNRYQSLHTTV---LFHNGTPFEVQIRTYEMD 347
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+AE GIAAH+ + +G+ L A ++ WL I EWQ E
Sbjct: 348 KVAEYGIAAHWKYK--------------EKAKGENPTLTGGE-AEKMRWLRQILEWQREM 392
Query: 544 VGNMTSREFVDTITRDL--LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
N +EF+ + +L V+ FTP G++K LP G+T +D+AY IH+ +GN MV A
Sbjct: 393 PDN---KEFLSDVKNELNPFADMVYAFTPGGDVKTLPTGSTPIDFAYSIHSAVGNCMVGA 449
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VNG +V + + N + +EI+T S+++ + WL+ AK+ AR+KI ++ + +
Sbjct: 450 RVNGRMVPLDYQIQNGDRIEILT-----SQNSRGPSRDWLKQAKSSQARNKINQWFKTE 503
>gi|218281321|ref|ZP_03487809.1| hypothetical protein EUBIFOR_00374 [Eubacterium biforme DSM 3989]
gi|218217506|gb|EEC91044.1| hypothetical protein EUBIFOR_00374 [Eubacterium biforme DSM 3989]
Length = 734
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 298/525 (56%), Gaps = 49/525 (9%)
Query: 143 PNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVE 202
P +EL+++A A+E H GQ R+SGEP++IH ++VA L + ++IAAGLLHDTVE
Sbjct: 23 PENIELIQKAYDFAYEHHKGQFRKSGEPYVIHVIQVANTLALMHCGPKTIAAGLLHDTVE 82
Query: 203 DTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTE 262
D VT + I E FG + +V+ V+K+G +K K+E ++ A + R++F+AM +
Sbjct: 83 DCQGVTTDTITELFGQEIATLVDA---VTKIGAIKFKDE----EEYLASNHRKLFIAMAK 135
Query: 263 EVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFM 322
++RVI++KLADRLHNMRTL +M P KQ IA ETL V+AP+A LG+ +IK+ELE+LSF
Sbjct: 136 DIRVILIKLADRLHNMRTLQYMRPEKQKKIARETLSVYAPIAHRLGISEIKNELEDLSFK 195
Query: 323 YTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
Y + + Y ++K DL K+ E + E ++ IE + ++ I K YS
Sbjct: 196 YLDYKKYEEIK----DLVKQRESDRNEQVHEMISDIE--SIMQEYNIQYRIFGRSKHFYS 249
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
IYK ++ E+ + +RI+ S V CY +LG +H + PIP
Sbjct: 250 IYKKMVTKNKRFEEILDLLAIRIVTD----SVVH--------CYEILGYIHAKYRPIPGR 297
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTG 502
KDYIA PK N YQSLHTT++ + ++F E+QIRTEEMD IAERG+AAH+
Sbjct: 298 FKDYIAMPKANMYQSLHTTIVEPEHGNIF--EIQIRTEEMDAIAERGVAAHWK------- 348
Query: 503 LVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ R T I ++SW +E + E+++ + +D+
Sbjct: 349 --------YKENRNYTPEYEQKEIEDKLSWFRDFSMMTDE--ESEDPLEYMNVLQKDIFE 398
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
+ V+ TPRG++ LP G+ +D+AY IHTE+GNK V AKVNG +V L +VV+I
Sbjct: 399 ANVYCLTPRGKVIALPSGSCPIDFAYRIHTEVGNKTVGAKVNGAIVPLNTPLKTGDVVDI 458
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
+T N SA W++ K+ AR+KI FL++Q S E
Sbjct: 459 LTNNNSVGPSA-----DWIKIVKSGHARNKIRAFLQKQEQQSRKE 498
>gi|440780767|ref|ZP_20959238.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
gi|440221355|gb|ELP60560.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
Length = 736
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 303/548 (55%), Gaps = 58/548 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
+ +A A AH QKR SGEP+IIHP EVA IL E+ +D +IAAGLLHD +EDT
Sbjct: 20 FINKAYNFAMNAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEY- 78
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E + EF V +VEG V+KLGK+ K + ++ +AD++R+M LAM +++RVI
Sbjct: 79 THEDLTREFNGEVANLVEG---VTKLGKISYKTK----EEQQADNVRKMLLAMAKDIRVI 131
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
++KL+DRLHNMRTL +M KQ A ETL +FAPLA LG+ +IK ELE+L+F Y
Sbjct: 132 LIKLSDRLHNMRTLKYMSASKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYIKPN 191
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+Y ++ +A+ E E+ + L K +ED + +I K YSIY+ +
Sbjct: 192 EYYELVDDIAEKRVEREEYIRGIISELYKNLEDANIM------ADIDGRPKHFYSIYRKM 245
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ +++++ + +RI L + + CY VLG+VH ++ PIP KDYI
Sbjct: 246 VNKNKTLDQIFDLTAIRI------------LVNDIRECYTVLGIVHTMYKPIPGRFKDYI 293
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
A PKPN YQSLH+T+I +S E+QIRT EM AE GIAAH+ + G+V
Sbjct: 294 AMPKPNMYQSLHSTVIGPQGKS---FEIQIRTYEMHKTAEYGIAAHWK---YKEGIV--- 344
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
G +G V + A+ +++W+ + +WQ+E EF++ DL VFV
Sbjct: 345 --EGTDNKG--VEIEKADFDTKLTWVREMLDWQKE---TTNPEEFMENFKIDLFEDEVFV 397
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNA 627
FTP+G + +LP AT VD+AY IHT+IGN+ V AKVNG +V + L E+VE++T
Sbjct: 398 FTPKGSVISLPSEATPVDFAYKIHTDIGNRCVGAKVNGRIVPLDYKLKTGEIVEVLTSGI 457
Query: 628 LSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEIT-------ADTVGDF 676
+ QWL K+ A+ KI + RE+ EI +F
Sbjct: 458 DKGPNI-----QWLNSVKSNQAKIKIKAWFKKAKREENITRGKEIVEKEAKKQGHNFAEF 512
Query: 677 VADSGEES 684
+ + G ES
Sbjct: 513 IKEIGLES 520
>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 744
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 296/522 (56%), Gaps = 58/522 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYL + + + RA +A +AH QKR SGEP+I+HP+ VA IL L++D ++ A LLH
Sbjct: 31 SYLDEADCKEIMRAFEVADKAHAPQKRASGEPYILHPLAVATILANLQIDATTVIAALLH 90
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T +IEE FG V +V+G TK+++ + H+ +D + ++ R+M L
Sbjct: 91 DVVEDTEY-TLPQIEELFGKEVAFLVDGVTKLNQF-------QYHTKEDQQLENYRKMIL 142
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++VRV+++KL DRLHNMRTL HM KQ IA ETL++FAPLA LG++ IK ELE+
Sbjct: 143 AMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELED 202
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y + Y + ++ + E+ + + + L K +ED +K +++ K
Sbjct: 203 LSFRYLEPDKYYDLVEQMQEKRHVREEIVNDTMEQLKKALEDAH------IKADVKGRPK 256
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + K ++++ + +R+I+ P CY VLG+VH +W P
Sbjct: 257 HFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD------------CYAVLGIVHNLWKP 304
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + S +E+QIRT EM ++E G+AAH+ +
Sbjct: 305 LPYRFKDYIAMPKSNMYQSLHTTIIGTMGHS---VEIQIRTWEMHRVSEYGVAAHWRYKE 361
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G + + ++ WL + EWQ+ +E V+ +
Sbjct: 362 GNKG-------------------GDKDFDQKVGWLRQVLEWQDA----SNPKELVNALKL 398
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ LPKGA +D+AY IHT++G+ V AKVNG +VS + L N +
Sbjct: 399 DVFSGEVFVFTPRGDVLKLPKGAVPLDFAYRIHTDVGHHCVGAKVNGKIVSLDYTLQNGD 458
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V+IIT + + K + WL + +R KI + +++
Sbjct: 459 IVDIIT--SKTGKPSL----DWLNIVGSTESRSKIRNWFKKE 494
>gi|373495922|ref|ZP_09586472.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
gi|404369252|ref|ZP_10974596.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
gi|313688538|gb|EFS25373.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
gi|371966563|gb|EHO84049.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
Length = 726
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 300/517 (58%), Gaps = 62/517 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+LE ++ AL A E H+GQ R+SGE +I+HPVEV +IL ++++D ++I AG+LHD VEDT
Sbjct: 19 DLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKMDTDTIVAGILHDIVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKL-GKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
++T I+ FG TV +V+G TK+ L K ++EN +R+M LAM +
Sbjct: 79 -LITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQDEN----------IRKMILAMAQN 127
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RVII+KL+DRLHNMRTL +M P KQ +I+ ETL ++APLA LG+ +IK ELE+L Y
Sbjct: 128 LRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAHRLGIAKIKWELEDLCLRY 187
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
E+Y +K + E + +E K ++K + D +K ++ K YSI
Sbjct: 188 LKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHD------TGIKGNVKGRFKHFYSI 241
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
YK + + +++ + +RII+ + CY+ LG++H + P+P
Sbjct: 242 YKKMYEKGKEFDDIYDLMGVRIIV------------DTEGECYNTLGVIHSHFRPVPGRF 289
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KDYIA PK N YQS+HTT++ L + +E+QIRTE+MD +AE GIAAH+S
Sbjct: 290 KDYIAVPKSNNYQSIHTTIVGPLGKF---IEIQIRTEDMDRVAEEGIAAHWS-------- 338
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+ + +G V WL I E Q E +++F+ ++T D++
Sbjct: 339 ---YKEKTKVTKGDQVY----------GWLRNILELQNE---AEDTQDFIKSVTEDIMNE 382
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVF+P+G+I LP+G+T +D+A+ IHT+IG K V AKVNG +V+ + L N + VEII
Sbjct: 383 TVFVFSPKGDILELPQGSTPLDFAFAIHTQIGCKCVGAKVNGKIVTLDYKLQNGDRVEII 442
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
T +K++ K WL+ T A+ KI K L+EQ
Sbjct: 443 T-----AKNSKGPAKDWLDIVVTHGAKSKIRKLLKEQ 474
>gi|338730836|ref|YP_004660228.1| (p)ppGpp synthetase I SpoT/RelA [Thermotoga thermarum DSM 5069]
gi|335365187|gb|AEH51132.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga thermarum DSM 5069]
Length = 710
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 303/522 (58%), Gaps = 59/522 (11%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
S ++E + +A LA AH+G+ R SGEPF+ HPVEV +IL ++ +D E++ A LLHD
Sbjct: 19 FSEEDIEKLEKAYRLAVYAHEGKYRESGEPFVTHPVEVCKILAQMNVDIETLIAALLHDV 78
Query: 201 VEDTN-VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VED++ V E IE+EFG + RIV+G TKVS+L +++ +K + +++M A
Sbjct: 79 VEDSDGKVKLEDIEKEFGKQIVRIVDGVTKVSRLNAPVGASDSR----LKLETIQKMLFA 134
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPH-KQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
M E++RVI VKLADRLHNMRT+ ++ K++ A ETL+++AP+A LG+Y IK ELE+
Sbjct: 135 MAEDIRVIFVKLADRLHNMRTIEYVKDESKKAYKALETLEIYAPIAHKLGIYSIKWELED 194
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF + E+Y +K VA+ KE E+ ++E + L + + + + K
Sbjct: 195 LSFKVLHREEYNMIKSLVAEKKKEREQRIKEYIETLKAALLEHDIV------ATVEGRFK 248
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +E+ + +R I++ P CY VLG+VH IW P
Sbjct: 249 HYYSIWQKLKEKGKDFSEIYDLFGVRAIVEDIPT------------CYTVLGIVHSIWKP 296
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P +KDYIA PK NGY+SLHTT+I E LEVQIR ++M AE G+ AH+ +
Sbjct: 297 LPGRIKDYIAAPKSNGYRSLHTTVITGYGEP---LEVQIRDKQMHAEAEYGLIAHW---I 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G+ N+ + W+ + EW++E ++ V+ + +
Sbjct: 351 YKEGI---------------------NVKVMQKWVTQLLEWRKELAKDLAG---VEDLKK 386
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
+L VFVFTP+GEIK+LP GAT +D+AY +HT+IG++ AKVNG LV + L N +
Sbjct: 387 ELQMDEVFVFTPKGEIKHLPVGATPIDFAYAVHTDIGHRFAGAKVNGKLVPINYQLQNGD 446
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEII +KS + WL++AK+ + KI KF REQ
Sbjct: 447 IVEIIV-----NKSGPRPSLDWLKYAKSPRTKAKIRKFFREQ 483
>gi|377809688|ref|YP_005004909.1| GTP pyrophosphokinase [Pediococcus claussenii ATCC BAA-344]
gi|361056429|gb|AEV95233.1| GTP pyrophosphokinase [Pediococcus claussenii ATCC BAA-344]
Length = 742
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/523 (38%), Positives = 303/523 (57%), Gaps = 57/523 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + V++A A H Q+R+SGE +I+HP++VA IL L++ E++A+G LHD
Sbjct: 19 YMNKDHVAFVQKACDFASYVHREQRRQSGEAYIMHPIQVAGILANLKMYPETVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT ++T I+E FG V IV+G VSK+ K+K K S Q+ A++ R++ LA
Sbjct: 79 TVEDT-LITLGDIQELFGKDVAVIVDG---VSKISKIKYK----SNQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ I+ ETL+++APLA+ LG+ IK ELE+
Sbjct: 131 MSKDIRVIIVKLADRLHNMRTLEHLRPEKQRRISNETLEIYAPLAERLGISTIKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL--DLMTVKTEIRSVC 377
S Y N + Y R+ L + EE + K I+D + DL TEI
Sbjct: 191 SLRYLNPQQYY----RIVHLMNSRRTQREE---YINKAIDDIKVAVDDLGLEYTEIYGRP 243
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YS+Y+ ++ +++ + +R+I + CY +LG +H W
Sbjct: 244 KHIYSVYRKMVDQHKQFSQIYDLLAIRVI------------TDSIRDCYAILGAIHTKWK 291
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PK N YQSLHTT++ LEVQIRTEEM +AE G+AAH++ +
Sbjct: 292 PMPGRFKDYIAMPKANMYQSLHTTVVG---PEGRPLEVQIRTEEMHRVAEYGVAAHWAYK 348
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
GKT + + +++W I E Q++ + + +F++ +
Sbjct: 349 -----------------EGKTDKVEEDSAGDKLNWFKEIVELQDD---SRDAADFMEGVK 388
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL G RV+ FTP+G++ LPKG+ +D AY+IHTE+GN+ AKVNG +V + + N
Sbjct: 389 GDLFGDRVYAFTPKGDVFELPKGSGPLDMAYIIHTEVGNRTTGAKVNGKIVPLDYSIKNG 448
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++V+I+T S ++ + WL+ TR AR+KI +F R+Q
Sbjct: 449 DIVDIMT-----SSNSVGPSRDWLKLVSTRRARNKIKQFFRQQ 486
>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
Length = 719
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/525 (38%), Positives = 305/525 (58%), Gaps = 59/525 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY S ++E + +A A AH GQ R SGE +IIHPV+VA IL +L +D +I AGLLH
Sbjct: 12 SYTS-EDVEYINKAYEFAENAHRGQARVSGEAYIIHPVQVALILADLGMDASTICAGLLH 70
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ T++ + + FG + +VEG V+KLGKL E S ++ +A++LR+MF+
Sbjct: 71 DVLEDTDY-TYDDLAKLFGKEIADLVEG---VTKLGKL----EFQSKKEAQAENLRKMFI 122
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++VRVI++KLADRLHNMRTL ++ Q A ET++++APLA LG+++IK ELE+
Sbjct: 123 AMAKDVRVIMIKLADRLHNMRTLRYLDKESQLRNAQETMEIYAPLAHRLGIFKIKWELED 182
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y + E Y + +VA K+ E+ + + L ++I + ++ + K
Sbjct: 183 LSLRYLDPEAYYDLVDKVAAKRKQREEYINQVITALKERIAE------TGIEATVDGRPK 236
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + + ++ + +R+I+ + + CY VLGL+H IW P
Sbjct: 237 HFYSIYKKMKYQGKAFEQIYDLMAVRVIV------------NTVRDCYAVLGLIHTIWKP 284
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PKPN YQSLHTT++ E +E+Q+RT +M AE GIAAH+ +
Sbjct: 285 IPGRFKDYIAVPKPNMYQSLHTTVVGPQGEP---VEIQVRTWDMHRTAEYGIAAHWKYK- 340
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GR L N ++ +++WL I EWQ + + + EFV+++
Sbjct: 341 -----------EGR--------LKNTDLDSKLAWLRQILEWQSD---DRDADEFVESLKV 378
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V VFTP+G++ +LPKG+T +D+AY IH+ +GN+ + AKVNG +V L +
Sbjct: 379 DLFSDEVLVFTPKGDVIDLPKGSTPLDFAYAIHSAVGNRCIGAKVNGKIVPLDSELQTGD 438
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMK-FLREQAA 662
+VEI+T + S WL+ KT A+ KI + F +EQ A
Sbjct: 439 IVEILTSPTVKGPSL-----DWLKIVKTSQAKSKINQWFKKEQKA 478
>gi|407477775|ref|YP_006791652.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
gi|407061854|gb|AFS71044.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
Length = 732
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 303/523 (57%), Gaps = 59/523 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ E++ + RA A + H+GQ RRSGEP+IIHPV+VA IL ++ LD +I A LLHD
Sbjct: 19 YMTEAEVKDIERAYQFAKDEHEGQFRRSGEPYIIHPVQVAGILVDIGLDATTIVAALLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T E + E FGA V +V+G V+KLGK+K K++ + A++ R+MF+A
Sbjct: 79 VVEDTDI-TLEELTERFGADVTMLVDG---VTKLGKIKYKSKREEL----AENHRKMFIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M E++RVI++KLADRLHNMRTL HM KQ A ETL++FAPLA LG+ IK ELE++
Sbjct: 131 MAEDIRVILIKLADRLHNMRTLQHMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDLMTVKTEIRSVC 377
S Y N + Y R+ + K+ E E L+ + D ++ L+ + + ++
Sbjct: 191 SLRYINPQQYY----RIVSMMKQKRTEREA----LVTSVIDEVNEVLEEVEIAADVDGRP 242
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY + S+ +E+ + +RII+ + CY VLG++H +
Sbjct: 243 KHIYSIYNKMQNSKKEFSEIYDLMAVRIIV------------DSIKDCYAVLGIIHTQYK 290
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PKPN YQSLHTT+I E LEVQIRT +M IAE GIAAH+
Sbjct: 291 PMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTRDMHFIAEYGIAAHW--- 344
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
A G+ K+ +I+ I E Q++ + EF++++
Sbjct: 345 ---------AYKEGKEQEAKS------GFEDKIAHFREILELQKD---TADAEEFMESVK 386
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
D ++VFTP+G++ LPKG+ +DYAY IHTEIG++ + AKVNG +V + L
Sbjct: 387 VDFFSDMLYVFTPKGDVIELPKGSVPIDYAYRIHTEIGHRTIGAKVNGRMVPIDYKLKTG 446
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T SK ++ K WL+ + A++KI ++ + Q
Sbjct: 447 DIIEIVT-----SKHSYGPSKDWLKICVSSQAKNKIRQWFKRQ 484
>gi|328957461|ref|YP_004374847.1| GTP pyrophosphokinase [Carnobacterium sp. 17-4]
gi|328673785|gb|AEB29831.1| GTP pyrophosphokinase (RelA/SpoT) [Carnobacterium sp. 17-4]
Length = 736
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 305/524 (58%), Gaps = 54/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T++Y++ + + V++A A AH Q R+SGEP+IIHP++VA IL EL++D ++A G
Sbjct: 16 TVTYMNSSHVAFVKKACDFATNAHKDQFRKSGEPYIIHPIQVAGILAELKMDPVTVATGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT TFE I EF V +V+G V+KLGK+K K S ++ +A++ R+M
Sbjct: 76 LHDVVEDTEY-TFEDISREFSPEVAMLVDG---VTKLGKIKYK----SHEEQQAENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
LAM +++RVI+VKLADRLHN+RTL P KQ IA ETL+V+APLA LG+ IK EL
Sbjct: 128 LLAMAKDLRVIMVKLADRLHNLRTLKFHRPEKQRRIANETLEVYAPLAHRLGINLIKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+ S Y N + Y ++ + +E EK + ++ + KIE+ ++ + + +I
Sbjct: 188 EDTSLRYLNPQQYYRIVHLMNSKREEREKYITDS----ISKIEES--VEELNISADITGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R+I+ + CY VLG +H W
Sbjct: 242 PKHIYSIYRKMRDQKKQFDQIYDLLAIRVIV------------DSIKDCYAVLGAIHTRW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQS+HTT+I E +EVQIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIAMPKSNMYQSIHTTVIG---EFGKPIEVQIRTKEMHAVAEYGVAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ G T + + + +ISW I E Q+E + + +F++++
Sbjct: 347 K-----------------EGITRKVEDDSDGKKISWFRDIIELQDE---SSDASDFMESV 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ +V+VFTP+G++ LP GA +D+A+ IHTEIGNK AKVNG +V + L
Sbjct: 387 KEDIFKDKVYVFTPKGDVSELPSGAGPLDFAFNIHTEIGNKTTGAKVNGKIVPLNYKLKT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+++EI+T S +++ + W+ T A++KI +F + Q
Sbjct: 447 GDIIEILT-----SPNSYGPSRDWINLVSTSKAKNKIKRFFKLQ 485
>gi|398342460|ref|ZP_10527163.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
inadai serovar Lyme str. 10]
Length = 674
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 311/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ E L E +R L P LELV +A ++ EAH GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKEMLLEGVR---DRLGPESLELVEKAYKVSEEAHQGQFRLSGEPYIVHPLQVGYILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I+AG+LHD +EDT T + + +FG + ++VEG TK+S++ ++ S
Sbjct: 66 GLDEKVISAGILHDVIEDTKY-TRDNMVSDFGTEITQLVEGVTKISEI-------KSQSR 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS PP KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y++KSELE+L+F E+Y +K+R+ E E+ +++ IL +++ +
Sbjct: 178 RLGIYKVKSELEDLAFQVIYPEEYQDIKKRINVKKSEREEYIDKLQIILKQRLAE----- 232
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ + ++ K +SIY+ + + +E+ + +RII + C
Sbjct: 233 -ININAQVDGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRII------------TDEIKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +WTP+P KDYIATPK N YQSLHTT+I LEVQIRT EM+ I
Sbjct: 280 YGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTAEMNAI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + G N R L + WL ++ WQ+
Sbjct: 337 AEFGIAAHWVYK------EGKTHANERH--------------LTVKWLEVLQSWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +EF++ + DL VFVFTP+GEI LPKGATV+D+A+ IHT++G AK+N
Sbjct: 374 ALDPKEFLEELKYDLHEDEVFVFTPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGAKINS 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + VE++ + S S WL +T SAR K+ + R
Sbjct: 434 RMIPLRTELRSGDQVEVVV-DKRSKPSPI-----WLRIVRTTSARQKLRAYFRKLREESR 487
Query: 659 ---EQAALSASEIT 669
E A SA+E+T
Sbjct: 488 KDLEHGAESAAELT 501
>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
arbusti SL206]
Length = 736
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/513 (38%), Positives = 295/513 (57%), Gaps = 47/513 (9%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
+ + +A A +AH QKR SGEP+IIHP EVA IL E+ +D +IAAGLLHD +EDT
Sbjct: 19 DFINKAYNFAVDAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEY 78
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
++E + EF + V +VEG V+KLGK+ K + ++ +AD++R+M LAM +++RV
Sbjct: 79 -SYEDVTREFNSEVADLVEG---VTKLGKISYKTK----EEQQADNVRKMLLAMAKDIRV 130
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I++KL+DRLHNMRTL +M KQ A ETL +FAPLA LG+ +IK ELE+L+F Y
Sbjct: 131 ILIKLSDRLHNMRTLRYMSVKKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYMKP 190
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
+Y ++ +++ E E+ +++ L K +E+ L +I K YSIY+
Sbjct: 191 NEYYELVDDISEKRVEREEYIKDIVVDLHKNLEEANIL------ADIDGRPKHFYSIYRK 244
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
++ +++++ + +RI L + + CY VLG+VH ++ PIP KDY
Sbjct: 245 MVNKNKTLDQIFDLTAIRI------------LVNDIRECYTVLGIVHTMYKPIPGRFKDY 292
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
IA PKPN YQSLH+T+I +S E+QIRT EM AE GIAAH+ + G+
Sbjct: 293 IAMPKPNMYQSLHSTVIGPQGKS---FEIQIRTYEMHKTAEYGIAAHWK---YKEGITEE 346
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
A P A+ +++W+ + +WQ+E EF+++ DL VF
Sbjct: 347 ADSKDSEPV-------KADFNTKLTWVREMLDWQKE---TTNPEEFMESFKIDLFEDEVF 396
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VFTP G++ NLP AT VD+AY IHT+IGN+ + KVNG +V + L E+VE++T
Sbjct: 397 VFTPNGKVINLPSEATPVDFAYKIHTDIGNRCIGGKVNGKIVPLDYKLKTGEIVEVLTSG 456
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ QWL K+ A+ KI + ++
Sbjct: 457 ITKGPNI-----QWLNSVKSNQAKVKIKSWFKK 484
>gi|314933798|ref|ZP_07841163.1| GTP diphosphokinase [Staphylococcus caprae C87]
gi|313653948|gb|EFS17705.1| GTP diphosphokinase [Staphylococcus caprae C87]
Length = 734
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 298/510 (58%), Gaps = 54/510 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 16 EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 75
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE +++ F V RIV+G TK+ K+ K + K E +A+
Sbjct: 76 IVAGFLHDVIEDTPY-TFEDVKDMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 127
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 128 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 187
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y ++ Y R+ +L K+ E E + KIE + ++ M +
Sbjct: 188 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAINKIEAE--MEKMNLSG 241
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +RII+ + CY +LGL
Sbjct: 242 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NSINDCYAILGL 289
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+A
Sbjct: 290 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 346
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GKTV + +++WL +E E + ++E
Sbjct: 347 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDRTSTDAQE 386
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 387 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 446
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWL 641
+VL +++EI T SK ++ + WL
Sbjct: 447 YVLQTGDIIEIRT-----SKHSYGPSRDWL 471
>gi|223044113|ref|ZP_03614152.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|417907908|ref|ZP_12551675.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
gi|222442507|gb|EEE48613.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|341594995|gb|EGS37673.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
Length = 729
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 298/510 (58%), Gaps = 54/510 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE +++ F V RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKDMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y ++ Y R+ +L K+ E E + KIE + ++ M +
Sbjct: 183 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAINKIEAE--MEKMNLSG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +RII+ + CY +LGL
Sbjct: 237 EINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GKTV + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDHTSTDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWL 641
+VL +++EI T SK ++ + WL
Sbjct: 442 YVLQTGDIIEIRT-----SKHSYGPSRDWL 466
>gi|297206072|ref|ZP_06923467.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
gi|297149198|gb|EFH29496.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
Length = 744
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 293/521 (56%), Gaps = 55/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V RA A +AH GQKR SG+P+IIHP +VA L L LD +++AAG LHD
Sbjct: 19 YMNKEQLAFVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT+V T + I+ EFG V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDTSV-TNDDIKREFGEDVAFIVDGVTKLNKY-------EYKSHEEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P K IA+ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAKDLRVIMVKLADRLHNMHTLDHLRPDKHRRIASETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N E Y + ++ E E +E A L LD + +K +I K
Sbjct: 191 SLHYLNPEAYYNIVNQMNSKRSEREGYIETAIAYLKDT------LDSLHIKYDIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I++ + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFSEIFDLLAVRVIVQ------------NVRDCYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTQQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+G T + + ++ I E ++E + EF+ ++ D
Sbjct: 348 ---------------KGDTQAVEATSAGRKLDMFREILELKDE---TSNADEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ V+VFTP+G++ L KG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDSVYVFTPKGDVYELAKGSVPLDFAYAIHTQVGSHAVGAKVNDKLVPLDYRLKNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
V I+T +S + W+ KT AR+KI +FL+EQ
Sbjct: 450 VSILT------QSNAEPSPDWMNMVKTSRARNKIRRFLKEQ 484
>gi|354558097|ref|ZP_08977353.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548822|gb|EHC18266.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
Length = 726
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 299/523 (57%), Gaps = 56/523 (10%)
Query: 138 ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLL 197
+ ++ P E L +A A +AH GQ R SGE +I HP+EVA+IL ELE+D +IAA LL
Sbjct: 10 LKHVFPQESGLAEKAYYFAEKAHRGQLRNSGEDYIQHPLEVAKILLELEMDEATIAAALL 69
Query: 198 HDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMF 257
HD VEDT T E IE+EFG V +V+G V+KLG++ K + + ++LR+MF
Sbjct: 70 HDVVEDTPY-TIEDIEKEFGPQVALMVDG---VTKLGRIPYKTKVEQ----QVENLRKMF 121
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
LAM +++RVI++KLADRLHNMRTL + KQ IA ET+++FAPLA LG+++IK ELE
Sbjct: 122 LAMAKDIRVILIKLADRLHNMRTLKYHSHEKQKEIAQETIEIFAPLANRLGIFRIKWELE 181
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
+LSF Y ++Y + +A +E E ++ E + L ++ + + + EI
Sbjct: 182 DLSFRYLKPQEYYDLSEGIAFKRREREDQINEVIEQLRHRLGE------VGIHAEIAGRP 235
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K YSIY+ ++ ++E+ + +R+I+ CY LG++H +W
Sbjct: 236 KHFYSIYRKMVTQNKELSEIYDLTAVRVIV------------DSVNDCYGALGIIHTMWK 283
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P+P KDYIA PKPN YQSLHTTL+ E E+QIRT EM AE GIAAH+ +
Sbjct: 284 PLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEP---FEIQIRTWEMHRTAEYGIAAHWKYK 340
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
+ G + ++SW+ + EWQ + + + EF++++
Sbjct: 341 EGSKSISG-------------------SFDQKLSWIRQLLEWQHD---SKDAGEFMESLK 378
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL VFVFTP+G++ LP G+ +D+AY +HT++G++ V AK+N +V L N
Sbjct: 379 IDLFSDTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCVGAKINSRIVPLDSKLVNG 438
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++VEI+T SK + K WL KT A+ +I ++ +++
Sbjct: 439 DIVEILT-----SKQSNGPSKDWLSFVKTSQAKSRIRQWFKKE 476
>gi|225871285|ref|YP_002747232.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
gi|225700689|emb|CAW95287.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
Length = 739
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 307/521 (58%), Gaps = 54/521 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ ++ELV++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++ G LHD
Sbjct: 19 YMTDGDVELVQKALDYATAAHFYQVRKSGEPYIVHPIQVAAILADLHLDAVTVVCGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T E IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLEDIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
+F Y N ++ K ++ + +E +E E ++ KI+ + + ++ K
Sbjct: 191 AFRYLNEIEFYK----ISHMMREKRREREALVDDIVTKIK--AYTTDQGLYGDVYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YS+Y+ + + +++ + +R +++ Q Y ++G +H +W P+
Sbjct: 245 IYSVYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAAPKTNGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK-- 346
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+ RGK +N + ++W+ + E Q N ++ FVD++ D
Sbjct: 347 ------------KGIRGK---VNQVEQKVGMNWIKELVELQA--ASNGDAKGFVDSVKED 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ R++VFTP G ++ LPK + +D+AY +HT++G K AKVNG +V T L +V
Sbjct: 390 IFSERIYVFTPTGAVQELPKDSGPIDFAYAVHTQVGEKATGAKVNGRMVPLTAKLKTGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 450 VEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
Length = 716
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 300/528 (56%), Gaps = 59/528 (11%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L EDL + YL +++ +R A E H+GQ R+SGEP+ IHP+E A++L +L+LD
Sbjct: 9 LVEDLIKKVDYLEDQDIQKIREAAYYIIEKHEGQFRKSGEPYYIHPIEAAKVLADLKLDR 68
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+I AGLLHD VEDT+ T + I+E FG TV IV+G TK+ K N N S ++ +
Sbjct: 69 TTIIAGLLHDVVEDTDT-TIDEIKERFGETVALIVDGVTKIGKY------NFN-SKEEAE 120
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++ R+M ++M +++RVI+VKLADRLHN+RTL +P +KQ IA ETL ++APLA LG+
Sbjct: 121 AENFRKMLVSMAKDIRVILVKLADRLHNIRTLDPLPEYKQKRIAKETLDIYAPLAARLGL 180
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
++IK+ELE+ SF Y E Y K+ +A+ EK L+E ++ +I D LD +
Sbjct: 181 WKIKAELEDTSFKYLYPEAYKKITTYLAESKTVQEKYLQE----IISQIRD--VLDKHNI 234
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
K +I+ K YSIY+ L+ S++++ + +R+ L + CY L
Sbjct: 235 KADIQYRAKHLYSIYEKTLRKDLSLSDIYDVYGVRV------------LVHTIKDCYLAL 282
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
GL+H +W P+P KDYI+ PK N YQ+LHTT++ + F +E+QI+T +M IAE G
Sbjct: 283 GLIHSLWPPVPGRFKDYISLPKSNMYQALHTTVVA--PKGKF-VEIQIKTYKMHRIAEEG 339
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ R GK + + +WL I E +E
Sbjct: 340 IAAHW-----------------RYKGGKYISEKDLK---SFTWLRNILESIKE----NKD 375
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
E + T+ DL V+VFTP+G++ LP G+T VD+AY IHT++G++ AKVNG +V
Sbjct: 376 TEIISTVKGDLSNEEVYVFTPKGDLVKLPLGSTPVDFAYQIHTQVGHRTAGAKVNGKMVP 435
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
L N +VVEIIT + + WL+ + A+ I ++
Sbjct: 436 LDTKLKNGDVVEIIT------AKYHKPSRDWLKFVVSSKAKTSIKQYF 477
>gi|218782928|ref|YP_002434246.1| (p)ppGpp synthetase I SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
gi|218764312|gb|ACL06778.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
Length = 713
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 295/537 (54%), Gaps = 65/537 (12%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
+D +++W+ Y + +L+ RA + + HDGQ R SGEP++ HP+EVA IL
Sbjct: 5 QDIIDKVWD-------YNPDADFDLIERAYIFSARVHDGQVRLSGEPYLSHPLEVAGILA 57
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
++ LD SI AGLLHD VEDT+ T E+I+ FGA + IV+G TK+SKL
Sbjct: 58 DMHLDVTSIGAGLLHDVVEDTHA-TPEQIDSMFGADMAHIVKGVTKLSKLS-------FR 109
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S Q+ +A+ +R+M LAM +++RV+++KLADR+HNMRTL +KQ IA ETL ++AP+
Sbjct: 110 SSQERQAESIRKMILAMADDIRVVLIKLADRVHNMRTLQFQKENKQVRIAQETLDIYAPI 169
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+Y IK ELE+ S MY E Y +++ E + +E+ IL K+ +
Sbjct: 170 AGRLGIYWIKQELEDRSSMYLYPEQYREIENLQNQKKHERDAYVEKVKGILHDKLGE--- 226
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+K +I K YSIY +L+ EV I R+I+ P
Sbjct: 227 ---AGLKGQILGRYKSFYSIYNKMLQQNLEFEEVYDIIAFRVILDTIPQ----------- 272
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LGLVH IW PI + KDYI PKPN YQSLHTT+I E R+E+QIRT+EMD
Sbjct: 273 -CYEALGLVHNIWKPIAKKFKDYIGNPKPNMYQSLHTTVIGPFGE---RMEIQIRTQEMD 328
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
+A+ GIAAH+S + G+ KT +W+ I E Q+
Sbjct: 329 AVAKSGIAAHWSYK------------EGKQADEKT--------RQAFAWIQDIVEHQKNV 368
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+EF++ + +L V+VFTP G++K LP+GAT +D+AY IH+E+GN AKV
Sbjct: 369 ---KDPQEFLENVRIELFPDEVYVFTPAGDVKALPRGATPLDFAYAIHSEVGNHCTGAKV 425
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V L + VEI T + K WL H KT AR +I ++++ +
Sbjct: 426 NGRMVPLRTELKTGDSVEIRT------QKKGHPSKDWLLHVKTVKARTRIRQWIKTE 476
>gi|389578358|ref|ZP_10168385.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfobacter postgatei
2ac9]
gi|389399993|gb|EIM62215.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfobacter postgatei
2ac9]
Length = 727
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 294/529 (55%), Gaps = 64/529 (12%)
Query: 133 DLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
D+ I SP+ ++ L+ RA + + H+GQ R SGEP++ HP+EVA IL +++LD ES
Sbjct: 6 DILDKIYEYSPDADVSLIDRAYIYSARVHEGQVRLSGEPYLSHPLEVANILADMKLDMES 65
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV--K 249
IAA LLHD +EDT T E I + FG V IVEG TK+S L H+ V +
Sbjct: 66 IAAALLHDVIEDTPA-TKEDIADMFGPGVAHIVEGVTKLSAL---------HASTKVAQQ 115
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLS-HMPPHKQSSIATETLQVFAPLAKLLG 308
A+ LR+M LAM +++RV+++KLADRLHNMRTL H P KQ++IA ETL ++AP+A LG
Sbjct: 116 AESLRKMILAMADDIRVVLIKLADRLHNMRTLKYHKKPEKQAAIAQETLDIYAPIAARLG 175
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
++ IK+ELE ++F YT E++ ++ V E E + E + L K+E+ M
Sbjct: 176 IFWIKNELEEIAFFYTLREEHDRILTLVNKAKDEQEAYINEVSASLHYKMEE------ME 229
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ +I+ K YSIY+ +L +EV + RII+ P CY
Sbjct: 230 LPCQIKGRFKSFYSIYQKMLSQGLEFDEVYDLIAFRIILDTVPQ------------CYAA 277
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
+G VH +W PI +KDYI PKPN YQS+HTT+I E R+E+QIRT EMD +AE
Sbjct: 278 MGAVHSMWKPIYYKIKDYIGNPKPNMYQSIHTTVIGPKGE---RVEIQIRTHEMDRVAES 334
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+S + G + N + +W+ + E QE
Sbjct: 335 GIAAHWSYK-----------------EGTRIDENTGEL---FAWIRNLVENQENL---KD 371
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
EF++ + DL ++VFTP GEIK LPK AT VD+AY IHTE+G + A+VNG LV
Sbjct: 372 PDEFLENVRIDLYPGEIYVFTPVGEIKTLPKKATPVDFAYRIHTEVGAQCTGARVNGKLV 431
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
+H L + +EIIT + + WL KT A+ KI ++
Sbjct: 432 PLSHELRTGDTIEIITTKGHNPS------RDWLNFVKTVKAKTKIRAYI 474
>gi|260662208|ref|ZP_05863104.1| GTP pyrophosphokinase [Lactobacillus fermentum 28-3-CHN]
gi|260553591|gb|EEX26483.1| GTP pyrophosphokinase [Lactobacillus fermentum 28-3-CHN]
Length = 744
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 300/534 (56%), Gaps = 52/534 (9%)
Query: 126 SPERLWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
+ E ED++ ++ Y++ + LV RA A AH GQ R+SGEP+IIHP++VA IL E
Sbjct: 4 TKELTHEDVKNMVAKYMNEEHVALVERAYHFAAIAHQGQVRKSGEPYIIHPIQVAGILAE 63
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L++D E++ AG +HD VEDT T + I+E FG T+ IV+G+TK+SK+ K +
Sbjct: 64 LKMDPETVCAGYMHDLVEDTGA-TLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQ--- 119
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
A+ R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A
Sbjct: 120 ----MAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIA 175
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG+ IK ELE+LS Y N + Y ++ + + + A K++ I D L
Sbjct: 176 DRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKMAIAD---L 232
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
DL EI K YS+Y+ ++ +++ + +R+++ +
Sbjct: 233 DLGP-NVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVV------------DSIKD 279
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDL 484
CY VLG +H WTP+P KDYIA PK NGYQSLHTT+I LE+QIRT +M
Sbjct: 280 CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIG---PEGRPLEIQIRTHQMHE 336
Query: 485 IAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFV 544
+AE G+AAH++ + T V A + + LN ++E E
Sbjct: 337 VAEYGVAAHWAYKEGKTNGVDQASQDSKK-------------------LNVVKEILELRS 377
Query: 545 GNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVN 604
+ + EF+ I D+ +V+ FTP+G+ +PKGA +D AY IHTE+GN AKVN
Sbjct: 378 ESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVN 437
Query: 605 GNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
G ++ + + N ++V+I+T S S+ + W++ TR AR+KI +F R
Sbjct: 438 GRIIPLNYEIKNGDIVDILT-----SSSSAGPSRDWMDLVSTRRARNKIRQFFR 486
>gi|420157993|ref|ZP_14664817.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
gi|394755340|gb|EJF38587.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
Length = 725
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 315/542 (58%), Gaps = 67/542 (12%)
Query: 125 DSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
D+ + ++DL + + +L+L+ RA LA +H GQKR SG+P+IIHPV VA IL
Sbjct: 3 DTTSKTYDDLLQAMETSGHDFDLDLIGRAYRLAESSHTGQKRLSGQPYIIHPVSVACILV 62
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
EL +D ES+AAGLLHD VEDT+V ++I ++FG+ + +++G V+KLG++
Sbjct: 63 ELGMDSESVAAGLLHDVVEDTSV-GLDQIRKQFGSDIASLIDG---VTKLGRIPYS---- 114
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S ++ +A+++R+M +AM+E++RVII+KLADRLHNMRTL +M P KQ A E ++V+AP+
Sbjct: 115 SREEQQAENIRKMLIAMSEDIRVIIIKLADRLHNMRTLEYMTPQKQRDKALENMEVYAPI 174
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ IK ELE+LS Y + Y +++ + K+ + +E ++ ++
Sbjct: 175 AHRLGIRAIKEELEDLSLRYLDPIAYQEIENTLELRKKDRDHFIETTKALVYDRVSR--- 231
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
M ++ K + IY+ V S++E+ I +R+I+
Sbjct: 232 ---MIPNVYLQGRVKSIHGIYRKVFMQGRSMDEIYDIYAVRVIV------------DTVN 276
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIR 478
CY+VLG++H ++ P+P KDYI+TPKPN YQSLHTT+ IPF EVQIR
Sbjct: 277 DCYNVLGIIHDMFRPLPNRFKDYISTPKPNMYQSLHTTVIGKEGIPF--------EVQIR 328
Query: 479 TEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIRE 538
T EM AE GIAAH+ + GL GK L N R++W+ + E
Sbjct: 329 TWEMHHTAEYGIAAHWK---YKLGLA-----------GKGDSLEN-----RLAWIRQMLE 369
Query: 539 WQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKM 598
Q+ + + + V I DL+ VFVFTP+GE+ NLP GATV+D+AY IH+ +GN+M
Sbjct: 370 NQK----DSDATDIVRNIKSDLVPEEVFVFTPKGEVINLPMGATVIDFAYAIHSAVGNRM 425
Query: 599 VAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ AKV+ +V + + N E++E++T + ++ + WL+ KT AR+KI ++ +
Sbjct: 426 IGAKVDKRIVPIDYKVKNGEIIEVLT----TKEANHGPSRDWLKIVKTSEARNKIRQWFK 481
Query: 659 EQ 660
+
Sbjct: 482 RE 483
>gi|392426696|ref|YP_006467690.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
gi|391356659|gb|AFM42358.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
Length = 739
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 308/539 (57%), Gaps = 64/539 (11%)
Query: 130 LWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
LW L+ T +P LE+V +A A +AH Q R SGE +I+HP+EVA+IL +LE+D
Sbjct: 6 LWIKLQNT----TPQARLEIVDKAYRFAEKAHRNQLRNSGEDYILHPLEVAQILADLEMD 61
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+IAA LLHD VEDT T IE EFG + +V+G V+KLG++ K S +
Sbjct: 62 EATIAAALLHDVVEDTEY-TIADIEREFGPEIALLVDG---VTKLGRIAYK----SKVEQ 113
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+ ++LR+MFLAM +++RVI++KLADRLHNMRTL + KQ IA ETL++FAPLA LG
Sbjct: 114 QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSVEKQKEIAQETLEIFAPLANRLG 173
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+++IK ELE+LSF Y ++Y + +A +E E + E + K+ L+ +
Sbjct: 174 IFRIKWELEDLSFRYLKPQEYYDLVEGIALKRREREAYINEVIVQMRKR------LNEVE 227
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+ +I K YSIY+ + ++E+ + +R+I++ CY
Sbjct: 228 IYADIAGRPKHFYSIYRKMTTQHKELSEIYDLMAIRVIVE------------TVNDCYGA 275
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMD 483
LG++H +W PIP KDYIA PKPN YQSLHTTLI PF E+QIRT EM
Sbjct: 276 LGIIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLIGEHGEPF--------EIQIRTCEMH 327
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNA--NIALRISWLNAIREWQE 541
+E GIAAH+ + + + P G + A N ++SWL + EWQ
Sbjct: 328 RTSEYGIAAHWK----------YKEASSKEPAGGGGGRSAASVNFEQKLSWLRQLLEWQH 377
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
E + + EF++++ DL VFVFTP+G++ LP + VD+AY +HT++G++ V A
Sbjct: 378 E---SRDAGEFMESLKIDLFADTVFVFTPKGDVVELPADSCPVDFAYRVHTDVGHRCVGA 434
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
K+NG +V LAN +++EI+T SK + WL KT A+++I ++ +++
Sbjct: 435 KLNGRIVPLDTKLANGDIIEILT-----SKQGGAPSRDWLAFVKTSQAKNRIRQWFKKE 488
>gi|375091649|ref|ZP_09737938.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
gi|374563171|gb|EHR34493.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
Length = 719
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 298/520 (57%), Gaps = 59/520 (11%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
+PN +EL+ +A LA E H GQ R SGE +I+HPVEV+ IL LELD E+I AGL+HD +
Sbjct: 15 NPN-IELITKAYNLAKEKHKGQVRNSGEEYIVHPVEVSIILSTLELDDETICAGLMHDVL 73
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT+ T E + +EFG + +V+G TK+ L K K K E + + +R+M LAM
Sbjct: 74 EDTDF-TREEMAQEFGDEITALVDGVTKLKNL-KYKTKEE------TQIESIRKMVLAMA 125
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
++RVII+KLADRLHNMRTL + KQ S A ETL+++ PLA LG+ IK ELE+L
Sbjct: 126 NDIRVIIIKLADRLHNMRTLEYKDRDKQISTANETLEIYVPLAHRLGINSIKWELEDLCL 185
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y + Y V +++ E EK +E+ LM+K+ D+ L + +K + K Y
Sbjct: 186 RYIDPISYYSVAQQIDQKRSEREKIIEK----LMQKLSDE--LKKIDIKFTMTGRPKGIY 239
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY + K SI+ + + +R+I+K CY VLG+VH +W PIP
Sbjct: 240 SIYNKMKKQDTSIDNIFDLIAIRVIVK------------DINQCYAVLGIVHNLWKPIPG 287
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYIA PKPN YQSLHTT+I E EVQIRTEEM AE GIA+H+ +
Sbjct: 288 RFKDYIAMPKPNFYQSLHTTVIG---EKGQIFEVQIRTEEMHKNAEFGIASHWQYK---- 340
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
GK +N+ R++W+ + +W ++ + EF+D DL
Sbjct: 341 -------------EGKKKV---SNLDNRLNWIRQLIDWGKD----TGAYEFMDGFKGDLF 380
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
V+VFTP+G++ +L KGAT +D+AY +H+E+G+K V AKVNG + + L ++V
Sbjct: 381 NDEVYVFTPKGDVIDLKKGATPIDFAYRVHSEVGDKCVGAKVNGKIQPLDYKLKTGDIVT 440
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
++T SK++ + WL++ T A++KI F +++
Sbjct: 441 VLT-----SKNSIGPNLDWLDYVVTSHAKNKIKAFFKKKT 475
>gi|158522068|ref|YP_001529938.1| (p)ppGpp synthetase I SpoT/RelA [Desulfococcus oleovorans Hxd3]
gi|158510894|gb|ABW67861.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfococcus oleovorans Hxd3]
Length = 716
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 304/529 (57%), Gaps = 59/529 (11%)
Query: 133 DLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
D+ T+ +P+ ++V RA + + + H+GQ R SGEP++ HP+EVA IL + LD
Sbjct: 6 DILETLQDHNPDAPTDIVERAYIYSAKVHEGQMRLSGEPYLSHPLEVAGILASMRLDSVC 65
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+AAGLLHD +EDT+ T + I+E FG V IV+G TK+S L S QD +A+
Sbjct: 66 VAAGLLHDVLEDTHA-TEKDIQEMFGDEVLHIVQGLTKISTL-------PYSSDQDRQAE 117
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+R+M LAM +++RVI++KL DRLHNMRTL + KQ IA ETL ++AP+A LG+Y
Sbjct: 118 SIRKMILAMADDLRVILIKLVDRLHNMRTLKYHKDAKQKKIARETLDIYAPIALRLGIYW 177
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK+ELE+++F E+ A + R+ E EK +E + +K+ ++ ++
Sbjct: 178 IKNELEDMAFRVLYPEENAFLASRIRTDDVEREKYIETVRDYIKEKLAEN------GLQG 231
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
E+ K YSI++ + K +NEV I RII+ P CY LG+
Sbjct: 232 EVVGRHKHFYSIFQKMKKQNLDLNEVYDIIAFRIILDTMPQ------------CYEALGI 279
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H +W P+ + KDYIA PKPN YQSLHTT+ E R+E+QIRT+EMD +A+ G+A
Sbjct: 280 IHSMWKPLAKKFKDYIAVPKPNLYQSLHTTVFGPFGE---RVEIQIRTKEMDRVAKSGVA 336
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ G GR GKT +W+ + E QE+ TS E
Sbjct: 337 AHW-------GYKEGKDSTGRD--GKTY-----------AWIQNLVETQED---AETSGE 373
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++ + DL V VFTP G +++L +GAT VD+AY+IHTE+G++ AKVNG +V +
Sbjct: 374 FLENVRLDLFSDEVHVFTPEGAVRSLARGATPVDFAYLIHTEVGHQCTGAKVNGRMVPLS 433
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
HVL+ ++VEIIT +A SA WL KT AR +I ++++ +
Sbjct: 434 HVLSTGDIVEIIT-SAKGRPSA-----DWLNFVKTSKARSRIRQWIKNE 476
>gi|301064997|ref|ZP_07205342.1| GTP diphosphokinase [delta proteobacterium NaphS2]
gi|300440846|gb|EFK05266.1| GTP diphosphokinase [delta proteobacterium NaphS2]
Length = 716
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 297/535 (55%), Gaps = 62/535 (11%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
RL + +SY ++EL+ +A + + + H GQ R SGEP++ HP+E A IL +L++D
Sbjct: 3 RLNDITSQVLSYHPKADIELIEKAYVYSAKVHQGQIRLSGEPYLSHPLEAAYILTQLKMD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
IAAGLLHD VEDT+ + E I FG IV+G TK+SK+ S +
Sbjct: 63 VVCIAAGLLHDVVEDTHA-SLEEISGLFGEETANIVDGVTKISKI-------HFKSSKQR 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A+++R+M LAM+ ++RVI+VKLADRLHNMRTL P KQ SIATETL ++APLA +G
Sbjct: 115 QAENVRKMILAMSTDIRVILVKLADRLHNMRTLGFQPEKKQRSIATETLDIYAPLAGRMG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDL 366
++ IKS LE+L Y + YA +K L + E+ + MK+++D L
Sbjct: 175 IHWIKSNLEDLCLFYLEPKIYASIK----SLTARRQSEMGD----FMKRVQDILTDELGK 226
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+ + I+ K YSIYK ++ + +V I R+I+ S + CY
Sbjct: 227 VNIAATIKGRQKHFYSIYKKMIAQDLEVGQVFDILAFRVIV------------SSIKECY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
LG +H IW P+ + KDYI+ PK N YQSLHTT+ + E R+EVQIRT EM +A
Sbjct: 275 EALGHIHSIWKPVSKRFKDYISVPKANMYQSLHTTVFGPMKE---RMEVQIRTWEMHHVA 331
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + G+ V + R +WL + +WQ+
Sbjct: 332 ESGIAAHW-----------------KYKEGRAVQKADEK---RFAWLKELLDWQKNL--- 368
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
+EF++T+ DL V+VFTP GE+K+ PKGAT++D+AY IH+E+G K AKV+G
Sbjct: 369 DDPQEFLETVKMDLFPDEVYVFTPTGEVKSFPKGATMIDFAYSIHSEVGEKCSGAKVDGR 428
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+V L N +VE+IT S K K WL KT AR KI ++++ Q
Sbjct: 429 MVPLRAELKNGNIVEVIT----SPKQ--HPSKDWLTFVKTSRARTKIRQWIKTQG 477
>gi|227544928|ref|ZP_03974977.1| GTP diphosphokinase [Lactobacillus reuteri CF48-3A]
gi|338204327|ref|YP_004650472.1| GTP diphosphokinase [Lactobacillus reuteri SD2112]
gi|125625359|gb|ABI26419.2| RelA [Lactobacillus reuteri]
gi|227185095|gb|EEI65166.1| GTP diphosphokinase [Lactobacillus reuteri CF48-3A]
gi|336449567|gb|AEI58182.1| GTP diphosphokinase [Lactobacillus reuteri SD2112]
Length = 745
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 301/528 (57%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV +A A AH Q+R+SGEP+IIHP++VA IL L +D E
Sbjct: 10 EDVQKIVSSYMNEEHVALVEKAYHFAEVAHHDQRRKSGEPYIIHPIQVAGILANLHMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG LHD VEDT T + I+E FG+T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVCAGYLHDIVEDTGA-TLDDIKELFGSTIAMIVDGDTK---LGKIRYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++E+ K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYIDESIKLIKKAIAD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVV------------DSIRDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT +M IAE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTIIG---PEGRPLEVQIRTHKMHEIAEYGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTNGIQQTQDSQKLNVVKEILELRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKG+ +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W + TR AR+KI +F R
Sbjct: 443 DYEIKNGDIVDILT-----SSSSAGPSRDWFDLVSTRRARNKIRQFFR 485
>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
Length = 729
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSKSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KIE++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIENE--MTNMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
Length = 729
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KIE++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIENE--MTNMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|312868044|ref|ZP_07728248.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
gi|311096448|gb|EFQ54688.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
Length = 739
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|302335523|ref|YP_003800730.1| (p)ppGpp synthetase I SpoT/RelA [Olsenella uli DSM 7084]
gi|301319363|gb|ADK67850.1| (p)ppGpp synthetase I, SpoT/RelA [Olsenella uli DSM 7084]
Length = 781
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 310/530 (58%), Gaps = 52/530 (9%)
Query: 131 WEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG-ELELD 188
W LR T ++YL L + A A + H Q+RRSGEP+I HPVEVA IL +L++D
Sbjct: 22 WRVLRNTCVTYLDAEALAKIDAAYSFAADFHRDQRRRSGEPYINHPVEVALILAKDLKMD 81
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+ I A LLHDTVEDT+ T + + E FGATV +V+G TK++ + E S+ +
Sbjct: 82 EDPICAALLHDTVEDTSA-TLDDLTERFGATVAELVDGVTKLTSI-------EVSSMDEK 133
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A +LR+MFLAM++++RV+I+KLADRLHNMRTL+ +PP ++ A ET+ V+APLA LG
Sbjct: 134 QALNLRKMFLAMSKDIRVVIIKLADRLHNMRTLAALPPDRRVFKARETMDVYAPLADRLG 193
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK ELE+L+F Y N ++Y ++ R V + + E+ +EA K L D+ +
Sbjct: 194 ISSIKWELEDLAFFYLNPDEYERIARMVQESRAQREQNTDEAIKTL-----GDELARVGI 248
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
+I K +SIY+ + + ++ + +R++ + VG CY
Sbjct: 249 TGFQIHGRPKHLWSIYQKMTRKGKKFTDIYDLIAIRVLTE-----SVGD-------CYST 296
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG VH +W P+P KDYIA PKPNGYQSLHTT+I F +E+QIRT EM AE
Sbjct: 297 LGAVHTVWHPLPGRFKDYIAMPKPNGYQSLHTTVIGF---DARPIEIQIRTFEMHSQAEY 353
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREW-QEEFVGNM 547
GIAAH+ + +GR R + A++ +I+W+ +W +E +G+
Sbjct: 354 GIAAHWLYK-------KSGNSSGRMSR------DEADVDSQINWIRRSLDWATDEEMGD- 399
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
E+++++ +L +FVFTP+GE+ +L + +T +D+AY +HTE+GN V AKVNG++
Sbjct: 400 -PHEYLNSLRVELFEDEIFVFTPKGEVMSLRRDSTPLDFAYAVHTEVGNHCVGAKVNGSV 458
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
T+ L + + +EI+T +K+A H WL T SA+ KI K+
Sbjct: 459 APLTYRLQSGDRIEILT-----NKNARPSH-DWLNVVVTPSAKAKIRKYF 502
>gi|339010669|ref|ZP_08643239.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|421875402|ref|ZP_16306994.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
gi|338772824|gb|EGP32357.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|372455610|emb|CCF16543.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
Length = 727
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 198/522 (37%), Positives = 307/522 (58%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+S ++ ++ RA LA +AH+GQ R+SG P+I+HP+ VA IL ++ +D ++AAG LH
Sbjct: 14 SYMSSEDVTMLERAYDLARKAHEGQVRKSGVPYIMHPIAVAGILTDMHMDAVTVAAGFLH 73
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + + +EFG+ V +V+G TK+ K+ K K K E A++ R+M +
Sbjct: 74 DVVEDTDI-TLDDLRKEFGSEVAHLVDGVTKLEKI-KYKSKEEQ------LAENHRKMLV 125
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL HM KQ I+ ETL++FAPLA LG+ +K ELE+
Sbjct: 126 AMAQDIRVILIKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIAFVKWELED 185
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E+ + EA ++ K+ + + ++ EI K
Sbjct: 186 TALRYLNPQQYYRIVNLMQKKRTEREEYISEAKAMITDKLHE------LHIEAEIAGRPK 239
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK ++ NE+ + LRII+ + + CY VLG+VH +W P
Sbjct: 240 HIYSIYKKMVSQNKQFNEIYDLLALRIIV------------NDIRDCYAVLGIVHTLWKP 287
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I E LEVQIRT +M AE GIAAH++ +
Sbjct: 288 MPGRFKDYIAMPKANMYQSLHTTVIGPKGEP---LEVQIRTWDMHRTAEIGIAAHWAYK- 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G+ + +I L I + +E N ++EF++++ +
Sbjct: 344 --------------EGKGEV----QGSFEEKIGNLREIIQGGQEETPN--AQEFMESLKQ 383
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL VFVFTP+G++ LPKG+ +D+AY IH+ +GN+ + AKVNG +V L +
Sbjct: 384 DLFSDTVFVFTPKGDVVELPKGSVPLDFAYRIHSAVGNRTIGAKVNGKIVPLDFALRTGD 443
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++EI+T SK ++ + WL+ AK+ AR+KI ++ +++
Sbjct: 444 IMEILT-----SKHSYGPSQDWLKIAKSAHARNKIKQWFKKE 480
>gi|322390790|ref|ZP_08064300.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
gi|321142460|gb|EFX37928.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
Length = 739
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|251772536|gb|EES53102.1| GTP pyrophosphokinase [Leptospirillum ferrodiazotrophum]
Length = 745
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 318/539 (58%), Gaps = 57/539 (10%)
Query: 132 EDLRPTISYLSPN--ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
E L +S +PN L+L+R+A LA ++H+GQ+R+SGE +I HP+ VA IL ++++D
Sbjct: 26 ESLIEAVSSYNPNPEALDLLRKAYSLALKSHEGQRRQSGESYIHHPLSVAMILADMKVDT 85
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+S+ LLHDT+EDT++ T E IE FG V ++++G TK+ K K + E +
Sbjct: 86 QSLVTALLHDTLEDTSL-TPEEIESTFGKKVLQLIDGVTKIGKFHFKKSRAEK------Q 138
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++ R+M L+M E++RV++VKLADRLHNMRT+ + P KQ SIA ETL ++APLA LG+
Sbjct: 139 AENFRKMLLSMAEDIRVLLVKLADRLHNMRTIEWLDPAKQRSIAQETLDIYAPLANRLGI 198
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
IK ELE+LSF + E ++ ++ RVA +E + +++ + + + ++++ V
Sbjct: 199 GWIKLELEDLSFRALDPETFSDLRARVAKKRRESKNYIDQIVRSVTRVLQEN------GV 252
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
+ K YSIY+ + +E+ + +R+I K CY +L
Sbjct: 253 PGRVIGRYKHIYSIYRKMTMQEIPFDEIYDLMGIRVITDSKLH------------CYGIL 300
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
GL+HG++ P+ +KD+IA PK N YQSLHTT+I E + +E QIRTEEM +AE G
Sbjct: 301 GLLHGMYKPMTGRIKDFIAVPKSNMYQSLHTTVIG--PEGVL-IEFQIRTEEMHRVAEEG 357
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
+AAH++ + G +P L++ I ++WL + EWQ+E N
Sbjct: 358 VAAHWNYKENADG----------AP-----ALSDLQI---VTWLRQLVEWQKELSDN--- 396
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++++ +L V+VFTP+G+++ + KGAT +D+AY IHTE+G++ V A+VNG V
Sbjct: 397 HEFMNSVKLNLFPDEVYVFTPKGDVREMIKGATAIDFAYAIHTEVGHRTVGARVNGRWVP 456
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
VL + +VVEIIT N + S K WL T AR +I +++E+ A+EI
Sbjct: 457 IKTVLESGDVVEIIT-NPSQTPS-----KDWLRFVATPKARARIRHWIKEEETRQAAEI 509
>gi|87121090|ref|ZP_01076981.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinomonas sp. MED121]
gi|86163582|gb|EAQ64856.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Marinomonas sp. MED121]
Length = 703
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 307/538 (57%), Gaps = 58/538 (10%)
Query: 132 EDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
EDL T I YLS ++ ++RA A +AHDGQ+R+SGEP++IHP+ VA+IL E +D +
Sbjct: 5 EDLASTLIQYLSYEQVADIKRAYYYAEQAHDGQRRKSGEPYVIHPLAVAQILAEFRMDCD 64
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+ A LLHD +EDT + + E + E+FG V +V+G VSKL L+ N+ + +A
Sbjct: 65 GLVAALLHDVIEDTGI-SREALTEQFGEGVAALVDG---VSKLTHLEFNNQ----LEKQA 116
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+ ++M +AM +++RVI+VKLADRLHNMRTL MP HK+ IA ETL ++AP+A LGMY
Sbjct: 117 HNFQKMAMAMADDIRVILVKLADRLHNMRTLDSMPAHKKRRIARETLDIYAPIANRLGMY 176
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
++ LE+L+F + R + Y + K+ E+ L ++ D ++
Sbjct: 177 NVRINLESLAFQAYYPMRARMLNRAINKKYGQRIKDTEKLGDYLKSELAAD------YIE 230
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
++I K YSIY+ + K R S+ E+ + +RII CY +LG
Sbjct: 231 SDISIREKHIYSIYQKMQKKRRSLGEIMDVVGVRII------------TDKHDSCYRILG 278
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
++H ++ P+ KDYIA PK NGYQSLHTT++ + +EVQIRT+EM+++A+ GI
Sbjct: 279 VIHSLFKPVEGRFKDYIAVPKSNGYQSLHTTVVG---TNGLPMEVQIRTQEMNMVADNGI 335
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + T G + + R+ + W+ ++ E Q++ GN
Sbjct: 336 AAHWA---YKTTSAGASNSHDRATK----------------WVKSLLEIQQK-AGNAI-- 373
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EFVD + DL V+VFTP GEI LP GAT VD+AY +HTEIGN ++ ++N L
Sbjct: 374 EFVDNVKNDLFPDEVYVFTPNGEIIELPTGATPVDFAYGVHTEIGNTCISCRINRRLSPL 433
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
+ L + + VEIIT +K A Q + WL A T AR I +L+++ +A I
Sbjct: 434 STQLESGQTVEIIT-----AKKA-QPNVAWLSFAITGKARANIRHYLKDKQRENAISI 485
>gi|423332782|ref|ZP_17310564.1| GTP pyrophosphokinase [Lactobacillus reuteri ATCC 53608]
gi|337727900|emb|CCC02989.1| GTP pyrophosphokinase [Lactobacillus reuteri ATCC 53608]
Length = 745
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 300/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV +A A AH Q+R+SGEP+IIHP++VA IL L +D E
Sbjct: 10 EDVKKIVSSYMNEEHVALVEKAYHFAEVAHHDQRRKSGEPYIIHPIQVAGILANLHMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVCAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIRYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++E+ K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYIDESIKLIKKAIAD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRSKHIYSVYRKMVTQHKQFSQIYDLLAVRIVV------------DSIRDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT +M IAE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTIIG---PEGRPLEVQIRTHKMHEIAEYGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTNGIQQTQDSQKLNVVKEILELRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKG+ +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIYTDKVYAFTPKGDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W + TR AR+KI +F R
Sbjct: 443 DYEIKNGDIVDILT-----SSSSAGPSRDWFDLVSTRRARNKIRQFFR 485
>gi|357012698|ref|ZP_09077697.1| RelA [Paenibacillus elgii B69]
Length = 731
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 201/534 (37%), Positives = 304/534 (56%), Gaps = 60/534 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+ N+L+ +R A A +AH GQ R+SGEP+I+HP+ VA IL +++D SI A LLH
Sbjct: 12 TYVKENDLKRIREAYEFADQAHYGQVRKSGEPYILHPLAVADILVNMQMDTTSIIAALLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V + E + E+FGAT IV+G TK+ K+ K K K E+ + ++ R+MF+
Sbjct: 72 DVVEDTTV-SLETVHEKFGATCAMIVDGLTKLEKI-KFKSKEEHQN------ENYRKMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H Q IA ETL++F P+A LG+ IK E+E+
Sbjct: 124 AMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIFCPIAHRLGISAIKWEMED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++ Y N + Y ++ + E E+ L + + +K+++ M + +I K
Sbjct: 184 IALRYLNPQQYYRIVNLMQKKRAEREQYLSDVIASVGEKLQE------MGIDGDISGRPK 237
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + NE+ + LRII+ + CY LG++H +W P
Sbjct: 238 HIYSIYKKMTVKSKQFNEIYDLLALRIIV------------DNIKDCYATLGIIHTLWKP 285
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I E LEVQIRT EM +E G+AAH++ +
Sbjct: 286 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRTSEYGVAAHWAYK- 341
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G + P+G + ++ ++ I E Q + ++EFV+++
Sbjct: 342 -----EGTSVPSG-------------SYEDKMHFIREILELQND---TQDAQEFVESLKM 380
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D VFVFTP+GE+ LP G+ +D+AY IHTE+GN+ + AKVNG +V H L +
Sbjct: 381 DFFSDLVFVFTPKGEVIELPAGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHKLKTGD 440
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEI 668
++EI+T SK ++ + W++ A++ AR KI ++ RE+ L E+
Sbjct: 441 IIEILT-----SKHSYGPSQDWVKIAQSSHARTKIRQWFKKERREENVLKGREM 489
>gi|334136491|ref|ZP_08509954.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
gi|333605960|gb|EGL17311.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
Length = 728
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 301/527 (57%), Gaps = 56/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L Y EL ++ A A +AH GQ R+SGEP+I+HP+ VA IL ++++D SI
Sbjct: 7 LEKAAQYFKETELNRIKEAYEFAEQAHHGQVRKSGEPYILHPLAVADILVDMQMDVTSII 66
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
A LLHD VEDT V + E ++++FG T +V+G TK+ ++ K K K E + ++
Sbjct: 67 AALLHDVVEDTTV-SLEAVQDKFGRTCAMLVDGLTKLERI-KFKTKEEQQN------ENY 118
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+MF+AM +++RVI++KLADRLHNMRTL + Q IA ETL++F P+A LG+ IK
Sbjct: 119 RKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIK 178
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
E+E+++ Y N + Y R+ +L ++ E E+ + +++ I+D L M ++ +I
Sbjct: 179 WEMEDIALRYLNPQQYY----RIVNLMQKKRTEREKYIEDVIRNIQDK--LREMGIEGDI 232
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSI+K + NE+ + LR+I+ + CY LG++H
Sbjct: 233 SGRPKHIYSIHKKMSSRNKQFNEIYDLMALRVIV------------DNIKDCYAALGIIH 280
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA PKPN YQSLHTT+I E LEVQIRT EM AE GIAAH
Sbjct: 281 TLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTWEMHKTAEYGIAAH 337
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + NG SP G + ++ W I E Q+E + EF+
Sbjct: 338 WA----------YKEGNG-SPEG--------TFSDKMQWFREILELQKE---TDNASEFM 375
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+++ D VFVFTP+GE+ LP GA +D+AY IHTE+GN+ + AK+NG +V H
Sbjct: 376 ESMKMDFFTDLVFVFTPKGEVIELPAGAVPLDFAYRIHTEVGNRTIGAKINGRIVPLDHK 435
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L ++VEI+T SK ++ + W++ A++ AR KI ++ +++
Sbjct: 436 LKTGDIVEILT-----SKHSYGPSQDWVKIAQSSHARSKIKQWFKKE 477
>gi|242373934|ref|ZP_04819508.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
gi|242348358|gb|EES39960.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
Length = 734
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 296/510 (58%), Gaps = 54/510 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 16 EVLHKAKSYLSASEYEYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 75
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++ F V RIV+G TK+ K+ K + K E +A+
Sbjct: 76 IVAGFLHDVIEDTPY-TFEDVKSMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 127
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 128 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 187
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y ++ Y R+ +L K+ E E + KIE + +D M +
Sbjct: 188 IKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYIANAISKIEAE--MDKMKLSG 241
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 242 EISGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 289
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+A
Sbjct: 290 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVA 346
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GKTV + +++WL +E E ++E
Sbjct: 347 AHWAYK-----------------EGKTVNEKTQDFQNKLNWL---KELAETDHTTTDAQE 386
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 387 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 446
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWL 641
+VL +++EI T SK ++ + WL
Sbjct: 447 YVLQTGDIIEIRT-----SKHSYGPSRDWL 471
>gi|336395470|ref|ZP_08576869.1| GTP pyrophosphokinase [Lactobacillus farciminis KCTC 3681]
Length = 743
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 297/533 (55%), Gaps = 58/533 (10%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+PE++ + R Y++ +E V +A A H QKR +GEP+IIHP +VA+IL L
Sbjct: 9 TPEQVLDICR---GYMNDEHVEFVNKAYNFAAYVHKEQKRATGEPYIIHPTQVAQILASL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
+D ++AAG LHD VEDTNV T ++E FG V IV+G TK+SK + HS
Sbjct: 66 HMDPYTVAAGYLHDVVEDTNV-TLGDVKELFGDQVATIVDGVTKISKY-------KYHSH 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
Q++ A++ R+M LA +++RVI+VKLADRLHNMRTL + P KQ IA ETL+++APLA
Sbjct: 118 QELLAENHRKMLLATAKDLRVIMVKLADRLHNMRTLKALRPDKQRRIANETLEIYAPLAD 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+ +IK ELE+LS Y N + Y ++ + + E + EA + K + D
Sbjct: 178 RLGISKIKWELEDLSLHYINPQQYYRIVHLMNSKRDQREAYIAEAIDYIKKNV------D 231
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
+ +K +I K YSIYK + +E+ + +RI++ + C
Sbjct: 232 ALGIKYDIYGRPKHIYSIYKKMRDKHKQFSELYDLLAIRIVV------------DSVKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG +H W PIP KDYIA PK NGYQSLHTT+I LEVQIRT EM +
Sbjct: 280 YAVLGSIHSKWKPIPGRFKDYIAVPKANGYQSLHTTIIG---PGGQPLEVQIRTFEMHQV 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE G+AAH++ + G ++ + +I I E QE
Sbjct: 337 AEYGVAAHWAYK-----------------EGNFEGVHLDDNEQKIDVFREILELQE---N 376
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ + +F+ ++ ++ RV+VFTP+GE+ LPKGA +D+AY +HTE+GN + AK+NG
Sbjct: 377 SDNASDFMKSVKGEIFNDRVYVFTPQGEVIELPKGAVTLDFAYQVHTEVGNHSIGAKING 436
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+V + L N ++VE++T S+ Q + W+ T AR+KI ++ R
Sbjct: 437 RMVPLNYQLKNGDIVEMLT------NSSSQPSRDWVNVVFTSRARNKIKRYFR 483
>gi|416125363|ref|ZP_11595961.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
gi|319400960|gb|EFV89179.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
Length = 729
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 297/503 (59%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M++ EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSERESYITNAINKIKNE--MTKMSLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|194467765|ref|ZP_03073751.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri 100-23]
gi|194452618|gb|EDX41516.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri 100-23]
Length = 745
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 300/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV +A A AH Q+R+SGEP+IIHP++VA IL L +D E
Sbjct: 10 EDVQKIVSSYMNEEHVALVEKAYHFAEVAHHDQRRKSGEPYIIHPIQVAGILANLHMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVCAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIRYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++E+ K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYIDESIKLIKKAIAD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVV------------DSIRDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT +M IAE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTIIG---PEGRPLEVQIRTHKMHEIAEYGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTNGIQQTQDSQKLNVVKEILELRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKG+ +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFADKVYAFTPKGDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W + TR AR+KI +F R
Sbjct: 443 DYEIKNGDIVDILT-----SSSSAGPSRDWFDLVSTRRARNKIRQFFR 485
>gi|329769877|ref|ZP_08261276.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
gi|328837931|gb|EGF87555.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
Length = 725
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 306/522 (58%), Gaps = 55/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL ++++++ + LA +AH+GQ R+SGEP+I+HP++VA IL EL+LD+ +I AG LHD
Sbjct: 19 YLPEEQIKIIKESYELAKDAHEGQFRKSGEPYILHPIQVAGILTELKLDYATICAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT T E I E FG + IV+G V+KL K+K +++ S +A++ R++F++
Sbjct: 79 VVEDTKY-TLEDIRERFGDDIAVIVDG---VTKLDKVKFRSKKQS----QAENHRKLFVS 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
+ +++RVI VKLADRLHNMRT+ +M KQ IA+ETL+++APLA LG+ +K ELE+
Sbjct: 131 IAKDLRVIFVKLADRLHNMRTMKYMREEKQREIASETLEIYAPLAHRLGISSVKWELEDT 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y + Y + + E+ ++EA + + L +K ++ K
Sbjct: 191 SLRYLHPAQYFSIVGMMKQKRSAREESIKEACESIT------SLLGEHNIKAQVNGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++K + +++ + +R+++ V CY LGLV+ +W PI
Sbjct: 245 IYSIYKKMVKQNKTFDQIYDLLAVRVLV-----DSVAD-------CYATLGLVNNLWVPI 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P +KDYIA PKPN YQSLHTT+I ++ LEVQIRT EM IAE+GIAAH++ +
Sbjct: 293 PGRIKDYIAMPKPNMYQSLHTTVIAPDGQT---LEVQIRTYEMHEIAEKGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK V +N N +++W I E E T+ F++++ D
Sbjct: 348 ---------------EGKKVNKDN-NFYEKLNWFQKIAENDE---TEATAESFMESLKVD 388
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
LL +++VFTP +I LPKG+ +VD+AY IH+E+GNKM+ A VN + + + L+ E+
Sbjct: 389 LLSDKIYVFTPNSDIIELPKGSCIVDFAYAIHSEVGNKMIGATVNDKIEAFDYKLSTGEI 448
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+I T SK++ + WL+ A++ + KI F ++ A
Sbjct: 449 CDIRT-----SKNSTGPKRSWLDIARSSQTKSKIKAFFKKAA 485
>gi|420198789|ref|ZP_14704475.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
gi|394272970|gb|EJE17413.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
Length = 729
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 297/503 (59%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M++ EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSERESYITNAINKIKNE--MTKMSLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|419799077|ref|ZP_14324447.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
gi|385698804|gb|EIG29147.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
Length = 739
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|188996556|ref|YP_001930807.1| (p)ppGpp synthetase I SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931623|gb|ACD66253.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
Length = 713
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 303/536 (56%), Gaps = 67/536 (12%)
Query: 125 DSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE 184
D+P + +L I YL P E + + A+ E H Q R+SGEP+ IHP+E A+ + +
Sbjct: 5 DAPAK---ELLNKIDYLKPEEKQEIENAIDYVIEKHKDQYRKSGEPYYIHPIEAAKTIAD 61
Query: 185 LELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS 244
L+LD SI + LLHD VEDT+ T E IEE+FG V IV+G V+K+GK + +N
Sbjct: 62 LKLDKTSIISTLLHDIVEDTDT-TLEEIEEKFGKKVAEIVDG---VTKIGKYQFEN---- 113
Query: 245 VQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLA 304
++D K ++ R++ ++ +++RVI+VKLADRLHNM+TL H+ KQ IA ETL+++AP+A
Sbjct: 114 LEDAKYENFRKLIISTAKDIRVILVKLADRLHNMKTLQHLREDKQKRIAKETLEIYAPIA 173
Query: 305 KLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFL 364
LG++ IK ELE+L+FMY E+Y KV A +++EK L E ++K L
Sbjct: 174 SRLGLWNIKRELEDLAFMYLYPEEYKKVATYFAHSKEKYEKYLTEKVIPVLK-----DAL 228
Query: 365 DLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQI 424
+K EI+ K YSIY+ L+ +++V + +R+ L +
Sbjct: 229 KQHGIKAEIQYRYKHLYSIYEKTLRKNLKLSDVYDVFGVRV------------LVEDVKD 276
Query: 425 CYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMD 483
CY LG+VH IWTP+P KDYI+ PK N YQ+LHTT + P E F +E+QI+T +M
Sbjct: 277 CYLALGVVHSIWTPVPGKFKDYISLPKSNFYQALHTTAVGP---EGRF-VEIQIKTFQMH 332
Query: 484 LIAERGIAAH--YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
IAE GIAAH Y G GK + +A + WL + E +
Sbjct: 333 KIAEEGIAAHWIYKG-------------------GKDLTEKDAQTFV---WLKNLLETLK 370
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
E +S E ++ I+ DL+ ++VFTP+G++ LP G+T VD+AY IHT++G+K V A
Sbjct: 371 E----NSSSEIINDISNDLILDEIYVFTPKGDLIKLPSGSTPVDFAYAIHTKVGHKAVGA 426
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
KVNG LV L + +VVEIIT K + WL T A+ I +++
Sbjct: 427 KVNGKLVPLDTKLKSGDVVEIIT------KEGHNPSRDWLNFVVTSKAKTNIKQYI 476
>gi|337283189|ref|YP_004622660.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
gi|335370782|gb|AEH56732.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
Length = 739
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHSGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|402310465|ref|ZP_10829429.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
gi|400368388|gb|EJP21399.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
Length = 739
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 309/534 (57%), Gaps = 62/534 (11%)
Query: 132 EDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
E+L + +P ++ ++ +A A H+GQ RRSGE +IIHPVEVA IL ELELD
Sbjct: 3 ENLIQKVKTYNPEADVSIIEKAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVA 62
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
SIAAGL+HD VEDT V T ++++ FG + ++V+G TK+ K+ K K EN +A
Sbjct: 63 SIAAGLMHDVVEDTEV-TSDQMKSMFGEEIAKLVDGVTKLGKIA-YKTKEEN------QA 114
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MF+AM +++RV+++KLADRLHNMRTL MPP+K + ETL++FAP+A+ LGM+
Sbjct: 115 ENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMF 174
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA----NKILMKKIEDDQFLDL 366
+IK E+E+++ YT + Y ++R++ + E + + + L K+I ++ F
Sbjct: 175 KIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHF--- 231
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
EI K YSIYK + + E+ +R+I++ K CY
Sbjct: 232 -----EIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE------------CY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIA 486
VLG+VH +W PIP KDYI PK N YQSLHTT+ E +E+QIRTEEM A
Sbjct: 275 WVLGIVHSMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGEL---VEIQIRTEEMHKTA 331
Query: 487 ERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGN 546
E GIAAH+ + GR + + + + +++WL + +WQ+E
Sbjct: 332 EYGIAAHWKYK------------QGR------IDPHESEMDKKLAWLRQLMDWQKEVTD- 372
Query: 547 MTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN 606
E++ ++ DL +VFVFTP+G+I LP G+T +D AY IHT +GNK V AK+N
Sbjct: 373 --PDEYMKSLKTDLYSHQVFVFTPKGDIIELPAGSTPIDMAYKIHTNVGNKCVGAKINNK 430
Query: 607 LVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V+ L N ++VEI+T + +SK + WL ++ + KI ++ +++
Sbjct: 431 IVTLDTELKNGQIVEIMT--SANSKGP---SRDWLNIVQSSHTKSKIKQWFKKE 479
>gi|269792823|ref|YP_003317727.1| (p)ppGpp synthetase I SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100458|gb|ACZ19445.1| (p)ppGpp synthetase I, SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 756
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 302/520 (58%), Gaps = 59/520 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL +L + AL+ A AH Q+R SGEP+I+H + VA IL ++ LD E+++A LLHD
Sbjct: 50 YLDRQDLMKLGEALVFAANAHREQRRHSGEPYIVHSISVAAILADMGLDVETLSAALLHD 109
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT V E + FG V +V+G V+KLGKL K S++D +A++LR+MFL
Sbjct: 110 VLEDTEVGK-EEMLSRFGEGVLTMVDG---VTKLGKLAFK----SMEDYQAENLRKMFLV 161
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RV+++KLADRLHNMRTL KQ +IA ETL+++APLA LG+Y +K ELE+L
Sbjct: 162 MAKDIRVVLIKLADRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDL 221
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
F + Y +++RRV E E +++A +L K++++ ++ + K
Sbjct: 222 CFKILEPDIYYEIRRRVRKKLPEREAIIKQALDVLQGKLKEE------GIEAYLSGRPKH 275
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY+ + + S++++ + LR+I VG + CY VLGLVH IW PI
Sbjct: 276 FYSIYEKMRRKNLSLDQLYDLLALRVI--------VGTVAE----CYQVLGLVHTIWKPI 323
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P DYIA PK N YQSLHTT+ L S LEVQIRT EM +AE G+AAH+
Sbjct: 324 PGQFDDYIANPKSNMYQSLHTTV---LGPSGEPLEVQIRTWEMHWLAEYGVAAHW----- 375
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
H + R I ++SW+ + E Q+E + EF+D++ D
Sbjct: 376 ------HYKEGKR---------RVDQIDQKLSWIRQVLETQQEG----SPAEFLDSLKTD 416
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+L S V VFTP+G++ +LP G+T +D+AY IHTE+G+K V A VNG +V H L+N ++
Sbjct: 417 VLTSEVLVFTPKGDVVSLPNGSTPIDFAYAIHTEVGHKCVGAMVNGRIVPMDHKLSNGDI 476
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
V ++T + + WL+ A++ R+KI + R+
Sbjct: 477 VRVLT------SPQGKPSRDWLKIARSSRTRNKIKAYFRQ 510
>gi|302038556|ref|YP_003798878.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
gi|300606620|emb|CBK42953.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
Length = 727
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 306/530 (57%), Gaps = 58/530 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +L+LVRRA + +AH+GQ RRSGEP+ HP+ VA +L L+ D +I AGLLH
Sbjct: 18 SYNVEADLDLVRRAYDFSAKAHEGQMRRSGEPYFRHPLAVAGLLTHLKTDVTAIVAGLLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
DT+EDT E +E+ FG V +V+G V+K+GK+ +N ++ +A++ R+M L
Sbjct: 78 DTLEDTLATPLE-LEQRFGKDVVHLVDG---VTKIGKITFRN----YEEKQAENFRKMVL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
+M +++RV+++KLADRLHNMRTL ++ K+ IA ETL+++APLA LG+ IK+ELE+
Sbjct: 130 SMADDIRVVLIKLADRLHNMRTLEYLSEGKRQQIAQETLEIYAPLANRLGIGWIKNELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L + + Y ++ RVA ++ ++ + E ++ K + + ++ E+ K
Sbjct: 190 LCLKHLKPDVYESLRVRVAKRDEDRQQYIIEVIDLVKKAMAE------AGLQGEVSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
Y IY+ + K S EV +A LRII K CY +LG++H +W P
Sbjct: 244 HLYGIYQKMEKQSISFEEVYDLAALRIITDIK------------MNCYALLGVIHSLWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ E +E QIRTEEM ++E+GIAAH+ +
Sbjct: 292 LPGRFKDYIAIPKSNMYQSLHTTVVGPQGE---HVEFQIRTEEMHRVSEQGIAAHWKYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
H R + + GK SWL EW ++ N R+F+D++
Sbjct: 348 ------EHGRIDEKD--GKV-----------FSWLRQFVEWNQDLPDN---RQFMDSVKL 385
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G +K LPKG+T VD+AY +HTEIG+ V AKVNG +V H++ + +
Sbjct: 386 DLFHDVVYVFTPQGMVKELPKGSTPVDFAYSVHTEIGDHCVGAKVNGKIVPLKHMMESGD 445
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEI 668
+VEI+T + H+ WL+ +T A+ KI +++ + + EI
Sbjct: 446 MVEILTAANQTP------HRDWLKFVRTSRAKTKIKHWIKAEEQARSIEI 489
>gi|414156756|ref|ZP_11413057.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
F0442]
gi|410869749|gb|EKS17709.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus sp.
F0442]
Length = 739
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 308/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHSGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDTN + + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTNA-SLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTIVKTSKARNKIRQFFKNQ 484
>gi|417647325|ref|ZP_12297167.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
gi|329724679|gb|EGG61185.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
Length = 729
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYYIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|406874357|gb|EKD24330.1| hypothetical protein ACD_81C00051G0002 [uncultured bacterium]
Length = 584
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 312/533 (58%), Gaps = 61/533 (11%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
LS E+EL+++A + + +AH+ QKR SGEP+ H + A L +LD +IAAGLLHDT
Sbjct: 19 LSDAEVELLKKAYLTSQKAHENQKRNSGEPYFNHVFQTALTLASWDLDTATIAAGLLHDT 78
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNE---NHSVQDVKADDLRQMF 257
VEDT+ E ++++FG + +V G V+KLG LK + H + A++LR+M
Sbjct: 79 VEDTSY-KLETLQKDFGEEIAFLVNG---VTKLGHLKYRTSVKTEHERMEHLAENLRKMI 134
Query: 258 LAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELE 317
LA++E++RV+ VKLADRLHNM TL +P KQ IA ETL+++APLA LGM + ELE
Sbjct: 135 LAISEDLRVVFVKLADRLHNMTTLGSVPSLKQKRIALETLEIYAPLAYRLGMQNLSGELE 194
Query: 318 NLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
+L+FMY + E+Y +K+ V++ Y+E + LE +L ++ ++ +K + R+
Sbjct: 195 DLTFMYLHPEEYEWMKKNVSEQYEERVQYLERVEPLLRTALKK---ANIEPIKIDYRA-- 249
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K S+YK +L+S ++ ++ LR+I+ + + CY LG+VH +W
Sbjct: 250 KRLSSLYKKLLRSDMNLEQIYDFVALRVIV------------NTVEECYSALGMVHQLWP 297
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY--- 494
P+P +KDYIA PKPNGY+SLHTT+ E E+QIRT +M AE GIAAH+
Sbjct: 298 PMPGRIKDYIALPKPNGYKSLHTTV---FCEDKRVTEIQIRTLQMHEEAENGIAAHWAYS 354
Query: 495 ---SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
+ + F+ G K+ + A+ ++W+N +R WQ++F G E
Sbjct: 355 QAKTSKEFIAG-------------DKSFSVKQAD----LNWVNQLRNWQKDFTG---PDE 394
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
FV ++ D RVF TP+GE+ +LP G+T +D+AY IH+EIG+ V AKVN +V
Sbjct: 395 FVQSLKIDFFKHRVFAITPKGEVIDLPTGSTPIDFAYQIHSEIGDHCVGAKVNNKMVPLD 454
Query: 612 HVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAAL 663
+ + + ++V+I+ N S+S WL+ AKT +A+ I +R++ ++
Sbjct: 455 YQIESGDLVDILVQKNKKPSES-------WLKIAKTSAAKQHIRSVIRKETSV 500
>gi|420187166|ref|ZP_14693188.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
gi|394256604|gb|EJE01533.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
Length = 729
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHKIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|227364865|ref|ZP_03848912.1| GTP diphosphokinase [Lactobacillus reuteri MM2-3]
gi|325682510|ref|ZP_08162027.1| GTP diphosphokinase [Lactobacillus reuteri MM4-1A]
gi|227070128|gb|EEI08504.1| GTP diphosphokinase [Lactobacillus reuteri MM2-3]
gi|324978349|gb|EGC15299.1| GTP diphosphokinase [Lactobacillus reuteri MM4-1A]
Length = 751
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 300/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV +A A AH Q+R+SGEP+IIHP++VA IL L +D E
Sbjct: 16 EDVQKMVSSYMNEEHVALVEKAYHFAEVAHHDQRRKSGEPYIIHPIQVAGILANLHMDPE 75
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 76 TVCAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIRYKSNKEQM----A 127
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 128 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 187
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++E+ K++ K I D LDL
Sbjct: 188 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYIDESIKLIKKAIAD---LDLGP-N 243
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +++ + +RI++ + CY LG
Sbjct: 244 VEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVV------------DSIRDCYAALG 291
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT +M IAE G+
Sbjct: 292 AIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTIIG---PEGRPLEVQIRTHKMHEIAEYGV 348
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 349 AAHWAYK-----------------EGKTNGIQQTQDSQKLNVVKEILELRSESQG---TD 388
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKG+ +D AY IHTE+GN AKVNG +V
Sbjct: 389 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 448
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W + TR AR+KI +F R
Sbjct: 449 DYEIKNGDIVDILT-----SSSSAGPSRDWFDLVSTRRARNKIRQFFR 491
>gi|167756850|ref|ZP_02428977.1| hypothetical protein CLORAM_02399 [Clostridium ramosum DSM 1402]
gi|237734560|ref|ZP_04565041.1| GTP pyrophosphokinase [Mollicutes bacterium D7]
gi|365832567|ref|ZP_09374100.1| RelA/SpoT family protein [Coprobacillus sp. 3_3_56FAA]
gi|374625687|ref|ZP_09698103.1| RelA/SpoT family protein [Coprobacillus sp. 8_2_54BFAA]
gi|167703025|gb|EDS17604.1| RelA/SpoT family protein [Clostridium ramosum DSM 1402]
gi|229382380|gb|EEO32471.1| GTP pyrophosphokinase [Coprobacillus sp. D7]
gi|365260512|gb|EHM90469.1| RelA/SpoT family protein [Coprobacillus sp. 3_3_56FAA]
gi|373915347|gb|EHQ47118.1| RelA/SpoT family protein [Coprobacillus sp. 8_2_54BFAA]
Length = 741
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 306/533 (57%), Gaps = 51/533 (9%)
Query: 140 YLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y++ E ++L+ +A E H+GQKR+SGEP+ IH + VA IL L+ +IAAGLLH
Sbjct: 23 YITNQESIDLINQAYDFIMEKHEGQKRKSGEPYTIHLIWVAYILATLQTGPATIAAGLLH 82
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +ED V + E + E FG + +VEG V+K+GK+ K+E+ DV A++ R++++
Sbjct: 83 DVMEDCGV-SREEMVERFGEEITTLVEG---VTKIGKMPFKDES----DVYAENHRKIYI 134
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++K ADRLHNMRTL MPPHKQ I+ ETL+V+ P+A LG+ IK+ELE+
Sbjct: 135 AMAKDIRVILIKFADRLHNMRTLQFMPPHKQKRISRETLEVYTPIAHRLGINDIKTELED 194
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y + Y+++ + +A ++E +E+ +M ++ Q LD + + I K
Sbjct: 195 LSLSYLDPVAYSEISKLLA----TKQEERKESVAKMMASVK--QILDDNSYQYRILGRAK 248
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + + +E+ + LRII + K CY +LGL+H + P
Sbjct: 249 SIYSIYKKMFVKKKRFDELYDLYALRIITQDK------------MDCYGILGLIHDQYRP 296
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PKPN YQSLHT++I E E+QIRTEEMD +AE G+AAH+
Sbjct: 297 IPGRFKDYIAMPKPNMYQSLHTSVIG---EDGNTFEIQIRTEEMDELAELGVAAHW---- 349
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ +G + I ++ WL ++ + + ++E+ D++ R
Sbjct: 350 -----------RYKENKGYSSKKEQQEIGEKLQWLREFISLSDD-IKDGDAKEYYDSLKR 397
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ + V+V TP+G+I LP G+T +D+AY IHTE+G+K V A VN +V L +
Sbjct: 398 DIFEANVYVLTPQGKIVELPNGSTPIDFAYRIHTEVGHKAVGAIVNNVMVPIDTKLNTGD 457
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 671
VVEI T +K + + WL+ +T AR+KI +F+ + A + E D
Sbjct: 458 VVEIKT-----NKQSLGPSEDWLKFVRTAGARNKIRQFIANREAETKKETIED 505
>gi|417918672|ref|ZP_12562222.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
gi|342828342|gb|EGU62716.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
Length = 739
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 309/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H+GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHNGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|39938612|ref|NP_950378.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Onion
yellows phytoplasma OY-M]
gi|39721721|dbj|BAD04211.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Onion
yellows phytoplasma OY-M]
Length = 796
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 318/557 (57%), Gaps = 71/557 (12%)
Query: 128 ERLWEDLRPTIS--YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ L++DL IS L+ + +A + A E H GQ R +GEP+IIHP V +IL +L
Sbjct: 63 DTLYQDLMAVISKNIQDATILQKITQAYLFAKEKHHGQTRFTGEPYIIHPCAVTKILAQL 122
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
+ ++ AGLLHD +EDTN T + + FG V +V TK++K+ KN+ H
Sbjct: 123 NSEPNTLMAGLLHDVLEDTNA-TMQDLTSLFGEDVAYLVYRATKLTKIAF--HKNQGH-- 177
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
AD+ ++MFLAM +++RV+IVK+ADRLHNM+TL+ MP KQ IA ETL++ APL
Sbjct: 178 ----ADNQQKMFLAMAKDIRVVIVKIADRLHNMQTLNSMPSEKQLRIAKETLEIHAPLTH 233
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA-NKIL--MKKIEDDQ 362
LG+++IKS+LE+LS Y ++Y RV++L + +++ EE+ KI+ +K + D
Sbjct: 234 RLGLFEIKSQLEDLSLRYAFPQEYY----RVSNLIRLKKQQREESITKIITNIKSLLDSH 289
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
L T+K ++++ YSIYK ++K + S E+ + +RII+ P
Sbjct: 290 QLKNYTIKGRVKNI----YSIYKKIVKRKVSFEEIFDLLAIRIIV---------PTVD-- 334
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+CY LG++HG ++P+P KDYIA PKPN YQSLHTT+ L + E+QIRT+EM
Sbjct: 335 -LCYQCLGIIHGHFSPLPLRFKDYIAVPKPNLYQSLHTTV---LTKDGSLFEMQIRTQEM 390
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
D IAE+GIAAH++ + S K + L A ++ W +QE
Sbjct: 391 DEIAEKGIAAHWA----------YKENKTYSQEAKQLEL-----AKKLRW------YQEL 429
Query: 543 FVGNM--------TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
M T +EFVD+I D+L V+VFTP E+ LPKG+T +D+A+ IH+ +
Sbjct: 430 VKITMDAKNHPEETPKEFVDSIKNDILSDNVYVFTPTQEVFELPKGSTPIDFAFRIHSAV 489
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIM 654
G+KM AA +NG +V + L N +++ I T +K+ +K WL KT A+ KI
Sbjct: 490 GSKMTAAIINGQIVPIDYQLKNGDIISIKT-----NKNILSVNKDWLRMVKTTHAKRKIK 544
Query: 655 KFLREQAALSASEITAD 671
FL++ + +E A+
Sbjct: 545 GFLKKDIKENKTEYLAE 561
>gi|55822133|ref|YP_140574.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
gi|55738118|gb|AAV61759.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
Length = 739
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYAPDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVYKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNGYQSIHTT----VYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT NA S F + W++ KT AR++I +F + Q
Sbjct: 449 VVEIIT-NAHS----FGPSRDWIKMVKTTKARNRIRQFFKNQ 485
>gi|347731510|ref|ZP_08864606.1| relA/SpoT family protein [Desulfovibrio sp. A2]
gi|347519829|gb|EGY26978.1| relA/SpoT family protein [Desulfovibrio sp. A2]
Length = 722
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 204/520 (39%), Positives = 301/520 (57%), Gaps = 66/520 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L L+++A + A AH GQ R SGEP++ HP+ VA L E+ D +IAAGLLHDTVEDT
Sbjct: 19 DLALIQKAYVYAAAAHAGQTRLSGEPYLSHPLAVAYSLAEMRFDEAAIAAGLLHDTVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
V + E I+ FG V +V+G TK+S++ S ++ +A+++R+M LAM ++
Sbjct: 79 TV-SIEDIDTLFGEEVADVVDGVTKISQM-------TFESKEEAQAENIRKMILAMAHDI 130
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV+IVKLADRLHNMRTL PHKQ IA ET+ ++APLA LG+++IK ELE+LSF Y
Sbjct: 131 RVLIVKLADRLHNMRTLDFQKPHKQKLIAQETMDIYAPLANRLGLHRIKLELEDLSFRYL 190
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ YA++ + ++ E++ I + LD VK E+R K YSIY
Sbjct: 191 KPDVYAQINEWL------DTNQVVESHYIERVITRIKEILDKNEVKGEVRGRIKHKYSIY 244
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K +++ ++++++ I R+I+ + CY VLGL+H W P+ K
Sbjct: 245 KKMVQQDLTLDDMHDIIAFRVIV------------DDLRDCYAVLGLMHAQWKPVHGRFK 292
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRVFV 500
DYI+ PK NGY+SLHTT+I E R+E+QIRTEEM +AE G+A+H+ GRV
Sbjct: 293 DYISMPKANGYRSLHTTVIGPEGE---RMEIQIRTEEMHRLAEHGVASHWLYKEGGRV-- 347
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+PR + +WL+ I + Q+ S+EF+ ++ DL
Sbjct: 348 ------------NPRDLE----------QFTWLHEILDRQK---METDSKEFMQSLRLDL 382
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTPRG++K LP+GAT +D+AY+IHTE+GN+ AKVNG LV L + + +
Sbjct: 383 FKDEVYVFTPRGDVKELPEGATPIDFAYLIHTEVGNRCAGAKVNGKLVPLGTALKSGDTI 442
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
E+IT N+ + WL+ KT AR +I ++R +
Sbjct: 443 EVITDNSRRPS------RDWLKFVKTAKARSRIQHYIRTE 476
>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
Length = 750
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 297/528 (56%), Gaps = 72/528 (13%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H+GQ R+SGEP+I HPV VA +L L D IAAGLLHD VEDT+V
Sbjct: 42 LICRAFEFAYKLHEGQYRKSGEPYICHPVAVAGLLKYLGGDSTMIAAGLLHDIVEDTDV- 100
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
E IEE+FG+ V +VEG V+KL K N+ +++A++ R+MFLAM +++RVI
Sbjct: 101 KIEEIEEKFGSEVTLLVEG---VTKLSKFNFSNKT----ELQAENFRRMFLAMAKDIRVI 153
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL H+P HKQ S A ET ++FAPLA LG+ +IK ELE+LSF Y
Sbjct: 154 VVKLADRLHNMRTLQHLPSHKQLSKALETREIFAPLANRLGIGRIKWELEDLSFKYLEPN 213
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSIYKA 386
Y +++ VAD + E L + + L +K LD + ++ +I K Y IY+
Sbjct: 214 AYREIQELVADKRVDREARLLKMTENLRQK------LDRLGIECYDISGRPKHLYGIYRK 267
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+ + +EV I+ LRII++ + + CY L +VH + PIP KDY
Sbjct: 268 MYLKQKEFHEVYDISGLRIIVEKR------------EDCYRTLAIVHDSYRPIPGRFKDY 315
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
I PKPN YQSLHT +I +EVQIRT EM +AE GIAAH+
Sbjct: 316 IGLPKPNRYQSLHTGVIGITGRP---VEVQIRTVEMHHVAEYGIAAHW------------ 360
Query: 507 ARPNGRSPRGKTVCLNNANIAL-----RISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ K +N N+ + + +WL + EWQ + RE+++TI DL
Sbjct: 361 --------KYKETGYSNTNVNITTEDEKFTWLRQLLEWQSDL---KDDREYLETIKGDLF 409
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
V+ FTP+G++ +L G+T +D+AY IHTE+GN AKVN +V L N ++VE
Sbjct: 410 SEDVYAFTPKGDVISLKHGSTPIDFAYRIHTEVGNHCTGAKVNERIVPLDTPLKNGDIVE 469
Query: 622 IITY----------NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
I+T+ N++ + A R +QW + RS R +I+ RE
Sbjct: 470 ILTHKNGHPSLDWLNSVVTGGARNRIRQWYK----RSHREEILARGRE 513
>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
Length = 761
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 293/515 (56%), Gaps = 53/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+ +L+ RA + HDGQ+R SGEP+I HPV VA +L +L IAAG LHD VEDT
Sbjct: 50 DADLICRAFEFGYNLHDGQRRASGEPYICHPVAVAGLLRDLGGSGAMIAAGFLHDIVEDT 109
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+V T + +E+ FG VR++VEG TK+SKL K E +A++ R+MF+AM ++
Sbjct: 110 DV-TSDDLEKMFGKEVRQLVEGVTKLSKL-NFSSKKER------QAENFRRMFIAMAHDI 161
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+P K+ IA ET ++FAPLA LG+ + K ELE+L+F Y
Sbjct: 162 RVIVVKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGRFKWELEDLAFKYL 221
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E Y K++ VA+ + E L +IL + + L E+ K Y IY
Sbjct: 222 EPEAYRKIQLLVAEKRTDREARLTNVTEILQQGLTASGIECL-----ELSGRPKHLYGIY 276
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + + +E+ +A +RI++K + CY L +VH + PIP K
Sbjct: 277 QKMQRQQKEFSEIFDLAAIRILVKTN------------EECYRALAVVHDAFRPIPGRFK 324
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PKPN YQSLHTT++ + LE+QIRT++M IAE GIAAH+
Sbjct: 325 DYIGLPKPNRYQSLHTTVVSL---NGRPLEIQIRTQQMHHIAEYGIAAHWK--------- 372
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ G S R K + + +WL + +WQ E ++E+++ + +L
Sbjct: 373 --YKETGNSNRSKVTGTDE-----KFTWLRQLLDWQNEL---KDAQEYLENVKDNLFDDD 422
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G++ L +GAT VD+AY IHTE+GN AKVNG +V+ L+N ++VEIIT
Sbjct: 423 VYVFTPQGDVVPLSRGATTVDFAYRIHTEVGNHCAGAKVNGRIVTLDTHLSNGDIVEIIT 482
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+S+ + WL T A+++I ++ ++
Sbjct: 483 RE--NSRPSL----DWLNFVATTGAKNRIRQWYKK 511
>gi|350268673|ref|YP_004879981.1| GTP pyrophosphokinase [Oscillibacter valericigenes Sjm18-20]
gi|348593515|dbj|BAK97475.1| GTP pyrophosphokinase [Oscillibacter valericigenes Sjm18-20]
Length = 738
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 313/539 (58%), Gaps = 75/539 (13%)
Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGE-LELD 188
++ L T+ +P + +R A A ++H+GQ R+SGEP+IIHP+ VA+I+ E L+LD
Sbjct: 7 YQKLEDTVRAYNPAADFVHIRAAFEYAEKSHNGQTRKSGEPYIIHPLAVAQIVAEELKLD 66
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
ESI A LLHD +EDT T E + + F TV +VEG VSKL +++ + +D
Sbjct: 67 SESIEAALLHDVIEDTPA-THEEVAKRFSPTVADLVEG---VSKLTRIQYATK----EDE 118
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+ ++LR+M +AM++++RVI++K++DRLHNMRT+ + P KQ + ET++++AP++ LG
Sbjct: 119 QMENLRKMLIAMSKDIRVILIKISDRLHNMRTMEYQSPEKQKQKSLETMEIYAPISHRLG 178
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED--DQFLDL 366
M +IK ELE+LS Y + + ++ ++ + E++ MK+ ++ DQ L
Sbjct: 179 MQRIKWELEDLSLKYLDPVGFDEIVSKLDEKRTEYDD--------FMKRTQEQIDQRLTE 230
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
M ++ ++ K PYSIY+ + S++E+ + R+++ VG CY
Sbjct: 231 MDIRHKVYGRMKHPYSIYRKMFNQNKSLDEIFDLFAFRVVV-----DNVGD-------CY 278
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
+VLG++H I+ PI KDYI TPKPNGYQSLHTT+ IPF EVQIRT+E
Sbjct: 279 NVLGVIHDIYKPILGRFKDYIGTPKPNGYQSLHTTVMGGDGIPF--------EVQIRTQE 330
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M +AE G+AAH+ + NG+ A + W+ + E QE
Sbjct: 331 MHDVAEYGVAAHWK-----------YKQNGQG----------AGTEGKYEWVRRLLENQE 369
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
+ E++ ++ D+ VFVFTP G+++NLP GAT +D+AY +H+ +GN M+ A
Sbjct: 370 ----GTDAEEYIRSLKVDMFADEVFVFTPGGDVQNLPAGATPIDFAYSVHSAVGNHMIGA 425
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
KVNG +V+ L N ++VEI+T SK+A + W++ A++ AR KI ++ +++
Sbjct: 426 KVNGRIVTYDFQLKNGDIVEILT-----SKTAKGPSRDWMKIARSSEARSKIRQWFKKE 479
>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
Length = 765
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 305/546 (55%), Gaps = 57/546 (10%)
Query: 144 NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVED 203
+ +L+ A A+ H+GQ RRSGEP+I HPV VA ++ +L IAAG LHD VED
Sbjct: 43 QDAKLIAEAFQFAYNLHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIAAGFLHDIVED 102
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
T++ T E I+E+FG VR +VEG TK+SK K K E +A++ R+MFLAM ++
Sbjct: 103 TDI-TCEEIQEKFGEGVRHLVEGVTKLSKF-KFSSKTER------QAENFRRMFLAMAKD 154
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMY 323
+RV++VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA LG+ + K ELE+LSF Y
Sbjct: 155 IRVVVVKLADRLHNMRTLEHLKPEKQKQIALETREIFAPLANRLGIGRFKWELEDLSFKY 214
Query: 324 TNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSI 383
E + +++ VAD + E +E +IL ++ D +++ E++ K Y I
Sbjct: 215 LEPEAFQEIRELVADRRADREARIENVIQILHQRF-DQAGIEI----EELKGRPKHLYGI 269
Query: 384 YKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAM 443
Y+ + + + E+ +A +R+I+K + + CY L ++H + PIP
Sbjct: 270 YQKMQQQQKEFEEIYDLAGVRVILKTR------------EDCYRALAVIHDAFKPIPGRF 317
Query: 444 KDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGL 503
KDYI PKPN YQSLHTT+I + +E+QIRT EM IAE GIAAH+ + TG
Sbjct: 318 KDYIGLPKPNRYQSLHTTVIGTYGKP---IEMQIRTMEMHHIAEYGIAAHWLYK--ETGG 372
Query: 504 VGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+P + +WL + EWQ + ++E++++I +L
Sbjct: 373 SSDFKPTAEDE--------------KFTWLRQLLEWQNDL---KDAQEYMESIRDNLFED 415
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVFTP+G++ L +GAT VD+AY IHTE+G+ M A+VNG L N ++VEII
Sbjct: 416 DVFVFTPQGDVVALSRGATPVDFAYHIHTEVGHHMKGARVNGRWTVLDAPLHNGDIVEII 475
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVAD 679
T SK+ WL T SAR++I ++ RE+ + +G +D
Sbjct: 476 T-----SKNC-HPSLDWLNFVVTPSARNRIRQWYKRSHREENIARGRSMLEKVIGKSGSD 529
Query: 680 SGEESE 685
S +SE
Sbjct: 530 SLMKSE 535
>gi|148543952|ref|YP_001271322.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus reuteri DSM 20016]
gi|184153347|ref|YP_001841688.1| GTP pyrophosphokinase [Lactobacillus reuteri JCM 1112]
gi|148530986|gb|ABQ82985.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri DSM 20016]
gi|183224691|dbj|BAG25208.1| GTP pyrophosphokinase [Lactobacillus reuteri JCM 1112]
Length = 745
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 300/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ +S Y++ + LV +A A AH Q+R+SGEP+IIHP++VA IL L +D E
Sbjct: 10 EDVQKMVSSYMNEEHVALVEKAYHFAEVAHHDQRRKSGEPYIIHPIQVAGILANLHMDPE 69
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG LHD VEDT T + I+E FG T+ IV+G+TK LGK++ K+ + A
Sbjct: 70 TVCAGYLHDIVEDTGA-TLDDIKELFGPTIAMIVDGDTK---LGKIRYKSNKEQM----A 121
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
R++ LAM++++RV+IVKLADRLHNMRTL H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 122 ATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGIS 181
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++E+ K++ K I D LDL
Sbjct: 182 TIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYIDESIKLIKKAIAD---LDLGP-N 237
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +++ + +RI++ + CY LG
Sbjct: 238 VEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVV------------DSIRDCYAALG 285
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H W P+P KDYIA PK NGYQSLHTT+I LEVQIRT +M IAE G+
Sbjct: 286 AIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTIIG---PEGRPLEVQIRTHKMHEIAEYGV 342
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + + +++ + I E + E G +
Sbjct: 343 AAHWAYK-----------------EGKTNGIQQTQDSQKLNVVKEILELRSESQG---TD 382
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ I D+ +V+ FTP+G++ +PKG+ +D AY IHTE+GN AKVNG +V
Sbjct: 383 EFMQGIQSDIFTDKVYAFTPKGDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 442
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W + TR AR+KI +F R
Sbjct: 443 DYEIKNGDIVDILT-----SSSSAGPSRDWFDLVSTRRARNKIRQFFR 485
>gi|420183290|ref|ZP_14689423.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|420234790|ref|ZP_14739350.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
gi|394249753|gb|EJD94966.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|394304033|gb|EJE47443.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
Length = 729
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
Length = 761
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 291/512 (56%), Gaps = 54/512 (10%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
++V RAL A+ HDGQ R SGEP+I+HP+ VA IL +L IAAG LHD VEDT+V
Sbjct: 60 DVVCRALDFAYRLHDGQCRASGEPYILHPISVAAILKDLGGSNAMIAAGFLHDVVEDTDV 119
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
+ ++IEE+FG +R++VEG TK+SKL + K E+ +A++ R+MFLAM +++RV
Sbjct: 120 -SCDQIEEKFGKEIRQLVEGVTKLSKLS-FESKTES------QAENFRRMFLAMAQDIRV 171
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
IIVKLADRLHNMRTL H+ KQ I+ ET ++FAPLA LG+ QIK ELE+++F Y
Sbjct: 172 IIVKLADRLHNMRTLQHLRSEKQVLISRETREIFAPLANRLGLGQIKWELEDIAFKYIEP 231
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
E Y ++ VA+ ++ +++L E K+L D+ + EI K Y I++
Sbjct: 232 EQYQMMESLVAETHESRQEQLTEVTKVL-----GDRLASMGIDDFEISGRPKHLYGIFRK 286
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+ + + NE+ I +R+I+ K + CY VL +VH + PIP KDY
Sbjct: 287 MERQKKQYNEIYDIQAVRVIVNTK------------EECYRVLAVVHDHFCPIPGRFKDY 334
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
I PKPN YQSLHT +I + +EVQIRT EM IA+ GIAAH+
Sbjct: 335 IGLPKPNRYQSLHTAVIGPKGQP---VEVQIRTWEMHHIADYGIAAHW------------ 379
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ +V + +WL + EWQ E +E++D++ DL S V+
Sbjct: 380 -----KYKESNSVSKPLKGDDQKFTWLRQLVEWQREL---KDPQEYLDSVKEDLFDSEVY 431
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
VF+P+G++ LP+GAT VD+AY +HTE+GN A VN +V L + ++V I+T N
Sbjct: 432 VFSPKGDVYCLPRGATPVDFAYRVHTEVGNHCSGALVNNVMVPLQRPLKHGDIVTILTQN 491
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ W+ T SA+ +I ++ +
Sbjct: 492 NAHPST------DWINFVATNSAKSRIRQWFK 517
>gi|401681975|ref|ZP_10813870.1| GTP diphosphokinase [Streptococcus sp. AS14]
gi|400185281|gb|EJO19511.1| GTP diphosphokinase [Streptococcus sp. AS14]
Length = 739
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 306/527 (58%), Gaps = 55/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L T YL+ ++ +++AL+ A + H GQ RRSGEP+I+HP++VA IL +L+LD ++A
Sbjct: 13 LALTRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILAKLKLDAVTVA 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
G LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++
Sbjct: 73 CGFLHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM+E++RVI+VKLADRLHNMRTL H+ HKQ I+ ET++++APLA LG+ +K
Sbjct: 125 RKMLMAMSEDIRVILVKLADRLHNMRTLKHLRKHKQERISRETMEIYAPLAHRLGISSVK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+LSF Y N ++ K+ + + +E E+ +EE + + + + + +I
Sbjct: 185 WELEDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVQKI------ETYAGERNLHGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + + +E+ + +R I+ Q Y +LG +H
Sbjct: 239 YGRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH
Sbjct: 287 ELWRPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V ++ A+ ++W+ + E Q++ + +++FV
Sbjct: 343 WAYKKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 443 LRTGDQVEIIT-----NANSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|402833070|ref|ZP_10881692.1| GTP diphosphokinase [Selenomonas sp. CM52]
gi|402281437|gb|EJU30072.1| GTP diphosphokinase [Selenomonas sp. CM52]
Length = 740
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 307/537 (57%), Gaps = 55/537 (10%)
Query: 124 EDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
E SP + L SY + +L+RRA LA AH GQKR SGE +IIHP+ VA+IL
Sbjct: 3 EMSPVTIDMILEAVKSYQPNADTDLIRRAYELADAAHKGQKRVSGEDYIIHPLAVAKILT 62
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
+L++D +I+A +LHD VEDT T + + E FG V +++G V+KLG+++ K
Sbjct: 63 DLQIDDITISAAILHDVVEDTTH-TLDEMRELFGDEVAMLIDG---VTKLGRIQYK---- 114
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S ++ + + R+MFLAM +++RVI++KLADRLHNMRTL +M KQ IA ET++++APL
Sbjct: 115 SKEEQQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAPL 174
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ +K ELE+L Y + + Y + V +E + ++EA++ +++K+E+
Sbjct: 175 ANRLGISNVKWELEDLCLRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEEAH- 233
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ EIR K YSIYK + + + I+E+ ++ LR+ L +
Sbjct: 234 -----ITAEIRGRAKHFYSIYKKMKRDQKDISEIYDLSALRV------------LVDSVK 276
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY VLG++H +W P+P KDYIA PK NGYQSLHTT+I Y LE+QIRT M
Sbjct: 277 DCYGVLGIIHAMWKPLPGRFKDYIAMPKSNGYQSLHTTVICRGYP----LEIQIRTFAMH 332
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
++E G+AAH+ + G+S G T + ++SWL + Q E
Sbjct: 333 KVSEYGVAAHWK-----------YKEAGKSV-GATCEYDQ-----KMSWLRQMVSLQHEL 375
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
RE+ + + D+ VFVFTP+G++ +LPKG+ +D+AY IHTE+G+ V AKV
Sbjct: 376 DD---PREYFEALKVDVFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAKV 432
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
NG +V + L N ++V IIT + S S + WL + R KI + ++Q
Sbjct: 433 NGKIVPLEYKLKNGDIVSIITNKSNSGPS-----RDWLNIVASSETRTKIRSWFKKQ 484
>gi|27468233|ref|NP_764870.1| GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57867129|ref|YP_188772.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242242906|ref|ZP_04797351.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251811038|ref|ZP_04825511.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875942|ref|ZP_06284809.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|293366410|ref|ZP_06613088.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417655951|ref|ZP_12305642.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|417659668|ref|ZP_12309268.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|417908499|ref|ZP_12552256.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|417911252|ref|ZP_12554959.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|417912614|ref|ZP_12556303.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|418327807|ref|ZP_12938944.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418603642|ref|ZP_13167024.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|418609265|ref|ZP_13172424.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|418611758|ref|ZP_13174827.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|418615702|ref|ZP_13178641.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|418616388|ref|ZP_13179313.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|418623420|ref|ZP_13186131.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|418626110|ref|ZP_13188736.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|418628145|ref|ZP_13190702.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|418630931|ref|ZP_13193403.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|418633468|ref|ZP_13195881.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|418664077|ref|ZP_13225573.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|419771360|ref|ZP_14297414.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420163791|ref|ZP_14670525.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|420165616|ref|ZP_14672307.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|420168637|ref|ZP_14675245.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|420170335|ref|ZP_14676896.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|420173158|ref|ZP_14679653.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|420174606|ref|ZP_14681055.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|420184598|ref|ZP_14690707.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|420190242|ref|ZP_14696186.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|420192570|ref|ZP_14698428.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|420196874|ref|ZP_14702608.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|420202331|ref|ZP_14707924.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|420204546|ref|ZP_14710104.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|420206053|ref|ZP_14711563.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|420209134|ref|ZP_14714572.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|420212181|ref|ZP_14717534.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|420214089|ref|ZP_14719369.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|420216238|ref|ZP_14721454.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|420220573|ref|ZP_14725532.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|420221584|ref|ZP_14726512.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|420225825|ref|ZP_14730652.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|420227420|ref|ZP_14732188.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|420229734|ref|ZP_14734438.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|420232145|ref|ZP_14736786.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|421606876|ref|ZP_16048128.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
gi|59798397|sp|Q8CS97.1|RELA_STAES RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|81674357|sp|Q5HNR8.1|RELA_STAEQ RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|27315779|gb|AAO04914.1|AE016748_148 GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57637787|gb|AAW54575.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242233621|gb|EES35933.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251805456|gb|EES58113.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294967|gb|EFA87494.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|291319444|gb|EFE59812.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329735305|gb|EGG71597.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|329737201|gb|EGG73455.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|341653575|gb|EGS77342.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|341655860|gb|EGS79583.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|341657324|gb|EGS81014.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|365232585|gb|EHM73576.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407151|gb|EHQ78016.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|374408270|gb|EHQ79102.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|374410877|gb|EHQ81607.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|374816752|gb|EHR80951.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|374821214|gb|EHR85281.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|374821769|gb|EHR85816.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|374830622|gb|EHR94388.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|374833733|gb|EHR97404.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|374836241|gb|EHR99829.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|374838528|gb|EHS02068.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|374839221|gb|EHS02739.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|383361586|gb|EID38956.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394232917|gb|EJD78528.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|394233346|gb|EJD78954.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|394235417|gb|EJD80989.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|394240336|gb|EJD85760.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|394240673|gb|EJD86096.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|394244837|gb|EJD90169.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|394257249|gb|EJE02171.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|394259133|gb|EJE04003.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|394260743|gb|EJE05547.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|394266848|gb|EJE11466.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|394269739|gb|EJE14269.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|394273556|gb|EJE17987.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|394277892|gb|EJE22209.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|394279362|gb|EJE23670.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|394280021|gb|EJE24312.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|394284011|gb|EJE28172.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|394285926|gb|EJE29992.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|394290379|gb|EJE34240.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|394292328|gb|EJE36087.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|394293259|gb|EJE36982.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|394297044|gb|EJE40656.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|394298913|gb|EJE42471.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|394301468|gb|EJE44924.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|406657456|gb|EKC83843.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
Length = 729
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|304440364|ref|ZP_07400253.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371116|gb|EFM24733.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 713
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 303/520 (58%), Gaps = 58/520 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +L+L++ A LA + H GQKR SGE +IIHP VA IL ++ +D +I AGLLH
Sbjct: 11 SYNEHADLDLIKEAFDLAEKHHKGQKRNSGEDYIIHPFNVALILADMNMDTPTIVAGLLH 70
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T+E I+EEFG + +V+G TK+ KL K K EN +A+++R+M L
Sbjct: 71 DVVEDTDV-TYEDIKEEFGQEIADLVDGVTKLKKLN-YKTKKEN------QAENIRKMVL 122
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVIIVKLADR HNMRTL +M P K+ A ET++++AP+A LGM ++K ELE+
Sbjct: 123 AMAKDIRVIIVKLADRTHNMRTLEYMTPEKKIEKANETIEIYAPIADRLGMSKVKWELED 182
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y + ++Y K + D+ + E E+ K L+ +I+ + ++ +K +I K
Sbjct: 183 LSLRYLDPDNYYK----LVDMVNKRRNEREDLIKKLIDEIKAE--VEKAGIKADIHGRPK 236
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK ++ + S +E+ + +R+ L + CY VLG VH ++ P
Sbjct: 237 NFYSIYKKMIIKKKSFDEIYDLQAVRV------------LVDTVKDCYGVLGAVHNLYKP 284
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK N YQSLHTT+I E+ EVQIRT EM AE GIAAH+
Sbjct: 285 IPGRFKDYIAMPKSNNYQSLHTTVIDSNGET---FEVQIRTYEMHQTAEYGIAAHW---- 337
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ K+ + + ++WL + EWQ++ + +F++T+
Sbjct: 338 ----------------KYKSGATKSTSFDENLTWLRQLLEWQKDV---NDADDFMETLKI 378
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D VFVFTP G++ NLP+G+T +D+AY IH+++GN V AK++G +V T+ L + +
Sbjct: 379 DFFADEVFVFTPNGDVVNLPEGSTPIDFAYRIHSQVGNTCVGAKISGRIVPLTYKLKSGD 438
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+V +IT N S S WL K+ A+ KI ++ +
Sbjct: 439 IVSVIT-NPNSGPSL-----DWLNIVKSPQAKKKIQQYFK 472
>gi|418635800|ref|ZP_13198160.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
gi|374841502|gb|EHS04973.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
Length = 729
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 295/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLSP++ + V ++ LA+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++E F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
S Y ++ Y R+ +L K+ E E K + I D + M +K EI K
Sbjct: 190 TSLRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +R+I+ + CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AK NG +V +V+ +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|445371359|ref|ZP_21425952.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5460]
gi|445386780|ref|ZP_21427668.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5461]
gi|444751339|gb|ELW76091.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5461]
gi|444751514|gb|ELW76250.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5460]
Length = 739
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 308/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y+S ++L+LV +A A +AH Q R+SGEP+IIHP++VA IL +L LD ++A G LH
Sbjct: 18 AYMSADDLKLVEKAWHYATDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T + +E +FG VR IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTEK-TLDDLEADFGTDVRNIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E ++E ++ KI+ + + ++ K
Sbjct: 190 TAFRYLNEVEFYKISHMMKEKRREREALVDE----IVYKIK--TYTAEQGLVGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ + + +++ + +R +++ Y +LG +H +W P
Sbjct: 244 HIYSIFRKMRDKKKRFDQIYDLIAIRCVME------------THSDVYAMLGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIANPKSNAYQSIHTT----VYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKK 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G V ++ AL ++W+ + E Q+ N ++ FVD++
Sbjct: 348 GIKGKV-----------------DSKESALGMNWIKDLVELQD--ASNGDAKGFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP+G+++ LPK + +D+AY IHT++G K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPKGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT NA S F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-NAHS----FGPSRDWIKMVKTTKARNKIRQFFKNQ 485
>gi|406981761|gb|EKE03162.1| hypothetical protein ACD_20C00238G0002 [uncultured bacterium]
Length = 718
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 305/515 (59%), Gaps = 55/515 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E++ +R A A H GQ R S EP+I+HPVEVA IL L+ D ++I A LLHD +EDT
Sbjct: 23 EIKKIRSAYDFAASWHKGQYRISEEPYIVHPVEVANILANLQADTDTICAALLHDILEDT 82
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ E+I+E FG V +V G TK+SK +S ++ +A++ R+MFLAM E+V
Sbjct: 83 DTKP-EQIKELFGEDVLNLVNGVTKLSKYS-------FNSKEERQAENFRKMFLAMAEDV 134
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI +KLADRLHNMRTL++M PHKQ IA ET+++FAPLA LGM +I++ELE+LS Y
Sbjct: 135 RVIFLKLADRLHNMRTLNYMAPHKQKEIAQETVEIFAPLANRLGMGKIRAELEDLSLRYL 194
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
N E Y + +A L + + E + + ++ KI + L M ++ I K SIY
Sbjct: 195 NPEKYFE----IAQLVAQSKAERDLTVQAIIDKI--NSSLKNMNIEAVITGRAKNYNSIY 248
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + + S ++ I RI++ ++ CY VLG++H + PIP K
Sbjct: 249 NKMTRQQKSYQDLYDITAARIVV------------DNEKECYEVLGVIHSAFKPIPGRFK 296
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N Y+SLHT++I + LEVQIRT EM +AE GIAAH+
Sbjct: 297 DYIAMPKSNLYRSLHTSVIGPRGKP---LEVQIRTHEMHDVAEFGIAAHW---------- 343
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ +G S R +++++ ++ SWL + E+Q++ ++E+V+++ DL +
Sbjct: 344 -RYKESGGSTR------SSSDVDMKFSWLRKLIEFQQDI---KDAQEYVNSVKLDLFSDQ 393
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVF+P+G++ +LP GAT +D+AY IHTE+G+K V A VNG +VS L N +++EI+T
Sbjct: 394 VFVFSPKGDVIDLPSGATPIDFAYRIHTEVGHKCVGALVNGRIVSLDSKLKNGDIIEILT 453
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
SK A R W+ T AR++I ++ ++
Sbjct: 454 -----SKQAKPRLG-WINIVVTNQARNRIRQWFKK 482
>gi|238854672|ref|ZP_04645002.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260664385|ref|ZP_05865237.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
gi|238832462|gb|EEQ24769.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260561450|gb|EEX27422.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
Length = 745
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 300/542 (55%), Gaps = 55/542 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V +A A +AH GQKR SG+P+IIHP +VA + L LD +++AAG LHD
Sbjct: 19 YMNKEQLAFVEKAYEYAEKAHSGQKRASGQPYIIHPTQVAGTVANLGLDPDTVAAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+ EFG V IV+G TK++K E S ++ A++ R+M +A
Sbjct: 79 TVEDT-PVTNDDIKREFGEDVAFIVDGVTKLNKY-------EYKSHEEFLAENHRKMLIA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ETL ++APLA LG+ IK ELE++
Sbjct: 131 MAQDLRVIMVKLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDM 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N E Y + ++ E E ++ A L LD + +K +I K
Sbjct: 191 SLHYLNPEAYYNIVNQMNSKRSEREGYIDTAITYLKDT------LDGLHIKYDIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ +E+ + +R+I++ + CY VLG VH W P+
Sbjct: 245 IYSIYKKMVNKHKDFSEIFDLLAVRVIVQ------------NVRDCYAVLGAVHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRT++M +AE G+AAH++ +
Sbjct: 293 PGRFKDYIAVPKANGYQSLHTTIIG---PGGKPLEIQIRTQQMHEVAEYGVAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
+G T + + ++ I E ++E + EF+ ++ D
Sbjct: 348 ---------------KGDTQAVEATSAGRKLDMFREILELKDE---TSNADEFMKSVKSD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ V+VFTP+G++ L KG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 390 IFSDSVYVFTPKGDVYELAKGSVPLDFAYAIHTQVGSHAVGAKVNDKLVPLDYRLKNGDV 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
V I+T +S + W+ KT AR+KI +FL+EQ E + V + + +
Sbjct: 450 VSILT------QSNAEPSPDWIHMVKTSRARNKIRRFLKEQRKDENIEKGRNDVANLLRE 503
Query: 680 SG 681
G
Sbjct: 504 RG 505
>gi|327398631|ref|YP_004339500.1| (p)ppGpp synthetase I SpoT/RelA [Hippea maritima DSM 10411]
gi|327181260|gb|AEA33441.1| (p)ppGpp synthetase I, SpoT/RelA [Hippea maritima DSM 10411]
Length = 722
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 309/541 (57%), Gaps = 59/541 (10%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
++L+++ + I + +E L +A + A++ H QKR SGE +IIHP+ VARI+ + L
Sbjct: 10 QKLYDEFKKEIK-IDFDEKRL-DKAFLYAYQKHKNQKRASGESYIIHPIHVARIVNQFYL 67
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D S+ A LLHD +EDT T + I FG V +VE TK+SK+ + K EN
Sbjct: 68 DENSLIAALLHDVLEDTEA-TVDDINNFFGDDVLFLVEALTKISKV-RYKSSEEN----- 120
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
+AD+ R+M +AM ++RVI++KLADRLHNMRT+ ++ KQ IA ETL ++AP+A L
Sbjct: 121 -QADNFRKMIVAMASDLRVILIKLADRLHNMRTICYLKEEKQKRIAKETLDIYAPIAHRL 179
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+Y +KSELE+LSF Y ++Y +++++V KE ++ +E K + KI+ D ++
Sbjct: 180 GIYWLKSELEDLSFKYLYPKEYEEIEKKV----KETIQKKQEVIKFVENKIKQD--MEEA 233
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
++K E+ K YSIY + + R + + + +RII ++ CY
Sbjct: 234 SIKCEVSGRLKHLYSIYTKMQRKRVDFDGIYDLLAVRII------------TESEKDCYA 281
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG++H + P+P KDYIA PK N YQSLHTT+ S +E+QIRT+ M IAE
Sbjct: 282 ALGIIHKNYKPLPGRFKDYIALPKQNMYQSLHTTVFG---PSDIVVEIQIRTKRMHEIAE 338
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAHY + K ++ + + WL + +WQ+E
Sbjct: 339 EGIAAHY-----------------KYKENKVSIIDKHD--KQFLWLRHLLKWQKEV---R 376
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+EF++T+ DL V+VFTP G++K LP+GAT VD+AY IHTE+GN+ V A+VNG +
Sbjct: 377 NPKEFLNTVKVDLFRGEVYVFTPAGDLKVLPRGATPVDFAYAIHTEVGNRCVGARVNGRI 436
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
V + L+N ++VEI T A S S K WL+ T AR +I + +RE+ A E
Sbjct: 437 VPLNYKLSNGDIVEIFT-QANHSPS-----KDWLKFVVTSKARSRIKQKVREKEKAEAIE 490
Query: 668 I 668
I
Sbjct: 491 I 491
>gi|406980368|gb|EKE01979.1| hypothetical protein ACD_21C00011G0004 [uncultured bacterium]
Length = 705
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/531 (37%), Positives = 290/531 (54%), Gaps = 56/531 (10%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L++ L +SYL +++E + +A ++A EAH GQKR +GE FI HP VA IL ++ +D
Sbjct: 3 LYKQLHKKLSYLETDQIEQIHQAYLIASEAHLGQKRDTGENFITHPTAVACILADMHMDP 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+SI A LLHD +EDT T E+I +FG T+ +V+G TK++K+ + K EN+
Sbjct: 63 QSIIAALLHDVIEDTPT-TKEKIVSQFGQTIADLVDGLTKLTKI-EASNKAENY------ 114
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A+ R+M LAM++++RVI++KLADRLHNM+T+S + PHK+ IA ETL ++AP+A LGM
Sbjct: 115 ANSFRKMVLAMSQDIRVILIKLADRLHNMQTISGVMPHKRQRIAKETLDIYAPIANRLGM 174
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
I ELENL+F Y +K+ + Y H++ + K L + F+
Sbjct: 175 RDICVELENLAFAIIYPRRYRVLKKAIGQSYGSHKEVMATIEKEL-----NQAFIKSSLE 229
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
T I K Y +YK +L S + + RII+K VG CY L
Sbjct: 230 STTIAGREKHLYGVYKKMLSHHLSFANIMDVYAFRIIVKK-----VGD-------CYRAL 277
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G+ H ++ P+P KDYIA PK NGYQSLHT L L +E+QIRT+ MD +A G
Sbjct: 278 GIAHSLYKPVPGKFKDYIAIPKANGYQSLHTVL---LGPHGIPIEIQIRTQTMDQMANSG 334
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + G R N R + W+N + E Q+ +S
Sbjct: 335 IAAHWLYK------SGDKRANAAHIRAQ-------------QWINNLLEMQQN---TSSS 372
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++ + DL V++FTP+G I LP+GAT VD+AY +HT+IGN VAA+++ +
Sbjct: 373 LEFIENVKIDLFPDEVYLFTPKGNIMELPRGATAVDFAYAVHTDIGNTCVAARIDRKFLP 432
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L N +V+ IIT A WL+ T AR I +L+ Q
Sbjct: 433 LSTTLLNGQVISIITSTGAKPNPA------WLDFVITSKARSGIRSYLKNQ 477
>gi|120602193|ref|YP_966593.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris DP4]
gi|120562422|gb|ABM28166.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
Length = 717
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 309/531 (58%), Gaps = 75/531 (14%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ L++RA + A H GQ R SGEP++ HP+ VA +L E+ D ++AAGLLHDTVEDT
Sbjct: 19 DISLIQRAYVYAAAGHAGQTRLSGEPYLSHPLAVADLLAEMHFDEATVAAGLLHDTVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ E I+ EFG V IV+G TK+S++ S ++ +A+++R+M LAM+ ++
Sbjct: 79 DA-GIEDIDREFGEEVADIVDGVTKISQM-------TFDSKEEAQAENIRKMILAMSHDI 130
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV++VKLADRLHNMRTL HKQ SIA ETL ++APLA LG+++IK ELE+L YT
Sbjct: 131 RVLMVKLADRLHNMRTLDFQKSHKQQSIAQETLDIYAPLANRLGLHRIKLELEDLGLRYT 190
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKI--LMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
+ +A++ + E ++ E N I ++ +I + LD ++ E+R K S
Sbjct: 191 KPDVFAQITDWL------DENQMVERNLIDKVIARIR--EVLDANGIEGEVRGRIKHKSS 242
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
IYK + + +++E++ I R+I+ + + CY VLGL+H W P+
Sbjct: 243 IYKKMTQQGLALDEMHDIIAFRVIV------------ADLRDCYAVLGLMHAQWKPVHGR 290
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRV 498
KDYI+ PK NGYQSLHTT+I E R+E+QIRT EM +AE G+A+H+ +GRV
Sbjct: 291 FKDYISMPKANGYQSLHTTVIGPEGE---RIEIQIRTREMHRMAEHGVASHWLYKDAGRV 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+PR ++A + +WL I + Q+ S+EF+ ++
Sbjct: 348 --------------NPR---------DVA-QFTWLREILDRQKH---EADSKEFMHSLRL 380
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTPRG++K LP+GAT +D+AY+IH+++G+ AKVNG LV L + +
Sbjct: 381 DLFKDEVYVFTPRGDVKELPEGATPIDFAYLIHSQVGDHCAGAKVNGKLVPLGTPLVSGD 440
Query: 619 VVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLR-EQAALSAS 666
+E+IT RH + WL+ KT AR +I F+R E+ A S S
Sbjct: 441 TIEVITDT--------NRHPSRDWLKIVKTAKARSRIQHFIRTEERARSIS 483
>gi|82523943|emb|CAI78665.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[uncultured delta proteobacterium]
Length = 713
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 299/529 (56%), Gaps = 56/529 (10%)
Query: 129 RLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
R+ + L SYL+P +LE++++A + + H GQ R SGEP++ HP+EVA IL ++++D
Sbjct: 3 RINDILDKAQSYLTPEDLEMIKKAYVYSAAVHQGQVRLSGEPYLTHPMEVAGILADMKMD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+I +GLLHDTVEDT + T E++EEEFG V +V G TK+S + S ++
Sbjct: 63 AATIISGLLHDTVEDT-LSTVEQVEEEFGKDVAFLVSGLTKLSLIS-------FRSQEER 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M LAM+ ++R+++V+LADR+HNMRTL + P K+ IA ET+ V+APLA LG
Sbjct: 115 QAENFRKMILAMSSDIRILLVRLADRIHNMRTLQYQPLEKRVYIARETIDVYAPLANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK+ELE+LSF Y + E Y ++ RV + + EE K++ ++++
Sbjct: 175 INWIKTELEDLSFQYLSPEAYNELSMRVVQSNESRHRYTEEVKKLISEELKK------FK 228
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ E+ K Y IYK + + + +EV + R+I+ G CY
Sbjct: 229 IEGEVEGRAKHLYGIYKKMHEQHLNFDEVYDLIAFRVILDSDQEKG----------CYET 278
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
L +VH +W P+P KDYIA PK N YQSLHTT+I E RLE+QIRT M AE+
Sbjct: 279 LSVVHSLWKPVPGRFKDYIAMPKANNYQSLHTTVIGPYGE---RLEIQIRTRAMHEWAEK 335
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ R G+ N +I L I E Q+E
Sbjct: 336 GIAAHW-----------------RYKEGRAYKDEEEN---QIKKLREILEIQQEI---KN 372
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
+EF+ + L V+VFTP G++K+ PKGAT VD+AY IHT++GN+ + AKVN N+V
Sbjct: 373 PKEFMSDLRLALFPEEVYVFTPHGDVKSFPKGATPVDFAYSIHTDVGNQCIGAKVNRNIV 432
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
+ L N + +EIIT ++ K WL++ T A KI ++
Sbjct: 433 PLKYKLQNGDRLEIIT------QAGHNPSKDWLKYVVTTRAISKIRNWI 475
>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
Length = 748
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/533 (39%), Positives = 307/533 (57%), Gaps = 60/533 (11%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
ELV RA A+ H GQ+R SGEP+I HPV VA +L +L +AAG LHD +EDT V
Sbjct: 38 ELVCRAFNFAYRLHQGQRRASGEPYIAHPVAVAGLLRDLGGSAAMVAAGFLHDVIEDTTV 97
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRV 266
T E++E EFG VR++VEG TK+SK+ N S + +A+ R+MFLAM +++RV
Sbjct: 98 -TPEQLEAEFGPEVRQLVEGVTKLSKI--------NFSKTERQAESFRRMFLAMAQDIRV 148
Query: 267 IIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNA 326
I VKLADRLHNMRTL ++P K+ IA ET VFAPLA LG+++ K ELE+LSF Y
Sbjct: 149 IFVKLADRLHNMRTLEYLPEEKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEP 208
Query: 327 EDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKA 386
E Y +++ VA+ E +LE+A IL +++ Q L+L + ++ K YSIY+
Sbjct: 209 EAYRRMQDLVAEKRGIREAQLEDAIAILRQQL---QPLNLK--RCDLSGRPKHLYSIYQK 263
Query: 387 VLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDY 446
+ + + +E+ IA +R+I++ K CY VL +VH + P+P KDY
Sbjct: 264 MERQQKEFHEIYDIAAIRVIVETK------------DECYRVLAIVHDCFKPVPNRFKDY 311
Query: 447 IATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
I PKPN YQSLHT +I + LEVQIRT EM +AE GIAAH+ + VGH
Sbjct: 312 IGLPKPNRYQSLHTVVID---QGGRPLEVQIRTMEMHRVAEYGIAAHWKYKE-----VGH 363
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ G+ + + + WL + + Q + ++E++D++ +L + V+
Sbjct: 364 S-------LGQHLTTADE----KFVWLRQLLDTQNDL---KDAQEYLDSLKDNLFDNDVY 409
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY- 625
VFTP+G++ L +GAT VD+AY IHTE+GN KVN +V+ L N ++VEI+T+
Sbjct: 410 VFTPQGDVITLHQGATAVDFAYRIHTEVGNHCAGVKVNDRMVTLDTPLHNGDIVEILTHK 469
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
NA S WL A T +AR++I ++ RE+ L ++ +G
Sbjct: 470 NAHPSLD-------WLNFAITTTARNRIRQWYKRSHREENILRGRDMLEKELG 515
>gi|420177943|ref|ZP_14684277.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|420179188|ref|ZP_14685487.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
gi|394247130|gb|EJD92378.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|394254263|gb|EJD99234.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
Length = 729
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V ++L +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|418606224|ref|ZP_13169516.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|418621259|ref|ZP_13184038.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
gi|374409014|gb|EHQ79818.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|374829871|gb|EHR93665.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
Length = 590
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|325842229|ref|ZP_08167646.1| GTP diphosphokinase [Turicibacter sp. HGF1]
gi|325489696|gb|EGC92055.1| GTP diphosphokinase [Turicibacter sp. HGF1]
Length = 730
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 303/522 (58%), Gaps = 64/522 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
+P+ + ++ +A LA++ H Q R+SGEP+IIHP+EVA IL + + +IA+GLLHD +
Sbjct: 24 NPDSIAIIEKAFELAYQQHKTQLRKSGEPYIIHPIEVAYILAKWQTGPRTIASGLLHDII 83
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLG---KLKCKNENHSVQDVKADDLRQMFL 258
EDT++ T E I E F + IV+G TK++KL K K + ENH R+M L
Sbjct: 84 EDTDI-TKEEIAELFDDEIANIVDGVTKLTKLSYKSKEKQQAENH----------RKMLL 132
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHN+RTL + P KQ +IA ET++++ P+A LGMY++K+ELE+
Sbjct: 133 AMSKDIRVILVKLADRLHNIRTLKFLAPEKQCAIAHETMEIYVPIAHRLGMYRVKAELED 192
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSV 376
S + ED+ ++ + + K+HE+E + +K++ED+ L + EI+
Sbjct: 193 TSLRFLKPEDFYRIAQLIKQ--KKHEREAQ------IKEMEDEIKSALSEYQINFEIKGR 244
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YS+YK ++ E+ + LR+I+ P CY LG++H +
Sbjct: 245 IKNIYSVYKKMMTREKDFEEIYDLLALRLIVNSVPE------------CYSALGIIHAHF 292
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
PIP KDYIA PKPN YQSLHTT+I P + ++F EVQIRT+EMD IAE+G+AAH++
Sbjct: 293 KPIPNRFKDYIAMPKPNMYQSLHTTIIGP--HGNVF--EVQIRTKEMDDIAEQGVAAHWA 348
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
+ R T I ++ W + +QEE + + +
Sbjct: 349 ---------------YKENRQITPKQEQKEIQDKLKWYETLIAYQEEV---NDAEKLMKL 390
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D+ + V+VF+P G++ + P G+T +D+AY IHT++G+K A VNG +V+ + +
Sbjct: 391 VKDDIFNANVYVFSPNGDVFDFPPGSTPLDFAYRIHTDLGHKTTGAIVNGKIVTLNYQMK 450
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
++VEI SS+++F + WL +T ARHKI ++
Sbjct: 451 TGDIVEI-----KSSRNSFGPSEDWLNIVQTSQARHKIRQYF 487
>gi|342213759|ref|ZP_08706478.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
gi|341597347|gb|EGS39906.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
Length = 741
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 296/522 (56%), Gaps = 57/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYL + ++ RA LA +AH QKR SGEP+I+HP+ VA IL EL++D ++ + LLH
Sbjct: 28 SYLPEEDWPVIERAFALADKAHAPQKRASGEPYILHPLGVATILSELQIDRSTLVSALLH 87
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + + E IEE+FG V +V+G TK+++ + + K E + ++ R+M L
Sbjct: 88 DVVEDTEI-SLEEIEEQFGPEVAFLVDGVTKLNQF-QYQTKEEQ------QIENYRKMIL 139
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++VRV+++KL DRLHNMRTL HM P KQ IA ETL++FAPLA LG++ IK ELE+
Sbjct: 140 AMAKDVRVVVIKLGDRLHNMRTLKHMRPDKQQRIAQETLEIFAPLAHRLGIFNIKWELED 199
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y E Y + +++++ + E + + L +E +K +++ K
Sbjct: 200 LSFRYLEPEKYYDLVQQMSEKRQAREDIVNDTMNTLKDALEHAH------IKADVKGRPK 253
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + K ++++ + +R+I+ P CY VLG VH +W P
Sbjct: 254 HFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD------------CYAVLGTVHSLWKP 301
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT+I + +E+QIRT +M ++E G+AAH+
Sbjct: 302 LPYRFKDYIAMPKSNMYQSLHTTVIGTKGQP---VEIQIRTWDMHRVSEYGVAAHWR--- 355
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ G G A A+ ++ W+ + EWQ+ +E ++ +
Sbjct: 356 YKEGNKGKA---------------EADFDAKVGWIRHVLEWQDA----SDPKELLNALKL 396
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTP+G++ LPKG +D+AY +HT++GNK V AK+NG +V + L N +
Sbjct: 397 DVFTGEVFVFTPKGDVMKLPKGTVPLDFAYRVHTDVGNKCVGAKINGKIVPLDYELQNGD 456
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK+ R WL + ++ KI + + +
Sbjct: 457 IVEIVT-----SKNGKPR-LDWLNIVGSTESKTKIRNWFKRE 492
>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
Length = 779
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/512 (40%), Positives = 289/512 (56%), Gaps = 56/512 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A+ H+GQ R SGEP+I HPV VA +L +L I AG LHD VEDT V
Sbjct: 59 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEV- 117
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E IEE FGA VR++VEG TK+SK K E +A++ R+MFLAM +++RVI
Sbjct: 118 TPEEIEERFGAEVRQLVEGVTKLSKF-NFSSKTEQ------QAENFRRMFLAMAQDIRVI 170
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL H+ KQ IA ET+ +FAPLA LG+ ++K ELE+LSF Y +AE
Sbjct: 171 LVKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAE 230
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y ++ VA+ + E LE++ +IL D+ + ++ K YSIY+ +
Sbjct: 231 QYRSIQGHVAEKRADREARLEQSVQILR-----DRLSQIGIEPVDVSGRPKHLYSIYRKM 285
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ +E+ +A LRII+ + CY L +VH + PIP KDYI
Sbjct: 286 QMQQKEFHEIFDVAALRIIV------------NSNDECYRALAVVHDAFRPIPGRFKDYI 333
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHTT+I S LE+QIRT EM IAE GIAAH+
Sbjct: 334 GLPKPNRYQSLHTTVIGL---SGRPLEIQIRTLEMHRIAEYGIAAHWK-----------Y 379
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
+ +G S GK + + +WL + EWQ + ++E+++ I +L V+V
Sbjct: 380 KESGGSA-GKFSTEDE-----KFTWLRQLLEWQHDL---KDAKEYLENIKDNLFDEDVYV 430
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY-N 626
FTP G++ L + +T VD+AY IHTE+GN+ AKVNG +V L N ++VEI+T N
Sbjct: 431 FTPGGDVIALAQRSTPVDFAYRIHTEVGNRCAGAKVNGRIVPLETRLNNGDIVEILTQKN 490
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
A S WL T +A+++I ++ +
Sbjct: 491 ARPSLD-------WLNFVVTSAAKNRIRQWYK 515
>gi|392957304|ref|ZP_10322828.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
gi|391876711|gb|EIT85307.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
Length = 726
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 305/529 (57%), Gaps = 55/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L+ SYL+ ++E + A A +AH+GQ R+SGEP+I HP+EVA IL L++D +
Sbjct: 5 EVLQNARSYLAEEDIEFLNDAYEYAKDAHEGQFRKSGEPYIQHPIEVAGILVGLQMDPVT 64
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+AAG LHD VEDT + T + I + F V +V+G TK+ K+ + + +A+
Sbjct: 65 VAAGFLHDVVEDTPI-TLKDISDRFNEEVAMLVDGVTKLKKIKFKSKEEQ-------QAE 116
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+MF+AM +++R I++KLADRLHNMRTL HM KQ A ETL++FAPLA LG+
Sbjct: 117 NHRKMFVAMAQDIRCILIKLADRLHNMRTLKHMTKEKQIQKANETLEIFAPLAHRLGIST 176
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE++S Y N + Y R+ +L K+ E E+ + +M +IE+ L + +K
Sbjct: 177 IKWELEDVSLRYLNPQQYY----RIVNLMKQKRAEREQYVQEVMNEIENR--LTEVQIKA 230
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K NE+ + +R+I+ + CY LG+
Sbjct: 231 DISGRPKHIYSIYRKMVKQNKQFNEIYDLLAVRVIV------------HNIKDCYAALGI 278
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H W P+P KDYIA PK N YQSLHTT+I + LEVQIRT +M +AE GIA
Sbjct: 279 IHTAWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDP---LEVQIRTGDMHRVAEYGIA 335
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + + + + N ++SW I EWQ + + E
Sbjct: 336 AHWAYK-------------EEAKKAPSDTFEN-----KLSWFREILEWQNDVAD---AEE 374
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL VFVFTP+G++ LP G+ +D+AY IHTEIGN+ + AKVNG +V+
Sbjct: 375 FMESLKVDLFSDMVFVFTPKGDVIELPAGSVPLDFAYRIHTEIGNRCIGAKVNGKMVTLD 434
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L +++EI+T SK ++ + WL+ ++ A++KI +F + +
Sbjct: 435 YKLKTGDIIEIMT-----SKHSYGPSQDWLKITQSSHAKNKIRQFFKRE 478
>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
Length = 764
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/512 (40%), Positives = 289/512 (56%), Gaps = 56/512 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A+ H+GQ R SGEP+I HPV VA +L +L I AG LHD VEDT V
Sbjct: 44 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEV- 102
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E IEE FGA VR++VEG TK+SK K E +A++ R+MFLAM +++RVI
Sbjct: 103 TPEEIEERFGAEVRQLVEGVTKLSKF-NFSSKTEQ------QAENFRRMFLAMAQDIRVI 155
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL H+ KQ IA ET+ +FAPLA LG+ ++K ELE+LSF Y +AE
Sbjct: 156 LVKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAE 215
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y ++ VA+ + E LE++ +IL D+ + ++ K YSIY+ +
Sbjct: 216 QYRSIQGHVAEKRADREARLEQSVQILR-----DRLSQIGIEPVDVSGRPKHLYSIYRKM 270
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ +E+ +A LRII+ + CY L +VH + PIP KDYI
Sbjct: 271 QMQQKEFHEIFDVAALRIIV------------NSNDECYRALAVVHDAFRPIPGRFKDYI 318
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHTT+I S LE+QIRT EM IAE GIAAH+
Sbjct: 319 GLPKPNRYQSLHTTVIGL---SGRPLEIQIRTLEMHRIAEYGIAAHWK-----------Y 364
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
+ +G S GK + + +WL + EWQ + ++E+++ I +L V+V
Sbjct: 365 KESGGSA-GKFSTEDE-----KFTWLRQLLEWQHDL---KDAKEYLENIKDNLFDEDVYV 415
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY-N 626
FTP G++ L + +T VD+AY IHTE+GN+ AKVNG +V L N ++VEI+T N
Sbjct: 416 FTPGGDVIALAQRSTPVDFAYRIHTEVGNRCAGAKVNGRIVPLETRLNNGDIVEILTQKN 475
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
A S WL T +A+++I ++ +
Sbjct: 476 ARPSLD-------WLNFVVTSAAKNRIRQWYK 500
>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
Length = 763
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 197/513 (38%), Positives = 292/513 (56%), Gaps = 53/513 (10%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
+L+ RA A++ H GQ R+SGEP+I HPV VA +L +L IAAG LHD VEDT+V
Sbjct: 43 QLICRAFNFAYQLHQGQYRKSGEPYICHPVAVAGLLRDLGGGSAMIAAGFLHDVVEDTDV 102
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGK-LKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T E IE++FGA V+ +VEG TK+SK + K E +A++ R+MFLAM +++R
Sbjct: 103 -TLEDIEQQFGAEVKHLVEGVTKLSKFSETFSSKTER------QAENFRRMFLAMAQDIR 155
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI+VKLADRLHNMRTL H+P K+ IA ET ++FAPLA LG+ K ELE+L+F Y
Sbjct: 156 VIVVKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLE 215
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
E Y +++ VA+ + E L ++L + + + +I K Y IY+
Sbjct: 216 PEAYRQIQDLVAEKRTDREARLTRVIEVLQQGMAQSHIQCI-----DISGRPKHLYGIYQ 270
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ + + +E+ +A +RII+K + CY L +VH + PIP KD
Sbjct: 271 KMQRQQKEFHEIYDLAAIRIIVKTN------------EECYRALAVVHDAFRPIPGRFKD 318
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YI PKPN YQSLHTT++ F LEVQIRT +M IAE GIAAH+
Sbjct: 319 YIGLPKPNRYQSLHTTVVGFTGRP---LEVQIRTIDMHHIAEYGIAAHWK---------- 365
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
+ G S K ++ + +WL + EWQ + ++E++++I +L V
Sbjct: 366 -YKETGGSSHTKFTPVDE-----KFTWLRQLLEWQNDL---KDAQEYLESIKDNLFEDEV 416
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
+VFTP+G++ L G+T +D+AY IHTE+GN AKVNG +V+ L N ++V+I+T
Sbjct: 417 YVFTPKGDVVPLSPGSTAIDFAYRIHTEVGNHCAGAKVNGRMVTLDTALKNGDIVDILTQ 476
Query: 626 NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+S + WL +T +A+++I ++ +
Sbjct: 477 K--NSHPSL----DWLNFVRTSAAKNRIRQWYK 503
>gi|256847111|ref|ZP_05552557.1| GTP pyrophosphokinase [Lactobacillus coleohominis 101-4-CHN]
gi|256715775|gb|EEU30750.1| GTP pyrophosphokinase [Lactobacillus coleohominis 101-4-CHN]
Length = 745
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 298/528 (56%), Gaps = 53/528 (10%)
Query: 132 EDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
ED++ IS Y++ + L RA A AH Q R+SGEP+IIHP++VA IL EL +D E
Sbjct: 12 EDVKKMISSYMNEEHVALCERAYHFAEVAHHDQVRKSGEPYIIHPIQVAGILAELRMDPE 71
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
++ AG +HD VEDT T + I+E FG T+ IV+G+TK+SK+ K + A
Sbjct: 72 TVCAGYMHDIVEDTGA-TLDDIKEIFGPTIAMIVDGDTKISKIHYKSNKEQ-------MA 123
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
+ R++ LAM++++RV+IVKLADRLHNMRTL+H+ P KQ I+ ETL+++AP+A LG+
Sbjct: 124 ETHRKLLLAMSKDIRVMIVKLADRLHNMRTLNHLRPDKQRRISNETLEIYAPIADRLGIS 183
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
IK ELE+LS Y N + Y ++ + + ++EA K + K D L+L +
Sbjct: 184 TIKWELEDLSLRYLNPQQYYRIVHLMHSRRDQRVAYIDEAIKEVKKATAD---LNLGS-N 239
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
EI K YS+Y+ ++ +E+ + +R+++ + CY VLG
Sbjct: 240 VEIYGRPKHIYSVYRKMVTQHKQFSEIYDLLAVRVVV------------DSIRDCYAVLG 287
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+H WTP+P KDYIA PK NGYQSLHTT+I LE+QIRT M +AE G+
Sbjct: 288 AIHTTWTPMPGRFKDYIAMPKANGYQSLHTTVIG---PEGRPLEIQIRTHHMHEVAEFGV 344
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH++ + GKT + L LN ++E E + +
Sbjct: 345 AAHWAYK-----------------EGKT---DGVQATLDSRKLNVVKEILEMRSESHGTD 384
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF+ + D+ +V+ FTP+G++ +PKGA +D AY IHTE+GN AKVNG +V
Sbjct: 385 EFMQGVQSDVFTDKVYAFTPKGDVIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPL 444
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + N ++V+I+T S S+ + W++ TR AR+KI +F R
Sbjct: 445 DYEIKNGDIVDILT-----STSSAGPSRDWVDLVSTRRARNKIRQFFR 487
>gi|289550601|ref|YP_003471505.1| GTP pyrophosphokinase [Staphylococcus lugdunensis HKU09-01]
gi|385784229|ref|YP_005760402.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
gi|418413905|ref|ZP_12987121.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180133|gb|ADC87378.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
lugdunensis HKU09-01]
gi|339894485|emb|CCB53764.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
gi|410877543|gb|EKS25435.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 729
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 295/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLSP++ + V ++ LA+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++E F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E K + I D + M +K EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +R+I+ + CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AK NG +V +V+ +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|357057600|ref|ZP_09118458.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
gi|355374848|gb|EHG22139.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
Length = 743
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 343/633 (54%), Gaps = 77/633 (12%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY + +L +R+A A +AH GQ R SG+ +I+HP+ VA IL L LD E+I A LLH
Sbjct: 20 SYQADADLAKIRKAYDCAEKAHSGQVRISGDAYIVHPLNVAYILTGLHLDDETICAALLH 79
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT T E ++ EFG + +++G V+KLG++ E S +DVK ++ R+MFL
Sbjct: 80 DVVEDT-CATLEEMDAEFGRNIMELIDG---VTKLGRI----EYMSKEDVKLENYRKMFL 131
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M K+ IA ET++V+APLA LG+ IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAKETIEVYAPLANRLGISSIKVELED 191
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y E Y + V +E ++ + E+ + + +K+E ++ EI+ K
Sbjct: 192 LCLRYLEPEAYYALVEEVKHKRQERQEFIRESIRQIREKLE------AAGIEAEIKGRAK 245
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S++E+ ++ +R+++ S + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVSEIYDLSAVRVLV------------SSVKDCYGVLGVIHAMWKP 293
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK NGYQSLHTT++ LE+QIRT+ M ++E G+AAH+ +
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTHGDP----LEIQIRTKAMHQVSEFGVAAHWKYK- 348
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G+++ + N ++SWL + Q+E+ +EF + +
Sbjct: 349 ---------------EAGRSIGATDEN-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG++ V AKVNG +V + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHRCVGAKVNGKIVPLEYKLKNGD 449
Query: 619 VVEIIT-----------YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA---ALS 664
+V I+T N ++S + + + W + + M +R++A +
Sbjct: 450 IVSIVTNKGGGGPSPDWLNTVASSATRSKIRAWFKKENREENVERGMNLIRDEAKRLGYA 509
Query: 665 ASEITADTVGDFVAD----SGEESEVEDLSDGSKQDKPLWEKIL---MNVVQMSSPVRNS 717
E+TA VA+ E+ + L G + + K++ ++ S+P S
Sbjct: 510 PKELTAGGRLGKVAEKLNVQSEDDLLAALGYGGVSLRGVMTKLIELHQQAIKDSTPPEVS 569
Query: 718 KAVCSDDNASLWAPKVNGKHNKRVHYVGSKAEG 750
+ + + L AP+ GK K H V + EG
Sbjct: 570 QML-----SELKAPR-RGKRKKASHGVLVEGEG 596
>gi|46580488|ref|YP_011296.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|387153786|ref|YP_005702722.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris RCH1]
gi|46449907|gb|AAS96556.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|311234230|gb|ADP87084.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris RCH1]
Length = 717
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 309/531 (58%), Gaps = 75/531 (14%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++ L++RA + A H GQ R SGEP++ HP+ VA +L E+ D ++AAGLLHDTVEDT
Sbjct: 19 DISLIQRAYVYAAAGHAGQTRLSGEPYLSHPLAVADLLAEMHFDEATVAAGLLHDTVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ E I+ EFG V IV+G TK+S++ S ++ +A+++R+M LAM+ ++
Sbjct: 79 DA-GIEDIDREFGEEVADIVDGVTKISQM-------TFDSKEEAQAENIRKMILAMSHDI 130
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV++VKLADRLHNMRTL HKQ SIA ETL ++APLA LG+++IK ELE+L YT
Sbjct: 131 RVLMVKLADRLHNMRTLDFQKSHKQQSIAQETLDIYAPLANRLGLHRIKLELEDLGLRYT 190
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKI--LMKKIEDDQFLDLMTVKTEIRSVCKEPYS 382
+ +A++ + E ++ E N I ++ +I + LD ++ E+R K S
Sbjct: 191 KPDVFAQITDWL------DENQMVERNLIDKVIARIR--EVLDANGIEGEVRGRIKHKSS 242
Query: 383 IYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRA 442
IYK + + +++E++ I R+I+ + + CY VLGL+H W P+
Sbjct: 243 IYKKMTQQGLALDEMHDIIAFRVIV------------ADLRDCYAVLGLMHAQWKPVHGR 290
Query: 443 MKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRV 498
KDYI+ PK NGYQSLHTT+I E R+E+QIRT EM +AE G+A+H+ +GRV
Sbjct: 291 FKDYISMPKANGYQSLHTTVIGPEGE---RIEIQIRTREMHRMAEHGVASHWLYKDAGRV 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+PR ++A + +WL I + Q+ S+EF+ ++
Sbjct: 348 --------------NPR---------DVA-QFTWLREILDRQKH---EADSKEFMHSLRL 380
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTPRG++K LP+GAT +D+AY+IH+++G+ AKVNG LV L + +
Sbjct: 381 DLFKDEVYVFTPRGDVKELPEGATPIDFAYLIHSQVGDHCAGAKVNGKLVPLGTPLVSGD 440
Query: 619 VVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLR-EQAALSAS 666
+E+IT RH + WL+ KT AR +I F+R E+ A S S
Sbjct: 441 TIEVITDP--------NRHPSRDWLKIVKTAKARSRIQHFIRTEERARSIS 483
>gi|117922244|ref|YP_871436.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
ANA-3]
gi|117614576|gb|ABK50030.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. ANA-3]
Length = 700
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 304/544 (55%), Gaps = 71/544 (13%)
Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L+ + S YL P ++EL+++A +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3 LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
E++ A LLHDT+EDT+V T E + E+FG V +VEG VSKL KLK +++ ++
Sbjct: 63 HETLMAALLHDTIEDTHV-TKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AMT+++RVI++KLADR HNMRTL + P K+ IA ETL+++AP+A LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
++ IK+ELE+L F + Y ++ RV KE K K L++ IE L+
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+K +++ K YSIY + EV I R+I+ CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
VLG +HG++ P P KDYIA PK NGYQSLHT+L +P +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
MD +A++G+AAH+ A G +G T + W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHW------------AYKGGADGQGTTTQVRAR------KWMQSLLELQQ 368
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
TS EFV+ + +L ++VFTP G I LP AT VD+AY +HT++GN V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VN + L + + VEIIT +A WL T AR KI + L+
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIITAKGARPNAA------WLNFVVTGKARAKIRQVLKSLK 479
Query: 662 ALSA 665
A A
Sbjct: 480 ADDA 483
>gi|228475223|ref|ZP_04059949.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
gi|314936253|ref|ZP_07843600.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
gi|418618568|ref|ZP_13181433.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
gi|228270834|gb|EEK12236.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
gi|313654872|gb|EFS18617.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
gi|374827328|gb|EHR91191.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
Length = 729
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 303/518 (58%), Gaps = 54/518 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS ++ + V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 11 EVLNKAKSYLSADDYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++ F + RIV+G TK+ K+ K + K E +A+
Sbjct: 71 IVAGFLHDVIEDTPY-TFEDVKNMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL M KQ I+ ETL+++APLA LG+
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIYAPLAHRLGINT 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+++ Y ++ Y R+ +L K+ E E + M KI+ + ++ M ++
Sbjct: 183 IKWELEDIALRYIDSVQYF----RIVNLMKKKRSEREAYIQNAMDKIQTE--MNKMNIQG 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 237 EISGRPKHIYSIYRKMVKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+A
Sbjct: 285 VHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTFEMHEIAEHGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GKT+ + +++WL +E E + ++E
Sbjct: 342 AHWAYK-----------------EGKTINSKTQDFQNKLNWL---KELAETDHTSSDAQE 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 382 FMESLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSA 649
++L +++EI T SK ++ + WL+ K+ A
Sbjct: 442 YILKTGDIIEIRT-----SKHSYGPSRDWLKIVKSSGA 474
>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
Length = 758
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 300/547 (54%), Gaps = 57/547 (10%)
Query: 113 LSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFI 172
+ P+V D +E R D P + S ++ L+ RA A + H+GQ R+SGEP+I
Sbjct: 12 IDPAVVPDWLQECLNTRSQPDGGPNPNCSSTDD-SLICRAFEFARDLHEGQYRKSGEPYI 70
Query: 173 IHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK 232
HPV VA IL + + IAAG LHD VEDT++ T E IE+ FGA VR++VEG TK+SK
Sbjct: 71 CHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTDI-TLEEIEQRFGAEVRQLVEGVTKLSK 129
Query: 233 LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSI 292
K E A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ KQ SI
Sbjct: 130 F-NFSSKTER------LAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLSEEKQRSI 182
Query: 293 ATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANK 352
A ET +FAPLA LG+ + K ELE+L+F Y E Y +++ VA+ + E +L E
Sbjct: 183 ALETRDIFAPLANRLGIGRFKWELEDLAFKYLEPEAYREIQELVAEKRADRETQLAEVTD 242
Query: 353 ILMKKIEDDQFLDLMTVKT-EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKP 411
L ++ LD + +K E+ K Y IY + + + N+V IA +RII++
Sbjct: 243 CLRER------LDNLGIKCYEVSGRPKHLYGIYGKMQRRQKGFNQVYDIAAVRIIVESN- 295
Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMF 471
CY L +VH + PIP KDYI PK N YQSLHT +I S
Sbjct: 296 -----------DDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIG---TSGR 341
Query: 472 RLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRIS 531
+EVQIRT M IAE GIAAH+ + G S TV ++ + +
Sbjct: 342 PIEVQIRTVAMHHIAEYGIAAHWK-----------YKETGGS--NTTVTGDDE----KFT 384
Query: 532 WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIH 591
WL + EWQ + RE++ +I +L ++VFTP G++ L G+T VD+AY IH
Sbjct: 385 WLRQLLEWQSDL---KDDREYLQSIKDNLFDEDIYVFTPNGDVIALNSGSTPVDFAYRIH 441
Query: 592 TEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARH 651
TEIGN+ A+VNG +V+ VL N ++VEI+T S WL KT A++
Sbjct: 442 TEIGNRCTGARVNGRMVTLDKVLKNGDIVEILTQKNGHPSS------DWLNFVKTNGAKN 495
Query: 652 KIMKFLR 658
+I ++L+
Sbjct: 496 RIRQWLK 502
>gi|302342677|ref|YP_003807206.1| (p)ppGpp synthetase I SpoT/RelA [Desulfarculus baarsii DSM 2075]
gi|301639290|gb|ADK84612.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfarculus baarsii DSM 2075]
Length = 726
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 303/554 (54%), Gaps = 53/554 (9%)
Query: 128 ERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
+R+ E + + Y +++ + +A + + + H GQ+R SGEP++ HP+ VA +L E++L
Sbjct: 2 KRINEIIDTVLGYHPGADVKAIMKAYVYSAKVHAGQRRSSGEPYLSHPLAVAALLSEMQL 61
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D SI AGLLHDTVEDT T I GA V +V+G TK++ L + S
Sbjct: 62 DVASICAGLLHDTVEDTEA-TLADITALLGAEVASLVDGVTKITLLAAPAQAQPDASA-- 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
++A +LR+M LAM ++RV+++KLADRLHNMRTL ++ P KQ IA ET ++AP+A L
Sbjct: 119 MQAQNLRKMILAMANDIRVLLIKLADRLHNMRTLGYLKPEKQRRIAQETRDIYAPMAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ + + ELE+L+F Y + E Y ++K VA E + E IL KK+++
Sbjct: 179 GIRRWQIELEDLAFYYLDPEIYQRIKEEVAQSQAERNSFINEVIAILQKKMQE------A 232
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ + K SIY + + I+E+ + R++ VG + CY
Sbjct: 233 GISCSVYGRPKHFASIYGKMQRRNVDISELYDLLAFRVL--------VGSIKD----CYE 280
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG+VH IW P+P +DYI PK N YQSLHT ++ + + R+EVQIRTEEM IAE
Sbjct: 281 ALGVVHTIWKPVPGRFRDYIGMPKANMYQSLHTAVVGPMGQ---RMEVQIRTEEMHRIAE 337
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
GIAAH+ + G G R R +WL + EWQ+E
Sbjct: 338 EGIAAHWRYKEQEAGDDGEQR--------------------RFAWLRRLLEWQQEL---D 374
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
EF++++ DL +FVFTP GE+K LPKGAT VD+AY IHT++G++ V AK++G +
Sbjct: 375 EPGEFMNSLRMDLYPEEIFVFTPTGEVKELPKGATPVDFAYAIHTQVGDRCVGAKIDGRM 434
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
L + VEIIT NA + S K WL KT AR KI ++R+Q + A
Sbjct: 435 APLRTELKTGDQVEIIT-NAKHTPS-----KDWLAFVKTNRARSKIRAYVRKQESERAVA 488
Query: 668 ITADTVGDFVADSG 681
+ D + + SG
Sbjct: 489 LGRDLLERELRKSG 502
>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
Length = 756
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 298/537 (55%), Gaps = 57/537 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ A A+ H GQ R+SGEP+I HPV VA +L +L IAAG LHD VEDT+V
Sbjct: 43 LIGEAFKFAYRLHQGQYRKSGEPYICHPVAVAGLLRDLGGSAAMIAAGFLHDVVEDTDV- 101
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E+I E FG VR++VEG TK+SK+ K K E+ +A++ R+MFL+M +++RVI
Sbjct: 102 TIEQIGELFGPEVRQLVEGVTKLSKI-NFKSKTES------QAENFRRMFLSMAQDIRVI 154
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL MP K+ IA ET +FAPLA LG++ K ELE+LSF Y E
Sbjct: 155 VVKLADRLHNMRTLQVMPDDKRRRIAQETRDIFAPLANRLGIWHFKWELEDLSFKYLEPE 214
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+ ++++ VA+ E++L A IL ++++ L ++ K YSIY+ +
Sbjct: 215 SFREIQQHVAEKRTSREEKLARATTILQERLKQAGIECL-----DVSGRPKHLYSIYQKM 269
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ + +E+ +A LRII++ + CY L +VH + PIP KDYI
Sbjct: 270 QRQQKEFHEIYDLAALRIIVRTN------------EECYRALAVVHDAFRPIPGRFKDYI 317
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHT +I LEVQIRT+EM IAE GIAAH+ +
Sbjct: 318 GLPKPNRYQSLHTGVIGLTGRP---LEVQIRTQEMHHIAEYGIAAHWKYK---------- 364
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
G + N + +WL + EWQ + ++E++D++ +L V+V
Sbjct: 365 ------ETGGSNVSNLTTSDEKFTWLRQLLEWQSDL---KDAQEYLDSVKDNLFEDDVYV 415
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNA 627
FTP+G++ L GAT +D+AY IHTE+GN A+VNG +V + L N ++V I+T
Sbjct: 416 FTPKGDVVPLSPGATTIDFAYRIHTEVGNHCAGARVNGRMVPLSTRLQNGDIVVIMTQK- 474
Query: 628 LSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVADS 680
+S + WL +T +A+++I ++ RE+ E+ +G DS
Sbjct: 475 -NSHPSL----DWLNFVRTSAAKYRIKQWYKRSRREENVARGRELLEKELGKTGFDS 526
>gi|293375177|ref|ZP_06621464.1| putative GTP diphosphokinase [Turicibacter sanguinis PC909]
gi|292646214|gb|EFF64237.1| putative GTP diphosphokinase [Turicibacter sanguinis PC909]
Length = 730
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 302/522 (57%), Gaps = 64/522 (12%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
+P+ + ++ +A LA++ H Q R+SGEP+IIHP+EVA IL + + +IA+GLLHD +
Sbjct: 24 NPDSIAIIEKAFELAYQQHKTQLRKSGEPYIIHPIEVAYILAKWQTGPRTIASGLLHDII 83
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLG---KLKCKNENHSVQDVKADDLRQMFL 258
EDT++ T E I E F + IV+G TK++KL K K + ENH R+M L
Sbjct: 84 EDTDI-TKEEIAELFDDEIANIVDGVTKLTKLSYKSKEKQQAENH----------RKMLL 132
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHN+RTL + P KQ +IA ET++++ P+A LGMY++K+ELE+
Sbjct: 133 AMSKDIRVILVKLADRLHNIRTLKFLAPEKQCAIAHETMEIYVPIAHRLGMYRVKAELED 192
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSV 376
S + ED+ ++ + + K+HE+E + +K++ED+ L + EI+
Sbjct: 193 TSLRFLKPEDFYRIAQLIKQ--KKHEREAQ------IKEMEDEIKSALSEYQINFEIKGR 244
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YS+YK ++ E+ + LR+I+ P CY LG++H +
Sbjct: 245 IKNIYSVYKKMMTREKDFEEIYDLLALRLIVNSVPE------------CYSALGIIHAHF 292
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
PIP KDYIA PKPN YQSLHTT+I P + ++F EVQIRT+EMD IAE+G+AAH++
Sbjct: 293 KPIPNRFKDYIAMPKPNMYQSLHTTIIGP--HGNVF--EVQIRTKEMDDIAEQGVAAHWA 348
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
+ R T I ++ W + +QEE + + +
Sbjct: 349 ---------------YKENRQITPKQEQKEIQDKLKWYETLIAYQEEV---NDAEKLMKL 390
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D+ + V+VF+P G++ + P G+T +D+AY IHT +G+K A VNG +V+ + +
Sbjct: 391 VKDDIFNANVYVFSPNGDVFDFPPGSTPLDFAYRIHTNLGHKTTGAIVNGKIVTLNYQMK 450
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
++VEI SS+++F + WL +T ARHKI ++
Sbjct: 451 TGDIVEI-----KSSRNSFGPSEDWLNIVQTSQARHKIRQYF 487
>gi|224476731|ref|YP_002634337.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421338|emb|CAL28152.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 729
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 197/503 (39%), Positives = 295/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSEEEYEHVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++ F V IVEG TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTPY-TFDDVKAMFNDEVAMIVEGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++ Y + Y R+ +L K+ E E + +I + +D M + EI K
Sbjct: 190 IALRYIDGVQYF----RIVNLMKKKRSEREAYIANAIDRISAE--MDKMHISGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY VLGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAVRIIV------------DSIKDCYAVLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT+EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTQEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK V +N+ A ++SWL + E + N ++EF++++
Sbjct: 348 ----------------EGKKVTDDNSGYAQKLSWLKDLAEADK--TAN-DAQEFMESLKF 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP+ ++ LP GA +D+AY +H+E+GNKM+ AKVNG + +VL +
Sbjct: 389 DLQSDKVYAFTPQSDVIELPYGAVPIDFAYAVHSEVGNKMIGAKVNGKIEPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
+VEI T SK ++ + WL
Sbjct: 449 IVEIRT-----SKHSYGPSRDWL 466
>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
Length = 758
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 308/579 (53%), Gaps = 77/579 (13%)
Query: 102 LHVACKRWRLCLSPSVSSDAFKEDSPERLWEDLRPTISYLSPNELELVR----RALMLAF 157
+H+ + P D + W S +P + L R RA A+
Sbjct: 9 MHLVSAEFETLQLPDWLKDCLDHPHGTQEWTTANSETSLTTPRTVSLDRGLIARAFDFAY 68
Query: 158 EAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFG 217
H GQ R SGEP+I+HPV+VA +L EL D +AAG LHD +EDT T E +E+ FG
Sbjct: 69 RLHTGQNRASGEPYILHPVQVAGMLRELGSDSAMVAAGFLHDIIEDT-ATTSEDLEQLFG 127
Query: 218 ATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHN 277
VR +VEG TK+SK K E +A++ R+MFLAM +++RVI+VKLADRLHN
Sbjct: 128 EQVRLLVEGVTKLSKF-TFDSKEER------QAENFRRMFLAMAQDIRVIVVKLADRLHN 180
Query: 278 MRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 337
MRTL +P HKQ IA ET+ +FAPLA LG+++ K ELE+L+F Y + + Y +++ V+
Sbjct: 181 MRTLDFLPTHKQRRIAQETMDIFAPLANRLGIWRFKWELEDLAFKYLDPDAYRHMQKLVS 240
Query: 338 DLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEV 397
E E+ +++ + + +I D + EI K + IY+ + + + +E+
Sbjct: 241 QKRAEREQFIDQVVQTIRAEI------DRQHIHGEITGRPKHLWGIYQKMQRQQKEFHEI 294
Query: 398 NQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQS 457
++ +RII++ Q+ CY L +VH + PIP KDYI PKPN YQS
Sbjct: 295 YDVSAVRIIVE------------QQEECYRALSIVHNKFRPIPGRFKDYIGLPKPNRYQS 342
Query: 458 LHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHY----SGRVFVTGLVGHARPNGRS 513
LHT ++ + LEVQIRT +M IAE GIAAH+ +G V V
Sbjct: 343 LHTAVVGPEGKP---LEVQIRTVDMHRIAEYGIAAHWKYKEAGSVVV------------- 386
Query: 514 PRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGE 573
A+ + +WL + +WQ + + E+++TI DL S V+VFTP+G+
Sbjct: 387 ----------ASQEEKFTWLRQLLDWQSDL---KDAGEYLETIKEDLFYSEVYVFTPKGD 433
Query: 574 IKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT--------- 624
+ LP+G T VD+AY IHTE+GN+ V AKVN +V L N ++VEI+T
Sbjct: 434 VVELPRGGTPVDFAYRIHTEVGNRCVGAKVNDRMVPLDSQLKNGDIVEILTSKNSHPSLD 493
Query: 625 -YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAA 662
N + + SA R +QW + RS R + ++ R+ A
Sbjct: 494 WINFVVTSSAKNRIRQWFK----RSTREQNIEQGRDMLA 528
>gi|406962538|gb|EKD88859.1| hypothetical protein ACD_34C00295G0001, partial [uncultured
bacterium]
Length = 691
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 298/543 (54%), Gaps = 80/543 (14%)
Query: 147 ELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNV 206
E++ A A AH+GQKR SGEP+I H V VA IL E+++ ++A LLHDTVEDT +
Sbjct: 28 EMITHAYKYAETAHEGQKRASGEPYITHCVAVAIILAEMQVQPIVVSAALLHDTVEDTKI 87
Query: 207 VTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHS------VQDVKADD-------- 252
T + I +EFG + +V+G TK++ L ++ +++ + +D +ADD
Sbjct: 88 -TLDDIRKEFGTEIGGLVDGVTKLTHLPRVSRADQHDAEIFEQITKDSEADDSLLDSQLA 146
Query: 253 -----------LRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFA 301
LR+ FLAM E++RVI++KLADRLHNMRTL MP K+ IA ETL +FA
Sbjct: 147 RDRRRDLANETLRKTFLAMGEDIRVILIKLADRLHNMRTLGFMPEKKRKRIAQETLDIFA 206
Query: 302 PLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 361
PLA LG++Q+K ELE+L F YTN E Y ++ + +++ E +++++ + L K + D
Sbjct: 207 PLANRLGIWQLKWELEDLGFRYTNPEKYKEIAQNLSETRLERDRQMQAISDKLEKLLSD- 265
Query: 362 QFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
VK +I + K +SIYK + + V + +R+I+ P
Sbjct: 266 -----AGVKVDISARSKHIFSIYKKMQEKNKPFELVRDLRGVRLIVPDIPS--------- 311
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
CY LGL+H W PIP DYIA PK N YQSLHT + LY+ LEVQIRT E
Sbjct: 312 ---CYSALGLIHTNWRPIPNEFDDYIAGPKDNFYQSLHTAI---LYDDGKPLEVQIRTPE 365
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
MD AE GIAAH+ + K ++ RI+WL + EW++
Sbjct: 366 MDENAEFGIAAHW--------------------KYKEKGPHDEKYEQRINWLKKLMEWRQ 405
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
+ + EFVD + D+ RV+VFTPRG+I +LP G+T +D+AY +HTEIGN+ A
Sbjct: 406 DV---EDANEFVDGMKTDVFQDRVYVFTPRGDIIDLPSGSTPIDFAYHVHTEIGNRCRGA 462
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFL 657
K+NG LV+ + L + VEI L++K + WL KT+ AR KI +
Sbjct: 463 KINGKLVNLEYTLKTGDQVEI-----LAAKQGGP-SRDWLNVNLGLVKTQRARSKIRAWF 516
Query: 658 REQ 660
+ Q
Sbjct: 517 KHQ 519
>gi|427405631|ref|ZP_18895836.1| RelA/SpoT family protein [Selenomonas sp. F0473]
gi|425708472|gb|EKU71511.1| RelA/SpoT family protein [Selenomonas sp. F0473]
Length = 742
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 299/522 (57%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY + +++ + RA A +AH GQ R SGE +IIHP+ VA IL L +D E+I A LLH
Sbjct: 20 SYQADADVDKIERAYRFAEKAHRGQARISGEAYIIHPLNVAYILTGLHMDDETICAALLH 79
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+ T E +EE FG + +++G V+KLG+++ S +DV+ ++ R+MFL
Sbjct: 80 DVVEDTHA-TIEEMEELFGKNIAALIDG---VTKLGRIQYM----SKEDVQLENYRKMFL 131
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL +M K+ IA ETL+V+APLA LG+ IK ELE+
Sbjct: 132 AMAKDIRVIMIKLADRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELED 191
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L Y E Y + V +E ++ + ++ + + +K+ED ++ EI+ K
Sbjct: 192 LCLRYLEPEAYYTLVEEVKHKRQERQEFILDSIRQIKEKLED------AGIEAEIKGRAK 245
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + S+NE+ ++ +R+ L S + CY VLG++H +W P
Sbjct: 246 HFYSIYRKMKRDNKSVNEIYDLSAVRV------------LVSSVKDCYGVLGVIHAMWKP 293
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PK NGYQSLHTT++ LE+QIRT M I+E G+AAH+ +
Sbjct: 294 IPGRFKDYIAMPKSNGYQSLHTTVMTHGDP----LEIQIRTHAMHRISEFGVAAHWKYK- 348
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GK+ + + ++SWL + Q+E+ +EF + +
Sbjct: 349 ---------------EAGKSTGATDES-DQKMSWLRQMVSLQKEY---DDPKEFFEALKL 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ VFVFTPRG++ +LPKG+ +D+AY IHTEIG+ V AKVNG +V + L N +
Sbjct: 390 DVFSDEVFVFTPRGDVIDLPKGSNPIDFAYHIHTEIGHHCVGAKVNGKIVPLEYKLKNGD 449
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+V I+T A S WL + + R KI + +++
Sbjct: 450 IVSIVTNKASGGPSP-----DWLNTVASSATRGKIRAWFKKE 486
>gi|114045839|ref|YP_736389.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
MR-7]
gi|113887281|gb|ABI41332.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-7]
Length = 700
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 303/544 (55%), Gaps = 71/544 (13%)
Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L+ + S YL P ++EL+++A +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3 LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
E++ A LLHDT+EDT VT E + E+FG V +VEG VSKL KLK +++ ++
Sbjct: 63 HETLMAALLHDTIEDT-YVTKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AMT+++RVI++KLADR HNMRTL + P K+ IA ETL+++AP+A LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
++ IK+ELE+L F + Y ++ RV KE K K L++ IE L+
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+K +++ K YSIY + EV I R+I+ CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
VLG +HG++ P P KDYIA PK NGYQSLHT+L +P +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
MD +A++G+AAH+ A G +G T + W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHW------------AYKGGADGQGTTTQVRAR------KWMQSLLELQQ 368
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
TS EFV+ + +L ++VFTP G I LP AT VD+AY +HT++GN V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VN + L + + VEIIT +A WL T AR KI + L+
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIITAKGARPNAA------WLNFVVTGKARAKIRQVLKSLK 479
Query: 662 ALSA 665
A A
Sbjct: 480 ADDA 483
>gi|414160989|ref|ZP_11417252.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876668|gb|EKS24566.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 729
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 200/506 (39%), Positives = 297/506 (58%), Gaps = 58/506 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSKEEYEHVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++ F V IVEG TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTPY-TFDDVKAMFNDEVAMIVEGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEE--ANKILMKKIEDDQFLDLMTVKTEIRSV 376
++ Y + Y R+ +L K+ E E AN I + E +D M + EI
Sbjct: 190 IALRYIDGVQYF----RIVNLMKKKRSEREAYIANAIDNIRAE----MDKMHISGEINGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ ++K + +++ + +RII+ + CY VLGLVH +W
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIV------------DSIKDCYAVLGLVHTLW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++
Sbjct: 290 KPMPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAY 346
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ GK V +N++ A ++SWL + E + N ++EF++++
Sbjct: 347 K-----------------EGKKVTDDNSSYAKKLSWLKDLAEADK--TAN-DAQEFMESL 386
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL +V+ FTP+ ++ LP GA +D+AY +H+E+GNKM+ AKVNG + +VL
Sbjct: 387 KFDLQSDKVYAFTPQSDVIELPYGAVPIDFAYAVHSEVGNKMIGAKVNGKIEPIDYVLQT 446
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLE 642
++VEI T SK ++ + WL+
Sbjct: 447 GDIVEIRT-----SKHSYGPSRDWLK 467
>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 746
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 297/528 (56%), Gaps = 55/528 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ +Y++ + V++AL A H Q R+SGEP+I+HP++VA IL EL++D +
Sbjct: 11 ESIKLVETYMNDEHVAFVKKALDFATYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPAT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+A+G LHD VEDTN+ T I+E FG V IV+G TK+SK+ + K+E A+
Sbjct: 71 VASGFLHDVVEDTNI-TLGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDE-------LAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M LAM +++RV++VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ Q
Sbjct: 123 NHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQ 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
K ELE+ + Y N + Y ++ + + + ++EA K + + D +K
Sbjct: 183 FKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQIKASMTD------FNIKY 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIYK + E+ + +R+I+ + CY VLG
Sbjct: 237 EIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIV------------DTIKDCYAVLGA 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H W P+P KDYIA PK N YQSLHTT+I + LE+QIRTEEM +AE G+A
Sbjct: 285 IHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQP---LEIQIRTEEMHQVAEYGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK + + +I I E +E + +
Sbjct: 342 AHWAYK-----------------EGKRDEVKYDSNGKKIDMFREILELGDE---TTNAAD 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ D+ RV+VFTP+G++ L +G+ +D+AY IHTE+GNK V AKVNG +V
Sbjct: 382 FMESVKGDIFSDRVYVFTPKGDVYELSQGSGPLDFAYTIHTEVGNKTVGAKVNGKIVPLN 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L N ++V+I+T S S+ R W+ T AR+KI +F ++
Sbjct: 442 YQLKNGDIVDILT----SPNSSPSR--DWINLVSTSKARNKIKRFFKQ 483
>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
Length = 760
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 292/531 (54%), Gaps = 57/531 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H Q+R+SGEP+I HPV VA +L +L D IAAG LHD VEDT++
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI- 111
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
+ E+IE FG +VEG TK+SK S + +A++ R+MFLAM +++RVI
Sbjct: 112 SIEQIEALFGEETASLVEGVTKLSKFN-------FSSTTEHQAENFRRMFLAMAKDIRVI 164
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL + P KQ IA ET +FAPLA LG+++ K ELE+LSF Y +
Sbjct: 165 VVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPD 224
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y K++ V + + E LE +L ++ D+ E++ K Y IY +
Sbjct: 225 SYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHF-----ELQGRPKHLYGIYYKM 279
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ E+ IA LRII++ K CY L +VH ++ PIP KDYI
Sbjct: 280 TSQDKAFEEIYDIAALRIIVESKGE------------CYRALSVVHDVFKPIPGRFKDYI 327
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHTT++ LE+QIRTEEM +AE GIAAH+
Sbjct: 328 GLPKPNRYQSLHTTVLGLTSRP---LEIQIRTEEMHHVAEYGIAAHWK-----------Y 373
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
+ +G S + + +WL + +WQ + ++E+V+ + ++L V+V
Sbjct: 374 KESGGSENATLTSTDE-----KFTWLRQLLDWQSDL---KDAQEYVENLKQNLFDDDVYV 425
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNA 627
FTP+GE+ +L +GAT VD+AY IHTE+G+ M A+VNG + L N ++VEI+T
Sbjct: 426 FTPKGEVISLARGATPVDFAYRIHTEVGHHMKGARVNGQWLGVDTRLKNGDIVEIVTQK- 484
Query: 628 LSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
+S + WL T SARH+I ++ R++ L E+ +G
Sbjct: 485 -NSHPSL----DWLNFVVTPSARHRIRQWFKRSRRDENILRGRELLEKELG 530
>gi|139474459|ref|YP_001129175.1| GTP pyrophosphokinase [Streptococcus pyogenes str. Manfredo]
gi|134272706|emb|CAM30978.1| GTP pyrophosphokinase [Streptococcus pyogenes str. Manfredo]
Length = 743
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKTDVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|71904336|ref|YP_281139.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS6180]
gi|71803431|gb|AAX72784.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS6180]
Length = 743
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKTDVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|315658096|ref|ZP_07910968.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
gi|315496425|gb|EFU84748.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
Length = 758
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 295/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLSP++ + V ++ LA+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 47 SYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 106
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++E F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 107 DVIEDT-AYTFDDVKEMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 158
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 159 AIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLGINTIKWELED 218
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E K + I D + M +K EI K
Sbjct: 219 TALRYIDSVQYF----RIVNLMKKKRSEREAYIKNAIDMI--DAEMIKMKIKGEINGRPK 272
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +R+I+ + CY +LGLVH +W P
Sbjct: 273 HIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGLVHTLWKP 320
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 321 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 376
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 377 ----------------EGKTVDEKTQDFQNKLNWL---KELAEADHTSNDAQEFMESLKY 417
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AK NG +V +V+ +
Sbjct: 418 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKANGKIVPIDYVIQTGD 477
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 478 IIEIRT-----SKHSYGPSRDWL 495
>gi|209560112|ref|YP_002286584.1| GTP pyrophosphokinase / Guanosine- 3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Streptococcus pyogenes NZ131]
gi|209541313|gb|ACI61889.1| GTP pyrophosphokinase / Guanosine- 3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Streptococcus pyogenes NZ131]
Length = 739
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 18 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G+TK LGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDEIEADFGQDARDIVDGDTK---LGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 190 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|113971943|ref|YP_735736.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
MR-4]
gi|113886627|gb|ABI40679.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-4]
Length = 700
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 306/544 (56%), Gaps = 71/544 (13%)
Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L+ + S YL P ++EL+++A +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3 LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
E++ A LLHDT+EDT VT E + E+FG V +VEG VSKL KLK +++ ++
Sbjct: 63 HETLMAALLHDTIEDT-YVTKEDLAEQFGEAVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AMT+++RVI++KLADR HNMRTL + P K+ IA ETL+++AP+A LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
++ IK+ELE+L F + Y ++ RV KE K K L++ IE L+
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+K +++ K YSIY + EV I R+I+ CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
VLG +HG++ P P KDYIA PK NGYQSLHT+L +P +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
MD +A++G+AAH++ + P+G +G T + W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHWAYK---------GGPDG---QGTTTQVRAR------KWMQSLLELQQ 368
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
TS EFV+ + +L ++VFTP G I LP AT VD+AY +HT++GN V A
Sbjct: 369 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 425
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQA 661
+VN + L + + VEIIT +A WL T AR KI + L+
Sbjct: 426 RVNRQAYPLSQPLISGQTVEIITAKGARPNAA------WLNFVVTGKARAKIRQVLKSLK 479
Query: 662 ALSA 665
A A
Sbjct: 480 ADDA 483
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 214/548 (39%), Positives = 304/548 (55%), Gaps = 64/548 (11%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E+ L+ RA A+E H GQ R+SGEP+I HP+ VA +L +L D IAAG LHD VEDT
Sbjct: 39 EIGLICRAFNFAYELHKGQYRKSGEPYIAHPIAVAGLLRDLGGDSTMIAAGFLHDVVEDT 98
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
V T E IE+ FG VR++VEG TK+SK K E +A++ R+MFLAM +++
Sbjct: 99 EV-TLEDIEQRFGDEVRQLVEGVTKLSKF-NFSSKTER------QAENFRRMFLAMAKDI 150
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RVI+VKLADRLHNMRTL H+ KQ SIA ET ++FAPLA LG+ + K ELE+L F Y
Sbjct: 151 RVIVVKLADRLHNMRTLEHLATEKQRSIALETREIFAPLANRLGIGRFKWELEDLCFKYL 210
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
E Y +++ VA+ + E +E+ + + + + + EI+ K Y IY
Sbjct: 211 EPEAYREIQALVAEKRIDRETRIEQITETIREGLH-----QIGVNVLEIQGRPKHLYGIY 265
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ + R +E+ IA LRII++ K CY L +VH ++ PIP K
Sbjct: 266 HKMQRQRKEFHEIYDIAALRIIVETK------------DECYRALAIVHDVFKPIPGRFK 313
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI PK N YQSLHTT++ F LEVQIRT EM IAE GIAAH+
Sbjct: 314 DYIGLPKSNRYQSLHTTVVGFTGRP---LEVQIRTLEMHHIAEYGIAAHWK--------- 361
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ G L + + + +WL + EWQ + ++E+++ + +L
Sbjct: 362 ------YKESGGSNYNLTSED--EKFTWLRQLIEWQNDL---KDAQEYIENLKDNLFEDD 410
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGN---LVSPTHVLANAEVVE 621
V+VFTP+G++ L +GAT VD+AY IHTE+G+ M A++NG L +P H N ++VE
Sbjct: 411 VYVFTPQGDVIVLARGATPVDFAYRIHTEVGHHMKGARINGRWSVLDTPLH---NGDIVE 467
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFV 677
IIT SK++ WL T SARH+I ++ RE+ + ++ +G
Sbjct: 468 IIT-----SKNS-HPSLDWLNFVVTPSARHRIRQWFKRSRREENIIRGRDLLEKELGKTG 521
Query: 678 ADSGEESE 685
D+ +SE
Sbjct: 522 FDALLKSE 529
>gi|28896614|ref|NP_802964.1| (p)ppGpp synthetase [Streptococcus pyogenes SSI-1]
gi|28811868|dbj|BAC64797.1| putative (p)ppGpp synthetase [Streptococcus pyogenes SSI-1]
Length = 743
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKTDVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|383480647|ref|YP_005389541.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS15252]
gi|383494629|ref|YP_005412305.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS1882]
gi|378928637|gb|AFC66843.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS15252]
gi|378930356|gb|AFC68773.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS1882]
Length = 739
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 18 TYMTKTDVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 190 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|399923746|ref|ZP_10781104.1| (p)ppGpp synthetase I SpoT/RelA [Peptoniphilus rhinitidis 1-13]
Length = 715
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 299/520 (57%), Gaps = 58/520 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY +++L+ RA +A E H GQKR SGE +IIHP+ V+ IL ++ +D +I AGLLH
Sbjct: 13 SYNENADIDLIMRAYKMAEEHHKGQKRNSGEDYIIHPLNVSLILADMNMDTATIVAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T E ++ EFG + +V+G TK+ KL + ++ +A+++R+M L
Sbjct: 73 DVVEDTDV-TLEDVKNEFGEEIADLVDGVTKLKKLNY-------KNKEEKQAENIRKMVL 124
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVIIVKLADRLHNMRTL +M K+ ATET++++AP+A LGM +IK ELE+
Sbjct: 125 AMAKDIRVIIVKLADRLHNMRTLEYMTDAKKVEKATETVEIYAPIADRLGMSRIKWELED 184
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LS Y + + Y ++ V E E + K+L + LD + +K EI+ K
Sbjct: 185 LSLRYLDEDGYYELVEMVNKRRNEREDLINHIIKVLKEN------LDKVGIKCEIKGRPK 238
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + K +E+ ++ +RI L + + CY LG+VH ++ P
Sbjct: 239 NFYSIYKKMKKKGKVFDEIYDLSAVRI------------LTNSVKDCYGALGVVHTLFKP 286
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYIA PKPN YQSLHTT+I E+ EVQIRT EM AE GIAAH+ +
Sbjct: 287 IPGRFKDYIAMPKPNKYQSLHTTVIDNNGET---FEVQIRTYEMHQTAEYGIAAHWKYKA 343
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
V+ K + ++WL + EWQ++ +F+DT+
Sbjct: 344 GVS---------------KETAFDE-----NLTWLRQLLEWQKDL---NDPGDFMDTLKI 380
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D VFVFTP+G++ NLP+G+T +D+AY IH+++GN V AKVNG +V + L +
Sbjct: 381 DFFADEVFVFTPKGDVINLPEGSTPIDFAYRIHSQVGNTCVGAKVNGRIVPLNYTLQSGN 440
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+VE+IT N +S S WL K+ AR KI ++ +
Sbjct: 441 IVEVIT-NPNTSPSL-----DWLNIVKSPQARKKISQYFK 474
>gi|323340775|ref|ZP_08081027.1| GTP diphosphokinase [Lactobacillus ruminis ATCC 25644]
gi|417974230|ref|ZP_12615052.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 25644]
gi|323091898|gb|EFZ34518.1| GTP diphosphokinase [Lactobacillus ruminis ATCC 25644]
gi|346329455|gb|EGX97752.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 25644]
Length = 739
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 307/542 (56%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + +VR+A A H Q R+SGEP+IIHP++VA IL +L++D E+++AG LHD
Sbjct: 19 YMNEEHVAMVRKACDFASYVHREQFRKSGEPYIIHPIQVAGILADLKMDPETVSAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T + E FG V IV+G V+KL K++ K S Q+ A++ R++ LA
Sbjct: 79 VVEDTPV-TLGDVGELFGKDVEVIVDG---VTKLSKIRYK----SHQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE++
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E + ++EA + + I D + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSKREERVQYIDEAITEIKEAIAD------LHLDCEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY + +++ + +R+++K + CY VLG +H W P+
Sbjct: 245 IYSIYHKMRDLHKQFSQIYDLLAVRVVVKSI------------KDCYAVLGAIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPKGKP---LEVQIRTEEMHRVAEYGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT + +++ I E Q E + ++EF++ + D
Sbjct: 348 ---------------EGKTNGIKQTTTGDKLNLFKEIIEIQNE---SNDAKEFMENVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+VFTP+G++ LPKG+ +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 390 LFSDRVYVFTPKGDVYELPKGSGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQVKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
V+I+T S+++ + WL+ T A++KI +F ++Q + + D + + +
Sbjct: 450 VDILT-----SQNSAGPSRDWLDLVHTNKAKNKIKRFFKQQDRIQNIDRGRDILDQGLIE 504
Query: 680 SG 681
G
Sbjct: 505 GG 506
>gi|334880385|emb|CCB81113.1| GTP pyrophosphokinase [Lactobacillus pentosus MP-10]
gi|339639012|emb|CCC18220.1| GTP pyrophosphokinase [Lactobacillus pentosus IG1]
Length = 755
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 306/541 (56%), Gaps = 57/541 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + LV+RA A H Q R+SGEP+I+HP++VA IL EL++D E++A+G LHD
Sbjct: 19 YMNSDHVALVKRACDFATYVHKDQYRQSGEPYIMHPIQVAGILAELKMDPETVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +EE FG V IV+G V+KLGK++ K+ + A++ R++ LA
Sbjct: 79 VVEDTGV-TLGDVEELFGHDVAVIVDG---VTKLGKIRYKSNKEQL----AENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 131 MSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + ++ EK +E A + + K + DL + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH-----DLELPEAEIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + +++ + +R+++ + CY VLG +H W P+
Sbjct: 246 IYSIYKKMRDKHKQFSQLYDLLAIRVVV------------DSIKDCYAVLGAIHTQWKPM 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LE+QIRT EM +AE G+AAH++ +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVGPEGKP---LEIQIRTFEMHRVAEYGVAAHWAYK-- 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + +++ + I E Q+E + + +F++ + D
Sbjct: 349 ---------------EGKRDEVQETQSGNKLNLVKEIIELQDE---SKDAADFMEGVKGD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+ FTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 391 LFSDRVYAFTPKGDVTELPKGAGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQIKNGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGD 675
V+I+T + + S + W + TR AR+KI +F RE+ +S E+ + D
Sbjct: 451 VDILTSTSSTGPS-----RDWQKLVYTRRARNKIKQFFRNADREENIISGREMLEKQLRD 505
Query: 676 F 676
Sbjct: 506 L 506
>gi|345857932|ref|ZP_08810350.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
gi|344329019|gb|EGW40379.1| relA/SpoT family protein [Desulfosporosinus sp. OT]
Length = 735
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 197/531 (37%), Positives = 307/531 (57%), Gaps = 51/531 (9%)
Query: 131 WEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
+ +LR + P L +V +A A AH Q R SGE +I+HP+EVA+IL ELE+D
Sbjct: 3 FAELRVKLQKTFPQASLAIVDKAYQFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDE 62
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
+IAA LLHD VEDT+ T IE+EFG+ + +V+G V+KLG+L+ K S + +
Sbjct: 63 ATIAAALLHDVVEDTDF-TIVDIEKEFGSEIALLVDG---VTKLGRLEYK----SKMEQQ 114
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
++LR+MFLAM +++RVI++KLADRLHNMRTL + KQ IA ETL++FAPLA LG+
Sbjct: 115 VENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSVQKQKEIAQETLEIFAPLANRLGI 174
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTV 369
++IK ELE+LSF Y ++Y + +A +E E + N+++++ E L+ + +
Sbjct: 175 FRIKWELEDLSFRYLKPQEYYDLVEGIALKRREREAYI---NEVIVQMRER---LNEVEI 228
Query: 370 KTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVL 429
EI K YSIY+ + ++E+ + +R++++ CY L
Sbjct: 229 YAEIAGRPKHFYSIYRKMTTQHKELSEIYDLMAIRVVVE------------SVNDCYGAL 276
Query: 430 GLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERG 489
G++H +W PIP KDYIA PKPN YQSLHTTLI E E+QIRT +M+ +E G
Sbjct: 277 GIIHTMWKPIPGRFKDYIAMPKPNMYQSLHTTLIGVHAEP---FEIQIRTCDMNRTSEYG 333
Query: 490 IAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTS 549
IAAH+ + G G N +++WL + EWQ + + +
Sbjct: 334 IAAHWK-----------YKEGGNKEGGNKAA--EVNFDKKLAWLRQLLEWQHD---SRDA 377
Query: 550 REFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVS 609
EF++++ DL VFVFTP+G++ LP G+ +D+AY +HT++G++ + AK+N +V
Sbjct: 378 GEFMESLKIDLFADTVFVFTPKGDVVELPAGSCPIDFAYRVHTDVGHRCIGAKINARIVP 437
Query: 610 PTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N +++EI+T SK + WL +T A+++I ++ +++
Sbjct: 438 LDTKLNNGDILEILT-----SKQGGGPSRDWLSFVQTSQAKNRIRQWFKKE 483
>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 760
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 296/528 (56%), Gaps = 62/528 (11%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
+ LRP + E +L+RRA ++ H GQKR+SG+P+I HPV VA +L EL D +
Sbjct: 39 DGLRP----YTAEEADLLRRAFEFSYCLHQGQKRKSGDPYIAHPVAVATLLRELGGDAVT 94
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+AAGLLHD +EDT V T E +E EFG+ VR +VEG TK+SK K E +A+
Sbjct: 95 VAAGLLHDVIEDTEV-TPEALEAEFGSEVRLLVEGVTKLSKFN-FSSKTEQ------QAE 146
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+MF+AM +++RVI+VKLADRLHNMRTL ++ P KQ IA ET+++FAPLA LG++
Sbjct: 147 NFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLSPSKQRQIAAETMEIFAPLANRLGIWH 206
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
K ELE+L+F Y + E Y K++ V E E E++ + L + + L
Sbjct: 207 FKWELEDLAFKYLDYEAYRKIQELVNAKRAEREAEIQAFIEELRQNL-----LQAGLEHF 261
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIY+ + + +E+ ++ +R+I+ CY VL +
Sbjct: 262 EISGRPKHLYSIYRKMQQQHKEFHEIYDLSAVRVIVHTN------------SECYRVLAV 309
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH + PIP KDYI PK N YQSLHT +I + EVQIRTEEM +AE GIA
Sbjct: 310 VHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPV---EVQIRTEEMHRVAEYGIA 366
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH+ + G T + R +WL + EWQ + + +E
Sbjct: 367 AHWKYK----------------EAGSTTVKPDEE---RFTWLRQLLEWQNDLKDD---KE 404
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
++DT+ +L S V+VFTP+G++ LP+G+ VD+AY IH+EIG+ A+VN +V
Sbjct: 405 YLDTLRENLFESEVYVFTPKGDLLALPQGSCPVDFAYRIHSEIGDHCAGARVNNKIVPLD 464
Query: 612 HVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
L N ++V+IIT+ NA S W+ T SAR++I ++ +
Sbjct: 465 TRLRNGDIVQIITHKNAHPSLD-------WINFVATSSARNRIRQWFK 505
>gi|254507261|ref|ZP_05119397.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
gi|219549721|gb|EED26710.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
Length = 706
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 313/559 (55%), Gaps = 65/559 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD
Sbjct: 14 YLTEPQIEALRQSYVVAKDAHEGQTRSSGEPYIIHPVAVARILAEMRLDIETLQAALLHD 73
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+EDT V T E +EE+FG TV +V+G VSKL KLK ++ ++ +A++ R+M LA
Sbjct: 74 VIEDTEV-TKEELEEQFGNTVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLA 125
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG++ IK+ELE L
Sbjct: 126 MVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYSPLAHRLGIHNIKTELEEL 185
Query: 320 SF--MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVC 377
F +Y N +V + V + + KE+ I E + L+ + +K +
Sbjct: 186 GFEALYPNR---YRVLKEVVKAARGNRKEM-----IQRIHTEIEGRLEEVGLKARVFGRE 237
Query: 378 KEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
K +SIY + + + I R++++ CY VLG VH ++
Sbjct: 238 KNLFSIYNKMKTKEQRFHTIMDIYAFRVVVESADT------------CYRVLGQVHSLYK 285
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P P MKDYIA PK NGYQSLHT+++ +EVQIRTE+MD +A++G+AAH+S +
Sbjct: 286 PRPGRMKDYIAVPKANGYQSLHTSMVG---PHGVPVEVQIRTEDMDQMADKGVAAHWSYK 342
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
G R T A W+ ++ E Q+ GN S EF++ +
Sbjct: 343 -------------GNGDRSGTTAQVKAQ-----RWMQSLLELQQS-AGN--SFEFIENVK 381
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL ++VFTP+G I LP GAT VD+AY +HT++GN V A+V+ N + L N
Sbjct: 382 SDLFPDEIYVFTPKGRIVELPVGATAVDFAYAVHTDVGNTCVGARVDRNPYPLSKALKNG 441
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTV 673
+ +EII+ +A WL + T AR KI + L RE++ + +
Sbjct: 442 QTIEIISAPGARPNAA------WLNYVVTSRARTKIRQVLKTMRREESITLGRRLLNHAL 495
Query: 674 GDF-VADSGEESEVEDLSD 691
G+ ++D EE+ LSD
Sbjct: 496 GELSLSDISEENIAHVLSD 514
>gi|392949030|ref|ZP_10314627.1| GTP pyrophosphokinase (p)ppGpp synthetase I [Lactobacillus pentosus
KCA1]
gi|392435748|gb|EIW13675.1| GTP pyrophosphokinase (p)ppGpp synthetase I [Lactobacillus pentosus
KCA1]
Length = 741
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 306/541 (56%), Gaps = 57/541 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + LV+RA A H Q R+SGEP+I+HP++VA IL EL++D E++A+G LHD
Sbjct: 5 YMNSDHVALVKRACDFATYVHKDQYRQSGEPYIMHPIQVAGILAELKMDPETVASGFLHD 64
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +EE FG V IV+G V+KLGK++ K+ + A++ R++ LA
Sbjct: 65 VVEDTGV-TLGDVEELFGHDVAVIVDG---VTKLGKIRYKSNKEQL----AENHRKLLLA 116
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 117 MSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDI 176
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + ++ EK +E A + + K + DL + EI K
Sbjct: 177 SLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH-----DLELPEAEIYGRPKH 231
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + +++ + +R+++ + CY VLG +H W P+
Sbjct: 232 IYSIYKKMRDKHKQFSQLYDLLAIRVVV------------DSIKDCYAVLGAIHTQWKPM 279
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LE+QIRT EM +AE G+AAH++ +
Sbjct: 280 PGRFKDYIAMPKANMYQSLHTTVVGPEGKP---LEIQIRTFEMHRVAEYGVAAHWAYK-- 334
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + +++ + I E Q+E + + +F++ + D
Sbjct: 335 ---------------EGKRDEVQETQSGNKLNLVKEIIELQDE---SKDAADFMEGVKGD 376
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+ FTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 377 LFSDRVYAFTPKGDVTELPKGAGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQIKNGDI 436
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGD 675
V+I+T + + S + W + TR AR+KI +F RE+ +S E+ + D
Sbjct: 437 VDILTSTSSTGPS-----RDWQKLVYTRRARNKIKQFFRNADREENIISGREMLEKQLRD 491
Query: 676 F 676
Sbjct: 492 L 492
>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 746
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 297/528 (56%), Gaps = 55/528 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E ++ +Y++ + V++AL A H Q R+SGEP+I+HP++VA IL EL++D +
Sbjct: 11 ESIKLVETYMNDEHVAFVKKALDFANYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPAT 70
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
+A+G LHD VEDTN+ T I+E FG V IV+G TK+SK+ + K+E A+
Sbjct: 71 VASGFLHDVVEDTNI-TLGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDE-------LAE 122
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R+M LAM +++RV++VKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ Q
Sbjct: 123 NHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQ 182
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
K ELE+ + Y N + Y ++ + + + ++EA K + + D +K
Sbjct: 183 FKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQIKASMTD------FNIKY 236
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
EI K YSIYK + E+ + +R+I+ + CY VLG
Sbjct: 237 EIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIV------------DTIKDCYAVLGA 284
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
+H W P+P KDYIA PK N YQSLHTT+I + LE+QIRTEEM +AE G+A
Sbjct: 285 IHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQP---LEIQIRTEEMHQVAEYGVA 341
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK + + +I I E +E + +
Sbjct: 342 AHWAYK-----------------EGKHDEVKYDSNGKKIDMFREILELGDE---TTNAAD 381
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++++ D+ RV+VFTP+G++ L +G+ +D+AY IHTE+GNK V AKVNG +V
Sbjct: 382 FMESVKGDIFSDRVYVFTPKGDVYELSQGSGPLDFAYTIHTEVGNKTVGAKVNGKIVPLN 441
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE 659
+ L N ++V+I+T S S+ R W+ T AR+KI +F ++
Sbjct: 442 YQLKNGDIVDILT----SPNSSPSR--DWINLVSTSKARNKIKRFFKQ 483
>gi|403379224|ref|ZP_10921281.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. JC66]
Length = 725
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 303/527 (57%), Gaps = 56/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L +YL +L ++ A A +AH GQ R+SGEP+I+HP+ VA I+ +++D S+
Sbjct: 7 LEKASTYLKEKDLNKIKEAYEFAEKAHHGQVRKSGEPYILHPLAVADIVVNMQMDVTSVI 66
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
A LLHD VEDT V + + ++E FG T +V+G TK+ K+ K K K E + ++
Sbjct: 67 AALLHDVVEDTTV-SLDTLKEHFGETCAMLVDGLTKLEKI-KFKSKQEQQN------ENY 118
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+MF+AM +++RVI++KLADRLHNMRTL + Q IA ETL++F P+A LG+ IK
Sbjct: 119 RKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIK 178
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
E+E+++ Y N + Y R+A+L ++ E E+ K ++ KI++ + M ++++I
Sbjct: 179 WEMEDIALRYLNPQKYY----RIANLMQKKRTEREQYIKDVIIKIKEK--VSEMGIESDI 232
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIYK + NE+ + +R+I+ + CY LG++H
Sbjct: 233 SGRPKHIYSIYKKMTARGKQFNEIYDLLAIRVIV------------DNIKDCYATLGIIH 280
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA PK N YQSLHTT+I E LEVQIRT EM +E GIAAH
Sbjct: 281 TLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGPKGEP---LEVQIRTWEMHRTSEYGIAAH 337
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + G A P+G + +++W I E Q E + EF+
Sbjct: 338 WAYK------EGSAVPSG-------------SFMEKMNWFREILELQNE---AKDASEFM 375
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
+++ D VFVFTP+GE+ LP G+ +D+AY IHTE+GN+ + AKVNG +V H
Sbjct: 376 ESLKMDFFSDLVFVFTPKGEVIELPAGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHK 435
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L N ++VEI+T SK ++ + WL+ A++ R+KI ++ +++
Sbjct: 436 LNNGDIVEILT-----SKHSYGPSQDWLKIAQSSHTRNKIKQWFKKE 477
>gi|116620408|ref|YP_822564.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
gi|116223570|gb|ABJ82279.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
Length = 742
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 304/545 (55%), Gaps = 59/545 (10%)
Query: 125 DSPERLWEDLRPTISYLSP-NELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG 183
D E+L+ +L I P ++L + +A A + H+GQ R SGEP++ HPV VA IL
Sbjct: 19 DPVEQLYRELEAKIREYRPKDDLTALEKAFRFASKYHEGQTRDSGEPYMAHPVMVAHILA 78
Query: 184 ELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENH 243
++ +D ++ GLLHD VEDT+V T E++ +EFG V R V+G TK++KL +
Sbjct: 79 DMRMDVVAMETGLLHDVVEDTSV-TVEQVRKEFGPDVARCVDGVTKLTKL-------DVF 130
Query: 244 SVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
S +D +A+ +R+M LAM E++RVI+VKLADR+HNMRTL ++ P ++ IA ET++++AP+
Sbjct: 131 SAEDRQAESVRKMLLAMVEDIRVILVKLADRIHNMRTLGYLNPERRERIARETIEIYAPI 190
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LGM +++ ELE+L+F + + Y ++ + +E+ L E + ++ +
Sbjct: 191 AHRLGMGKVRGELEDLAFQHLEPDAYQEILSAIESKRHSNEEFLNEIRHTVESELRRE-- 248
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
+ I K PYS+++ + + + S+++V + LRI L +
Sbjct: 249 ----GIPARIDGRVKRPYSVFQKMRRQKISLDQVYDLMALRI------------LTDSVK 292
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LG++H W PIP +KD+IA P+PN YQSLHT+++ ++ EVQIRTEEM
Sbjct: 293 NCYAALGVIHNKWRPIPGRIKDFIAIPRPNLYQSLHTSVVGPHGQT---FEVQIRTEEMH 349
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
IAE GIAAH+ + G G A + RI+WL + EWQ +
Sbjct: 350 RIAEEGIAAHWK---YKEGRKGPAVDDQ-----------------RIAWLRHLVEWQRDV 389
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
EF+ T+ DL + FTPRG++ LP+ AT +D+AY IH+++G+ V AKV
Sbjct: 390 ---QDPGEFMSTLKVDLYPEEAYTFTPRGKVIVLPRDATPIDFAYAIHSDVGSTCVGAKV 446
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAAL 663
NG +V L N ++VEI+T + + K WL KT AR+KI + +
Sbjct: 447 NGRIVPLRSTLRNGDIVEIMT------QPGHEPSKDWLAFVKTSRARNKIKHLINASERI 500
Query: 664 SASEI 668
A EI
Sbjct: 501 KAVEI 505
>gi|335996741|ref|ZP_08562658.1| GTP pyrophosphokinase [Lactobacillus ruminis SPM0211]
gi|335351811|gb|EGM53302.1| GTP pyrophosphokinase [Lactobacillus ruminis SPM0211]
Length = 739
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 307/542 (56%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + +VR+A A H Q R+SGEP+IIHP++VA IL +L++D E+++AG LHD
Sbjct: 19 YMNEEHVAMVRKACDFASYVHREQFRKSGEPYIIHPIQVAGILADLKMDPETVSAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T + E FG V IV+G V+KL K++ K S Q+ A++ R++ LA
Sbjct: 79 VVEDTPV-TLGDVGELFGKDVEVIVDG---VTKLSKIRYK----SHQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE++
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E + ++EA + + I D + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSKREERVQYIDEAITEIKEAIAD------LHLDCEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY + +++ + +R+++K + CY VLG +H W P+
Sbjct: 245 IYSIYHKMRDLHKQFSQIYDLLAVRVVVKSI------------KDCYAVLGAIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPKGKP---LEVQIRTEEMHRVAEYGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT + +++ I E Q E + ++EF++ + D
Sbjct: 348 ---------------EGKTNGIKQTTTGDKLNLFKEIIEIQNE---SNDAKEFMENVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+VFTP+G++ LPKG+ +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 390 LFSDRVYVFTPKGDVYELPKGSGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQVKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
V+I+T S+++ + WL+ T A++KI +F ++Q + + D + + +
Sbjct: 450 VDILT-----SQNSAGPSRDWLDLVHTNKAKNKIKRFFKQQDRIQNIDRGRDILDQGLIE 504
Query: 680 SG 681
G
Sbjct: 505 GG 506
>gi|50915040|ref|YP_061012.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS10394]
gi|50904114|gb|AAT87829.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS10394]
Length = 743
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKTDVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGHDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---INQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|239637561|ref|ZP_04678533.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
gi|239596779|gb|EEQ79304.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
Length = 729
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 295/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E + V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSESEYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++ F V RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDT-AYTFDDVKNMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + +IE + +D M++ EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAIGQIETE--MDKMSIVGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NTINDCYAILGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL + E + ++EF++++
Sbjct: 348 ----------------EGKTVNEKTQDFQNKLNWLKDLAETDH---TSSDAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V ++L +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
Length = 726
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 305/521 (58%), Gaps = 68/521 (13%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
E++ +A ++ AH GQ+R SGEP+IIHPVEVA IL E+ELD ++ A LLHDT+EDT
Sbjct: 21 FEMLEKAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEIELDCTALVAALLHDTIEDTT 80
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T+++++ +FG V +V+G V+KLGK+ + ++ + ++LR+MFLAM +++R
Sbjct: 81 C-TYDQLKAQFGQEVAELVDG---VTKLGKIPFTTK----EEQQVENLRKMFLAMAKDIR 132
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VI++KLADRLHNMRTL++M KQ A ETL+++APLA LG+ +IK ELE++ Y +
Sbjct: 133 VIMIKLADRLHNMRTLNYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLD 192
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
+ Y + ++ K+ E + L +K +L +I K YSIY+
Sbjct: 193 PKGYYDLVEKINTKRKQREAYITIIIDTLREKTN-----ELRIENAQIDGRPKHFYSIYR 247
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
++K +++++ + RII+ + + CY VLGLVH ++ P+P KD
Sbjct: 248 KMVKQNKTLDQIYDLFAFRIIV------------NSVKDCYAVLGLVHELYKPMPGRFKD 295
Query: 446 YIATPKPNGYQSLHTTLI-----PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
YIA PKPN YQSLHTTLI PF EVQIRT +M +AE GIAAH+ +
Sbjct: 296 YIAMPKPNMYQSLHTTLIGPEGQPF--------EVQIRTWDMHRVAEVGIAAHWK---YK 344
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIAL-RISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G +NNA + + +WL + EWQ++ EF++T+ D
Sbjct: 345 EG------------------INNAKDSDNKFAWLRQLLEWQKD---TRDESEFMETLKID 383
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L VFVFTP+G++ NLP G+T VD+AY IH+ IGNKM+ AK+NG + + L N ++
Sbjct: 384 LFTDEVFVFTPKGDVINLPVGSTPVDFAYAIHSAIGNKMIGAKINGKMEPIDYKLKNGDI 443
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++I+T + + S + WL+ K+ A+ KI ++ +++
Sbjct: 444 IDILTSSTIHGPS-----RDWLKIVKSSQAKSKINQWFKKE 479
>gi|306826586|ref|ZP_07459893.1| GTP diphosphokinase [Streptococcus pyogenes ATCC 10782]
gi|304431224|gb|EFM34226.1| GTP diphosphokinase [Streptococcus pyogenes ATCC 10782]
Length = 743
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
Length = 745
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 295/517 (57%), Gaps = 54/517 (10%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S + L+ RA A++ H+GQ R+SGEP+I HPV VA +L +L D +IAAG LHD V
Sbjct: 32 SDEQTNLICRAFNFAYQLHEGQYRKSGEPYIAHPVAVAGLLRDLGGDSVTIAAGFLHDVV 91
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT V T E IEE FG VR++VEG TK+SK K E +A++ R+MFL+M
Sbjct: 92 EDTEV-TPEEIEERFGTDVRQLVEGVTKLSKFN-FSSKTER------QAENFRRMFLSMA 143
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI+VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA LG+ + K ELE+LSF
Sbjct: 144 KDIRVIVVKLADRLHNMRTLEHLKPEKQQRIALETREIFAPLANRLGIGRFKWELEDLSF 203
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y E Y +++ VA+ + E +++ +I+ +++ L E++ K Y
Sbjct: 204 KYLEPEAYREIQALVAERRTDRETRIDKVTEIIRSRLQ-----KLGVNVFELKGRPKHLY 258
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
IY+ + + + +E+ IA +RII++ + CY L +VH + PIP
Sbjct: 259 GIYQKMQRQQKEFHEIFDIAAVRIIVE------------TNEECYRSLAVVHDAFKPIPG 306
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYI PKPN YQSLHTT++ + LE+QIRT EM IAE GIAAH+
Sbjct: 307 RFKDYIGLPKPNRYQSLHTTVVGL---NGRPLEIQIRTLEMHHIAEYGIAAHWK------ 357
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLL 561
+ G S LN+ + + +WL + EWQ + ++E++D++ +L
Sbjct: 358 -----YKETGSS----NTRLNSDD--EKFTWLRQLLEWQNDL---KDAQEYIDSLKDNLF 403
Query: 562 GSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVE 621
V+VFTP G++ L G+T VD+AY IHTE+GN M A+VNG L N ++VE
Sbjct: 404 EDDVYVFTPDGDVIALAHGSTPVDFAYRIHTEVGNHMKGARVNGRWSVLDRSLQNGDIVE 463
Query: 622 IITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
IIT +S + WL T +AR++I ++ +
Sbjct: 464 IITQK--NSHPSL----DWLNFVVTPTARNRIRQWYK 494
>gi|386363464|ref|YP_006072795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes Alab49]
gi|350277873|gb|AEQ25241.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes Alab49]
Length = 739
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 18 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 190 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|94995176|ref|YP_603274.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10750]
gi|94548684|gb|ABF38730.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10750]
Length = 743
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|254556843|ref|YP_003063260.1| GTP pyrophosphokinase [Lactobacillus plantarum JDM1]
gi|300768156|ref|ZP_07078061.1| GTP diphosphokinase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180784|ref|YP_003924912.1| GTP pyrophosphokinase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032762|ref|YP_004889753.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum WCFS1]
gi|254045770|gb|ACT62563.1| GTP pyrophosphokinase [Lactobacillus plantarum JDM1]
gi|300494220|gb|EFK29383.1| GTP diphosphokinase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308046275|gb|ADN98818.1| GTP pyrophosphokinase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342242005|emb|CCC79239.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum WCFS1]
Length = 755
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 298/519 (57%), Gaps = 53/519 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + LV+RA A H Q R+SGEP+I+HP++VA IL EL++D E++A+G LHD
Sbjct: 19 YMNSDHVALVKRACDFATYVHKDQYRQSGEPYIMHPIQVAGILAELKMDPETVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +EE FG V IV+G V+KLGK++ K+ + A++ R++ LA
Sbjct: 79 VVEDTGV-TLGDVEELFGHDVAVIVDG---VTKLGKIRYKSNKEQL----AENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 131 MSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + ++ EK +E A + + K + DL + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH-----DLELPEAEIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + +++ + +R+++ + CY VLG +H W P+
Sbjct: 246 IYSIYKKMRDKHKQFSQLYDLLAIRVVV------------DSIKDCYAVLGAIHTQWKPM 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LE+QIRT EM +AE G+AAH++ +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVGPEGKP---LEIQIRTFEMHRVAEYGVAAHWAYK-- 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + +++ + I E Q+E + + +F++ + D
Sbjct: 349 ---------------EGKRDEVQETQSGNKLNLVKEIIELQDE---SKDAADFMEGVKGD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+ FTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 391 LFSDRVYAFTPKGDVTELPKGAGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQIKNGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V+I+T + + S + W + TR AR+KI +F R
Sbjct: 451 VDILTSTSSTGPS-----RDWQKLVYTRRARNKIKQFFR 484
>gi|337288950|ref|YP_004628422.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfobacterium sp. OPB45]
gi|334902688|gb|AEH23494.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobacterium geofontis
OPF15]
Length = 725
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/527 (39%), Positives = 306/527 (58%), Gaps = 63/527 (11%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYL +V +A A H+GQ R+SGEP++ HP+EVA IL +++LD +IAAGLLH
Sbjct: 13 SYLPGCNTRIVEKAYEWAARIHEGQMRKSGEPYLSHPMEVAYILAQMKLDLPTIAAGLLH 72
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV--KADDLRQM 256
D VED+ V + E I++EFG V IV+G TK+ KN SV + +A+ LR++
Sbjct: 73 DVVEDSQV-SIEDIKKEFGEEVAFIVDGVTKL--------KNLPSSVDKLTQQAESLRKI 123
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
AM++++RVI+VKLADRLHNMRTL + HK+ IA ETL+++APLA LG+ +K EL
Sbjct: 124 IFAMSKDLRVILVKLADRLHNMRTLEYQAEHKRQRIAKETLEIYAPLAGRLGIDWVKCEL 183
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+L+F Y ++Y ++K V KE ++ +E KIL ++ L+ +K ++
Sbjct: 184 EDLAFKYLYPKEYERLKIEVEKRVKEAKEYVENVKKIL------EELLEKNNIKGKVLGR 237
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YS+YK + K +I+E++QI L G + + + CY LGLVH +W
Sbjct: 238 VKHLYSVYKKLQKYNLTIDELDQIYDL---------IGFRIIVNTVEECYKTLGLVHTLW 288
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH--Y 494
TPIP KDYI+ PKPN YQSLHTT+ L + ++E+QIRTE MD +A GIAAH Y
Sbjct: 289 TPIPGRFKDYISLPKPNMYQSLHTTV---LGPNSKKIEIQIRTEYMDRVANEGIAAHFLY 345
Query: 495 SGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVD 554
+F T GH + + WL+ + E Q+E REF++
Sbjct: 346 KEGIF-TSKHGHYK--------------------YLEWLSKLIELQKEL---KHPREFLE 381
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
++ DL ++VFTP+G++ LP GAT +D+AY IHTEIGN+ V A VN LV + L
Sbjct: 382 SLKLDLFPDEIYVFTPKGDVIVLPVGATPLDFAYAIHTEIGNRCVRAFVNDKLVPLDYKL 441
Query: 615 ANAEVVEIITYNALSSKSAFQR-HKQWLEHAKTRSARHKIMKFLREQ 660
++V+I T S +Q+ + WL+ T A+ +I ++ + +
Sbjct: 442 NTGDIVKIET-------SPYQKPSRDWLKIVVTGRAKSRIKQWFKRE 481
>gi|337750627|ref|YP_004644789.1| RelA protein [Paenibacillus mucilaginosus KNP414]
gi|379723680|ref|YP_005315811.1| RelA protein [Paenibacillus mucilaginosus 3016]
gi|386726431|ref|YP_006192757.1| RelA protein [Paenibacillus mucilaginosus K02]
gi|336301816|gb|AEI44919.1| RelA [Paenibacillus mucilaginosus KNP414]
gi|378572352|gb|AFC32662.1| RelA [Paenibacillus mucilaginosus 3016]
gi|384093556|gb|AFH64992.1| RelA protein [Paenibacillus mucilaginosus K02]
Length = 730
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 299/522 (57%), Gaps = 56/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SY+ +L+ +R A A +AH GQ R+SGEP+I+HP+ VA IL +++D SI A LLH
Sbjct: 12 SYVKEQDLKRIREAYEFADQAHFGQVRKSGEPYILHPLAVAEILVNMQMDTTSIIAALLH 71
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V + E + E+FGAT IV+G TK+ K+ K K K E+ + ++ R+MF+
Sbjct: 72 DVVEDTTV-SLETVHEKFGATCAMIVDGLTKLEKI-KFKSKEEHQN------ENYRKMFV 123
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H Q IA ETL++F P+A LG+ IK E+E+
Sbjct: 124 AMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIFCPIAHRLGISAIKWEMED 183
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
++ Y N + Y R+ +L ++ E E+ ++ +++ L M + +I K
Sbjct: 184 IALRYLNPQQYY----RIVNLMQKKRTEREQYINDVITNVKEK--LHEMGIDGDISGRPK 237
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + NE+ + LRII+ + CY LG++H +W P
Sbjct: 238 HIYSIYKKMTVRSKQFNEIYDLLALRIIV------------DNIKDCYATLGIIHTLWKP 285
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I E LEVQIRT EM +E G+AAH++ +
Sbjct: 286 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGEP---LEVQIRTFEMHRTSEYGVAAHWAYK- 341
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G P G + ++ ++ I E Q E ++EFV+++
Sbjct: 342 -----EGTNVPTG-------------SYEDKMHFIREIIELQNE---AQDAQEFVESLKM 380
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D VFVFTP+GE+ LP G+ +D+AY IHTE+GN+ + AKVNG +V H L +
Sbjct: 381 DFFSDLVFVFTPKGEVIELPVGSVPLDFAYRIHTEVGNRTIGAKVNGRIVPLDHRLKTGD 440
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A++ AR KI ++ +++
Sbjct: 441 IVEILT-----SKHSYGPSQDWVKIAQSSHARTKIRQWFKKE 477
>gi|405983984|ref|ZP_11042289.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
gi|404388799|gb|EJZ83881.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
Length = 788
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/521 (38%), Positives = 298/521 (57%), Gaps = 57/521 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T Y++ ++ L+ +A A EAH QKR+SGEPFI HP+EVA IL +L +D +++ A L
Sbjct: 57 TAEYINEDDQALLEKAYRFASEAHKEQKRKSGEPFIAHPIEVALILADLRMDADTLCAAL 116
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHDTVEDT T E + E F V ++V+G TK++++ E S+ D +A +R+M
Sbjct: 117 LHDTVEDTPT-TVEEVSELFNPQVAQLVQGVTKITRI-------EVGSLTDEQAATIRKM 168
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
F+AM++++RVI++KLADRLHNMRTLS + ++ A ETL+++AP+A LG+ IK EL
Sbjct: 169 FVAMSKDIRVIVIKLADRLHNMRTLSALKEDRRIFKARETLEIYAPIAHRLGIGSIKWEL 228
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y + + ++ R VA+ E E+ L + + L + L + + I
Sbjct: 229 EDLSFYYLDPAKFGQISRMVAESRVERERYLADVIETLTGE------LTKVNITGHIAGR 282
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + K +E+ + +R+I+K + CY VLG VH +W
Sbjct: 283 PKHLYSIYQKMTKRGKGFSEIYDLIAVRVIVKT------------VKDCYSVLGAVHALW 330
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA PK N YQSLHTT+I S LEVQIRTEEM ++E G+AAH+
Sbjct: 331 HPMPGRFKDYIAMPKLNMYQSLHTTVIG---PSGRPLEVQIRTEEMHRMSEYGVAAHWRY 387
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ +G + +I+WL + +WQEE SREF+ +
Sbjct: 388 K----------------EKGSKA---DEAFDRQIAWLRQMVDWQEE---TKDSREFLSDL 425
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
DL + VFVFTP G++ +L G+T VD+AY +H+E+GN V AKVNG +V ++ L
Sbjct: 426 KVDLAPTEVFVFTPAGDVMSLRSGSTPVDFAYNVHSEVGNHCVGAKVNGAIVPLSYELQM 485
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
+ VEI+T + + + W++ KT SAR K+ +
Sbjct: 486 GDRVEILTQKSATPS------RDWIKMVKTPSARSKLRSYF 520
>gi|387878869|ref|YP_006309172.1| GTP pyrophosphokinase [Streptococcus parasanguinis FW213]
gi|386792326|gb|AFJ25361.1| GTP pyrophosphokinase [Streptococcus parasanguinis FW213]
Length = 739
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 307/524 (58%), Gaps = 55/524 (10%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T YLSP ++ V++AL+ A + H GQ R+SGEP+IIHP++VA IL +L+LD ++A G
Sbjct: 16 TKKYLSPEDVAFVQKALVYAVDCHSGQFRQSGEPYIIHPIQVAGILAKLKLDAVTVACGF 75
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+ T + +E EFG VR IV+G V+KLGK+K K+ + A++ R+M
Sbjct: 76 LHDVVEDTDA-TLDDLEREFGHDVRVIVDG---VTKLGKVKYKSHEEQL----AENHRKM 127
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K EL
Sbjct: 128 LMAMSQDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWEL 187
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E+LSF Y N ++ K+ + + +E E+ +EE + + + + +I
Sbjct: 188 EDLSFRYLNETEFYKISHMMKEKRREREELVEEVVHKI------ETYAGERHLHGKIYGR 241
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +E+ + +R I L +P + Y +LG +H +W
Sbjct: 242 PKHIYSIYRKMQDKKKRFDEIYDLIAIRCI-----------LDTPSDV-YAMLGYIHELW 289
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT+ +E QIRT+EM +AE G+AAH++
Sbjct: 290 KPMPGRFKDYIANRKANGYQSIHTTVCG----PKGPIEFQIRTKEMHEVAEYGVAAHWAY 345
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ + G V N+ A+ ++W+ + E Q++ + ++EFV+ +
Sbjct: 346 KKGIKGQV-----------------NSKESAIGMNWIKEMMELQDQ---SGDAKEFVENV 385
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+L ++VFTP G +++LPK + +D+AY IHT++G K + AKVNG +V L
Sbjct: 386 KEDILAEEIYVFTPDGTVRSLPKDSGPIDFAYEIHTKVGEKAIGAKVNGRMVPLNTKLRT 445
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 446 GDQVEIIT-----NANSFGPSRDWLTLVKTSKARNKIRQFFKNQ 484
>gi|421892632|ref|ZP_16323259.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
pyogenes NS88.2]
gi|379981627|emb|CCG26981.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
pyogenes NS88.2]
Length = 739
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 18 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDEIEADFGQDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 190 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|255658298|ref|ZP_05403707.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
gi|260849615|gb|EEX69622.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
Length = 740
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 304/538 (56%), Gaps = 55/538 (10%)
Query: 123 KEDSPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
KE P + L SY +L+L+RRA LA +AH GQ R SGE +IIHP+ VA+IL
Sbjct: 4 KEKEPVTIENILDAVKSYSPKADLDLIRRAYELARKAHAGQTRVSGEAYIIHPLHVAQIL 63
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
+L LD +I+A LLHD VEDT + T ++++E FG V +++G V+KLG+L+ K
Sbjct: 64 TQLHLDDATISAALLHDVVEDT-IYTNDQMKEMFGDEVAMLIDG---VTKLGRLQYK--- 116
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
S ++ + + R+MFLAM +++RVI++KLADRLHNMRTL +M KQ IA ET++++AP
Sbjct: 117 -SKEEAQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIYAP 175
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK ELE+L Y E Y + V KE + ++ + + + +K+ +
Sbjct: 176 LANRLGISSIKWELEDLCLRYLEPEIYYDLVENVKQKRKERQTFIDTSIEQIKEKLAEAH 235
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQ 422
+K +I K YSIYK + + ++E+ ++ +R+ L
Sbjct: 236 ------IKADISGRAKHFYSIYKKMKRDNKELSEIYDLSAVRV------------LVDSV 277
Query: 423 QICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEM 482
+ CY VLG++H +W PIP KDYIA PK NGYQSLHTT++ Y LE+QIRT M
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGYP----LEIQIRTFAM 333
Query: 483 DLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEE 542
++E G+AAH+ + G A+ G + ++SWL + Q+E
Sbjct: 334 HQVSEYGVAAHWKYKEAGKG----AKATG-------------AVDQKMSWLRQMVNLQQE 376
Query: 543 FVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAK 602
+E+ + + D+ VFVFTP+G++ +LPKG+ +D+AY IHTE+G+ V AK
Sbjct: 377 L---SDPKEYFEALKVDVFSDEVFVFTPKGDVVDLPKGSIPIDFAYRIHTEVGHHCVGAK 433
Query: 603 VNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VNG LV + L N ++V +IT A + S + WL + R KI + +++
Sbjct: 434 VNGKLVPLEYKLKNGDIVSVITNKANNGPS-----RDWLNIVASSETRSKIRSWFKKE 486
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 290/518 (55%), Gaps = 54/518 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
SP+ +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL L D +AAG LHD
Sbjct: 38 FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 96
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
+EDT+V T E +E FG VR +VEG TK+SK + + +A++ R+MFLAM
Sbjct: 97 IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 148
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
+++RVI+VKLADRLHNMRTL M KQ SIA ET ++FAPLA LG+ ++K ELE+L+
Sbjct: 149 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 208
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F Y E Y +++ RVAD E++L IL ++E E+ K
Sbjct: 209 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 263
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
Y IYK + + +E+ IA LR+I++ + CY L +VH + PIP
Sbjct: 264 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 311
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYI PKPN YQSLHT +I + +EVQIRT EM IAE GIAAH+
Sbjct: 312 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHIAEYGIAAHWK----- 363
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ G S GK + + +WL + EWQ + ++E++DT+ +L
Sbjct: 364 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 409
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTP G++ L GAT VD+AY +H+E+GN AKVN +V VL N ++V
Sbjct: 410 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 469
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
EI+T N S S WL +T +A+++I ++ +
Sbjct: 470 EILT-NKNSHPSL-----DWLNFVRTSTAKNRIRQWYK 501
>gi|317058925|ref|ZP_07923410.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 3_1_5R]
gi|313684601|gb|EFS21436.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 3_1_5R]
Length = 725
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 303/525 (57%), Gaps = 63/525 (12%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L+ V+ A LA E+H+GQ R+SGE +I+HP+EVA+IL L+ D ++I A +LHD VEDT
Sbjct: 19 DLDKVKLAYYLAEESHEGQYRKSGEAYIMHPIEVAKILVGLKSDTDTIIAAILHDIVEDT 78
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+T IE FG V +V+G V+KL L +N S +++R+M LAMT+ +
Sbjct: 79 -FITLADIEYNFGKNVAHLVDG---VTKLKSLPNGTKNQS------ENIRKMILAMTQNL 128
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
VI++KLADRLHNMRTL M P KQ +IA ETL+V+APLA LG+ +IK ELE+L Y
Sbjct: 129 HVILIKLADRLHNMRTLKFMKPEKQVAIAQETLEVYAPLAHRLGIAKIKWELEDLCLYYL 188
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ + Y ++ R + D K+ K+ ++ M +I D + +K +++ K YSIY
Sbjct: 189 HNDKYLEI-RSLIDKKKDERKDYIDSFIQTMTRILSD-----VGIKGQVKGRFKHFYSIY 242
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
K + + +++ + +RII+ S CYHVLG VH +TP+P K
Sbjct: 243 KKMYELGKEFDDIYDLMGVRIIV------------SNTSDCYHVLGEVHSRYTPVPGRFK 290
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA PK N YQS+HTT++ L + +E+QIRTEEMD +AE G+AAH++ +
Sbjct: 291 DYIAVPKSNNYQSIHTTIVGPLAKF---IEIQIRTEEMDKVAEEGVAAHWAYK------- 340
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
R + + WL I E Q+ + +FV ++T D+
Sbjct: 341 -EKRKTNKDDQ-------------IYGWLRNIIELQQ---NTSNTEDFVKSVTADIKNDT 383
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+FVF+P+G+I LP AT +D+A+ +HT++G + + AKVNG +V L N + VEIIT
Sbjct: 384 IFVFSPKGDIVELPNMATTLDFAFAVHTQVGCRCIGAKVNGKIVPLDTKLQNGDRVEIIT 443
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEIT 669
SK++ K WLE +T A+ KI KFL++ ++A EIT
Sbjct: 444 -----SKNSKGPSKDWLEIVRTHGAKSKIRKFLKD---VNAEEIT 480
>gi|428219731|ref|YP_007104196.1| (p)ppGpp synthetase I SpoT/RelA [Pseudanabaena sp. PCC 7367]
gi|427991513|gb|AFY71768.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena sp. PCC 7367]
Length = 746
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 294/521 (56%), Gaps = 58/521 (11%)
Query: 141 LSPNELE-LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES-IAAGLLH 198
+ P + E ++ RAL A E H+GQ R SGEP+I+HP+EVA IL +L ++ I AG LH
Sbjct: 34 IDPEDPEAIICRALKFACELHEGQYRASGEPYILHPIEVATILRDLGGGSKAMIVAGFLH 93
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT V T IE EFGA + +VEG TK+SK + K E A++ R+MFL
Sbjct: 94 DVVEDTEV-TVADIEAEFGAEIAALVEGVTKLSKFN-FESKTER------AAENFRRMFL 145
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI+VKLADRLHNMRTL H+P KQ++IA ET+++FAPLA LG+ QIK ELE+
Sbjct: 146 AMAQDIRVIVVKLADRLHNMRTLEHLPAPKQANIARETMEIFAPLANRLGIGQIKWELED 205
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF Y + + Y +++ V + + E+ L IL +IE L EI K
Sbjct: 206 LSFKYIDKDAYQQMRSLVVENRRNREERLARVRDILRSRIEQ-----LGLTNFEISGRPK 260
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
Y IY+ + + E+ ++ +RII++ K + CY VL +VH + P
Sbjct: 261 HLYGIYQKMQVRQKKYEEIYDVSAIRIIVENK------------EACYRVLAVVHDCFRP 308
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
IP KDYI PKPN YQSLHT +I + LEVQIRT EM IAE GIAAH+ +
Sbjct: 309 IPGRFKDYIGLPKPNRYQSLHTVVIG---PNGRPLEVQIRTWEMHHIAEYGIAAHWKYKE 365
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ ++ + + +WL + EWQ E + +E++DT+
Sbjct: 366 TNSSHQATSQEDEK-----------------FTWLRQLVEWQRELKDD---QEYIDTLKE 405
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
+L V+VF+P+G++ LP+GAT VD+AY IHTE+GN A VN +V L N +
Sbjct: 406 NLFDHEVYVFSPKGDVYCLPRGATAVDFAYRIHTELGNHCAGALVNEFMVPLDRKLQNGD 465
Query: 619 VVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+V ++ + NA S W+ T SARH+I ++ +
Sbjct: 466 IVTVLRHKNAHPSLD-------WINFVATSSARHRIRQWYK 499
>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
Length = 764
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 290/518 (55%), Gaps = 54/518 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
SP+ +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL L D +AAG LHD
Sbjct: 38 FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 96
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
+EDT+V T E +E FG VR +VEG TK+SK + + +A++ R+MFLAM
Sbjct: 97 IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 148
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
+++RVI+VKLADRLHNMRTL M KQ SIA ET ++FAPLA LG+ ++K ELE+L+
Sbjct: 149 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 208
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F Y E Y +++ RVAD E++L IL ++E E+ K
Sbjct: 209 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 263
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
Y IYK + + +E+ IA LR+I++ + CY L +VH + PIP
Sbjct: 264 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 311
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYI PKPN YQSLHT +I + +EVQIRT EM IAE GIAAH+
Sbjct: 312 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHIAEYGIAAHWK----- 363
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ G S GK + + +WL + EWQ + ++E++DT+ +L
Sbjct: 364 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 409
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTP G++ L GAT VD+AY +H+E+GN AKVN +V VL N ++V
Sbjct: 410 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 469
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
EI+T N S S WL +T +A+++I ++ +
Sbjct: 470 EILT-NKNSHPSL-----DWLNFVRTSTAKNRIRQWYK 501
>gi|303232508|ref|ZP_07319195.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
gi|302481392|gb|EFL44465.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
Length = 829
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 305/529 (57%), Gaps = 50/529 (9%)
Query: 131 WEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILG-ELELD 188
W LR + YL L + A A AH Q+R+SGEP+I HPVEVA IL +L +D
Sbjct: 75 WRALRSICAHYLGSTALARIDEAYDFASAAHKDQRRQSGEPYINHPVEVAFILAKDLHMD 134
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+SI + +LHDTVEDT+ T + IEE FG TVR +V+G TK++ + E S+ +
Sbjct: 135 EDSICSAILHDTVEDTSA-TLDDIEERFGYTVRELVDGVTKLTSI-------EVSSMDEK 186
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A +LR+MFLAM++++RVII+KLADRLHNMRTL+ +P ++++ A ET V+APLA LG
Sbjct: 187 QALNLRKMFLAMSKDIRVIIIKLADRLHNMRTLAALPENRRTFKAKETRDVYAPLADRLG 246
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
+ IK ELE+L+F+Y + ++Y ++ R V + E+ + IL +D+ +
Sbjct: 247 ISSIKWELEDLAFLYLDHDEYQRIARMVQQSRAQREQNITSTIHIL-----EDELARVGM 301
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
I+ K +SIY+ +++ + N++ + +R++ K VG CY
Sbjct: 302 QGVSIQGRPKHLWSIYQKMIRKDKNFNDIYDLIAIRVLTKT-----VGD-------CYSA 349
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG VH IW P+P KDYIA PKPNGY+SLHTT+I +E+QIRT EM AE
Sbjct: 350 LGSVHTIWHPLPGRFKDYIAMPKPNGYRSLHTTVIGI---DARPIEIQIRTYEMHSQAEY 406
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIAAH+ + S +GK + + I +I+W+ +W +
Sbjct: 407 GIAAHWLYK------------KSGSSQGK-MSRDEKEIDSQINWIRKSLDWTVDDD-LDD 452
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
EF++ + DL +FVFTP+GE+ NL + AT +D+AY +HTE+GN V AK+NG++V
Sbjct: 453 PHEFMNNLRLDLFEDEIFVFTPKGEVINLRRDATPLDFAYAVHTEVGNHCVGAKINGSVV 512
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
T+ L N + +E++T +K+A H WL T SA+ K+ K+
Sbjct: 513 PLTYRLQNGDRIEVLT-----NKNARPSH-DWLHVCTTPSAKAKVRKYF 555
>gi|448821490|ref|YP_007414652.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum ZJ316]
gi|448274987|gb|AGE39506.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum ZJ316]
Length = 741
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 298/519 (57%), Gaps = 53/519 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + LV+RA A H Q R+SGEP+I+HP++VA IL EL++D E++A+G LHD
Sbjct: 5 YMNSDHVALVKRACDFATYVHKDQYRQSGEPYIMHPIQVAGILAELKMDPETVASGFLHD 64
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +EE FG V IV+G V+KLGK++ K+ + A++ R++ LA
Sbjct: 65 VVEDTGV-TLGDVEELFGHDVAVIVDG---VTKLGKIRYKSNKEQL----AENHRKLLLA 116
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 117 MSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDI 176
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + ++ EK +E A + + K + DL + EI K
Sbjct: 177 SLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH-----DLELPEAEIYGRPKH 231
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + +++ + +R+++ + CY VLG +H W P+
Sbjct: 232 IYSIYKKMRDKHKQFSQLYDLLAIRVVV------------DSIKDCYAVLGAIHTQWKPM 279
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LE+QIRT EM +AE G+AAH++ +
Sbjct: 280 PGRFKDYIAMPKANMYQSLHTTVVGPEGKP---LEIQIRTFEMHRVAEYGVAAHWAYK-- 334
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + +++ + I E Q+E + + +F++ + D
Sbjct: 335 ---------------EGKRDEVQETQSGNKLNLVKEIIELQDE---SKDAADFMEGVKGD 376
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+ FTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 377 LFSDRVYAFTPKGDVTELPKGAGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQIKNGDI 436
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V+I+T + + S + W + TR AR+KI +F R
Sbjct: 437 VDILTSTSSTGPS-----RDWQKLVYTRRARNKIKQFFR 470
>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
Length = 756
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 304/541 (56%), Gaps = 65/541 (12%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H GQ R+SGEP+I HPV VA +L +L IAAG LHD VEDT V
Sbjct: 43 LICRAFQFAYQLHQGQYRKSGEPYIGHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEV- 101
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T ++IEE FG VR++VEG TK+SK+ K K E+ +A++ R+MFLAM +++RVI
Sbjct: 102 TIDQIEERFGPEVRQLVEGVTKLSKI-NFKSKTES------QAENFRRMFLAMAQDIRVI 154
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL MP K+ IA ET +FAPLA LG++Q K ELE+L+F Y E
Sbjct: 155 VVKLADRLHNMRTLQFMPDEKRRRIAQETRDIFAPLANRLGIWQFKWELEDLAFKYLEPE 214
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+ +++ V++ E++L + IL +++ Q + V R+ K Y IY+ +
Sbjct: 215 AFRQIQTYVSEKRAAREEKLTKVTDILRQRL---QQAGVRCVDVSGRT--KHLYGIYQKM 269
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ + +E+ +A LRII++ + CY L +VH + PIP KDYI
Sbjct: 270 HRQQKEFHEIYDLAALRIIVQTN------------EECYRALAVVHDAFRPIPGRFKDYI 317
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHT ++ LEVQIRT+EM +AE GIAAH+
Sbjct: 318 GLPKPNRYQSLHTGVMGLTGRP---LEVQIRTQEMHHVAEYGIAAHWK-----------Y 363
Query: 508 RPNGRSPRGKTVCLNNANIA---LRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ +G S NN+ + + +WL + +WQ + ++E++D++ +L
Sbjct: 364 KESGGS--------NNSQVTGTDEKFTWLRQLLDWQSDL---KDAQEYLDSVKDNLFEDD 412
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V+VFTP+G++ L G+T +D+AY IHTE+GN A+VNG +V + L N ++V+IIT
Sbjct: 413 VYVFTPKGDVVPLSPGSTSIDFAYRIHTEVGNHCAGARVNGRMVPLSTRLQNGDIVDIIT 472
Query: 625 Y-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVGDFVAD 679
N S WL +T +A+++I ++ RE+ E+ +G D
Sbjct: 473 LKNGHPSLD-------WLNFVRTSAAKYRIKQWYKRSRREENVARGRELLEKELGKTGFD 525
Query: 680 S 680
S
Sbjct: 526 S 526
>gi|347525617|ref|YP_004832365.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 27782]
gi|345284576|gb|AEN78429.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 27782]
Length = 739
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 307/542 (56%), Gaps = 54/542 (9%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + +VR+A A H Q R+SGEP+IIHP++VA IL +L++D E+++AG LHD
Sbjct: 19 YMNEEHVAMVRKACDFASYVHREQFRKSGEPYIIHPIQVAGILADLKMDPETVSAGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T + E FG V IV+G V+KL K++ K S Q+ A++ R++ LA
Sbjct: 79 VVEDTPV-TLGDVGELFGKDVEVIVDG---VTKLSKIRYK----SHQEQLAENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVIIVKLADRLHNMRTL H+ P KQ IA ETL+++APLA LG+ IK ELE++
Sbjct: 131 MSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + +E + ++EA + + I D + + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSKREERVQYIDEAITEIKEAIAD------LHLDCEIYGRPKH 244
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIY + +++ + +R+++K + CY VLG +H W P+
Sbjct: 245 IYSIYHKMRDLHKQFSQIYDLLAVRVVVKSI------------KDCYAVLGAIHTKWKPM 292
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT+I + LEVQIRTEEM +AE GIAAH++ +
Sbjct: 293 PGRFKDYIAMPKANMYQSLHTTVIGPKDKP---LEVQIRTEEMHRVAEYGIAAHWAYK-- 347
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GKT + +++ I E Q E + ++EF++ + D
Sbjct: 348 ---------------EGKTNGVKQTTTGDKLNLFKEIIEIQNE---SNDAKEFMENVKGD 389
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+VFTP+G++ LPKG+ +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 390 LFSDRVYVFTPKGDVYELPKGSGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQVKNGDI 449
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVAD 679
V+I+T S+++ + WL+ T A++KI +F ++Q + + D + + +
Sbjct: 450 VDILT-----SQNSAGPSRDWLDLVHTNKAKNKIKRFFKQQDRIQNIDRGRDILDQGLIE 504
Query: 680 SG 681
G
Sbjct: 505 GG 506
>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
Length = 758
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 295/509 (57%), Gaps = 60/509 (11%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H GQ R+SGEP+I HP+ VA +L +L IAAG LHD VEDT+V
Sbjct: 43 LICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDV- 101
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E IE+ FG+ VR +VEG TK+SK+ K K E+ +A++ R+MFLAM +++RVI
Sbjct: 102 TIEEIEQRFGSEVRCLVEGVTKLSKI-NFKSKTES------QAENFRRMFLAMAQDIRVI 154
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL +MP K+ ATET ++FAPLA LG+++ K ELE+L+F Y E
Sbjct: 155 VVKLADRLHNMRTLEYMPDEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPE 214
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+ ++++ V++ + E+ L++ ++ L ++ + L +I K YSIY+ +
Sbjct: 215 AFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCL-----DISGRPKHLYSIYQKM 269
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ +E+ +A LRII++ + CY L +VH ++ PIP KDYI
Sbjct: 270 QRQNKEFHEIYDLAALRIIVQ------------TNEECYRALAVVHDVFRPIPGRFKDYI 317
Query: 448 ATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
PKPN YQSLHT +I P+ LEVQIRT EM +AE GIAAH+
Sbjct: 318 GLPKPNRYQSLHTGVIGPWGRP----LEVQIRTMEMHHVAEYGIAAHWK----------- 362
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ G S G T + +WL + EWQ + ++E++++I +L ++
Sbjct: 363 YKETGGSHTGLTASDE------KFTWLRQLLEWQSDL---KDAQEYLESIKDNLFEEDIY 413
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT-- 624
VFTP+G++ L G+T VD+AY IHTE+GN+ +VNG +V + L N ++VEIIT
Sbjct: 414 VFTPKGDLVALKPGSTTVDFAYRIHTEVGNRCTGVRVNGRMVPLSTRLQNGDIVEIITQK 473
Query: 625 --------YNALSSKSAFQRHKQWLEHAK 645
N + + +A R KQW + ++
Sbjct: 474 NGHPSLDWLNFVRTSAAKNRIKQWYKRSR 502
>gi|418275522|ref|ZP_12890845.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376009073|gb|EHS82402.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 755
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 298/519 (57%), Gaps = 53/519 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + + LV+RA A H Q R+SGEP+I+HP++VA IL EL++D E++A+G LHD
Sbjct: 19 YMNSDHVALVKRACDFATYVHKDQYRQSGEPYIMHPIQVAGILAELKMDPETVASGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT V T +EE FG V IV+G V+KLGK++ K+ + A++ R++ LA
Sbjct: 79 VVEDTGV-TLGDVEELFGHDVAVIVDG---VTKLGKIRYKSNKEQL----AENHRKLLLA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RV+IVKLADRLHNMRTL H+ P KQ IA ETL+++AP+A LG+ IK ELE++
Sbjct: 131 MSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIYAPIADRLGISTIKWELEDI 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
S Y N + Y ++ + ++ EK +E A + + K + DL + EI K
Sbjct: 191 SLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH-----DLELPEAEIYGRPKH 245
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK + +++ + +R+++ + CY VLG +H W P+
Sbjct: 246 IYSIYKKMRDKHKQFSQLYDLLAIRVVV------------DSIKDCYAVLGAIHTQWKPM 293
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK N YQSLHTT++ + LE+QIRT EM +AE G+AAH++ +
Sbjct: 294 PGRFKDYIAMPKANMYQSLHTTVVGPEGKP---LEIQIRTFEMHRVAEYGVAAHWAYK-- 348
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
GK + +++ + I E Q+E + + +F++ + D
Sbjct: 349 ---------------EGKRDEVQETQSGNKLNLVKEIIELQDE---SKDAADFMEGVKGD 390
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
L RV+ FTP+G++ LPKGA +D AY IHTE+GN AKVNG +V + + N ++
Sbjct: 391 LFSDRVYAFTPKGDVTELPKGAGPLDMAYSIHTEVGNHTTGAKVNGKIVPLDYQIKNGDI 450
Query: 620 VEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
V+I+T + + S + W + TR AR+KI +F R
Sbjct: 451 VDILTSTSSTGPS-----RDWQKLVYTRRARNKIKQFFR 484
>gi|291458831|ref|ZP_06598221.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418085|gb|EFE91804.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 753
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 317/539 (58%), Gaps = 59/539 (10%)
Query: 127 PERLWEDLRPTISYLSPNE-LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
PE+L++ L + P+E L ++ +A +A + H QKR+SGEP+IIHP+ VA IL +L
Sbjct: 19 PEKLYQRLIEIVRKYRPSEDLSMIEKAYEVAKKQHKDQKRKSGEPYIIHPICVAIILADL 78
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
++D E+IAAGLLHD VEDT + T + +E+EF V +V+G TK++++ N V
Sbjct: 79 QMDRETIAAGLLHDVVEDTGM-TLQELEKEFNPDVALLVDGVTKLTQI--------NLDV 129
Query: 246 QDV--KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPL 303
V +A++LR+MF++M +++RV+I+KLADRLHN+RTL + P K+ A E+L +++PL
Sbjct: 130 DKVEQQAENLRKMFVSMAKDIRVVIIKLADRLHNLRTLEYQSPEKRKEKARESLDIYSPL 189
Query: 304 AKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF 363
A LG+ +IK E+++LS Y + Y + +V +K +E + ++K + ++
Sbjct: 190 ADRLGISKIKIEMDDLSLKYLEPDVYYDLVEKVH--FKREAREARIGH--IVKDVS--KY 243
Query: 364 LDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQ 423
L V+ EI+ K +SIY+ ++ +I+++ + +RII+K +G
Sbjct: 244 LHDRGVEAEIKGRVKHFFSIYRKMVNQNKTIDQIYDLFAIRIIVKT-----LGD------ 292
Query: 424 ICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMD 483
CY LG +H ++ PIP KDYIA PK N YQSLHTT+I E EVQIRTEEM
Sbjct: 293 -CYASLGYIHKMYHPIPGRFKDYIAMPKANMYQSLHTTVID---EEGVPFEVQIRTEEMH 348
Query: 484 LIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
AE GIAAH+ + G + + A +A +++WL+ I EWQ +
Sbjct: 349 RTAEVGIAAHWK----------YKEQGGSGEKA-----SEAELA-KMNWLHQILEWQND- 391
Query: 544 VGNMTSREFVDTITRD--LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
S+EF+ + D L V+ FTP G++KNLP G+ +D+AY IH+ +GN+MV A
Sbjct: 392 --ETDSKEFMKLVKSDFNLFNDNVYCFTPSGDVKNLPFGSCPIDFAYAIHSAVGNRMVGA 449
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
KVN LV ++L N + VEIIT S+++ + WL+ K+ AR+KI ++ R +
Sbjct: 450 KVNDRLVPIEYILKNGDRVEIIT-----SQNSRGPSRDWLKIVKSTQARNKINQWFRHE 503
>gi|421190653|ref|ZP_15647949.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|421191378|ref|ZP_15648655.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
gi|399969423|gb|EJO03763.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|399972201|gb|EJO06415.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
Length = 748
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 302/540 (55%), Gaps = 52/540 (9%)
Query: 129 RLWEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
R +ED+ + YL+P++++ V A LA + H GQKR+SGE +I HP++VA IL +L++
Sbjct: 7 RSFEDVHDIYVKYLAPDQVKRVDSAYQLAKKMHAGQKRKSGEDYIYHPIQVAGILADLKM 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D ++IAAG LHD VEDT T + I + +G V IV+G V+KLG++ + S ++
Sbjct: 67 DPDTIAAGFLHDVVEDTPE-TNDEIRQNYGDDVADIVDG---VTKLGRIHYE----STEE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
A++ R++ LAM ++VRVIIVKLADRLHNMRTL P KQ IA+ETL ++APLA L
Sbjct: 119 NMAENHRKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRPEKQHRIASETLDIYAPLAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ IK ELE+LS Y + ++Y ++ + + +E + ++ A K + K I DL
Sbjct: 179 GLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDADIASATKQIEKVIS-----DLK 233
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
E+ K YSIY+ + +E+ + +R+ L CY
Sbjct: 234 IGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRV------------LVDSVDDCYA 281
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG +H W P+P KDYIA PKPNGYQSLHTT+I + LEVQIRT EM +AE
Sbjct: 282 ALGTIHANWKPLPGRFKDYIALPKPNGYQSLHTTIIG---PNGHPLEVQIRTFEMHQVAE 338
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH++ + N S + V ++ LNAI+ E G
Sbjct: 339 FGVAAHWA-----------YKENKGSEKQARVSDSDQ------QHLNAIQGILELQEGAT 381
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+ +FVDT+ DL RV+ FTP+G++ LP G+ +D A+ IH++IG V AKVNG +
Sbjct: 382 DAEQFVDTVKGDLFSDRVYAFTPKGDVFELPVGSKPIDMAFAIHSDIGLHTVGAKVNGKI 441
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
V + + ++VEI+T S R WL +R AR+KI + R+QA S E
Sbjct: 442 VPLDYEIQTGDIVEIVT----SPTPKVSR--DWLGLVASRRARNKIRAYFRQQARSSNIE 495
>gi|326803463|ref|YP_004321281.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651531|gb|AEA01714.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
Length = 748
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 303/520 (58%), Gaps = 53/520 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
Y+ +++ ++++A A AH+GQKR+SGEPF IHP +VA IL +L++D +++A G LH
Sbjct: 18 QYMPEDKVAMIKKACAFAERAHEGQKRKSGEPFFIHPTQVAGILADLQMDPDTVATGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT + T + IE F T+ +V+G V+KLGK+K +++ + A++ +++ L
Sbjct: 78 DVVEDTGI-TLDDIEYFFSKTIATLVDG---VTKLGKVKYRSKEEQL----AENHQKLLL 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM ++RVI+VKLADRLHNMRTL P KQ SI+ ETL ++APLA LGM QIK ELE+
Sbjct: 130 AMANDLRVIVVKLADRLHNMRTLKWHRPEKQVSISEETLDIYAPLADRLGMSQIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
Y N E Y ++ + +E E ++ +L K ++ ++ + +I K
Sbjct: 190 TCLRYINPEAYYQIVHLMNSKREEREAYIDATIDVLNKYVK-----PIIDGEYDIYGRPK 244
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIYK + + + + +E+ + +R+ L + CY VLG+VH W P
Sbjct: 245 HIYSIYKKMHQQKKTFDEIYDLLAIRV------------LVPSVKDCYAVLGIVHTSWKP 292
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQSLHTT+ L E +E+QIRT +M +AE G+AAH++ +
Sbjct: 293 LPGRFKDYIAMPKANGYQSLHTTV---LGEHGQPVEIQIRTFDMHEVAEYGVAAHWAYK- 348
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+G T + ++ ++ W + I + Q++ + + +FV+++
Sbjct: 349 ----------------KGVTDKVETDDLDKQLEWFHQIEDLQDD---SDDATQFVESVKE 389
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ +V+VFTP+G++ LP GA+ +D+AY IHTE+G+ V AKVNG +V + L +
Sbjct: 390 DIFKDKVYVFTPKGDVSELPSGASPLDFAYQIHTEVGHSTVGAKVNGKIVPLNYGLHTGD 449
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+VEI+T SK++ + W+ T A++KI + +
Sbjct: 450 IVEILT-----SKNSAGPSRDWVNFVVTNRAKNKIKRHFK 484
>gi|386587178|ref|YP_006083580.1| GTP pyrophosphokinase [Streptococcus suis D12]
gi|353739324|gb|AER20332.1| GTP pyrophosphokinase [Streptococcus suis D12]
Length = 733
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 303/524 (57%), Gaps = 59/524 (11%)
Query: 137 TISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
T +YL ++ V++AL A EAH Q R+SGEP+I+HP++VA IL L+LD ++A G
Sbjct: 15 TATYLPEEDVIFVKKALDFATEAHKSQFRKSGEPYIVHPIQVAGILAGLKLDAVTVACGF 74
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHD VEDT+V T + +E EFG VR IV G V+KLGK++ K+ + A++ R M
Sbjct: 75 LHDVVEDTDV-TLDDMEAEFGPEVRHIVGG---VTKLGKVEYKSHEEQL----AENHRNM 126
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
+AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ IK EL
Sbjct: 127 LIAMSQDMRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSIKWEL 186
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSV 376
E++SF Y N ++ K+ R +++ +E E+ + E ++ K+ D + + + +I
Sbjct: 187 EDMSFRYLNEIEFYKITRMMSEKRREREELVNE----VVDKLRD--YTEERHLHGQIYGR 240
Query: 377 CKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIW 436
K YSIY+ + + +++ + +R I+ +P + Y +LG +H +W
Sbjct: 241 PKHIYSIYRKMHDKKKRFDQLYDLIAIRCIMD-----------TPSDV-YAMLGYIHELW 288
Query: 437 TPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSG 496
P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH++
Sbjct: 289 KPMPGRFKDYIANQKANGYQSIHTT----VYGPRGPIEFQIRTKEMHQVAEYGVAAHWAY 344
Query: 497 RVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTI 556
+ RG + + W+N + E QE G ++ FV+++
Sbjct: 345 K-----------------RGGKATASEK----ELRWINNLIELQE---GAGDAQTFVNSV 380
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLAN 616
D+ R++VFTP G ++ LPK + +D+AY IHT++G + AKVNG +V T L
Sbjct: 381 KDDIFTERIYVFTPDGAVRELPKDSVPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKT 440
Query: 617 AEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ VEIIT S ++F + W+ KT AR+KI +F + Q
Sbjct: 441 GDQVEIIT-----SANSFGPSRDWVNLVKTHKARNKIKQFFKNQ 479
>gi|417645315|ref|ZP_12295229.1| GTP diphosphokinase [Staphylococcus warneri VCU121]
gi|445059472|ref|YP_007384876.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
gi|330683916|gb|EGG95684.1| GTP diphosphokinase [Staphylococcus epidermidis VCU121]
gi|443425529|gb|AGC90432.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
Length = 729
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 294/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E + V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSESEYQYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT TF+ ++ F V RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDT-AYTFDDVKNMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + +IE + +D M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYIDNAIGQIETE--MDKMNIVGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY +LGLVH +W P
Sbjct: 244 HIYSIYRKMMKQKKQFDQIFDLLAIRIIV------------NTINDCYAILGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTYEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL + E + ++EF++++
Sbjct: 348 ----------------EGKTVNEKTQDFQNKLNWLKDLAETDH---TSSDAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V ++L +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
10605]
Length = 751
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 287/512 (56%), Gaps = 55/512 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A+ H+GQ R+SGEP+I HP+ VA +L +L D E IAAG LHD VEDT
Sbjct: 39 LICRAFQFAYSLHEGQMRKSGEPYIAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDT-PT 97
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E IE FG VR++VE TK+SK K E +A++ R+MF+AM +++RVI
Sbjct: 98 TPEDIEVMFGKNVRQLVEAVTKLSKFN-FSSKTER------QAENFRRMFIAMAQDIRVI 150
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL +PP KQ IA ET ++FAPLA LG++ K ELE+LSF Y + E
Sbjct: 151 VVKLADRLHNMRTLDFLPPEKQRLIAEETKEIFAPLANRLGIWHFKWELEDLSFKYLHPE 210
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y K+K +A+ + E +E + +++E +L E++ K Y IY +
Sbjct: 211 AYNKIKNLIAERRTDREARIENVIDTINQRLE-----NLGIHPVEVKGRPKHLYGIYHKM 265
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
++ + ++ IA +RII+ + CY L +VH + PIP KDYI
Sbjct: 266 MRQKKEFEQIYDIAAVRIIV------------NTNDECYRTLAVVHDAFRPIPGRFKDYI 313
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFR-LEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
PKPN YQSLHTT++ S R LE+QIRT EM +AE GIAAH+ + GH
Sbjct: 314 GLPKPNLYQSLHTTVV----NSNGRPLEIQIRTLEMHYVAEYGIAAHWKYKE-----TGH 364
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ S + + +WL + +WQ++ ++E+VD + +L V+
Sbjct: 365 SNHRHLSSDDE-----------KFTWLRQLLDWQKDL---KDAQEYVDNLKENLFDDDVY 410
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYN 626
FTP G++ L +GAT VD+AY IH+E+GN M A++N L N ++VEIIT N
Sbjct: 411 AFTPNGDVIALARGATAVDFAYRIHSEVGNHMKGARINDKWSPLDQPLQNGDIVEIITAN 470
Query: 627 ALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+S + WL T SA+++I ++ +
Sbjct: 471 --NSHPSL----DWLNFVVTPSAKNRIRQWYK 496
>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
Length = 758
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 295/509 (57%), Gaps = 60/509 (11%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H GQ R+SGEP+I HP+ VA +L +L IAAG LHD VEDT+V
Sbjct: 44 LICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDV- 102
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T E IE+ FG+ VR +VEG TK+SK+ K K E+ +A++ R+MFLAM +++RVI
Sbjct: 103 TIEEIEQRFGSEVRCLVEGVTKLSKIN-FKSKTES------QAENFRRMFLAMAQDIRVI 155
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL +MP K+ ATET ++FAPLA LG+++ K ELE+L+F Y E
Sbjct: 156 VVKLADRLHNMRTLEYMPEEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPE 215
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
+ ++++ V++ + E+ L++ ++ L ++ + L +I K YSIY+ +
Sbjct: 216 AFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCL-----DISGRPKHLYSIYQKM 270
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ +E+ +A LRII++ + CY L +VH ++ PIP KDYI
Sbjct: 271 QRQNKEFHEIYDLAALRIIVQ------------TNEECYRALAVVHDVFRPIPGRFKDYI 318
Query: 448 ATPKPNGYQSLHTTLI-PFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGH 506
PKPN YQSLHT +I P+ LEVQIRT EM +AE GIAAH+
Sbjct: 319 GLPKPNRYQSLHTGVIGPWGRP----LEVQIRTMEMHHVAEYGIAAHWK----------- 363
Query: 507 ARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVF 566
+ G S G T + +WL + EWQ + ++E++++I +L ++
Sbjct: 364 YKETGGSHTGLTASDE------KFTWLRQLLEWQSDL---KDAQEYLESIKDNLFEEDIY 414
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT-- 624
VFTP+G++ L G+T VD+AY IHTE+GN+ +VNG +V + L N ++VEIIT
Sbjct: 415 VFTPKGDLVALKPGSTTVDFAYRIHTEVGNRCTGVRVNGRMVPLSTRLQNGDIVEIITQK 474
Query: 625 --------YNALSSKSAFQRHKQWLEHAK 645
N + + +A R KQW + ++
Sbjct: 475 NGHPSLDWLNFVRTSAAKNRIKQWYKRSR 503
>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
Length = 761
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 299/541 (55%), Gaps = 52/541 (9%)
Query: 121 AFKEDSPERLWEDLRPTISYLSPNELE--LVRRALMLAFEAHDGQKRRSGEPFIIHPVEV 178
AF + PE L + L P+E + L+ RA A++ H GQ R+SGEP+I HPV V
Sbjct: 16 AFDVELPEWLQKCLVAPQESHQPSEQDNSLICRAFSFAYDLHQGQYRKSGEPYICHPVAV 75
Query: 179 ARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLG-KLK 237
A +L +L IAAG LHD VEDT+V + E IE+ FG VR++VEG TK+S+ K
Sbjct: 76 AGLLRDLGGSSAMIAAGFLHDVVEDTDV-SIEDIEQRFGNEVRQLVEGVTKLSEFSQKFS 134
Query: 238 CKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETL 297
K E +A++ R+MFLAM +++RVI+VKLADRLHNMRTL H+ P KQ IA ET
Sbjct: 135 SKTER------QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQRRIALETR 188
Query: 298 QVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKK 357
++FAPLA LG+ + K ELE+L+F Y E Y +++ VA+ E L +L +
Sbjct: 189 EIFAPLANRLGIGRFKWELEDLAFKYLEPEAYRQIQDLVAEKRVNREARLTRVIDVLTAR 248
Query: 358 IEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGP 417
+E + + +I K Y IY+ + + + +E+ IA +RII+ K
Sbjct: 249 MEQAEIKCI-----DISGRPKHLYGIYQKMQRQQKEFHEIYDIAAIRIIVNTK------- 296
Query: 418 LCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQI 477
+ CY L VH + PIP KDYI PKPN YQSLHT ++ F LEVQI
Sbjct: 297 -----EECYRALAEVHDAFKPIPGRFKDYIGLPKPNRYQSLHTAVVGFTGRP---LEVQI 348
Query: 478 RTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR 537
RT EM +AE GIAAH+ + TG H++ + +WL I
Sbjct: 349 RTLEMHHVAEYGIAAHWKYK--ETGSSSHSQLKTSEE--------------KFTWLRQIL 392
Query: 538 EWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNK 597
EWQ + ++E++D++ +L V+VFTP+G++ +L GAT VD+AY IHTE+GN
Sbjct: 393 EWQNDLKDVNDAQEYLDSVKDNLFEDDVYVFTPKGDVVSLTAGATPVDFAYRIHTEVGNH 452
Query: 598 MVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 657
A+VN +V+ L N ++V+I+T +S + WL T A+++I ++
Sbjct: 453 CCGARVNERMVTLDTPLKNGDIVDILTQK--NSHPSL----DWLNFVVTTGAKNRIRQWY 506
Query: 658 R 658
+
Sbjct: 507 K 507
>gi|94989319|ref|YP_597420.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS9429]
gi|94993206|ref|YP_601305.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS2096]
gi|94542827|gb|ABF32876.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS9429]
gi|94546714|gb|ABF36761.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS2096]
Length = 743
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 22 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 81
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 82 DVVEDTDI-TLDEIEADFGHDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 133
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 134 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 193
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 194 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 247
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 248 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 295
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 296 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 350
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 351 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 392
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 393 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 452
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 453 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 489
>gi|418721778|ref|ZP_13280952.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|421095922|ref|ZP_15556630.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410361337|gb|EKP12382.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410741822|gb|EKQ90575.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|456889585|gb|EMG00473.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200701203]
Length = 674
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/554 (37%), Positives = 312/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ + L E +R T L + E V++A ++ AH GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I AGLLHD +EDT + I + FG + +VEG TK+SK+ ++ S
Sbjct: 66 GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS P KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y+IKSELE+L+F N E+Y +VK+ + E E +E IL++++ + Q
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ ++ K YSIY+ + + NE+ + +RII + + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIATPK N YQSLHTT+I LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + +P+ L+ N+ +R WL + WQ+
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +EFV+ + DL VFVFTP+GEI LPKGAT++D+A+ IHT++G K ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + +EIIT + + S WL +T SAR K+ + R
Sbjct: 434 RMLPLRTELRSGDQIEIIT-DKRTKPSPI-----WLRIVRTPSARQKLRSYFRKLKEENK 487
Query: 659 ---EQAALSASEIT 669
+Q A A+EIT
Sbjct: 488 KDLQQEAEFAAEIT 501
>gi|395240870|ref|ZP_10417894.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475652|emb|CCI87871.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 748
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/520 (38%), Positives = 295/520 (56%), Gaps = 57/520 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ +L V A A +AH+GQ R SG+P+IIHP +VA L L LD ++IAAG LHD
Sbjct: 22 YMNEEQLAFVEHAYDFANKAHEGQFRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHD 81
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
TVEDT VT + I+ FG V IV+G TK++K + S Q+ A++ R+M +A
Sbjct: 82 TVEDT-PVTNDDIKNIFGEDVAFIVDGVTKLNKY-------QYQSHQEFLAENHRKMLIA 133
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI+VKLADRLHNM TL H+ P KQ IA+ET+ ++APLA LG+ IK ELE++
Sbjct: 134 MAKDLRVIMVKLADRLHNMHTLEHLRPDKQRRIASETMDIYAPLADRLGIGSIKWELEDI 193
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
SF Y N + Y ++ + E E+ + +A ++ K LD + ++ +I K
Sbjct: 194 SFHYLNPDAYYRIVGLMDVKRSERERYISDAISVMKKT------LDSLGIQYQIYGRPKH 247
Query: 380 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 439
YSIYK ++ ++ + +R+++K + CY VLG VH W P+
Sbjct: 248 IYSIYKKMVNKHKDFEDIYDLLAVRVLVK------------NVRDCYAVLGAVHTEWKPM 295
Query: 440 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 499
P KDYIA PK NGYQSLHTT+I LE+QIRTE+M +AE G+AAH++ +
Sbjct: 296 PGRFKDYIAVPKVNGYQSLHTTIIG---PGGKPLEIQIRTEQMHEVAEYGVAAHWA---Y 349
Query: 500 VTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRD 559
G +P+ + L+ +RE E + EF+ ++ D
Sbjct: 350 KRGNFSGVKPSTSGEK-----------------LDMVREILELKDETKDADEFMRSVKSD 392
Query: 560 LLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEV 619
+ RV+VFTP+GE+ LPKG+ +D+AY IHT++G+ V AKVN LV + L N +V
Sbjct: 393 IFSDRVYVFTPKGEVYELPKGSVTLDFAYEIHTQVGSHAVGAKVNNKLVPLDYKLKNGDV 452
Query: 620 VEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+EI+T NA S+ W++ KT AR+KI ++ +
Sbjct: 453 IEIMTQSNATPSRD-------WVDIVKTSRARNKIRRYFK 485
>gi|116490651|ref|YP_810195.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni PSU-1]
gi|290890065|ref|ZP_06553148.1| hypothetical protein AWRIB429_0538 [Oenococcus oeni AWRIB429]
gi|419758622|ref|ZP_14284937.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB304]
gi|419857019|ref|ZP_14379733.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB202]
gi|419858563|ref|ZP_14381234.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184442|ref|ZP_15641865.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB318]
gi|421188651|ref|ZP_15645987.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB419]
gi|421193977|ref|ZP_15651217.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB553]
gi|421194238|ref|ZP_15651460.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB568]
gi|421197168|ref|ZP_15654348.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB576]
gi|116091376|gb|ABJ56530.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni PSU-1]
gi|290480256|gb|EFD88897.1| hypothetical protein AWRIB429_0538 [Oenococcus oeni AWRIB429]
gi|399904650|gb|EJN92103.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB304]
gi|399964824|gb|EJN99458.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB419]
gi|399967156|gb|EJO01639.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB318]
gi|399970443|gb|EJO04736.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB553]
gi|399975682|gb|EJO09718.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB576]
gi|399978250|gb|EJO12206.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB568]
gi|410498511|gb|EKP89961.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410498678|gb|EKP90126.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB202]
Length = 748
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 302/540 (55%), Gaps = 52/540 (9%)
Query: 129 RLWEDLRPT-ISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELEL 187
R +ED+ + YL+P++++ V A LA + H GQKR+SGE +I HP++VA IL +L++
Sbjct: 7 RSFEDVHDIYVKYLAPDQVKRVDSAYQLAKKMHAGQKRKSGEDYIYHPIQVAGILADLKM 66
Query: 188 DWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQD 247
D ++IAAG LHD VEDT T + I + +G V IV+G V+KLG++ + S ++
Sbjct: 67 DPDTIAAGFLHDVVEDTPE-TNDEIRQNYGDDVADIVDG---VTKLGRIHYE----STEE 118
Query: 248 VKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLL 307
A++ R++ LAM ++VRVIIVKLADRLHNMRTL P KQ IA+ETL ++APLA L
Sbjct: 119 NMAENHRKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRPEKQHRIASETLDIYAPLAHRL 178
Query: 308 GMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLM 367
G+ IK ELE+LS Y + ++Y ++ + + +E + ++ A K + K I DL
Sbjct: 179 GLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDADIASATKQIEKVIS-----DLK 233
Query: 368 TVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
E+ K YSIY+ + +E+ + +R+ L CY
Sbjct: 234 IGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRV------------LVDSVADCYA 281
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
LG +H W P+P KDYIA PKPNGYQSLHTT+I + LEVQIRT EM +AE
Sbjct: 282 ALGTIHANWKPLPGRFKDYIALPKPNGYQSLHTTIIG---PNGHPLEVQIRTFEMHQVAE 338
Query: 488 RGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNM 547
G+AAH++ + N S + V ++ LNAI+ E G
Sbjct: 339 FGVAAHWA-----------YKENKGSEKQARVSDSDQ------QHLNAIQGILELQEGAT 381
Query: 548 TSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNL 607
+ +FVDT+ DL RV+ FTP+G++ LP G+ +D A+ IH++IG V AKVNG +
Sbjct: 382 DAEQFVDTVKGDLFSDRVYAFTPKGDVFELPVGSKPIDMAFAIHSDIGLHTVGAKVNGKI 441
Query: 608 VSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASE 667
V + + ++VEI+T S R WL +R AR+KI + R+QA S E
Sbjct: 442 VPLDYEIQTGDIVEIVT----SPTPKVSR--DWLGLVASRRARNKIRAYFRQQARSSNIE 495
>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
Length = 750
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 318/592 (53%), Gaps = 83/592 (14%)
Query: 142 SPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTV 201
S + L+ RA A+ H+GQ R+SGEP+I HPV VA +L +L D +IAAG LHD V
Sbjct: 32 SNQDRNLICRAFNFAYNLHEGQYRKSGEPYIAHPVAVAGLLRDLGGDCVTIAAGFLHDIV 91
Query: 202 EDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMT 261
EDT++ T E+IEE FG VR +VEG TK+SK S ++ +A++ R+MFLAM
Sbjct: 92 EDTDI-TPEQIEEMFGFEVRCLVEGVTKLSKFN-------FSSTKERQAENFRRMFLAMA 143
Query: 262 EEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF 321
+++RVI+VKLADRLHNMRTL H+ P KQ IA ET ++FAPLA LG+ + K ELE+L F
Sbjct: 144 QDIRVIVVKLADRLHNMRTLEHLKPEKQRRIALETREIFAPLANRLGIGRFKWELEDLCF 203
Query: 322 MYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT-EIRSVCKEP 380
Y E Y +++ +++ + E +E+ L ++E+ + +K E++ K
Sbjct: 204 KYLEPEAYREIQSLISERRSDREARIEKVLDTLRSQMEN------LGIKILELKGRPKHL 257
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
Y IY+ + + + E+ IA +RII++ + CY L +VH + PIP
Sbjct: 258 YGIYQKMQRQQKKFEEIYDIAAIRIIVEAN------------EQCYRSLAVVHDAFKPIP 305
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYI PKPN YQSLHTT++ + LEVQIRT EM IAE GIAAH+ +
Sbjct: 306 GRFKDYIGLPKPNRYQSLHTTVVG---SNGRPLEVQIRTLEMHHIAEYGIAAHWKYK--- 359
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
G + N++ + +WL + EWQ++ ++E++D + +L
Sbjct: 360 -------------ETGSSEAPVNSDDE-KFTWLRQLLEWQKDL---KDAQEYIDNLKDNL 402
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTP G++ +L +G+T VD+AY IHTE+GN M A++N L N ++V
Sbjct: 403 FEDDVYVFTPNGDVISLARGSTPVDFAYRIHTEVGNHMKGARINDRWSVLDRSLENGDIV 462
Query: 621 EIIT----------YNALSSKSAFQRHKQW----------------LEHAKTRSARHKIM 654
EIIT N + + +A R +QW LE ++ +M
Sbjct: 463 EIITQKNSHPSLDWLNFVVTPTARNRIRQWYKRSHRDENLIRGKGLLEKGLGKTGFDSLM 522
Query: 655 KFLREQAALSASEITADTVGDFVADSGE-----ESEVEDLSDGSKQDKPLWE 701
K EQ L+A + TV D +A G V L D +K+ +P+ E
Sbjct: 523 K--SEQMQLTAQKCNYQTVDDLLAGLGYGEVTLNHVVNRLRDITKEQQPIEE 572
>gi|71911499|ref|YP_283049.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS5005]
gi|410681345|ref|YP_006933747.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes A20]
gi|417856072|ref|ZP_12501131.1| GTP pyrophosphokinase [Streptococcus pyogenes HKU QMH11M0907901]
gi|71854281|gb|AAZ52304.1| GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS5005]
gi|387933027|gb|EIK41140.1| GTP pyrophosphokinase [Streptococcus pyogenes HKU QMH11M0907901]
gi|395453251|dbj|BAM29590.1| GTP pyrophosphokinase [Streptococcus pyogenes M1 476]
gi|409693934|gb|AFV38794.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes A20]
Length = 739
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 54/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y++ ++ V +AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LH
Sbjct: 18 TYMTKADVAFVAKALAYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT++ T + IE +FG R IV+G V+KLGK++ K+ + A++ R+M +
Sbjct: 78 DVVEDTDI-TLDEIEADFGHDARDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLM 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
L+F Y N ++ K ++ + KE +E E + ++ K++ + + ++ K
Sbjct: 190 LAFRYLNETEFYK----ISHMMKEKRREREALVEAIVSKVK--TYTTQQGLFGDVYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT++M +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A A+ ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQAVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT+IG K AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEIIT + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIIT-----NANSFGPSRDWVKLVKTNKARNKIRQFFKNQ 485
>gi|225175541|ref|ZP_03729535.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
gi|225168870|gb|EEG77670.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
Length = 721
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 304/530 (57%), Gaps = 59/530 (11%)
Query: 133 DLRPTISYLSPNELELVR--RALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWE 190
+L+ I P E + R A A EAH GQKR SGE +I HP+ V+ IL ELE+D +
Sbjct: 5 ELKEKIKLYYPVEPDWSRLNEAYKFAVEAHQGQKRFSGELYITHPLGVSHILAELEMDMD 64
Query: 191 SIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKA 250
+I AGLLHD VEDT V T E IEE+FG + +V+G TK+SKL E S ++ +A
Sbjct: 65 TIVAGLLHDVVEDTEV-TLEDIEEKFGEEIAMLVDGVTKLSKL-------EYKSKEEHQA 116
Query: 251 DDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMY 310
++LR+MF+AM +++RV+++KLADR HNMRTL ++ KQ +I+ ETL+++APLA LG+Y
Sbjct: 117 ENLRKMFIAMAKDIRVLLIKLADRTHNMRTLKYLTSIKQQAISRETLEIYAPLAHRLGIY 176
Query: 311 QIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVK 370
+IK ELE+L+F + + Y + ++A +E E+ + + L K+ED + ++
Sbjct: 177 KIKWELEDLAFRFLERDRYYALVDKLAKKRQEREQFIGQIMDTLEPKLED------VGIQ 230
Query: 371 TEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLG 430
I K YSI + + + +E+ + +RII+ + CY LG
Sbjct: 231 AHISGRPKHLYSISQKMKEQGKEFHEIYDLTAIRIIV------------DSLKDCYGALG 278
Query: 431 LVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGI 490
+VH +W PIP KDYIA PKPN YQSLHT ++ E LEVQIRT EM AE GI
Sbjct: 279 IVHTLWKPIPGRFKDYIAMPKPNMYQSLHTLVMVGKNEL---LEVQIRTWEMHRTAEFGI 335
Query: 491 AAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSR 550
AAH+ R G ++ +I +++WL I E Q++ + +
Sbjct: 336 AAHW-----------------RYKEGD--IRDDDSIDNKLTWLRQIMELQQD---SKDAS 373
Query: 551 EFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
EF++ + DL VFVFTP+G++ +LP G+ +D+AY IHT+IG++ + A+VNG LV
Sbjct: 374 EFMENVKLDLFADEVFVFTPKGDVIDLPAGSIPLDFAYKIHTDIGHRCIGARVNGRLVPL 433
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L ++VE++T S + WL+ K+ AR KI + +++
Sbjct: 434 DYELKTGDIVEVMTAKQGSPS------RDWLKMVKSSGARAKIRTWFKKE 477
>gi|418735206|ref|ZP_13291618.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410749462|gb|EKR02354.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 674
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/554 (37%), Positives = 312/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ + L E +R T L + E V++A ++ AH GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I AGLLHD +EDT + I + FG + +VEG TK+SK+ ++ S
Sbjct: 66 GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS P KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y+IKSELE+L+F N E+Y +VK+ + E E +E IL++++ + Q
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ ++ K YSIY+ + + NE+ + +RII + + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIATPK N YQSLHTT+I LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + +P+ L+ N+ +R WL + WQ+
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +EFV+ + DL VFVFTP+GEI LPKGAT++D+A+ IHT++G K ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + +EIIT + + S WL +T SAR K+ + R
Sbjct: 434 RMLPLRTELRSGDQIEIIT-DKRTKPSPI-----WLRIVRTPSARQKLRSYFRKLKEENK 487
Query: 659 ---EQAALSASEIT 669
+Q A A+EIT
Sbjct: 488 KDLQQEAEFAAEIT 501
>gi|350566768|ref|ZP_08935408.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
gi|348661692|gb|EGY78374.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
Length = 493
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 303/523 (57%), Gaps = 61/523 (11%)
Query: 138 ISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGL 196
I + +PN E +R A +A + H+GQKR SGE +IIHP+ VA IL E+ +D +I AGL
Sbjct: 9 IKFYNPNANFEQIRLAFEIAKKNHEGQKRNSGEDYIIHPLNVAMILAEMNMDTPTIIAGL 68
Query: 197 LHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQM 256
LHDT+EDT V TFE +E+ FG + +V+G TK+ KL + Q+ +A+++R+M
Sbjct: 69 LHDTIEDTEV-TFEDVEKNFGIEIAYLVDGVTKLKKLNYK-------NKQEKQAENIRKM 120
Query: 257 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSEL 316
LAM +++RVIIVKLADRLHNMRTL +M K+ A ET++++AP+A LGM +IK EL
Sbjct: 121 VLAMAKDIRVIIVKLADRLHNMRTLEYMTDTKKHEKALETIEIYAPIADRLGMSKIKWEL 180
Query: 317 ENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRS 375
E+LS Y + + Y K + D+ + +E E+ N+I+ E Q L + + +I
Sbjct: 181 EDLSLRYIDPDKYYK----LVDMVNKRRQEREDLINRIIA---ELKQNLTKLGIVADING 233
Query: 376 VCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGI 435
K YSIYK + + E+ ++ +R+ L + CY VLG+VH +
Sbjct: 234 RPKNFYSIYKKMEYKGKNFEEIYDLSAVRV------------LVEDIKDCYGVLGVVHTL 281
Query: 436 WTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYS 495
W PIP KDYIA PKPN YQSLHTT+I E+ EVQIRT EM AE GIAAH+
Sbjct: 282 WKPIPGRFKDYIAMPKPNKYQSLHTTVIDNHGET---FEVQIRTYEMHQTAEYGIAAHWK 338
Query: 496 GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDT 555
+ V+ K+ + ++WL + EWQ++ +F++T
Sbjct: 339 YKAGVS---------------KSTSFDE-----NLTWLRQLLEWQKDLSD---PNDFMET 375
Query: 556 ITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLA 615
+ D VFVFTP+G++ NLP+G+T +D+AY IH+++GN AK+NG +VS + L
Sbjct: 376 LKVDFFADEVFVFTPQGDVINLPEGSTPLDFAYRIHSQVGNTCTGAKINGRIVSLDYKLK 435
Query: 616 NAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ +++E+IT N S S WL+ K+ A+ KI ++ +
Sbjct: 436 SGDIIEVIT-NPNSGPS-----HDWLKIVKSPQAKKKINQYFK 472
>gi|116328856|ref|YP_798576.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330538|ref|YP_800256.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121600|gb|ABJ79643.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124227|gb|ABJ75498.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 674
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/554 (37%), Positives = 312/554 (56%), Gaps = 71/554 (12%)
Query: 126 SPERLWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGEL 185
+ + L E +R T L + E V++A ++ AH GQ R SGEP+I+HP++V IL EL
Sbjct: 9 TKDMLLEGVRET---LGESAYESVQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYEL 65
Query: 186 ELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSV 245
LD + I AGLLHD +EDT + I + FG + +VEG TK+SK+ ++ S
Sbjct: 66 GLDEKVICAGLLHDVIEDTQYSRDDMIRD-FGEDITDLVEGVTKISKI-------KSQSK 117
Query: 246 QDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAK 305
+ A+++R++ +A +++RVI++KLAD+ HNMRTLS P KQ IA ETL ++AP+A
Sbjct: 118 ETEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAG 177
Query: 306 LLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLD 365
LG+Y+IKSELE+L+F N E+Y +VK+ + E E +E IL++++ + Q
Sbjct: 178 RLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQ--- 234
Query: 366 LMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQIC 425
++ ++ K YSIY+ + + NE+ + +RII + + C
Sbjct: 235 ---IEADVDGRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII------------TNEVKDC 279
Query: 426 YHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLI 485
Y VLG+VH +W P+P KDYIATPK N YQSLHTT+I LEVQIRT +M+ I
Sbjct: 280 YGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIG---PDGKPLEVQIRTRDMNDI 336
Query: 486 AERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVG 545
AE GIAAH+ + +P+ L+ N+ +R WL + WQ+
Sbjct: 337 AEYGIAAHW--------MYKEGKPS----------LSEKNVKVR--WLELLSSWQD---S 373
Query: 546 NMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNG 605
+ +EFV+ + DL VFVFTP+GEI LPKGAT++D+A+ IHT++G K ++NG
Sbjct: 374 ALDPKEFVEELKYDLHEDEVFVFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRING 433
Query: 606 NLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR------- 658
++ L + + +EIIT + + S WL +T SAR K+ + R
Sbjct: 434 RMLPLRTELRSGDQIEIIT-DKRTKPSPI-----WLRIVRTPSARQKLRSYFRKLKEENK 487
Query: 659 ---EQAALSASEIT 669
+Q A A+EIT
Sbjct: 488 KDLQQEAEFAAEIT 501
>gi|125717126|ref|YP_001034259.1| GTP pyrophosphokinase [Streptococcus sanguinis SK36]
gi|323353559|ref|ZP_08088092.1| GTP diphosphokinase [Streptococcus sanguinis VMC66]
gi|125497043|gb|ABN43709.1| GTP pyrophosphokinase, putative [Streptococcus sanguinis SK36]
gi|322121505|gb|EFX93268.1| GTP diphosphokinase [Streptococcus sanguinis VMC66]
Length = 739
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 305/527 (57%), Gaps = 55/527 (10%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L T YL+ ++ +++AL+ A + H GQ RRSGEP+I+HP++VA IL +L+LD ++A
Sbjct: 13 LALTRKYLAAEDVAFIQKALIYAIDCHSGQFRRSGEPYIVHPIQVAGILAKLKLDAVTVA 72
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
G LHD VEDT T + +E EFG VR IV+G V+KLGK+K K+ + A++
Sbjct: 73 CGFLHDVVEDTRA-TLDDLEREFGTDVRVIVDG---VTKLGKVKYKSHEEQL----AENH 124
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
R+M +AM+E++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +K
Sbjct: 125 RKMLMAMSEDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVK 184
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
ELE+LSF Y N ++ K+ + + +E E+ +EE + + + + + +I
Sbjct: 185 WELEDLSFRYLNEVEFYKISHMMKEKRREREELVEEVVQKI------ETYAGERNLHGKI 238
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
K YSIY+ + + +E+ + +R I+ Q Y +LG +H
Sbjct: 239 YGRPKHIYSIYRKMQDKKKRFDEIYDLIAIRCIL------------DTQSDVYAMLGYIH 286
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+W P+P KDYIA K NGYQS+HTT +Y +E QIRT+EM +AE G+AAH
Sbjct: 287 ELWRPMPGRFKDYIANRKANGYQSIHTT----VYGPKGPIEFQIRTKEMHEVAEYGVAAH 342
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
++ + V G V ++ A+ ++W+ + E Q++ + +++FV
Sbjct: 343 WAYKKGVKGQV-----------------DSKESAIGMNWIKELMELQDQ---SNNAKDFV 382
Query: 554 DTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHV 613
D++ L ++VFTP G +++LPK + +D+AY IHT++G K AKVNG +V T
Sbjct: 383 DSVKESYLAEEIYVFTPDGAVRSLPKDSGPIDFAYEIHTKVGEKATGAKVNGRMVPLTTK 442
Query: 614 LANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
L + VEIIT + ++F + WL KT AR+KI +F + Q
Sbjct: 443 LRTGDQVEIIT-----NANSFGPSRDWLNIVKTSKARNKIRQFFKNQ 484
>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
Length = 741
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 290/518 (55%), Gaps = 54/518 (10%)
Query: 141 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDT 200
SP+ +L+ RA + A++ H GQ R+SGEP+I HP+ VA IL L D +AAG LHD
Sbjct: 15 FSPDN-DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDI 73
Query: 201 VEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAM 260
+EDT+V T E +E FG VR +VEG TK+SK + + +A++ R+MFLAM
Sbjct: 74 IEDTDV-TPEELESHFGPEVRHLVEGVTKLSKFNF-------SNTTERQAENFRRMFLAM 125
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
+++RVI+VKLADRLHNMRTL M KQ SIA ET ++FAPLA LG+ ++K ELE+L+
Sbjct: 126 AQDIRVIVVKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLA 185
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F Y E Y +++ RVAD E++L IL ++E E+ K
Sbjct: 186 FKYIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGIRCY-----EVTGRPKHL 240
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
Y IYK + + +E+ IA LR+I++ + CY L +VH + PIP
Sbjct: 241 YGIYKKMQERHKQFHEIYDIAALRLIVE------------TNEECYRALAIVHDSYRPIP 288
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
KDYI PKPN YQSLHT +I + +EVQIRT EM +AE GIAAH+
Sbjct: 289 GRFKDYIGLPKPNRYQSLHTGVIG---NTGRPVEVQIRTVEMHHVAEYGIAAHWK----- 340
Query: 501 TGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDL 560
+ G S GK + + +WL + EWQ + ++E++DT+ +L
Sbjct: 341 ------YKETGGSEFGKLTETDE-----KFTWLRQLLEWQSDL---KDAQEYLDTVKNNL 386
Query: 561 LGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVV 620
V+VFTP G++ L GAT VD+AY +H+E+GN AKVN +V VL N ++V
Sbjct: 387 FDEDVYVFTPDGDVMALSNGATTVDFAYRVHSEVGNHCKGAKVNERMVPLDTVLKNGDIV 446
Query: 621 EIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
EI+T N S S WL +T +A+++I ++ +
Sbjct: 447 EILT-NKNSHPSL-----DWLNFVRTSTAKNRIRQWYK 478
>gi|24371957|ref|NP_715999.1| bifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT
[Shewanella oneidensis MR-1]
gi|24345803|gb|AAN53444.1| bifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT
[Shewanella oneidensis MR-1]
Length = 701
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 302/537 (56%), Gaps = 70/537 (13%)
Query: 130 LWEDLRPTIS-YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L+ + S YL P ++EL+++A +A +AH+GQ R SGEP+I HPV VARIL E+ LD
Sbjct: 3 LFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
E++ A LLHDT+EDT VT E + E FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 HETLMAALLHDTIEDT-YVTKEDLAERFGESVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AMT+++RVI++KLADR HNMRTL + P K+ IA ETL+++AP+A LG
Sbjct: 115 QAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQF--LDL 366
++ IK+ELE+L F + Y ++ RV KE K K L++ IE L+
Sbjct: 175 IHNIKTELEDLGF-----QAYYPMRYRV---LKEVVKAARGNRKELIQGIEAAVLTRLND 226
Query: 367 MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICY 426
+K +++ K YSIY + EV I R+I+ CY
Sbjct: 227 AGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIV------------DSIDTCY 274
Query: 427 HVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-----IPFLYESMFRLEVQIRTEE 481
VLG +HG++ P P KDYIA PK NGYQSLHT+L +P +E+QIRTE+
Sbjct: 275 RVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVP--------VEIQIRTED 326
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
MD +A++G+AAH++ + + +G T + W+ ++ E Q+
Sbjct: 327 MDQMADKGVAAHWA-----------YKGGAETGQGTTTQVRAR------KWMQSLLELQQ 369
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
TS EFV+ + +L ++VFTP G I LP AT VD+AY +HT++GN V A
Sbjct: 370 ---SASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGA 426
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+VN + L + + VEIIT +A WL T AR KI + L+
Sbjct: 427 RVNRQAYPLSQPLISGQTVEIITAKGARPNAA------WLNFVVTGKARAKIRQVLK 477
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,431,399,092
Number of Sequences: 23463169
Number of extensions: 511449977
Number of successful extensions: 1407517
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5594
Number of HSP's successfully gapped in prelim test: 1315
Number of HSP's that attempted gapping in prelim test: 1370850
Number of HSP's gapped (non-prelim): 8076
length of query: 820
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 669
effective length of database: 8,816,256,848
effective search space: 5898075831312
effective search space used: 5898075831312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)