BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003432
(820 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1
Length = 757
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/541 (40%), Positives = 327/541 (60%), Gaps = 66/541 (12%)
Query: 124 EDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
+DSPER PT+S P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA IL
Sbjct: 19 DDSPERH----PPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGIL 74
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
GEL+LD SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + +
Sbjct: 75 GELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASAS 129
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAP 302
S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++AP
Sbjct: 130 LSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAP 189
Query: 303 LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 362
LA LG+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 190 LANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE-- 247
Query: 363 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSP 421
+K E+ K YSIYK + KS+G ++++ I RII P
Sbjct: 248 ----RGLKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS--------- 293
Query: 422 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 481
CY LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT E
Sbjct: 294 ---CYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSE 347
Query: 482 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 541
M IAE GIAAH+ + GK V + + +WL + EWQ+
Sbjct: 348 MHKIAEEGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQ 387
Query: 542 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 601
+ +EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V A
Sbjct: 388 DL---KDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGA 444
Query: 602 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLRE 659
KVNG +V + + N + VE++T + Q+H K WL KT A+ +I F+++
Sbjct: 445 KVNGKIVPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQ 496
Query: 660 Q 660
Q
Sbjct: 497 Q 497
>sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis (strain 168) GN=relA
PE=3 SV=3
Length = 734
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 311/522 (59%), Gaps = 55/522 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
G A G A ++SW I E+Q E + + EF++++
Sbjct: 348 -----EGKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>sp|Q931Q4|RELA_STAAM GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=relA PE=3 SV=2
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA
PE=3 SV=1
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476)
GN=relA PE=3 SV=1
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252)
GN=relA PE=3 SV=1
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315)
GN=relA PE=1 SV=2
Length = 736
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 309/529 (58%), Gaps = 54/529 (10%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQ 311
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 312 IKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 371
IK ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 372 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 431
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 432 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 491
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 492 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 551
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 552 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 611
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 612 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q54089|RELA_STREQ Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Streptococcus
dysgalactiae subsp. equisimilis GN=relA PE=1 SV=1
Length = 739
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 306/522 (58%), Gaps = 56/522 (10%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVME------------TQSDVYAMVGYIHELWRP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK NGYQS+HTT +Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTT----VYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=relA PE=3 SV=1
Length = 729
Score = 337 bits (863), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=relA PE=3 SV=1
Length = 729
Score = 337 bits (863), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 296/503 (58%), Gaps = 54/503 (10%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 439 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 499 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 558
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 559 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 618
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 619 VVEIITYNALSSKSAFQRHKQWL 641
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT
PE=3 SV=1
Length = 760
Score = 335 bits (859), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 292/531 (54%), Gaps = 57/531 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H Q+R+SGEP+I HPV VA +L +L D IAAG LHD VEDT++
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI- 111
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
+ E+IE FG +VEG TK+SK S + +A++ R+MFLAM +++RVI
Sbjct: 112 SIEQIEALFGEETASLVEGVTKLSKFN-------FSSTTEHQAENFRRMFLAMAKDIRVI 164
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL + P KQ IA ET +FAPLA LG+++ K ELE+LSF Y +
Sbjct: 165 VVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPD 224
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 387
Y K++ V + + E LE +L ++ D+ E++ K Y IY +
Sbjct: 225 SYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHF-----ELQGRPKHLYGIYYKM 279
Query: 388 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 447
+ E+ IA LRII++ K CY L +VH ++ PIP KDYI
Sbjct: 280 TSQDKAFEEIYDIAALRIIVESKGE------------CYRALSVVHDVFKPIPGRFKDYI 327
Query: 448 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 507
PKPN YQSLHTT++ LE+QIRTEEM +AE GIAAH+
Sbjct: 328 GLPKPNRYQSLHTTVLGLTSRP---LEIQIRTEEMHHVAEYGIAAHWK-----------Y 373
Query: 508 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 567
+ +G S + + +WL + +WQ + ++E+V+ + ++L V+V
Sbjct: 374 KESGGSENATLTSTDE-----KFTWLRQLLDWQSDL---KDAQEYVENLKQNLFDDDVYV 425
Query: 568 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNA 627
FTP+GE+ +L +GAT VD+AY IHTE+G+ M A+VNG + L N ++VEI+T
Sbjct: 426 FTPKGEVISLARGATPVDFAYRIHTEVGHHMKGARVNGQWLGVDTRLKNGDIVEIVTQK- 484
Query: 628 LSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 674
+S + WL T SARH+I ++ R++ L E+ +G
Sbjct: 485 -NSHPSL----DWLNFVVTPSARHRIRQWFKRSRRDENILRGRELLEKELG 530
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 306/532 (57%), Gaps = 65/532 (12%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L EDL +S+ P E ++RA A E H QKR++GEP+IIHP+ VA L EL +D
Sbjct: 9 LEEDLEKLLSHY-PQHAEEIQRAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAELGMDH 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E+I A LLHDT+EDT+ T+E I+E FG V ++VEG V+K+GK+K K+E +
Sbjct: 68 ETIIAALLHDTLEDTDT-TYEEIKERFGERVAKLVEG---VTKIGKIKYKSE-------Q 116
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGM 309
A++ R++ LA E+ RVI++KL+DRL N++TL K+ IA ET++++APLA LG+
Sbjct: 117 AENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIYAPLAHRLGV 176
Query: 310 YQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMT 368
+ IK+ELE+ +F Y E+Y KV+ + KE K LEE K ++ K+ + L+
Sbjct: 177 WSIKNELEDWAFKYLYPEEYEKVR----NFVKESRKNLEEYLRKYVIPKVRKE--LEKYG 230
Query: 369 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 428
++ EI+ K YSI++ + + +V+ I +RII+ P CY V
Sbjct: 231 IEAEIKYRSKHYYSIWEKTRRKGIRLEDVHDILGVRIIVNTVPE------------CYTV 278
Query: 429 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 488
LG++H ++ P+P KDYI+ PKPN YQSLHTT+I + +E QIRT EM AE+
Sbjct: 279 LGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTVIA---DKGKLVEFQIRTWEMHERAEK 335
Query: 489 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 548
GIA+H+ A G++P V SWL RE E G+
Sbjct: 336 GIASHW------------AYKEGKNPSDAGVY----------SWL---RELVESIQGSTN 370
Query: 549 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 608
E ++ + +L VFVFTP+G++ LPKG+T VD AY IHTE+GN AK NG +V
Sbjct: 371 PSEVLENLKSNLFFEEVFVFTPKGDLVVLPKGSTPVDLAYKIHTEVGNHCAGAKSNGRIV 430
Query: 609 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
+ L + +VVEIIT N S S +WL KT AR+KI +FL++Q
Sbjct: 431 PLNYELKSGDVVEIIT-NPNKSPSY-----EWLSFVKTSRARNKIKQFLKKQ 476
>sp|Q9KNM2|SPOT_VIBCH Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=spoT PE=1 SV=1
Length = 705
Score = 322 bits (825), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 293/521 (56%), Gaps = 60/521 (11%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD
Sbjct: 14 YLTEPQIEALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEMRLDLETLQAALLHD 73
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+ED +V T E ++ FG++V +V+G VSKL KLK ++ ++ +A++ R+M LA
Sbjct: 74 VIEDCDV-TKEDLDAHFGSSVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLA 125
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENL 319
M +++RVI++KLADR NMRTL + P K+ IA ETL+++APLA LG++ IK+ELE L
Sbjct: 126 MVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHRLGIHNIKTELEEL 185
Query: 320 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 379
F Y +V + V + + KE ++++I + L V R V +E
Sbjct: 186 GFEALYPNRY-RVLKEVVKAARGNRKE-------MIQRIHSEIEGRLQEVGLPARVVGRE 237
Query: 380 P--YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 437
+SIY + + + I RI++ CY VLG VH ++
Sbjct: 238 KNLFSIYNKMKTKEQRFHTIMDIYAFRIVV------------DTADTCYRVLGQVHSLYK 285
Query: 438 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
P P MKDYIA PK NGYQSLHT+++ +EVQIRTE+MD +A++G+AAH+S +
Sbjct: 286 PRPARMKDYIAVPKANGYQSLHTSMVG---PHGVPVEVQIRTEDMDQMADKGVAAHWSYK 342
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 557
S RG T A W+ ++ E Q+ GN S EF++ +
Sbjct: 343 -------------ANSERGGTTAQIKAQ-----RWMQSLLELQQS-AGN--SFEFIENVK 381
Query: 558 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 617
DL ++VFTP+G I LP GAT VD+AY +HT+IGN V A+V+ + L +
Sbjct: 382 SDLFPDEIYVFTPKGRIVELPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSG 441
Query: 618 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ VEII+ +A WL + T AR KI + L+
Sbjct: 442 QTVEIISAPGARPNAA------WLNYVVTSRARTKIRQVLK 476
>sp|O51216|SPOT_BORBU Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=spoT PE=3 SV=1
Length = 667
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 309/542 (57%), Gaps = 69/542 (12%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y E + + +AL +A + H GQ R SGEP+IIHP+ V+ L + +LD+++ AGLLH
Sbjct: 30 TYKDEFERKSIFKALEIAEQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLH 89
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDTNV E I +EF + +++G TK+ L N+ S+++ A+ + +MF
Sbjct: 90 DVLEDTNVEK-EEIVKEFDEEILSLIDGVTKIHDLH-----NKTRSIKE--ANTISKMFF 141
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELEN 318
AMT ++R+II+KLAD+LHNM TLS++P ++Q IA + L + P+A+ LG+ +K+ LE+
Sbjct: 142 AMTHDIRIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLED 201
Query: 319 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 378
LSF + +DY ++K +++ E EK+L + K+ ++ L ++ EI K
Sbjct: 202 LSFKHLYPKDYKEIKNFLSETKIEREKKLYKG------KLSIEKELQKSGIEAEITVRSK 255
Query: 379 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 438
YSI++ K + N++ QI G+ +C Q+ CY +L +VH +W P
Sbjct: 256 HFYSIFR---KMQTRTNKLTQIFD---------TLGIRIICKKQKECYEILEIVHRVWKP 303
Query: 439 IPRAMKDYIATPKPNGYQSLHTTL-IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 497
IP +KDYIA+PK N YQSLHTT+ IP E +E+QIRTEEMD IA G+AAH+
Sbjct: 304 IPGRLKDYIASPKENKYQSLHTTVRIP---EDNQLIEIQIRTEEMDRIANYGVAAHW--- 357
Query: 498 VFVTGLVGHARPNGRSPRGKTVCLNNANIALR---ISWLNAIREWQEEFVGNMTSREFVD 554
+ I L+ +S++N I++WQ+E S+ ++
Sbjct: 358 -----------------------IYKEQIELKADDLSFINRIKKWQQESANK--SQYSMN 392
Query: 555 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 614
I ++LL + ++V+TP GE+ LP G+ +D+AY+IHT+IG++ + AK+NG + S T L
Sbjct: 393 DIHKELLNTFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITKPL 452
Query: 615 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL--REQAALSASEITADT 672
N ++VEI T SK + + WL +T+ AR KI +L + + I A
Sbjct: 453 KNEQIVEIFT-----SKDS-KPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDNNIIAYL 506
Query: 673 VG 674
VG
Sbjct: 507 VG 508
>sp|P0AG26|SPOT_SHIFL Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Shigella flexneri GN=spoT PE=3 SV=1
Length = 702
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 299/535 (55%), Gaps = 68/535 (12%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
++ IK+ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 369 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 488 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|P0AG24|SPOT_ECOLI Bifunctional (p)ppGpp synthase/hydrolase SpoT OS=Escherichia coli
(strain K12) GN=spoT PE=1 SV=1
Length = 702
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 299/535 (55%), Gaps = 68/535 (12%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
++ IK+ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 369 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 488 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|P0AG25|SPOT_ECO57 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1
Length = 702
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 299/535 (55%), Gaps = 68/535 (12%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLG 308
+A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 309 MYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 368
++ IK+ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 369 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 427
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 428 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 487
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 488 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 543
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 544 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 603
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 604 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 658
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rsh PE=1 SV=2
Length = 750
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 285/491 (58%), Gaps = 53/491 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHRSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL M K+ IA ET+ ++APLA +GM ++ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 385
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 386 AVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
++S+G S +++ I R+++ Q CY LGL+H W+ +P K
Sbjct: 246 K-MESKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFK 292
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 293 DYISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------I 340
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
R + +P K NA +WL R+ E+ EF++ +L +
Sbjct: 341 YKDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQ 391
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VF FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 392 VFCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIR 451
Query: 625 YNALSSKSAFQ 635
A +A++
Sbjct: 452 SKAQVPPAAWE 462
>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus biovar 1 (strain
9-941) GN=rsh PE=1 SV=1
Length = 750
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 281/490 (57%), Gaps = 51/490 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL M K+ IA ET+ ++APLA +GM ++ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 385
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 626 NALSSKSAFQ 635
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus (strain 2308) GN=rsh
PE=3 SV=1
Length = 750
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 281/490 (57%), Gaps = 51/490 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL M K+ IA ET+ ++APLA +GM ++ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 385
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 626 NALSSKSAFQ 635
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rsh PE=3 SV=1
Length = 750
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 281/490 (57%), Gaps = 51/490 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL M K+ IA ET+ ++APLA +GM ++ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 385
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 626 NALSSKSAFQ 635
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis biovar 1 (strain 1330)
GN=rsh PE=1 SV=1
Length = 750
Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 281/490 (57%), Gaps = 51/490 (10%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAE 327
+VKLADRLHNMRTL M K+ IA ET+ ++APLA +GM ++ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMCEDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 328 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 385
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 506 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 565
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 566 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 625
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 626 NALSSKSAFQ 635
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|P52560|RELA_STRCO GTP pyrophosphokinase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=relA PE=3 SV=1
Length = 847
Score = 302 bits (773), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 288/530 (54%), Gaps = 46/530 (8%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L + RA +A H GQKR+SG+P+I HP+ V IL EL +D ++ AGLLHDTVEDT
Sbjct: 124 LRQIERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTE 183
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
E + +FG V +V+G V+KL K+K + +A+ +R+M +AM ++ R
Sbjct: 184 Y-GLEDLRRDFGDVVTLLVDG---VTKLDKVKFG------EAAQAETVRKMVVAMAKDPR 233
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
V+++KLADRLHNMRT+ ++ KQ A ETL+++APLA LGM IK ELE+L+F
Sbjct: 234 VLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILY 293
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
+ Y ++ R VA E + +E ++ +++ D L +K + K YS+Y+
Sbjct: 294 PKMYDEIVRLVA----ERAPKRDEYLAVVTDEVQQD--LRAARIKATVTGRPKHYYSVYQ 347
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
++ E+ + +R+ L + CY LG VH W P+P KD
Sbjct: 348 KMIVRGRDFAEIYDLVGIRV------------LVDTVRDCYAALGTVHARWNPVPGRFKD 395
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PK N YQSLHTT+I +E+QIRT +M AE GIAAH+ +
Sbjct: 396 YIAMPKFNMYQSLHTTVI---GPGGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGAS 452
Query: 506 HARPNGRSPRGKTVC--LNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
R + GK+ LN+ ++WL + +WQ+E EF++++ DL +
Sbjct: 453 KVRTDAPKSSGKSKDDHLND------MAWLRQLLDWQKE---TEDPGEFLESLRFDLSRN 503
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
VFVFTP+G++ LP GAT VD+AY +HTE+G++ + A+VNG LV L N ++VE+
Sbjct: 504 EVFVFTPKGDVIALPAGATPVDFAYAVHTEVGHRTIGARVNGRLVPLESTLDNGDLVEVF 563
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 673
T A + + + WL K+ AR+KI + ++ A E D +
Sbjct: 564 TSKAAGAGPS----RDWLGFVKSPRARNKIRAWFSKERRDEAIEQGKDAI 609
>sp|O85709|RELA_STRAT GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3
SV=1
Length = 841
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 288/530 (54%), Gaps = 45/530 (8%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L + +A +A H GQKR+SG+P+I HP+ V IL EL +D ++ AGLLHD+ EDT
Sbjct: 121 LRQIEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDSREDTE 180
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
+ + +FG V +V+G V+KL K+K + +A+ +R+M +AM ++ R
Sbjct: 181 Y-GLDDLRRDFGDVVGLLVDG---VTKLDKVKFG------EAAQAETVRKMVVAMAKDPR 230
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
V+++KLADRLHNMRT+ ++ KQ A ETL+++APLA LGM IK ELE+L+F
Sbjct: 231 VLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILY 290
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
+ Y ++ R VA E + +E I+ +++ D L +K + K YS+Y+
Sbjct: 291 PKMYDEIVRLVA----ERAPKRDEYLAIVTDEVQSD--LRARRIKATVTGRPKHYYSVYQ 344
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
++ E+ + +R+ L + CY LG VH W P+P KD
Sbjct: 345 KIIVRGRDFAEIYDLVGIRV------------LVDTVRDCYAALGTVHARWNPVPGRFKD 392
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA PK N YQSLHTT+I + +E+QIRT +M AE GIAAH+ +
Sbjct: 393 YIAMPKFNMYQSLHTTVI---GPNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVARAS 449
Query: 506 HARPNGRSP-RGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
R + P +GK LN+ ++WL + +WQ+E EF++++ DL +
Sbjct: 450 KVRTDVPKPAKGKDDHLND------MAWLRQLLDWQKE---TEDPGEFLESLRFDLSRNE 500
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
VFVFTP+ ++ LP GAT VD+AY +HTE+G++ + A+VNG LV L N ++VE+ T
Sbjct: 501 VFVFTPKSDVIALPAGATPVDFAYAVHTEVGHRTIGARVNGRLVPLESTLDNGDLVEVFT 560
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVG 674
A + + + WL K+ AR+KI + ++ A E D +
Sbjct: 561 SKAAGAGPS----RDWLGFVKSPRARNKIRAWFSKERRDEAIEQGKDAIA 606
>sp|Q49640|RELA_MYCLE Probable GTP pyrophosphokinase OS=Mycobacterium leprae (strain TN)
GN=relA PE=3 SV=1
Length = 787
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 283/527 (53%), Gaps = 58/527 (11%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L +V+RA +A + H Q RRSG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 77 LSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTG 136
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM + R
Sbjct: 137 Y-TLEALSEEFGDEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDPR 186
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
V+++K+ADRLHNMRT+ +PP KQ+ A ETL+V APLA LGM +K ELE+LSF +
Sbjct: 187 VLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILH 246
Query: 326 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 385
+ Y ++ R VA + L + ++ L +K + K +SIY+
Sbjct: 247 PKKYEEIVRLVAGRAPSRDTYLAKVRAEIIST------LGASKIKATVEGRPKHYWSIYQ 300
Query: 386 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 445
++ ++++ + +RI LC + CY +G+VH +W P+ KD
Sbjct: 301 KMIVKGRDFDDIHDLVGIRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFKD 348
Query: 446 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 505
YIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 349 YIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW----------- 394
Query: 506 HARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 563
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 395 ----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQRE---AAEPGEFLESLRYDLAVQ 447
Query: 564 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 623
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N E VEI
Sbjct: 448 EIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEFVEIF 507
Query: 624 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL---REQAALSASE 667
T A ++ + + W + + A+ KI ++ R + AL A +
Sbjct: 508 TSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALEAGK 550
>sp|P66014|RELA_MYCTU Bifunctional (p)ppGpp synthase/hydrolase relA OS=Mycobacterium
tuberculosis GN=relA PE=1 SV=2
Length = 738
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 288/539 (53%), Gaps = 55/539 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L +++RA +A + H Q R+SG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 27 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDT 86
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM +
Sbjct: 87 GY-TLEALTEEFGEEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDP 136
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV+++K+ADRLHNMRT+ +PP KQ+ A ETL+V APLA LGM +K ELE+LSF
Sbjct: 137 RVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAIL 196
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ + Y ++ R VA + L + ++ + + +K + K +SIY
Sbjct: 197 HPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASK------IKATVEGRPKHYWSIY 250
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ ++ ++++ + +RI LC + CY +G+VH +W P+ K
Sbjct: 251 QKMIVKGRDFDDIHDLVGVRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFK 298
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 299 DYIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW---------- 345
Query: 505 GHARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 346 -----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQRE---AADPGEFLESLRYDLAV 397
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N EVVE+
Sbjct: 398 QEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEVVEV 457
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSG 681
T A ++ + + W + + A+ KI ++ ++ A E D + V G
Sbjct: 458 FTSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALETGKDAMAREVRRGG 512
>sp|P66015|RELA_MYCBO Probable GTP pyrophosphokinase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=relA PE=3 SV=1
Length = 790
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 288/539 (53%), Gaps = 55/539 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L +++RA +A + H Q R+SG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDT 138
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM +
Sbjct: 139 GY-TLEALTEEFGEEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDP 188
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV+++K+ADRLHNMRT+ +PP KQ+ A ETL+V APLA LGM +K ELE+LSF
Sbjct: 189 RVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAIL 248
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ + Y ++ R VA + L + ++ + + +K + K +SIY
Sbjct: 249 HPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASK------IKATVEGRPKHYWSIY 302
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ ++ ++++ + +RI LC + CY +G+VH +W P+ K
Sbjct: 303 QKMIVKGRDFDDIHDLVGVRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFK 350
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 351 DYIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW---------- 397
Query: 505 GHARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 562
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 398 -----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQRE---AADPGEFLESLRYDLAV 449
Query: 563 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 622
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N EVVE+
Sbjct: 450 QEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEVVEV 509
Query: 623 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSG 681
T A ++ + + W + + A+ KI ++ ++ A E D + V G
Sbjct: 510 FTSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALETGKDAMAREVRRGG 564
>sp|O34098|SPOT_SPICI Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Spiroplasma citri GN=spoT PE=3 SV=1
Length = 749
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 301/537 (56%), Gaps = 66/537 (12%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L+ +++A A E H GQ R SG +IIHP+ L + + +++ AGLLHD +EDT
Sbjct: 24 LKEIQKAYEYAEEKHHGQVRNSGARYIIHPLWTTFFLAQWRMGPKTLIAGLLHDVLEDTP 83
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
TFE ++E FG + +VEG TKVS K EN + +KA LR+++L+M +++R
Sbjct: 84 A-TFEELQELFGIEIANLVEGVTKVSYFAK-----ENRT--QIKAQYLRKLYLSMAKDIR 135
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTN 325
VIIVKLADRLHN++T+ ++ P +Q IA E+L++++ +A LGM +K E+E++SF N
Sbjct: 136 VIIVKLADRLHNLKTIGYLKPERQQIIARESLEIYSAIAHRLGMKAVKQEIEDISFKIIN 195
Query: 326 AEDYAKVKRRVADLYKEHE----KELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 381
Y K+ + KE E +++EE KIL+ + + M+VK RS K Y
Sbjct: 196 PVQYNKIVSLLESSNKERENTINQKIEELKKILITEKK-------MSVKVYGRS--KSIY 246
Query: 382 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 441
SIY+ + + + ++++ I +RII + V CY VLG VH +TP+
Sbjct: 247 SIYRKMNQFGKNFDDIHDILAVRII-----TNSVDD-------CYKVLGFVHQHYTPLNN 294
Query: 442 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 501
KDYIATPK N YQSLHTT++ + EVQIRTEEMD +AE+G+AAH+ +
Sbjct: 295 RFKDYIATPKHNLYQSLHTTIVA---DDGLIFEVQIRTEEMDELAEQGVAAHWRYK---- 347
Query: 502 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR-----EWQEEFVGNMTSREFVDTI 556
N + + +I RI L I E Q+E E + I
Sbjct: 348 -----EGENYDIAKKQKDIDERLDIFKRILDLENISVQERDEIQQEVYKPDHLMEQI--I 400
Query: 557 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP-THVLA 615
D+ S ++V TP G++ LP G+TV+D+AY IH+EIG K + AK+NG L SP + VL
Sbjct: 401 QNDIFSSLIYVLTPNGKVVTLPFGSTVLDFAYKIHSEIGEKTIGAKING-LFSPISTVLK 459
Query: 616 NAEVVEIITYNALSSKSAFQR-HKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 671
+ +VV+I T +A Q+ + WL +KT SA KI K+L+++ E+T+D
Sbjct: 460 SGDVVDIKT-------AATQKPNHSWLVVSKTSSALEKIKKYLKKELV----EVTSD 505
>sp|P43811|SPOT_HAEIN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=spoT PE=3 SV=1
Length = 677
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 290/534 (54%), Gaps = 69/534 (12%)
Query: 154 MLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIE 213
M+A +AH+GQ R SGEP+I HPV VA I+ +L LD E++ A LLHD +EDT T E+++
Sbjct: 1 MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTPY-TEEQLK 59
Query: 214 EEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLAD 273
EEFGA+V IV+G VSKL KLK + Q+ + ++ R+M LAMT ++RV+++KLAD
Sbjct: 60 EEFGASVAEIVDG---VSKLDKLKFRTR----QEAQVENFRKMILAMTRDIRVVLIKLAD 112
Query: 274 RLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVK 333
R HNMRTL + P K+ IA ETL+++ PLA LG+ IK+ELE+LSF + Y +V
Sbjct: 113 RTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRY-EVL 171
Query: 334 RRVADLYKEHEKEL-EEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRG 392
+++ D+ + + ++L E ++ + ++E+ + K Y IY+ +
Sbjct: 172 KKLVDVARSNRQDLIERISQEIKVRLENSGIF------ARVWGREKHLYKIYQKMRIKDQ 225
Query: 393 SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKP 452
+ + I R+I+K CY VLG +H ++ P P +KDYIA PK
Sbjct: 226 EFHSIMDIYAFRVIVKNV------------DDCYRVLGQMHNLYKPRPGRVKDYIAVPKA 273
Query: 453 NGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGR 512
NGYQSL T++I +EV I TE+M+ +AE GI AH+ + NG+
Sbjct: 274 NGYQSLQTSMIG---PKGVPVEVHIHTEDMEQVAEMGITAHWV-----------YKENGK 319
Query: 513 SPRGKTVCLNNANIALRIS-WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPR 571
+ ++ +R+ WL ++ E Q+ VGN S EF++ + + ++VFTP+
Sbjct: 320 N--------DSTTAQIRVQRWLQSLVEIQQS-VGN--SFEFIENVKSEFFPKEIYVFTPK 368
Query: 572 GEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSK 631
G I LP GAT VD+AY +H+++GN V V + L + + V IIT +
Sbjct: 369 GRIVELPMGATAVDFAYAVHSDVGNTCVGVTVEHKPYPLSKALESGQTVNIITDPNAHPE 428
Query: 632 SAFQRHKQWLEHAKTRSARHKIMKFLR---EQAALSASEITADT------VGDF 676
A WL T A+ +I +L+ E+ A+ E+ + +GDF
Sbjct: 429 VA------WLNFVVTARAKTRIRHYLKQRCEEDAVKLGEVELNVALQPHNLGDF 476
>sp|O87331|RELA_CORGL GTP pyrophosphokinase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=relA PE=3 SV=2
Length = 760
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 283/516 (54%), Gaps = 55/516 (10%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+++++ RA A HDG R+SG+P+I HP+ VA I E+ +D ++ A LLHDTVEDT
Sbjct: 51 DVQVLERAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDT 110
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ + + + +FG V R+V+G TK+ K+ L E A+ +R+M +AM+++
Sbjct: 111 DY-SLDDLTRDFGEEVARLVDGVTKLDKVA-LGAAAE--------AETIRKMIVAMSQDP 160
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYT 324
RV+++K+ADRLHNMRT+ +PP KQ+ A +TL+V APLA LGM +K ELE+LSF
Sbjct: 161 RVLVIKVADRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAIL 220
Query: 325 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 384
+ Y ++ R VAD ++ L+E + + ++ + E+ K +SIY
Sbjct: 221 YPKKYEEIVRLVADRAPSRDRYLKEIIDQVTGGLRENN------IAAEVLGRPKHYWSIY 274
Query: 385 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 444
+ ++ +++ + +RI++ CY +G+VH ++ +P K
Sbjct: 275 QKMIVRGRDFDDIFDLVGIRILV------------DNVNNCYAAIGVVHSLFNALPGRFK 322
Query: 445 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 504
DYI+ P+ YQSLHTT+ + LEVQ RT +M AE GIAAH+
Sbjct: 323 DYISAPRFGVYQSLHTTV---MGPGGKPLEVQARTHDMHYNAEFGIAAHW---------- 369
Query: 505 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 564
+ S G+ ++ +++W+ + +WQ+E EF+D++ DL +
Sbjct: 370 -RYKETKGSHSGEQAEVD------QMAWMRQLLDWQKE---AADPNEFLDSLRYDLTSKQ 419
Query: 565 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
+FVFTP+G++ NLP +T VD+AY +HTE+G++ + AK+NG LV+ L + + VE+ T
Sbjct: 420 IFVFTPKGDVVNLPVNSTPVDFAYAVHTEVGHRCIGAKINGKLVALETKLKSGDRVEVFT 479
Query: 625 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 660
++ + + W E + A+ KI ++ ++
Sbjct: 480 SKDQNAGPS----RGWQEFVVSPRAKAKIRQWFAKE 511
>sp|P0AG23|RELA_SHIFL GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1
Length = 744
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 53/489 (10%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 651
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 652 KIMKFLREQ 660
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG20|RELA_ECOLI GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=1
SV=1
Length = 744
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 53/489 (10%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 651
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 652 KIMKFLREQ 660
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG21|RELA_ECOL6 GTP pyrophosphokinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=relA PE=3 SV=1
Length = 744
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 53/489 (10%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 651
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 652 KIMKFLREQ 660
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG22|RELA_ECO57 GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1
Length = 744
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 251/489 (51%), Gaps = 53/489 (10%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATE 295
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++ A E
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 296 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 355
++APLA LG+ Q+K ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 356 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 415
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 416 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 475
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 476 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 535
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 536 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 595
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 596 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 651
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 652 KIMKFLREQ 660
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P55133|RELA_PHOAS GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG
15956) GN=relA PE=3 SV=1
Length = 744
Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 251/476 (52%), Gaps = 51/476 (10%)
Query: 150 RRALMLAFEAHDGQKRRSGEPFII-HPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
+R + LA E +G P ++ E+ IL L +D +++ A LL+ VE T
Sbjct: 39 QRCIELAAEQENG-------PLLLWRGRELVEILVTLSMDADTLIAALLYPLVEGGCYST 91
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
+ ++EE+ T+ +V+G ++ + +LK E + Q + D++R+M L+M ++ R ++
Sbjct: 92 -DALKEEYSGTILHLVQGVEQMCAISQLKSTAEE-TAQAAQVDNIRRMLLSMVDDFRCVV 149
Query: 269 VKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAED 328
+KLA+R+ N+R + P + + A E ++APLA LG+ Q+K E+E+ +F Y + +
Sbjct: 150 IKLAERICNLREVKDQPDEVRRAAAQECANIYAPLANRLGIGQLKWEIEDYAFRYQHPDT 209
Query: 329 YAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVL 388
Y ++ ++++ E+ ++ + I + + ++ E++ K YSI++ +
Sbjct: 210 YKQIAKQLS------ERRIDREDYITHFVDDLSDAMKASNIRAEVQGRPKHIYSIWRKMQ 263
Query: 389 KSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIA 448
K +E+ + +RI+ Q CY LG+VH + +P+ DY+A
Sbjct: 264 KKSLEFDELFDVRAVRIV------------AEELQDCYAALGVVHTKYRHLPKEFDDYVA 311
Query: 449 TPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHAR 508
PKPNGYQS+HT ++ ++ +E+QIRT++M +E G+AAH+ +
Sbjct: 312 NPKPNGYQSIHTVVLGPEGKT---IEIQIRTKQMHEESELGVAAHWKYK----------- 357
Query: 509 PNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVF 568
G + G + +I+WL + WQEE S E +D + + RV+ F
Sbjct: 358 -EGTASGGAQSAYDE-----KINWLRKLLAWQEEM---SDSGEMLDELRSQVFDDRVYAF 408
Query: 569 TPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
TP+G++ +LP AT +D+AY IH+E+G++ + AKV G +V T+ L + VEIIT
Sbjct: 409 TPKGDVVDLPSNATPLDFAYHIHSEVGHRCIGAKVEGRIVPFTYHLQMGDQVEIIT 464
>sp|P44644|RELA_HAEIN GTP pyrophosphokinase OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=relA PE=3 SV=1
Length = 743
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 255/487 (52%), Gaps = 52/487 (10%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL EL +D E++ +L V + + +E ++E+FGA + ++++G ++ + +
Sbjct: 63 VEMVEILHELNMDAETLLTAMLFPIVAN-KLTDWESLKEKFGAKITKLLKGVLEMDNIRQ 121
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIAT- 294
L N +HS ++ D++R+M LAM ++ R +I+KLA+R+ +R H + +A
Sbjct: 122 L---NASHSANALQVDNVRRMLLAMVDDFRCVIIKLAERITFLRDAEHRCAEEDKVLAVK 178
Query: 295 ETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 354
E ++APLA LG+ Q+K ELE+ F Y + E Y R +A L +E + L+ + I
Sbjct: 179 ECSYIYAPLANRLGIGQLKWELEDYCFRYLHPEQY----RAIAKLLQE--RRLDREHYIA 232
Query: 355 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSG 414
E +L + E+ K YSI++ + K + + + +RII++
Sbjct: 233 DFVSELSGYLRENIEQVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQK----- 287
Query: 415 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 474
Q CY LG+VH + +P+ DY+A PKPNGYQS+HT + L + +E
Sbjct: 288 -------LQDCYTALGIVHTQFKHLPKEFDDYVANPKPNGYQSIHTVV---LGKGGKPIE 337
Query: 475 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 534
VQIRT++M AE G+AAH+ + TG + +I+WL
Sbjct: 338 VQIRTQQMHDDAELGMAAHWKYKEGNTGSMSAYEE-------------------KIAWLR 378
Query: 535 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 594
+ WQ++ S E + + + RV+VFTP+GE+ +LP G+T +D+AY IH+EI
Sbjct: 379 KLLAWQDDIT---DSGEVLAELRSQVFDDRVYVFTPKGEVVDLPTGSTPLDFAYAIHSEI 435
Query: 595 GNKMVAAKVNGNLVSPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKI 653
G++ + AKV G +V T+ L + ++IIT N S+ + + AK+R+ KI
Sbjct: 436 GHRCIGAKVAGRIVPFTYQLQMGDQIDIITQKNPNPSRDWLNPNLGFTHTAKSRA---KI 492
Query: 654 MKFLREQ 660
+ ++Q
Sbjct: 493 QAWFKKQ 499
>sp|P75386|SPOT_MYCPN Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129)
GN=spoT PE=3 SV=1
Length = 733
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 265/539 (49%), Gaps = 62/539 (11%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L+ T +P + L+ +AL + + H QKR SGEPF IHP+ A L E +D ++
Sbjct: 25 LQKTAQKFAPEVVALITKALDYSKKWHGEQKRLSGEPFFIHPLRTALRLVEWNMDSNTVC 84
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
AGLLHD +EDT V T + FG + +V TK++ K K + N +D+ L
Sbjct: 85 AGLLHDIIEDTQV-TEADLTAIFGKEITDLVVKVTKITSESK-KQRQLNRKKEDLNLKSL 142
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIK 313
+ ++ +EV +++KLADRL N+ ++ + KQ IA ETL+++A +A +GMY +K
Sbjct: 143 VNIAMSSQQEVNALVLKLADRLDNISSIEFLAVEKQKIIAKETLELYAKIAGRIGMYPVK 202
Query: 314 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 373
++L +LSF + +++ ++ ++ E K L + +E +Q ++ +
Sbjct: 203 TQLADLSFKVLDPKNFNNTLSKINQQKVFYDNEWGNFKKQLEEMLEQNQ------IEYRL 256
Query: 374 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 433
S K YS Y+ + +I +++ + +R+I+K + CYH+LGL+H
Sbjct: 257 ESRIKGIYSTYQKLTFHEQNIAKIHDLFAIRLIVKSELD------------CYHLLGLIH 304
Query: 434 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 493
+T + + KDYIA+PK N YQS+HTT + +E+QIRT+ MD +++ G A+H
Sbjct: 305 LNFTVLMKHFKDYIASPKQNFYQSIHTT----VRLKGLNVEIQIRTQRMDHVSKYGFASH 360
Query: 494 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 553
+ + GL+ AL++++LN+ M SR+F
Sbjct: 361 WIYKEKKEGLLAS--------------------ALQVNYLNS---------KQMHSRDFF 391
Query: 554 DTIT-RDLLGSRVFVFTPRGEIK--NLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 610
I D++ V +K N+ + ++D AY ++ + NK+ K++G V
Sbjct: 392 KRIFGTDIIKVNVSSDNEPNIVKKLNVESNSKLLDIAYELYPKQFNKLEKIKLDGVEVMS 451
Query: 611 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE-QAALSASEI 668
V A E+V + ++ ++WL + R ++ K L + + A+ SE+
Sbjct: 452 FDVTAENEMVIEFCFGKTNNLK-----RRWLRYMNNHVFRERVKKDLNKLKKAVKYSEL 505
>sp|P47520|SPOT_MYCGE Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=spoT PE=3 SV=1
Length = 720
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 199/367 (54%), Gaps = 32/367 (8%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E+EL+ +A A H+ QKR SGEPF IHP+ A L E +D +I AGLLHD +EDT
Sbjct: 23 EIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVEWNMDPITICAGLLHDIIEDT 82
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGK----LKCKNENHSVQDVKADDLRQMFLAM 260
+ T I F + +V TK++ K LK K EN +++ + +
Sbjct: 83 DQ-TEANIAMIFSKEIAELVTKVTKITNESKKQRHLKNKKENLNLKS-----FVNIAINS 136
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLS 320
+E+ V+++KLADRL N+ ++ +P KQ IA ETL+++A +A +GMY +K++L +LS
Sbjct: 137 QQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETLELYAKIAGRIGMYPVKTKLADLS 196
Query: 321 FMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEP 380
F + ++Y ++ ++ E + + L K + +Q ++ ++ S K
Sbjct: 197 FKVLDLKNYDNTLSKINKQKVFYDNEWDNFKQQLKKILAQNQ------IEYQLESRIKGI 250
Query: 381 YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIP 440
YS YK + +I++++ + +R+I K + CYH+LGL+H +
Sbjct: 251 YSTYKKLTVHEQNISKIHDLFAIRLITKSELD------------CYHILGLIHLNFLIDS 298
Query: 441 RAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFV 500
+ KDYIA+PK N YQS+HTT + +E+QIRT++MD +++ G+A+H+ +
Sbjct: 299 KYFKDYIASPKQNLYQSIHTT----VRLKGLNVEIQIRTQQMDNVSKFGLASHWIYKEQK 354
Query: 501 TGLVGHA 507
GL+ A
Sbjct: 355 EGLLAPA 361
>sp|Q568P1|MESH1_DANRE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Danio rerio GN=hddc3 PE=2 SV=1
Length = 180
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 155 LAFEAHDGQKRRS--GEPFIIHPVEVARIL---GELELDWESIAAGLLHDTVEDTNVVTF 209
A E H Q+ + G P+I HP+ VARIL GE+ D E I A LLHDTVEDT+ TF
Sbjct: 15 FAAEKHRNQRHKDPEGTPYINHPIGVARILSHEGEI-TDVEVIQAALLHDTVEDTDT-TF 72
Query: 210 ERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIV 269
E +E FGATV RIV+G T L K + + + Q+ A + +V
Sbjct: 73 EELESVFGATVARIVQGVTDDKSLPKAERERQ-------------QVEHAPHCSHQAKLV 119
Query: 270 KLADRLHNMRTLSHMPP 286
KLAD+L+N+R L+ P
Sbjct: 120 KLADKLYNLRDLNRCTP 136
>sp|Q28C98|MESH1_XENTR Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Xenopus tropicalis GN=hddc3 PE=2 SV=1
Length = 179
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 148 LVRRALMLAFEAHDGQKRRSGE--PFIIHPVEVARILGELE--LDWESIAAGLLHDTVED 203
L+ A A E H Q+R+ E P+I HP+ VARIL D + A LLHDTVED
Sbjct: 7 LILEAANFAAEKHKQQRRKDPEKTPYINHPLGVARILSHEGGITDTAVLQAALLHDTVED 66
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
TN TFE IE FG VR IVE T L K++ K QM A
Sbjct: 67 TNT-TFEEIELHFGQDVRNIVEEVTDDKTLPKMERKR-------------LQMEHAPHCS 112
Query: 264 VRVIIVKLADRLHNMRTLSHMPP 286
+ +VKLAD+L+N+R L P
Sbjct: 113 QKAKLVKLADKLYNLRDLKRCTP 135
>sp|Q9D114|MESH1_MOUSE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Mus musculus GN=Hddc3 PE=2 SV=1
Length = 179
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 157 FEAHDGQKRR----SGEPFIIHPVEVARILGELE--LDWESIAAGLLHDTVEDTNVVTFE 210
F AH +++R G P+I HP+ VARIL D + A LLHDTVEDT+ T +
Sbjct: 14 FAAHKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDT-TLD 72
Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
+E FGA VRR+VE T L KL+ K + Q+ A +VK
Sbjct: 73 EVELHFGAQVRRLVEEVTDDKTLPKLERKRQ-------------QVEQAPHSSPGAKLVK 119
Query: 271 LADRLHNMRTLSHMPP 286
LAD+L+N+R L+ P
Sbjct: 120 LADKLYNLRDLNRCTP 135
>sp|Q8N4P3|MESH1_HUMAN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Homo sapiens GN=HDDC3 PE=1 SV=3
Length = 179
Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 155 LAFEAHDGQKRR--SGEPFIIHPVEVARILGELE--LDWESIAAGLLHDTVEDTNVVTFE 210
A H Q+R+ G P+I HP+ VARIL D + A LLHDTVEDT+ T +
Sbjct: 14 FAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDT-TLD 72
Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
+E FGA VRR+VE T L KL+ K Q+ A +VK
Sbjct: 73 EVELHFGAQVRRLVEEVTDDKTLPKLERKR-------------LQVEQAPHSSPGAKLVK 119
Query: 271 LADRLHNMRTLSHMPPHKQS 290
LAD+L+N+R L+ P S
Sbjct: 120 LADKLYNLRDLNRCTPEGWS 139
>sp|P29941|YCB8_PSEDE Uncharacterized 19.2 kDa protein in cobO 3'region OS=Pseudomonas
denitrificans PE=4 SV=1
Length = 175
Score = 67.0 bits (162), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 146 LELVRRALMLAFEAHDGQKRR-SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++L AL A AH QKR+ G P+I+HP+ VA I+ + E IAA LLHDTVEDT
Sbjct: 11 IDLENSALQFATRAHGEQKRKYDGRPYIVHPIAVAEIVRSVPHTPEMIAAALLHDTVEDT 70
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ E I+E FG V +V T +S H + V+ + RQ +
Sbjct: 71 DATLLE-IKEAFGPKVATLVAWLTDIS--------TPFHGNRQVRKELDRQHLASAPAAA 121
Query: 265 RVIIVKLADRLHN 277
+ VKLAD + N
Sbjct: 122 KT--VKLADLIDN 132
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 44/332 (13%)
Query: 174 HPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL 233
+P ++ I L+LD S A LLH+ ++ N+ E++ I+ ++KL
Sbjct: 29 YPDQIHTITKALQLDSSSFTAVLLHENIQHLNL-------EDYNHFNNNIIYLVDVINKL 81
Query: 234 GKLKCKNENHSVQDVKADDLRQMFLAMTEEVR--VIIVKLADRLHNMRTLSHMPPHKQSS 291
+ K ++ Q + ++ L + +++ I+ L LH + + + +
Sbjct: 82 STIHYKP--YAEQYIH---FHELLLTINPKLQETAILTSLVPLLHKVSIFNLEYNNTNAQ 136
Query: 292 IATETL-QVFAP-LAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 349
+E + + P L + L++L F E+ ++ + LY + +
Sbjct: 137 HISEIITNCYIPYLLSYTAHNDLAYLLQDLCFKIQYPEERNRILHYMYWLYPDIDN---- 192
Query: 350 ANKILMKKIEDDQFLDL---MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRII 406
++ IE QF ++ + +K + K PYSI+ L I +N I R I
Sbjct: 193 ----IIHNIEQ-QFGNIFRKLNIKASLSYRIKSPYSIWIKTLVKDIHITALNDILAFRAI 247
Query: 407 IKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFL 466
+ K CY V L+H + I DYI PK NGYQS+H +
Sbjct: 248 VPNKKA------------CYDVSKLIHLHYNTITSQFVDYIRYPKNNGYQSIHLVISG-- 293
Query: 467 YESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 498
+ +E+QIR+ M + G +AH++ +V
Sbjct: 294 -GNKGNIELQIRSTTMHRQTQYG-SAHHTYKV 323
>sp|Q9VAM9|MESH1_DROME Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Drosophila melanogaster GN=Mesh1 PE=1 SV=1
Length = 179
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 153 LMLAFEAHDGQKRRSGE--PFIIHPVEVARILG--ELELDWESIAAGLLHDTVEDTNVVT 208
L A H Q+R+ + P++ H + V+ IL D + A LLHD VEDT+ +
Sbjct: 13 LQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDA-S 71
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
FE +E+ FG V +V T L K + K Q+ A R +
Sbjct: 72 FEDVEKLFGPDVCGLVREVTDDKSLEKQERKR-------------LQIENAAKSSCRAKL 118
Query: 269 VKLADRLHNMRTLSHMPP 286
+KLAD+L N+R L P
Sbjct: 119 IKLADKLDNLRDLQVNTP 136
>sp|P39583|YWAC_BACSU GTP pyrophosphokinase YwaC OS=Bacillus subtilis (strain 168)
GN=ywaC PE=1 SV=1
Length = 210
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 412 CSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL-IPFLYES- 469
+GV +CS Y+V+ ++ +KDYI TPKPNGY+SLH + +P +
Sbjct: 88 IAGVRIICSFISDIYNVVNVLKQHEDLRIVKVKDYIQTPKPNGYRSLHLIIEMPVNLTNR 147
Query: 470 --MFRLEVQIRTEEMDLIA 486
+ E+QIRT MD A
Sbjct: 148 VEYVKAEIQIRTIAMDFWA 166
>sp|B5EBX9|SYT_GEOBB Threonine--tRNA ligase OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=thrS PE=3 SV=1
Length = 636
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V P G + LP GA++ D A I + +A K++GNLV LA+ VEIIT
Sbjct: 6 VTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEIIT 63
>sp|Q03RK3|SYT_LACBA Threonine--tRNA ligase OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=thrS PE=3 SV=1
Length = 647
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 570 PRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALS 629
P G +K P G T D A I + K VAAK++G LV LA+ +EI+T ++
Sbjct: 9 PDGAVKAFPAGTTPADVAKSISISLAKKAVAAKLDGQLVDYLTPLASDGSIEIVTKDSDD 68
Query: 630 SKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSGEESEV 686
+ + T +A +I +E A+ +++AD G FV ++ +V
Sbjct: 69 GLTVLR---------NTTAALLRI-ALKKEFPAIRLGKVSADEDGFFVDTDKDDQQV 115
>sp|C6DYJ5|SYT_GEOSM Threonine--tRNA ligase OS=Geobacter sp. (strain M21) GN=thrS PE=3
SV=1
Length = 636
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 567 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 624
V P G + LP GA++ D A I + +A K++GNLV LA+ VEI+T
Sbjct: 6 VTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEIVT 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 295,796,420
Number of Sequences: 539616
Number of extensions: 12327844
Number of successful extensions: 34512
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 34112
Number of HSP's gapped (non-prelim): 194
length of query: 820
length of database: 191,569,459
effective HSP length: 126
effective length of query: 694
effective length of database: 123,577,843
effective search space: 85763023042
effective search space used: 85763023042
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)