BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003438
(820 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 197/349 (56%), Gaps = 39/349 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY V ++G G+FGQV K +D +++ VA+K+++N+ +++QA E+ IL L K+ D++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ-DKD 156
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
+ +++ + E F + H+C+ FELL NLYELIK N F+G SL +V+ F+ IL+ L L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQ 289
IIHCDLKPENILL + IK+IDFGS+C E + VY+ IQSR+YR+PEV+LG +
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGAR 275
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFK 349
Y IDMWS GCI+AEL G PL PG E D L MI +LG P +L +K F
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGM-PSQKLLDASKRAKNFVS 334
Query: 350 CIG-----SVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN 404
G +V + +G V + G + + E+RE L G +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG-------------CD 381
Query: 405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
P +DFLK +E+DPA R +P QA RHP++
Sbjct: 382 DP------------------LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 197/349 (56%), Gaps = 39/349 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY V ++G G+FGQV K +D +++ VA+K+++N+ +++QA E+ IL L K+ D++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ-DKD 156
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
+ +++ + E F + H+C+ FELL NLYELIK N F+G SL +V+ F+ IL+ L L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQ 289
IIHCDLKPENILL + IK+IDFGS+C E + VY+ IQSR+YR+PEV+LG +
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGAR 275
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFK 349
Y IDMWS GCI+AEL G PL PG E D L MI +LG P +L +K F
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGM-PSQKLLDASKRAKNFVS 334
Query: 350 CIG-----SVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN 404
G +V + +G V + G + + E+RE L G +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG-------------CD 381
Query: 405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
P +DFLK +E+DPA R +P QA RHP++
Sbjct: 382 DP------------------LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 166/242 (68%), Gaps = 5/242 (2%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY + L+G G+FGQV K +D +VA+KIIKN+ A+ QA +EV +L +NK +D E
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK-HDTE 94
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
K++IV + +F+ + HLC+ FE+L NLY+L++ +FRG+SL++ + F++Q+ L L
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 230 K--DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG 287
+ IIHCDLKPENILLC + A IKI+DFGS+C + +Y IQSR+YRSPEVLLG
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 213
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347
Y AIDMWS GCI+ E+ G PLF GA+E D + +++ +LG PP ++L +A KF
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI-PPAHILDQAPKARKF 272
Query: 348 FK 349
F+
Sbjct: 273 FE 274
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 195/349 (55%), Gaps = 39/349 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY V ++G G FGQV K +D +++ VA+K+++N+ +++QA E+ IL L K+ D++
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ-DKD 156
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
+ +++ + E F + H+C+ FELL NLYELIK N F+G SL +V+ F+ IL+ L L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQ 289
IIHCDLKPENILL + IK+IDFGS+C E + VY IQSR+YR+PEV+LG +
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGAR 275
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFK 349
Y IDMWS GCI+AEL G PL PG E D L MI +LG P +L +K F
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGM-PXQKLLDASKRAKNFVS 334
Query: 350 CIG-----SVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN 404
G +V + +G V + G + + E+RE L G +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG-------------CD 381
Query: 405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
P +DFLK +E+DPA R +P QA RHP++
Sbjct: 382 DP------------------LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 166/242 (68%), Gaps = 5/242 (2%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY + L+G G+FGQV K +D +VA+KIIKN+ A+ QA +EV +L +NK +D E
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK-HDTE 113
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
K++IV + +F+ + HLC+ FE+L NLY+L++ +FRG+SL++ + F++Q+ L L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 230 K--DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG 287
+ IIHCDLKPENILLC + A IKI+DFGS+C + +Y IQSR+YRSPEVLLG
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 232
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347
Y AIDMWS GCI+ E+ G PLF GA+E D + +++ +LG PP ++L +A KF
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI-PPAHILDQAPKARKF 291
Query: 348 FK 349
F+
Sbjct: 292 FE 293
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 166/242 (68%), Gaps = 5/242 (2%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY + L+G G+FGQV K +D +VA+KIIKN+ A+ QA +EV +L +NK +D E
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK-HDTE 113
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
K++IV + +F+ + HLC+ FE+L NLY+L++ +FRG+SL++ + F++Q+ L L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 230 K--DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG 287
+ IIHCDLKPENILLC + A IKI+DFGS+C + +Y IQSR+YRSPEVLLG
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 232
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347
Y AIDMWS GCI+ E+ G PLF GA+E D + +++ +LG PP ++L +A KF
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI-PPAHILDQAPKARKF 291
Query: 348 FK 349
F+
Sbjct: 292 FE 293
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 173/361 (47%), Gaps = 62/361 (17%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
RY + D LG G FG+V +C D + VAVKI+KN Y + A E+ +L LN D
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT-DP 73
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
V++ E+F H+CI FELL + Y+ IK N F L ++ + QI + ++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 229 LKDAGIIHCDLKPENILLCTS---------VKPAE-------IKIIDFGSACTEDRTVYS 272
L + H DLKPENIL S +K E IK++DFGSA +D +
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST 193
Query: 273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
+ +R+YR+PEV+L ++ D+WS GCI+ E +LG +FP + L M RILG
Sbjct: 194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 333 PPDYVLKEAKNTSKFFKCIGSVHN-IENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P + K K K+F H+ ++ E S GR Y +R K
Sbjct: 254 PKHMIQKTRKR--KYFH-----HDRLDWDEHSSAGR----------YVSRACK------- 289
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
P ++ + +D+ E L D ++ ++E+DPAKR + +A +HP
Sbjct: 290 --------------PLKEFMLSQDVEHER-----LFDLIQKMLEYDPAKRITLREALKHP 330
Query: 452 F 452
F
Sbjct: 331 F 331
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 172/361 (47%), Gaps = 62/361 (17%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
RY + D LG G FG+V +C D + VAVKI+KN Y + A E+ +L LN D
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT-DP 73
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
V++ E+F H+CI FELL + Y+ IK N F L ++ + QI + ++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 229 LKDAGIIHCDLKPENILLCTS---------VKPAE-------IKIIDFGSACTEDRTVYS 272
L + H DLKPENIL S +K E IK++DFGSA +D +
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST 193
Query: 273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
+ R+YR+PEV+L ++ D+WS GCI+ E +LG +FP + L M RILG
Sbjct: 194 LVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 333 PPDYVLKEAKNTSKFFKCIGSVHN-IENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P + K K K+F H+ ++ E S GR Y +R K
Sbjct: 254 PKHMIQKTRKR--KYFH-----HDRLDWDEHSSAGR----------YVSRACK------- 289
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
P ++ + +D+ E L D ++ ++E+DPAKR + +A +HP
Sbjct: 290 --------------PLKEFMLSQDVEHER-----LFDLIQKMLEYDPAKRITLREALKHP 330
Query: 452 F 452
F
Sbjct: 331 F 331
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 172/365 (47%), Gaps = 60/365 (16%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY 166
Q RY + LG GTFG+V +C D A S VA+KII+N Y + A +E+++L + +K
Sbjct: 50 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK- 108
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
D+E+K V + ++F H+CI FELL N +E +K N+F+ L V+ + Q+ L
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 168
Query: 227 SLLKDAGIIHCDLKPENILLCT----------------SVKPAEIKIIDFGSACTEDRTV 270
L + + H DLKPENIL SVK I++ DFGSA +
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 228
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
+ + +R+YR PEV+L + D+WS GCI+ E + G LF + L M +ILG
Sbjct: 229 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 288
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
P + + K K+F G V + E S GR +E KPL K
Sbjct: 289 PIPSHMIHRTRK--QKYFYKGGLVWD----ENSSDGRY-----------VKENCKPL--K 329
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
Y LE + L D ++ ++EFDPA+R + +A H
Sbjct: 330 SYMLQDSLEHV-----------------------QLFDLMRRMLEFDPAQRITLAEALLH 366
Query: 451 PFVTG 455
PF G
Sbjct: 367 PFFAG 371
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 177/362 (48%), Gaps = 60/362 (16%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKY 166
Q RY + LG GTFG+V +C D + VA+KIIKN Y + A +E+++L +N+K
Sbjct: 32 QERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEK- 90
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
D ++K+ V+++++F H+CI FELL + ++ +K N++ + V+ + Q+ + +
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 227 SLLKDAGIIHCDLKPENILLCTS----------------VKPAEIKIIDFGSACTEDRTV 270
L D + H DLKPENIL S VK ++++DFGSA +
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHH 210
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
+ + +R+YR+PEV+L ++ D+WS GCI+ E ++G LF + L M RILG
Sbjct: 211 STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILG 270
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
P + K K K+F GR + T RE KPL +
Sbjct: 271 PIPSRMIRKTRK--QKYF---------------YRGRLDWDENTSAGRYVRENCKPL--R 311
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
Y ++ E++ L D ++ ++E++PAKR + +A +H
Sbjct: 312 RY-----------------------LTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQH 348
Query: 451 PF 452
PF
Sbjct: 349 PF 350
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 172/365 (47%), Gaps = 60/365 (16%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY 166
Q RY + LG GTFG+V +C D A S VA+KII+N Y + A +E+++L + +K
Sbjct: 27 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK- 85
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
D+E+K V + ++F H+CI FELL N +E +K N+F+ L V+ + Q+ L
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 227 SLLKDAGIIHCDLKPENILLCT----------------SVKPAEIKIIDFGSACTEDRTV 270
L + + H DLKPENIL SVK I++ DFGSA +
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 205
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
+ + +R+YR PEV+L + D+WS GCI+ E + G LF + L M +ILG
Sbjct: 206 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 265
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
P + + K K+F G V + E S GR +E KPL K
Sbjct: 266 PIPSHMIHRTRK--QKYFYKGGLVWD----ENSSDGRY-----------VKENCKPL--K 306
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
Y LE + L D ++ ++EFDPA+R + +A H
Sbjct: 307 SYMLQDSLEHV-----------------------QLFDLMRRMLEFDPAQRITLAEALLH 343
Query: 451 PFVTG 455
PF G
Sbjct: 344 PFFAG 348
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 172/365 (47%), Gaps = 60/365 (16%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY 166
Q RY + LG GTFG+V +C D A S VA+KII+N Y + A +E+++L + +K
Sbjct: 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK- 76
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
D+E+K V + ++F H+CI FELL N +E +K N+F+ L V+ + Q+ L
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 227 SLLKDAGIIHCDLKPENILLCT----------------SVKPAEIKIIDFGSACTEDRTV 270
L + + H DLKPENIL SVK I++ DFGSA +
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 196
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
+ + +R+YR PEV+L + D+WS GCI+ E + G LF + L M +ILG
Sbjct: 197 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 256
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
P + + K K+F G V + E S GR +E KPL K
Sbjct: 257 PIPSHMIHRTRK--QKYFYKGGLVWD----ENSSDGRY-----------VKENCKPL--K 297
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
Y LE + L D ++ ++EFDPA+R + +A H
Sbjct: 298 SYMLQDSLEHV-----------------------QLFDLMRRMLEFDPAQRITLAEALLH 334
Query: 451 PFVTG 455
PF G
Sbjct: 335 PFFAG 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 141/266 (53%), Gaps = 19/266 (7%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK----K 165
RYI+ LG G F V D N+ VA+KI++ Y + A E+ +L +N K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 166 YDREDKHHIVRIYEYFVCQ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
D +HI+++ ++F + H+ + FE+L NL LIK RG+ L V+ SKQ
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 222 ILRGLSLL-KDAGIIHCDLKPENILLCTSVKPA---EIKIIDFGSACTEDRTVYSYIQSR 277
+L GL + + GIIH D+KPEN+L+ P +IKI D G+AC D + IQ+R
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP------GASEFDLLRRMIRILGA 331
YRSPEVLLG + D+WS C++ EL G LF + D + ++I +LG
Sbjct: 200 EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG- 258
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNI 357
+ P Y+L+ K T FF G + NI
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 141/266 (53%), Gaps = 19/266 (7%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK----K 165
RYI+ LG G F V D N+ VA+KI++ Y + A E+ +L +N K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 166 YDREDKHHIVRIYEYFVCQ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
D +HI+++ ++F + H+ + FE+L NL LIK RG+ L V+ SKQ
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 222 ILRGLSLL-KDAGIIHCDLKPENILLCTSVKPA---EIKIIDFGSACTEDRTVYSYIQSR 277
+L GL + + GIIH D+KPEN+L+ P +IKI D G+AC D + IQ+R
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP------GASEFDLLRRMIRILGA 331
YRSPEVLLG + D+WS C++ EL G LF + D + ++I +LG
Sbjct: 200 EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG- 258
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNI 357
+ P Y+L+ K T FF G + NI
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 162/366 (44%), Gaps = 66/366 (18%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
++V +G GTFG+V C + + AVK+++N Y + A +E IL + +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
V+ + F+ H+C+ FE L +LYE+I N++ G + ++L+ +IL+ L+ L+
Sbjct: 97 NI--VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154
Query: 231 DAGIIHCDLKPENILL----------------------CTSVKPAEIKIIDFGSACTEDR 268
+ H DLKPENILL K IK+IDFG A +
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214
Query: 269 TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
S I +R YR+PEV+L + + DMWSFGC++AEL+ G LF + L M I
Sbjct: 215 YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESI 274
Query: 329 LGAQPPDYVLKEAK-NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPL 387
+ P + + + K N SK+ + E+ + ++ I
Sbjct: 275 IQPIPKNMLYEATKTNGSKY---------VNKDELKLAWPENASSINSI----------- 314
Query: 388 IGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQA 447
KH+ +K L + I K DFL +++ DP R SP +
Sbjct: 315 --------KHV---------KKCLPLYKIIKHE----LFCDFLYSILQIDPTLRPSPAEL 353
Query: 448 SRHPFV 453
+H F+
Sbjct: 354 LKHKFL 359
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 133/226 (58%), Gaps = 22/226 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDREDKH-H 173
LG+GT+ V K + +VA+K +K ++ A+ E+S++ +E KH +
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLM--------KELKHEN 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKI----NHFRGLSLSIVQLFSKQILRGLSLL 229
IVR+Y+ + L + FE +D++L + + N RGL L++V+ F Q+L+GL+
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CTEDRTVYSYIQSRYYRSPEVLL 286
+ I+H DLKP+N+L+ K ++K+ DFG A T S + + +YR+P+VL+
Sbjct: 125 HENKILHRDLKPQNLLIN---KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 287 GYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
G + Y+T+ID+WS GCI+AE+ G PLFPG ++ + L+ + I+G
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT 227
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 426 LVDFLKGLVEFDPAKRWSPFQASRHPF 452
L+DFL GL++ +P R S QA HP+
Sbjct: 270 LMDFLHGLLQLNPDMRLSAKQALHHPW 296
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 123/222 (55%), Gaps = 19/222 (8%)
Query: 117 LGHGTFGQVAKCWD--AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-H 173
+G GT+G V K + E + +++ K + E+SIL +E KH +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL--------KELKHSN 61
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++Y+ ++ L + FE LD +L +L+ + GL + F Q+L G++ D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLG-YQ 289
++H DLKP+N+L+ + E+KI DFG A V Y I + +YR+P+VL+G +
Sbjct: 121 VLHRDLKPQNLLIN---REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+T ID+WS GCI AE+ G PLFPG SE D L R+ RILG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 19/222 (8%)
Query: 117 LGHGTFGQVAKCWD--AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-H 173
+G GT+G V K + E + +++ K + E+SIL +E KH +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL--------KELKHSN 61
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++Y+ ++ L + FE LD +L +L+ + GL + F Q+L G++ D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLG-YQ 289
++H DLKP+N+L+ + E+KI DFG A V Y + + +YR+P+VL+G +
Sbjct: 121 VLHRDLKPQNLLIN---REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+T ID+WS GCI AE+ G PLFPG SE D L R+ RILG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 19/222 (8%)
Query: 117 LGHGTFGQVAKCWD--AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-H 173
+G GT+G V K + E + +++ K + E+SIL +E KH +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL--------KELKHSN 61
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++Y+ ++ L + FE LD +L +L+ + GL + F Q+L G++ D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLG-YQ 289
++H DLKP+N+L+ + E+KI DFG A V Y + + +YR+P+VL+G +
Sbjct: 121 VLHRDLKPQNLLIN---REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+T ID+WS GCI AE+ G PLFPG SE D L R+ RILG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGT 219
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 59/305 (19%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
RY V LG G F V CWD + FVA+K++K+ Y + AL E+ +L + ++ D
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCV-RESDPS 90
Query: 170 D--KHHIVRIYEYFVCQ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
D K +V++ + F H+C+ FE+L +L + I ++++GL + V+ +Q+L
Sbjct: 91 DPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVL 150
Query: 224 RGLSLL-KDAGIIHCDLKPENILLC----------------------------TSVKPA- 253
+GL L IIH D+KPENIL+C S PA
Sbjct: 151 QGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAA 210
Query: 254 ---------------EIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWS 298
+KI D G+AC + IQ+R YRS EVL+G Y+T D+WS
Sbjct: 211 DLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWS 270
Query: 299 FGCIVAELFLGLPLFPGAS------EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIG 352
C+ EL G LF S + D + +I +LG+ P + L K + +FF G
Sbjct: 271 TACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALS-GKYSREFFNRRG 329
Query: 353 SVHNI 357
+ +I
Sbjct: 330 ELRHI 334
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 65
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKPEN+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 126 VLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 229
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKPEN+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 70
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 131 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKPEN+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 125 VLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 228
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKPEN+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKPEN+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 125 VLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE +D +L + + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GLS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 70
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 131 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 234
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 65
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 126 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 229
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 67
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 128 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 65
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 126 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 67
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 128 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 65
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 126 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 229
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 125 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 228
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 125 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 64
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 125 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 228
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 66
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + G+ L +++ + Q+L+GL+
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 127 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVE-------VSILTT 161
+G G +G V +DA + VAVK +I + Y + L++ + +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
ED + Y V L+ ++L ++K + LS VQ Q
Sbjct: 96 FTPATSIEDFSEV-----YLVTT--------LMGADLNNIVKC---QALSDEHVQFLVYQ 139
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
+LRGL + AGIIH DLKP N+ + + +E++I+DFG A D + Y+ +R+YR+
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
PE++L + Y +D+WS GCI+AEL G LFPG+ D L+R++ ++G P+ + K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 255
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE-- 83
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
+I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 84 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 135
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ +++KI DFG A D + Y+ +
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVE-------VSILTT 161
+G G +G V +DA + VAVK +I + Y + L++ + +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
ED + Y V L+ ++L ++K + LS VQ Q
Sbjct: 96 FTPATSIEDFSEV-----YLVTT--------LMGADLNNIVK---SQALSDEHVQFLVYQ 139
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
+LRGL + AGIIH DLKP N+ + + +E++I+DFG A D + Y+ +R+YR+
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
PE++L + Y +D+WS GCI+AEL G LFPG+ D L+R++ ++G P+ + K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 255
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 76
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 133
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 96
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 153
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 76
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 133
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE-- 83
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
+I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 84 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 135
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 78
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 135
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 35/239 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVE-------VSILTT 161
+G G +G V +DA + VAVK +I + Y + L++ + +L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
ED + Y V L+ ++L ++K + LS VQ Q
Sbjct: 88 FTPATSIEDFSEV-----YLVTT--------LMGADLNNIVKC---QALSDEHVQFLVYQ 131
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
+LRGL + AGIIH DLKP N+ + + E++I+DFG A D + Y+ +R+YR+
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLARQADEEMTGYVATRWYRA 188
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
PE++L + Y +D+WS GCI+AEL G LFPG+ D L+R++ ++G P+ + K
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAK 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 84
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 141
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 254
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 76
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 133
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 76
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 133
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 74
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 131
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 76
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 133
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 81
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 138
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 82
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 139
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 252
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 73
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 130
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 243
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 74
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 131
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 129/245 (52%), Gaps = 31/245 (12%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YI 274
Q+L G+ L AGIIH DLKP NI++ + A +KI+DFG A T + Y+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFMMTPYV 186
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 335 DYVLK 339
+++ K
Sbjct: 247 EFMKK 251
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 150
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 208
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 327 REMNPNYTEF 336
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 109
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 167
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 286 REMNPNYTEF 295
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 107
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 165
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 283
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 284 REMNPNYTEF 293
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 59/306 (19%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL-NKKYDR 168
RY V LG G F V WD + FVA+K++K+ Y + AL E+ +L ++ N +
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 169 EDKHHIVRIYEYF----VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
++ +V++ + F V H+C+ FE+L +L + I ++++GL L V+ +Q+L+
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157
Query: 225 GLSLL-KDAGIIHCDLKPENILLCTS---------------------------------- 249
GL L IIH D+KPENILL +
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATA 217
Query: 250 ----VKPAE--------IKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMW 297
V P E +KI D G+AC + IQ+R YRS EVL+G Y T D+W
Sbjct: 218 GNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIW 277
Query: 298 SFGCIVAELFLGLPLFPGAS------EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCI 351
S C+ EL G LF S + D + +I +LG P ++ K + +FF
Sbjct: 278 STACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA-GKYSKEFFTKK 336
Query: 352 GSVHNI 357
G + +I
Sbjct: 337 GDLKHI 342
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+ I+ A+ E+S+L LN +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP-------N 63
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 124 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+ I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE L +L + + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 105
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 163
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 282 REMNPNYTEF 291
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA++ I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 129/245 (52%), Gaps = 31/245 (12%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YI 274
Q+L G+ L AGIIH DLKP NI++ + A +KI+DFG A T + Y+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFMMTPYV 186
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 335 DYVLK 339
+++ K
Sbjct: 247 EFMKK 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 99
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 157
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 275
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 276 REMNPNYTEF 285
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + VA+K I+ A+ E+S+L LN +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV++ + + L + FE + +L + + G+ L +++ + Q+L+GL+
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQY 290
++H DLKP+N+L+ T IK+ DFG A V +Y + + +YR+PE+LLG +Y
Sbjct: 123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 291 -TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338
+TA+D+WS GCI AE+ LFPG SE D L R+ R LG PD V+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVV 226
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 59/306 (19%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL-NKKYDR 168
RY V LG G F V WD + FVA+K++K+ Y + AL E+ +L ++ N +
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 169 EDKHHIVRIYEYF----VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
++ +V++ + F V H+C+ FE+L +L + I ++++GL L V+ +Q+L+
Sbjct: 82 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 141
Query: 225 GLSLL-KDAGIIHCDLKPENILLCTS---------------------------------- 249
GL L IIH D+KPENILL +
Sbjct: 142 GLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATA 201
Query: 250 ----VKPAE--------IKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMW 297
V P E +KI D G+AC + IQ+R YRS EVL+G Y T D+W
Sbjct: 202 GNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIW 261
Query: 298 SFGCIVAELFLGLPLFPGAS------EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCI 351
S C+ EL G LF S + D + +I +LG P ++ K + +FF
Sbjct: 262 STACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA-GKYSKEFFTKK 320
Query: 352 GSVHNI 357
G + +I
Sbjct: 321 GDLKHI 326
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 21/233 (9%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V+ +D + VA+K I Y Q+ L E+ IL ++
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILL----RFR 99
Query: 168 REDKHHIVRIYE--YFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
E+ I I R + I +L++++LY+L+K LS + F QILRG
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRG 156
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQSRYY 279
L + A ++H DLKP N+L+ T+ ++KI DFG A D + + +R+Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTT---CDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 280 RSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 129/245 (52%), Gaps = 31/245 (12%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YI 274
Q+L G+ L AGIIH DLKP NI++ + A +KI+DFG A T + Y+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFMMTPYV 186
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 335 DYVLK 339
+++ K
Sbjct: 247 EFMKK 251
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 96
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + + L+ ++LY+L+K H LS + F QI
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQI 153
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + Y+ +
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTT---XDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 76
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 134
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 252
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 253 REMNPNYTEF 262
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 132/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + A+ + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 132/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + A+ + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 31/249 (12%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK------NQPAYYQQALVEVSILTTL 162
+RY D LG G F V K D N VA+K IK + + AL E+ +L L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
+ +I+ + + F + ++ + F+ ++++L +IK N L+ S ++ +
Sbjct: 70 SHP-------NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV-LTPSHIKAYMLMT 121
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CTEDRTVYSYIQSRYY 279
L+GL L I+H DLKP N+LL + +K+ DFG A + +R + +R+Y
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRAYXHQVVTRWY 178
Query: 280 RSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG-------- 330
R+PE+L G + Y +DMW+ GCI+AEL L +P PG S+ D L R+ LG
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238
Query: 331 --AQPPDYV 337
PDYV
Sbjct: 239 DMCSLPDYV 247
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 31/237 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+G G G V +DA + VA+K + +NQ + ++A E+ ++ +N K
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHK------- 83
Query: 173 HIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILR 224
+I+ + F Q+ L I EL+D+NL ++I+ ++H R + Q+L
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQMLV 137
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YIQSRYYRSP 282
G+ L AGIIH DLKP NI++ + A +KI+DFG A T + Y+ +RYYR+P
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
EV+LG Y +D+WS G I+ E+ G LFPG D ++I LG P+++ K
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 84
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 142
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 260
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 261 REMNPNYTEF 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 80
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 137
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + + +
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 27/236 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYD 167
RY +G G +G V +D VA+K I Y Q+ L E+ IL
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL------- 81
Query: 168 REDKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
R +I+ I + + + I +L++++LY+L+K H LS + F QI
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQI 138
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------VYSYIQS 276
LRGL + A ++H DLKP N+LL T+ ++KI DFG A D + + +
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 277 RYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
R+YR+PE++L + YT +ID+WS GCI+AE+ P+FPG D L ++ ILG+
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 31/237 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+G G G V +DA + VA+K + +NQ + ++A E+ ++ +N K
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHK------- 83
Query: 173 HIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILR 224
+I+ + F Q+ L I EL+D+NL ++I+ ++H R + Q+L
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQMLV 137
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YIQSRYYRSP 282
G+ L AGIIH DLKP NI++ + A +KI+DFG A T + Y+ +RYYR+P
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD---ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
EV+LG Y +D+WS G I+ E+ G LFPG D ++I LG P+++ K
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 244 PSPEFMKK 251
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 22/233 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSIL--TTLNKKYDREDKHHI 174
+G G +G V K D FVA+K ++ + +S + L ++ + + ++
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 175 VRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
VR+ + R + + FE +D +L + GL ++ +Q LRGL L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRSP 282
I+H DLKPENIL+ + +K+ DFG A +YSY + + +YR+P
Sbjct: 137 HANCIVHRDLKPENILVTSG---GTVKLADFGLA-----RIYSYQMALTPVVVTLWYRAP 188
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
EVLL Y T +DMWS GCI AE+F PLF G SE D L ++ ++G P D
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 55/268 (20%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY 166
+ ++Y + LG G+FG V + +D E A+K + P Y + L + +L +N
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN--- 61
Query: 167 DREDKHHIVRIYEYFVC--------------------------------------QRHLC 188
I+++ +YF ++L
Sbjct: 62 -------IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114
Query: 189 ICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL 246
+ E + L++++K I R + ++++ ++ Q+ R + + GI H D+KP+N+L+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 247 CTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIV 303
+ K +K+ DFGSA + I SR+YR+PE++LG +YT +ID+WS GC+
Sbjct: 175 NS--KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 304 AELFLGLPLFPGASEFDLLRRMIRILGA 331
EL LG PLF G + D L R+I+I+G
Sbjct: 233 GELILGKPLFSGETSIDQLVRIIQIMGT 260
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 105
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 163
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 282 REMNPNYTEF 291
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 244 PSPEFMKK 251
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA SYI SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 84
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 85 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 131
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRT--VY 271
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + +
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMV 185
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
++ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 245
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 246 PCPEFMKK 253
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + A+ + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 127/246 (51%), Gaps = 33/246 (13%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L I EL+D+NL ++I++ L +
Sbjct: 84 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYL 132
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS--Y 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + Y
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 186
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
Query: 334 PDYVLK 339
P+++ K
Sbjct: 247 PEFMKK 252
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G +G V K D FVA+K ++ + + EV++L ++ + + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL----RRLEAFEHPN 67
Query: 174 IVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+VR+ + R + + FE +D +L + GL ++ +Q LRGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRS 281
L I+H DLKPENIL+ + +K+ DFG A +YSY + + +YR+
Sbjct: 128 LHANCIVHRDLKPENILVTSG---GTVKLADFGLA-----RIYSYQMALAPVVVTLWYRA 179
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PEVLL Y T +DMWS GCI AE+F PLF G SE D L ++ ++G P D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 81/400 (20%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKK 165
R+Y + LG G +G V K D VAVK I + Q+ E+ ILT L+
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
+ + +++R R + + F+ ++++L+ +I+ N + Q Q+++
Sbjct: 69 ENIVNLLNVLRADN----DRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVYQLIKV 121
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-------------------- 265
+ L G++H D+KP NILL +K+ DFG + +
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 266 ---EDRTVYS-YIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320
+D+ + + Y+ +R+YR+PE+LLG +YT IDMWS GCI+ E+ G P+FPG+S +
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238
Query: 321 LLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEA 380
L R+I ++ F V +I+ S ++ ++L E + E
Sbjct: 239 QLERIIGVID-----------------FPSNEDVESIQ----SPFAKTMIESLKE-KVEI 276
Query: 381 RELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAK 440
R+ K +I T + KNL ++ I+ ++ +D L L++F+P K
Sbjct: 277 RQSNK-------------RDIFTKW---KNLLLK-INPKADCNEEALDLLDKLLQFNPNK 319
Query: 441 RWSPFQASRHPFVTGEPFTCPYQPP--PETPRVPVAQNFK 478
R S A +HPFV+ F P + P +P+ N K
Sbjct: 320 RISANDALKHPFVS--IFHNPNEEPNCDHIITIPINDNVK 357
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G +G V K D FVA+K ++ + + EV++L ++ + + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL----RRLEAFEHPN 67
Query: 174 IVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+VR+ + R + + FE +D +L + GL ++ +Q LRGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRS 281
L I+H DLKPENIL+ + +K+ DFG A +YSY + + +YR+
Sbjct: 128 LHANCIVHRDLKPENILVTSG---GTVKLADFGLA-----RIYSYQMALDPVVVTLWYRA 179
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PEVLL Y T +DMWS GCI AE+F PLF G SE D L ++ ++G P D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G +G V K D FVA+K ++ + + EV++L ++ + + +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL----RRLEAFEHPN 67
Query: 174 IVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+VR+ + R + + FE +D +L + GL ++ +Q LRGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRS 281
L I+H DLKPENIL+ + +K+ DFG A +YSY + + +YR+
Sbjct: 128 LHANCIVHRDLKPENILVTSG---GTVKLADFGLA-----RIYSYQMALFPVVVTLWYRA 179
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PEVLL Y T +DMWS GCI AE+F PLF G SE D L ++ ++G P D
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 244 PCPEFMKK 251
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 23/227 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K D++ VA+K I+ A+ E+S+L L HH
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL---------HH 78
Query: 174 --IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
IV + + +R L + FE ++ +L +++ N GL S ++++ Q+LRG++
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLG- 287
I+H DLKP+N+L+ + +K+ DFG A V SY + + +YR+P+VL+G
Sbjct: 138 HRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+Y+T++D+WS GCI AE+ G PLFPG ++ D L ++ ILG P
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 23/227 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K D++ VA+K I+ A+ E+S+L L HH
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL---------HH 78
Query: 174 --IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
IV + + +R L + FE ++ +L +++ N GL S ++++ Q+LRG++
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLG- 287
I+H DLKP+N+L+ + +K+ DFG A V SY + + +YR+P+VL+G
Sbjct: 138 HRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+Y+T++D+WS GCI AE+ G PLFPG ++ D L ++ ILG P
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 168/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 120
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 121 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 167
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRT--VY 271
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + +
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 221
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 282 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 321
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 322 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 357
Query: 452 FV 453
++
Sbjct: 358 YI 359
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 28/307 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E RY +G G +G V +D + VAVK + + ++ E+ +L +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQ 216
+ +++ + + F R L + L+ ++L ++K + L+ VQ
Sbjct: 99 KHE-------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQ 148
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
QILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVAT 205
Query: 277 RYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G +
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 336 YVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELKKPLIGK 390
+ K + +++ + + + + + V IG L E ++ + R +
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 391 EYFHHKH 397
YF H
Sbjct: 326 AYFAQYH 332
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 28/307 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E RY +G G +G V +D + VAVK + + ++ E+ +L +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQ 216
+ +++ + + F R L + L+ ++L ++K + L+ VQ
Sbjct: 98 KHE-------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQ 147
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
QILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVAT 204
Query: 277 RYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G +
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264
Query: 336 YVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELKKPLIGK 390
+ K + +++ + + + + + V IG L E ++ + R +
Sbjct: 265 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 324
Query: 391 EYFHHKH 397
YF H
Sbjct: 325 AYFAQYH 331
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
L+G G++G V KC + + VA+K + + A+ E+ +L L +
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE------- 84
Query: 173 HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232
++V + E ++ + FE +D + + +++ GL +VQ + QI+ G+
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYS-YIQSRYYRSPEVLLG-Y 288
IIH D+KPENIL+ S +K+ DFG A T VY + +R+YR+PE+L+G
Sbjct: 144 NIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+Y A+D+W+ GC+V E+F+G PLFPG S+ D L ++ LG P
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E RY +G G +G V +D + VAVK + + ++ E+ +L +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQ 216
+ +++ + + F R L + L+ ++L ++K + L+ VQ
Sbjct: 85 KHE-------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQ 134
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
QILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVAT 191
Query: 277 RYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGA 250
Query: 336 YVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
+LK+ + S + + + + + V IG
Sbjct: 251 ELLKKISSESARNYIQSLAQMPKMNFANVFIGA 283
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 83
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 141
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 259
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 260 REMNPNYTEF 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 83
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 141
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 259
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 260 REMNPNYTEF 269
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 166/359 (46%), Gaps = 75/359 (20%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YI 274
Q+L G+ L AGIIH DLKP NI++ + +KI+DFG A T + Y+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFMMTPYV 186
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFH 394
++ +K+ + T + + +EN R Y LT + L + H
Sbjct: 247 EF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSEH 286
Query: 395 HKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 287 NK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 90
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 148
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 266
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 267 REMNPNYTEF 276
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 79
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 137
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 255
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 256 REMNPNYTEF 265
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 166/359 (46%), Gaps = 75/359 (20%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YI 274
Q+L G+ L AGIIH DLKP NI++ + +KI+DFG A T + Y+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFMMTPYV 186
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFH 394
++ +K+ + T + + +EN R Y LT + L + H
Sbjct: 247 EF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSEH 286
Query: 395 HKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 287 NK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 86
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 143
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVATRWYRA 200
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 259
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 260 ISSESARNYIQSLAQMPKMNFANVFIGA 287
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 277
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 77
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 78 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 124
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + +E+KI+DFG A D +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHTDDEM 181
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 242 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 164/357 (45%), Gaps = 71/357 (19%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 75
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L + EL+D+NL ++I++ L +
Sbjct: 76 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYL 124
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YIQS 276
Q+L G+ L AGIIH DLKP NI++ + +KI+DFG A T + Y+ +
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFMMTPYVVT 181
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG P++
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241
Query: 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHK 396
+K+ + T + + +EN R Y LT + L + H+K
Sbjct: 242 -MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSEHNK 281
Query: 397 HLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
K SQ R D L ++ DPAKR S A +HP++
Sbjct: 282 --------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 71
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 72 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 118
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 175
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 296 AQALAHAYFAQYH 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 81
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 82 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 128
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + +E+KI+DFG A D +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHTDDEM 185
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 246 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 94
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 95 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 141
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 198
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 259 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 318
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 319 AQALAHAYFAQYH 331
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 95
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 96 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 142
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 199
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 260 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 320 AQALAHAYFAQYH 332
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 249
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 75
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 133
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 251
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 252 REMNPNYTEF 261
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL--- 87
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 88 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 134
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 191
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 252 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 384 KKPLIGKEYFHHKH 397
+ YF H
Sbjct: 311 AAQALAHAYFAQYH 324
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 98
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 99 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 145
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 202
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 323 AQALAHAYFAQYH 335
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 77/360 (21%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 120
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L + EL+D+NL ++I++ L +
Sbjct: 121 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYL 169
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRT--VYSY 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + + Y
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 223
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF 393
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 284 PEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSE 323
Query: 394 HHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
H+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 324 HNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 87
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 88 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 134
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 191
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 252 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 384 KKPLIGKEYFHHKH 397
+ YF H
Sbjct: 311 AAQALAHAYFAQYH 324
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 87
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 88 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 134
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 191
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 252 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 310
Query: 384 KKPLIGKEYFHHKH 397
+ YF H
Sbjct: 311 AAQALAHAYFAQYH 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 81
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 138
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 254
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGA 282
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E RY +G G +G V +D + VAVK + + ++ E+ +L +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQ 216
+ +++ + + F R L + L+ ++L ++K + L+ VQ
Sbjct: 85 KHE-------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQ 134
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
QILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVAT 191
Query: 277 RYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGA 250
Query: 336 YVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
+LK+ + S + + + + + V IG
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 86
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 87 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 133
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEM 190
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 251 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 98
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 99 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 145
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 202
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 323 AQALAHAYFAQYH 335
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 77
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 78 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 124
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 181
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 242 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 279
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 249
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 77
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 78 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 124
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 181
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 302 AQALAHAYFAQYH 314
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 164/364 (45%), Gaps = 83/364 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +D + VAVK + +NQ + ++A E+ +L +N
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELI--KINHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I +++H R +
Sbjct: 83 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFG---SACTEDRTV 270
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG +ACT + +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTACT-NFMM 182
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
Y+ +RYYR+PEV+LG Y +D+WS GCI+ EL G +F G D ++I LG
Sbjct: 183 TPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLG 242
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
+++ + +EN R Y +
Sbjct: 243 TPSAEFMAALQPTVRNY---------VEN-------RPKYPGIK---------------- 270
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
EE+ ++ + S D K SQ R D L ++ DP KR S +A RH
Sbjct: 271 -------FEELFPDWIFPSE-SERDKIKTSQAR----DLLSKMLVIDPDKRISVDEALRH 318
Query: 451 PFVT 454
P++T
Sbjct: 319 PYIT 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 81
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 138
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 254
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGA 282
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 163/363 (44%), Gaps = 81/363 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +D + VAVK + +NQ + ++A E+ +L +N
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNH 80
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELI--KINHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I +++H R +
Sbjct: 81 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------MS 127
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACT--EDRTVY 271
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + +
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTASTNFMMT 181
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ EL G +F G D ++I LG
Sbjct: 182 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT 241
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
+++ + +EN R AY +
Sbjct: 242 PSAEFMAALQPTVRNY---------VEN-------RPAYPGIA----------------- 268
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
EE+ ++ + S D K SQ R D L ++ DP KR S +A RHP
Sbjct: 269 ------FEELFPDWIFPSE-SERDKIKTSQAR----DLLSKMLVIDPDKRISVDEALRHP 317
Query: 452 FVT 454
++T
Sbjct: 318 YIT 320
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 81
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 82 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 128
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 185
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 246 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 283
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 77
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 78 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 124
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 181
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 242 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Query: 384 KKPLIGKEYFHHKH 397
+ YF H
Sbjct: 301 AAQALAHAYFAQYH 314
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 36/278 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGG 366
G + + K + +++ + + + + + V IG
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 86
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 87 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 133
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 190
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 251 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 288
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 73
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 74 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 120
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 121 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 177
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 237
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 238 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 297
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 298 AQALAHAYFAQYH 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 384 KKPLIGKEYFHHKH 397
+ YF H
Sbjct: 299 AAQALAHAYFAQYH 312
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 45/335 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---SQKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + +E+KI+DFG D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLCRHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEAREL 383
G P +LK+ + S + + + + + V IG L E ++ + R
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 384 KKPLIGKEYF--HHKHLEEIVTNYPYRKNLSMEDI 416
+ YF +H +E V + PY ++L D+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPVAD-PYDQSLESRDL 332
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 29/253 (11%)
Query: 110 RYIVKDL--LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNK 164
R + +DL +G G +G V D + VA+K + + ++A E+ +L +
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
+ +++ + + F L + + ++L +L+K L +Q
Sbjct: 84 E-------NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFL 133
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY 278
Q+L+GL + AGIIH DLKP N+ + + E+KI+DFG A D + + +R+
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQADSEMXGXVVTRW 190
Query: 279 YRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PEV+L + +YT +D+WS GCI+AE+ G LF G+ D L+ ++++ G P ++V
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 338 LK----EAKNTSK 346
+ EAKN K
Sbjct: 251 QRLQSDEAKNYMK 263
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 143/313 (45%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 71
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K L
Sbjct: 72 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCA---KL 118
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 175
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 296 AQALAHAYFAQYH 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 72
Query: 171 KHHIVRIYEYFVC------QRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F + +L + + + +Y + + H+ + L + V+L+
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 130
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 248
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 249 REMNPNYTEF 258
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 80
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 81 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 127
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 184
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 305 AQALAHAYFAQYH 317
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DFG A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 249
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 80
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 81 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 127
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 184
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 245 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 282
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 74
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 75 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 121
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 122 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 178
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 238
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 239 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 276
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 82
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 83 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 129
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 186
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 247 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 163/351 (46%), Gaps = 75/351 (21%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N K
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHK------- 83
Query: 173 HIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILR 224
+I+ + F Q+ L + EL+D+NL ++I+ ++H R + Q+L
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MSYLLYQMLC 137
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YIQSRYYRSP 282
G+ L AGIIH DLKP NI++ + +KI+DFG A T + Y+ +RYYR+P
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342
EV+LG Y +D+WS GCI+ E+ LFPG D ++I LG P++ +K+ +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF-MKKLQ 253
Query: 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIV 402
T + + +EN R Y LT + L + H+K
Sbjct: 254 PTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSEHNK------ 288
Query: 403 TNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
K SQ R D L ++ DPAKR S A +HP++
Sbjct: 289 --------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 122/231 (52%), Gaps = 19/231 (8%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKK 165
++Y + +G GT+G V K + E + VA+K ++ + AL E+ +L L K
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
+IVR+++ + L + FE D +L + + L IV+ F Q+L+G
Sbjct: 62 -------NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKG 113
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSP 282
L ++H DLKP+N+L+ + E+K+ +FG A V Y + + +YR P
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 283 EVLLGYQ-YTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIRILGA 331
+VL G + Y+T+IDMWS GCI AEL G PLFPG D L+R+ R+LG
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 300 AQALAHAYFAQYH 312
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 72
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 73 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 119
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 176
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 297 AQALAHAYFAQYH 309
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 71
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 72 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 118
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 175
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 296 AQALAHAYFAQYH 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 39/258 (15%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVE-- 155
E RY +G G +G V +D + +AVK II + Y + L++
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 156 -----VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL 210
+ +L E+ + + Y V L+ ++L ++K + L
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDV-----YLVTH--------LMGADLNNIVKC---QKL 151
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 152 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 208
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG + L++++R+
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT 268
Query: 330 GAQPPDYVLK----EAKN 343
G P + + EA+N
Sbjct: 269 GTPPASVISRMPSHEARN 286
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 84 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 130
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 184
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 245 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 284
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 285 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 320
Query: 452 FV 453
++
Sbjct: 321 YI 322
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 72
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 73 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 119
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 176
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 297 AQALAHAYFAQYH 309
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 84 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 130
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 184
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 245 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 284
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 285 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 320
Query: 452 FV 453
++
Sbjct: 321 YI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 244 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 283
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 284 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 319
Query: 452 FV 453
++
Sbjct: 320 YI 321
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 71
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 72 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 118
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 175
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
++ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 296 AQALAHAYFAQYH 308
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYSY 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 274 --IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ G LFPG D ++I LG
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 244 PCPEFMKK 251
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 36/278 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
++ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGG 366
G + + K + +++ + + + + + V IG
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGA 277
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 19/223 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G GT+G V K + E + VA+K ++ + AL E+ +L L K +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-------N 62
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IVR+++ + L + FE D +L + + L IV+ F Q+L+GL
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEVLLGYQ- 289
++H DLKP+N+L+ + E+K+ DFG A V Y + + +YR P+VL G +
Sbjct: 122 VLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 290 YTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIRILGA 331
Y+T+IDMWS GCI AEL PLFPG D L+R+ R+LG
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGT 221
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 81
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 82 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 128
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 182
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 242
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 243 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 282
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 283 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 318
Query: 452 FV 453
++
Sbjct: 319 YI 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 81/362 (22%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L + EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 183
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 244 PCPEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPAD 283
Query: 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451
H+K K SQ R D L ++ DPAKR S A +HP
Sbjct: 284 SEHNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHP 319
Query: 452 FV 453
++
Sbjct: 320 YI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 165/360 (45%), Gaps = 77/360 (21%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 76
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L + EL+D+NL ++I++ L +
Sbjct: 77 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYL 125
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS--Y 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + Y
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 179
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF 393
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 240 PEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSE 279
Query: 394 HHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
H+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 280 HNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 27/250 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y ++G+G+FG V + + VA+K + + + E+ I+ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------D 71
Query: 171 KHHIVRIYEYFVCQ------RHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSK 220
+IVR+ +F +L + + + +Y + + H+ + L + V+L+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRY 278
Q+ R L+ + GI H D+KP+N+LL A +K+ DFGSA S I SRY
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 279 YRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
YR+PE++ G YT++ID+WS GC++AEL LG P+FPG S D L +I++LG + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 338 LKEAKNTSKF 347
+ N ++F
Sbjct: 248 REMNPNYTEF 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 161/360 (44%), Gaps = 77/360 (21%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 76
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L + EL+D+NL ++I++ L +
Sbjct: 77 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYL 125
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS--Y 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + Y
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 179
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF 393
P+++ K + +EN R Y LT + L +
Sbjct: 240 PEFMKKLQPTVRNY---------VEN-------RPKYAGLT----FPKLFPDSLFPADSE 279
Query: 394 HHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
H+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 280 HNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 165/360 (45%), Gaps = 77/360 (21%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 75
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L + EL+D+NL ++I++ L +
Sbjct: 76 K-------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYL 124
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS--Y 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + Y
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 178
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF 393
P++ +K+ + T + + +EN R Y LT + L +
Sbjct: 239 PEF-MKKLQPTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSE 278
Query: 394 HHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
H+K K SQ R D L ++ DPAKR S A +HP++
Sbjct: 279 HNK--------------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 28/307 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E RY +G G +G V +D + VAVK + + ++ E+ +L +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQ 216
+ +++ + + F R L + L+ ++L ++K + L+ VQ
Sbjct: 99 KHE-------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQ 148
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
QILRGL + A IIH DLKP N+ + + E+KI+DFG A D + + +
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMXGXVAT 205
Query: 277 RYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G +
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265
Query: 336 YVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELKKPLIGK 390
+ K + +++ + + + + + V IG L E ++ + R +
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 325
Query: 391 EYFHHKH 397
YF H
Sbjct: 326 AYFAQYH 332
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 33/246 (13%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 87
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLF 218
K +I+ + F Q+ L I EL+D+NL ++I++ L +
Sbjct: 88 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYL 136
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS--Y 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T + Y
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMTPY 190
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 250
Query: 334 PDYVLK 339
P+++ K
Sbjct: 251 PEFMKK 256
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 131/241 (54%), Gaps = 24/241 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSILTTLNKKYDREDKH- 172
+G G++G V KC + + VA+K ++ P + AL E+ +L L KH
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL--------KHP 62
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
++V + E F +R L + FE D L+EL + RG+ +V+ + Q L+ ++
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHK 120
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS-YIQSRYYRSPEVLLG- 287
IH D+KPENIL+ K + IK+ DFG A T Y + +R+YRSPE+L+G
Sbjct: 121 HNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347
QY +D+W+ GC+ AEL G+PL+PG S+ D L + + LG P + ++ +T+++
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH--QQVFSTNQY 235
Query: 348 F 348
F
Sbjct: 236 F 236
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
++ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDR 168
YI D LG GT+ V K ++ VA+K I+ ++ A+ EVS+L L
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL------ 57
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
KH +IV +++ ++ L + FE LD +L + + + +++ V+LF Q+LRGL+
Sbjct: 58 --KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLD-DCGNIINMHNVKLFLFQLLRGLA 114
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRSPEV 284
++H DLKP+N+L+ + E+K+ DFG A + +Y + + +YR P++
Sbjct: 115 YCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
Query: 285 LLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
LLG Y+T IDMW GCI E+ G PLFPG++ + L + RILG
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+D+G A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDYGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 163/351 (46%), Gaps = 75/351 (21%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+G G G V +DA ++ VA+K + +NQ + ++A E+ ++ +N K
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHK------- 83
Query: 173 HIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILR 224
+I+ + F Q+ L + EL+D+NL ++I+ ++H R + Q+L
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQMLC 137
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS--YIQSRYYRSP 282
G+ L AGIIH DLKP NI++ + +KI+DFG A T + Y+ +RYYR+P
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD---XTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342
EV+LG Y +D+WS GCI+ E+ LFPG D ++I LG P++ +K+ +
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF-MKKLQ 253
Query: 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIV 402
T + + +EN R Y LT + L + H+K
Sbjct: 254 PTVRNY--------VEN-------RPKYAGLT----FPKLFPDSLFPADSEHNK------ 288
Query: 403 TNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453
K SQ R D L ++ DPAKR S A +HP++
Sbjct: 289 --------------LKASQAR----DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 76
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 77 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 123
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYS- 272
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMMT 177
Query: 273 -YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
Y+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 237
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 238 PCPEFMKK 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 43/334 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 82
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 83 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 129
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEM 186
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 385 KPLIGKEYF--HHKHLEEIVTNYPYRKNLSMEDI 416
+ YF +H +E V + PY ++L D+
Sbjct: 307 AQALAHAYFAQYHDPDDEPVAD-PYDQSLESRDL 339
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 18/230 (7%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKY 166
RY LG GT+G+V K D N VA+K I+ + A+ EVS+L L +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR- 93
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
+I+ + L + FE +++L + + N +S+ +++ F Q++ G+
Sbjct: 94 ------NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGV 145
Query: 227 SLLKDAGIIHCDLKPENILLCTS--VKPAEIKIIDFGSACTEDRTVYSY---IQSRYYRS 281
+ +H DLKP+N+LL S + +KI DFG A + + I + +YR
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 282 PEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
PE+LLG + Y+T++D+WS CI AE+ + PLFPG SE D L ++ +LG
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG 255
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+G G +G+V K D + FVA+K ++ Q L + + L + + + ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL-RHLETFEHPNVV 77
Query: 176 RIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
R+++ R L + FE +D +L + G+ ++ Q+LRGL L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRSPE 283
++H DLKP+NIL+ +S +IK+ DFG A +YS+ + + +YR+PE
Sbjct: 138 SHRVVHRDLKPQNILVTSS---GQIKLADFGLA-----RIYSFQMALTSVVVTLWYRAPE 189
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
VLL Y T +D+WS GCI AE+F PLF G+S+ D L +++ ++G
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 82
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 83 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 129
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEM 186
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 247 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 36/267 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+DF A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFYLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G + + K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 341 AKNTSK-FFKCIGSVHNIENGEVSIGG 366
+ +++ + + + + + V IG
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 82
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 83 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 129
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEM 186
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 247 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 284
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 36/278 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+ FG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILGFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGG 366
G + + K + +++ + + + + + V IG
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 40/313 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+DFG A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTE----IEYEARELK 384
G + + K + +++ + + + + + V IG L E ++ + R
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 385 KPLIGKEYFHHKH 397
+ YF H
Sbjct: 300 AQALAHAYFAQYH 312
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVS 157
E RY +G G +G V +D + VAVK II + Y + L+
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL--- 75
Query: 158 ILTTLNKKYDREDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGL 210
+ KH +++ + + F R L + L+ ++L ++K + L
Sbjct: 76 ----------KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKL 122
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+ VQ QILRGL + A IIH DLKP N+ + + E+KI+D G A D +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDAGLARHTDDEM 179
Query: 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329
Y+ +R+YR+PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 330 GAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGG 366
G P +LK+ + S + + + + + V IG
Sbjct: 240 GT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+D G A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 249
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 12/222 (5%)
Query: 117 LGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+G G +G+V K D + FVA+K ++ Q L + + L + + + ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL-RHLETFEHPNVV 77
Query: 176 RIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
R+++ R L + FE +D +L + G+ ++ Q+LRGL L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEVLLGY 288
++H DLKP+NIL+ +S +IK+ DFG A + + S + + +YR+PEVLL
Sbjct: 138 SHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
Y T +D+WS GCI AE+F PLF G+S+ D L +++ ++G
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 38/268 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--------IIKNQPAYYQQALVEVSILTTLNKKYDR 168
+G G +G V +D + VAVK II + Y + L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-------------K 76
Query: 169 EDKH-HIVRIYEYFVCQRHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
KH +++ + + F R L + L+ ++L ++K + L+ VQ Q
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 133
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRS 281
ILRGL + A IIH DLKP N+ + + E+KI+D G A D + Y+ +R+YR+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 282 PEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
PE++L + Y +D+WS GCI+AEL G LFPG D L+ ++R++G P +LK+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK 249
Query: 341 AKNTS--KFFKCIGSVHNIENGEVSIGG 366
+ S + + + + + V IG
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGA 277
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+G G +G+V K D + FVA+K ++ Q L + + L + + + ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL-RHLETFEHPNVV 77
Query: 176 RIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
R+++ R L + FE +D +L + G+ ++ Q+LRGL L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-------IQSRYYRSPE 283
++H DLKP+NIL+ +S +IK+ DFG A +YS+ + + +YR+PE
Sbjct: 138 SHRVVHRDLKPQNILVTSS---GQIKLADFGLA-----RIYSFQMALTSVVVTLWYRAPE 189
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
VLL Y T +D+WS GCI AE+F PLF G+S+ D L +++ ++G
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 127/248 (51%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYSY 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMME 183
Query: 274 --IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P+++ K
Sbjct: 244 PCPEFMKK 251
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 28/245 (11%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRED 170
+K LLG G +G V VA+K I+ ++P + + L E+ IL K + E+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL----KHFKHEN 70
Query: 171 KHHIVRIY--EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
I I + F + I EL+ ++L+ +I + LS +Q F Q LR + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKV 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-------------VYSYIQ 275
L + +IH DLKP N+L+ ++ ++K+ DFG A D + + Y+
Sbjct: 128 LHGSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 276 SRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+R+YR+PEV+L +Y+ A+D+WS GCI+AELFL P+FPG L + I+G
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 335 DYVLK 339
D L+
Sbjct: 245 DNDLR 249
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 427 VDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQNFKVDHHPGA 485
+D L+ ++ FDPAKR + +A HP++ + + P P P P F+ DH+ A
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYL--QTYHDPNDEPEGEPIPP--SFFEFDHYKEA 337
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 18/223 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQA---LVEVSILTTLNKKY 166
RY + +LG G+FG+V KC D AVK+I A + L EV +L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQILR 224
D +I++++E I EL L+ E+IK F + + KQ+
Sbjct: 79 ---DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFS 132
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRT-VYSYIQSRYYRSP 282
G++ + I+H DLKPENILL + K +IKIIDFG S C + T + I + YY +P
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
EVL G Y D+WS G I+ L G P F G +E+D+L+R+
Sbjct: 193 EVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 125/245 (51%), Gaps = 28/245 (11%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRED 170
+K LLG G +G V VA+K I+ ++P + + L E+ IL K + E+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL----KHFKHEN 70
Query: 171 KHHIVRIY--EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
I I + F + I EL+ ++L+ +I + LS +Q F Q LR + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKV 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-------------VYSYIQ 275
L + +IH DLKP N+L+ ++ ++K+ DFG A D + + ++
Sbjct: 128 LHGSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 276 SRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+R+YR+PEV+L +Y+ A+D+WS GCI+AELFL P+FPG L + I+G
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 335 DYVLK 339
D L+
Sbjct: 245 DNDLR 249
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 427 VDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQNFKVDHHPGA 485
+D L+ ++ FDPAKR + +A HP++ + + P P P P F+ DH+ A
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYL--QTYHDPNDEPEGEPIPP--SFFEFDHYKEA 337
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 19/224 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKK 165
RY + +LG G+FG+V C D AVK+I Q + L EV +L L
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 107
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQIL 223
D +I+++YE+F + + + E+ E+I F + + + +Q+L
Sbjct: 108 ----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVL 160
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRS 281
G++ + I+H DLKPEN+LL + K A I+IIDFG + + + I + YY +
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
PEVL G Y D+WS G I+ L G P F GA+E+D+L+++
Sbjct: 221 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 37/248 (14%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNK 164
+RY +G G G V +DA + VA+K + +NQ + ++A E+ ++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNH 82
Query: 165 KYDREDKHHIVRIYEYFVCQRHL------CICFELLDSNLYELIK--INHFRGLSLSIVQ 216
K +I+ + F Q+ L I EL+D+NL ++I+ ++H R +
Sbjct: 83 K-------NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MS 129
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILL---CTSVKPAEIKIIDFGSACTEDRTVYSY 273
Q+L G+ L AGIIH DLKP NI++ CT +KI+DFG A T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT------LKILDFGLARTAGTSFMME 183
Query: 274 --IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
+ +RYYR+PEV+LG Y +D+WS GCI+ E+ LFPG D ++I LG
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 332 QPPDYVLK 339
P ++ K
Sbjct: 244 PCPAFMKK 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 17/223 (7%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKK 165
RY + +LG G+FG+V C D AVK+I Q + L EV +L L
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 106
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
D +I+++YE+F + + + E+ L++ I I+ R + ++ +Q+L
Sbjct: 107 ----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARII-RQVLS 160
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRSP 282
G++ + I+H DLKPEN+LL + K A I+IIDFG + + + I + YY +P
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 220
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
EVL G Y D+WS G I+ L G P F GA+E+D+L+++
Sbjct: 221 EVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 127/248 (51%), Gaps = 30/248 (12%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
R+ V+ + G GTFG V + VA+K + P + + L + L L
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL------- 76
Query: 170 DKHH--IVRIYEYF--VCQR-----HLCICFELLDSNLYELIKINHFRGLSLS---IVQL 217
HH IV++ YF + +R +L + E + L+ + N++R ++++
Sbjct: 77 --HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKV 133
Query: 218 FSKQILRGLSLLK--DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSY 273
F Q++R + L + H D+KP N+L+ + +K+ DFGSA + +Y
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 274 IQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
I SRYYR+PE++ G Q YTTA+D+WS GCI AE+ LG P+F G + L ++R+LG
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC- 250
Query: 333 PPDYVLKE 340
P VL++
Sbjct: 251 PSREVLRK 258
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 30/230 (13%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-HI 174
++G+G+FG V + E + VA+K + + + L + I+ KH ++
Sbjct: 47 VIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIV-----------KHPNV 94
Query: 175 VRIYEYFVC------QRHLCICFELLDSNLYELIKINHFRGLS----LSIVQLFSKQILR 224
V + +F + L + E + +Y + H+ L + +++L+ Q+LR
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASR--HYAKLKQTMPMLLIKLYMYQLLR 152
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSP 282
L+ + GI H D+KP+N+LL +K+IDFGSA S I SRYYR+P
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
Query: 283 EVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331
E++ G YTT ID+WS GC++AEL G PLFPG S D L +I++LG
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 25/242 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYD 167
Y + + +G+G +G V+ VA+K I N ++ L E+ IL K+
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKIL-----KHF 111
Query: 168 REDK----HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ D I+R + + + + +L++S+L+++I + + L+L V+ F Q+L
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLL 169
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CT----EDRTVYSYIQS 276
RGL + A +IH DLKP N+L+ + E+KI DFG A CT + Y+ +
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 277 RYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
R+YR+PE++L ++YT AID+WS GCI E+ LFPG + L+ ++ +LG P
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 336 YV 337
+
Sbjct: 287 VI 288
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 18/223 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQA---LVEVSILTTLNKKY 166
RY + +LG G+FG+V KC D AVK+I A + L EV +L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQILR 224
D +I++++E I EL L+ E+IK F + + KQ+
Sbjct: 79 ---DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFS 132
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRT-VYSYIQSRYYRSP 282
G++ + I+H DLKPENILL + K +IKIIDFG S C + T + I + YY +P
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
EVL G Y D+WS G I+ L G P F G +E+D+L+R+
Sbjct: 193 EVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 18/223 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQA---LVEVSILTTLNKKY 166
RY + +LG G+FG+V KC D AVK+I A + L EV +L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQILR 224
D +I++++E I EL L+ E+IK F + + KQ+
Sbjct: 79 ---DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFS 132
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRT-VYSYIQSRYYRSP 282
G++ + I+H DLKPENILL + K +IKIIDFG S C + T + I + YY +P
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
EVL G Y D+WS G I+ L G P F G +E+D+L+R+
Sbjct: 193 EVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 28/245 (11%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRED 170
+K LLG G +G V VA+K I+ ++P + + L E+ IL K + E+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL----KHFKHEN 70
Query: 171 KHHIVRIY--EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
I I + F + I EL+ ++L+ +I + LS +Q F Q LR + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKV 127
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-------------VYSYIQ 275
L + +IH DLKP N+L+ ++ ++K+ DFG A D + + +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 276 SRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+R+YR+PEV+L +Y+ A+D+WS GCI+AELFL P+FPG L + I+G
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 335 DYVLK 339
D L+
Sbjct: 245 DNDLR 249
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 427 VDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQNFKVDHHPGA 485
+D L+ ++ FDPAKR + +A HP++ + + P P P P F+ DH+ A
Sbjct: 283 IDLLQRMLVFDPAKRITAKEALEHPYL--QTYHDPNDEPEGEPIPP--SFFEFDHYKEA 337
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 19/224 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKK 165
RY + +LG G+FG+V C D AVK+I Q + L EV +L L
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQIL 223
D +I+++YE+F + + + E+ L+ E+I F + + + +Q+L
Sbjct: 84 ----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVL 136
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRS 281
G++ + I+H DLKPEN+LL + K A I+IIDFG + + + I + YY +
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
PEVL G Y D+WS G I+ L G P F GA+E+D+L+++
Sbjct: 197 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 172/388 (44%), Gaps = 95/388 (24%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY---QQALVEVSILTTLNKKYD 167
YI+K L+G G++G V +D VA+K + ++ L E++IL L Y
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY- 86
Query: 168 REDKHHIVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
I+R+Y+ + L I E+ DS+L +L K F L+ ++ +
Sbjct: 87 ------IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNL 138
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--------------- 267
L G + + ++GIIH DLKP N LL + +K+ DFG A T +
Sbjct: 139 LLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 268 ----------RTVYSYIQSRYYRSPE-VLLGYQYTTAIDMWSFGCIVAELFLGL------ 310
+ + S++ +R+YR+PE +LL YT +ID+WS GCI AEL L
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255
Query: 311 -----PLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIG 365
PLFPG+S F L PD K+ S + + + NI IG
Sbjct: 256 PTNRFPLFPGSSCFPL-----------SPDRNSKKVHEKSNRDQ-LNIIFNI------IG 297
Query: 366 GRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLA 425
T E + + + KP + K + +P+RK ++++ K I
Sbjct: 298 --------TPTEDDLKNINKPEVIK----------YIKLFPHRKPINLK--QKYPSISDD 337
Query: 426 LVDFLKGLVEFDPAKRWSPFQASRHPFV 453
++ L+ +++F+P KR + QA HP++
Sbjct: 338 GINLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 23/241 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYD 167
Y + + +G+G +G V+ VA+K I N ++ L E+ IL K +
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKIL----KHFK 111
Query: 168 REDKHHIVRIYEYFVCQ---RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
++ I I V + + + +L++S+L+++I + + L+L V+ F Q+LR
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLR 169
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CT----EDRTVYSYIQSR 277
GL + A +IH DLKP N+L+ + E+KI DFG A CT + Y+ +R
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 278 YYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
+YR+PE++L ++YT AID+WS GCI E+ LFPG + L+ ++ +LG P
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286
Query: 337 V 337
+
Sbjct: 287 I 287
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 19/224 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKK 165
RY + +LG G+FG+V C D AVK+I Q + L EV +L L
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 89
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQIL 223
D +I+++YE+F + + + E+ L+ E+I F + + + +Q+L
Sbjct: 90 ----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVL 142
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRS 281
G++ + I+H DLKPEN+LL + K A I+IIDFG + + + I + YY +
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
PEVL G Y D+WS G I+ L G P F GA+E+D+L+++
Sbjct: 203 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKK 165
RY + +LG G+FG+V C D AVK+I Q + L EV +L L
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
D +I ++YE+F + + + E+ L++ I I+ R + ++ +Q+L
Sbjct: 84 ----DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARII-RQVLS 137
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRSP 282
G++ I+H DLKPEN+LL + K A I+IIDFG + + I + YY +P
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAP 197
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
EVL G Y D+WS G I+ L G P F GA+E+D+L+++
Sbjct: 198 EVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 16/247 (6%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E + Y+ +G G +G V D VA+K + + ++A E+ +L +
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLS--IVQLFSK 220
+ +++ + + F L ++ + + G+ S +Q
Sbjct: 99 QHE-------NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY 151
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR 280
Q+L+GL + AG++H DLKP N+ + + E+KI+DFG A D + Y+ +R+YR
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHADAEMTGYVVTRWYR 208
Query: 281 SPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
+PEV+L + Y +D+WS GCI+AE+ G LF G D L +++++ G ++V K
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268
Query: 340 EAKNTSK 346
+K
Sbjct: 269 LNDKAAK 275
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 16/247 (6%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTL 162
E + Y+ +G G +G V D VA+K + + ++A E+ +L +
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLS--IVQLFSK 220
+ +++ + + F L ++ + + GL S +Q
Sbjct: 81 QHE-------NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY 133
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR 280
Q+L+GL + AG++H DLKP N+ + + E+KI+DFG A D + Y+ +R+YR
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHADAEMTGYVVTRWYR 190
Query: 281 SPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339
+PEV+L + Y +D+WS GCI+AE+ G LF G D L +++++ G ++V K
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250
Query: 340 EAKNTSK 346
+K
Sbjct: 251 LNDKAAK 257
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 26/220 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHH 173
LG G +G+V C D + A+KII+ + + L EV++L L D +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-------DHPN 97
Query: 174 IVRIYEYFVCQRHLCI---CF---ELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
I+++Y++F +R+ + C+ EL D E+I F + +++ KQ+L G++
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFD----EIIHRMKFNEVDAAVI---IKQVLSGVT 150
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTED-RTVYSYIQSRYYRSPEVL 285
L I+H DLKPEN+LL + K A IKI+DFG SA E+ + + + + YY +PEVL
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
+Y D+WS G I+ L G P F G ++ ++LR++
Sbjct: 211 RK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 62/262 (23%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKY 166
RY ++ L+G G++G V + +D VA+K I ++ L E++IL LN
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD- 112
Query: 167 DREDKHHIVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
H+V++ + + + L + E+ DS+ +L + + L+ ++
Sbjct: 113 ------HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY--LTELHIKTLLYN 164
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED-------------- 267
+L G+ + AGI+H DLKP N C + +K+ DFG A T D
Sbjct: 165 LLVGVKYVHSAGILHRDLKPAN---CLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 268 ----------------RTVYSYIQSRYYRSPE-VLLGYQYTTAIDMWSFGCIVAELFLGL 310
R + ++ +R+YR+PE +LL YT AID+WS GCI AEL +
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Query: 311 -----------PLFPGASEFDL 321
PLFPG+S F L
Sbjct: 282 KENVAYHADRGPLFPGSSCFPL 303
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTLNKK 165
RY LG G +G+V C D + A+KIIK L EV++L L
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL--- 78
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQIL 223
D +I+++YE+F +R+ + E+ L+ E+I F + +++ KQ+L
Sbjct: 79 ----DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQVL 131
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSYIQSRYYRS 281
G + L I+H DLKPEN+LL + + A IKI+DFG + + + + + YY +
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR-ILGAQPPDY--VL 338
PEVL +Y D+WS G I+ L G P F G ++ ++L+R+ + PPD+ V
Sbjct: 192 PEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVS 250
Query: 339 KEAKNTSKFF 348
EAK K
Sbjct: 251 DEAKQLVKLM 260
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 22/250 (8%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTLNKK 165
RY LG G +G+V C D + A+KIIK L EV++L L
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL--- 61
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQIL 223
D +I+++YE+F +R+ + E+ L+ E+I F + +++ KQ+L
Sbjct: 62 ----DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQVL 114
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTE-DRTVYSYIQSRYYRS 281
G + L I+H DLKPEN+LL + + A IKI+DFG SA E + + + YY +
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR-ILGAQPPDY--VL 338
PEVL +Y D+WS G I+ L G P F G ++ ++L+R+ + PPD+ V
Sbjct: 175 PEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVS 233
Query: 339 KEAKNTSKFF 348
EAK K
Sbjct: 234 DEAKQLVKLM 243
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 129/239 (53%), Gaps = 30/239 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT--LNKKYDR 168
Y V+ + G++G V D+E VA+K + N + + V+IL+ L K+ R
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRT----VNILSDSFLCKRVLR 78
Query: 169 EDK-----HH--IVRIYEYFV-----CQRHLCICFELLDSNLYELIKINHFRGLSLS--I 214
E + HH I+ + + FV L + EL+ ++L ++I H + + +S
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVISPQH 135
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYS 272
+Q F IL GL +L +AG++H DL P NILL + +I I DF A T D
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN---NDITICDFNLAREDTADANKTH 192
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
Y+ R+YR+PE+++ ++ +T +DMWS GC++AE+F LF G++ ++ L +++ ++G
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 60/259 (23%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY---QQALVEVSILTTLNKKYD 167
Y +K L+G G++G V +D N VA+K + ++ L E++IL L Y
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY- 88
Query: 168 REDKHHIVRIYEYFVCQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQI 222
I+R+++ + + L I E+ DS+L +L K F L+ V+ +
Sbjct: 89 ------IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNL 140
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT--EDRTVY--------- 271
L G + ++GIIH DLKP N C + +KI DFG A T D+ ++
Sbjct: 141 LLGEKFIHESGIIHRDLKPAN---CLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 272 -----------------SYIQSRYYRSPE-VLLGYQYTTAIDMWSFGCIVAELFLGL--- 310
S++ +R+YR+PE +LL YT +ID+WS GCI AEL +
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
Query: 311 --------PLFPGASEFDL 321
PLFPG+S F L
Sbjct: 258 INNPTNRFPLFPGSSCFPL 276
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 129/239 (53%), Gaps = 30/239 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT--LNKKYDR 168
Y V+ + G++G V D+E VA+K + N + + V+IL+ L K+ R
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRT----VNILSDSFLCKRVLR 78
Query: 169 EDK-----HH--IVRIYEYFV-----CQRHLCICFELLDSNLYELIKINHFRGLSLS--I 214
E + HH I+ + + FV L + EL+ ++L ++I H + + +S
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVISPQH 135
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYS 272
+Q F IL GL +L +AG++H DL P NILL + +I I DF A T D
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN---NDITICDFNLAREDTADANKTH 192
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330
Y+ R+YR+PE+++ ++ +T +DMWS GC++AE+F LF G++ ++ L +++ ++G
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG+V K + E + A K+I + + +VE+ IL + D +IV
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-------DHPNIV 97
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
++ + F + +L I E + + + R L+ S +Q+ KQ L L+ L D II
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGYQ--- 289
H DLK NIL +IK+ DFG + RT+ S+I + Y+ +PEV++
Sbjct: 158 HRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 290 --YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I ++PP
Sbjct: 215 RPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPP 258
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVT 454
DFLK +E + RW+ Q +HPFVT
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 27/226 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK--------------NQPAYYQQALVEVSILTTL 162
LG G +G+V C + +S A+K+IK N ++++ E+S+L +L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
D +I+++++ F +++ + E + L+E I IN + + KQ
Sbjct: 104 -------DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-INRHKFDECDAANIM-KQ 154
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYY 279
IL G+ L I+H D+KPENILL IKI+DFG S ++D + + + YY
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
+PEV L +Y D+WS G I+ L G P F G ++ D+++++
Sbjct: 215 IAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 38/241 (15%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVK-IIKNQPAYYQQALVEVSILTTLNKKYDR 168
RY+ LG G G V D + + VA+K I+ P + AL E+ I+ R
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIR-------R 64
Query: 169 EDKHHIVRIYEYF--------------VCQRHLCICFELLDSNLYELIKINHFRG-LSLS 213
D +IV+++E + I E ++++L +++ +G L
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE----QGPLLEE 120
Query: 214 IVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY 273
+LF Q+LRGL + A ++H DLKP N+ + T + +KI DFG A D YS+
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPH-YSH 177
Query: 274 -------IQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
+ +++YRSP +LL YT AIDMW+ GCI AE+ G LF GA E + ++ +
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 326 I 326
+
Sbjct: 238 L 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHH 173
++LG G FGQV KC + +A KIIK + ++ + E+S++ L D +
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-------DHAN 147
Query: 174 IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232
++++Y+ F + + + E +D L++ I + L + LF KQI G+ +
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI-LFMKQICEGIRHMHQM 206
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLLGYQY 290
I+H DLKPENI LC + +IKIIDFG A + + + +PEV + Y +
Sbjct: 207 YILHLDLKPENI-LCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV-VNYDF 264
Query: 291 TTA-IDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
+ DMWS G I L GL F G ++ + L ++
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG+V K + E + A K+I + + +VE+ IL + D +IV
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-------DHPNIV 97
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
++ + F + +L I E + + + R L+ S +Q+ KQ L L+ L D II
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGYQ--- 289
H DLK NIL +IK+ DFG + R + S+I + Y+ +PEV++
Sbjct: 158 HRDLKAGNILFTLD---GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 290 --YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I ++PP
Sbjct: 215 RPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPP 258
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVT 454
DFLK +E + RW+ Q +HPFVT
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG+V K + E + A K+I + + +VE+ IL + D +IV
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-------DHPNIV 97
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
++ + F + +L I E + + + R L+ S +Q+ KQ L L+ L D II
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGYQ--- 289
H DLK NIL +IK+ DFG + R + +I + Y+ +PEV++
Sbjct: 158 HRDLKAGNILFTLD---GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 290 --YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I ++PP
Sbjct: 215 RPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPP 258
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVT 454
DFLK +E + RW+ Q +HPFVT
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTLNKKY 166
+I+ +LG G+FG+V + N F A+K +K +VE +L+
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL----- 73
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILR 224
+ + ++ F + +L E L+ +Y + + F LS ++ +I+
Sbjct: 74 -AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIIL 129
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE----DRTVYSYIQSRYYR 280
GL L GI++ DLK +NILL K IKI DFG C E D + + Y
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFG-MCKENMLGDAKTNXFCGTPDYI 185
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340
+PE+LLG +Y ++D WSFG ++ E+ +G F G E +L IR+ P ++ KE
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-IRMDNPFYPRWLEKE 244
Query: 341 AKN 343
AK+
Sbjct: 245 AKD 247
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G+F KC + N AVKII K A Q+ + + + E +IV
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLC---------EGHPNIV 69
Query: 176 RIYEYFVCQRHLCICFELLDS-NLYELIKIN-HFRGLSLSIVQLFSKQILRGLSLLKDAG 233
+++E F Q H + ELL+ L+E IK HF S + ++++ +S + D G
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM---RKLVSAVSHMHDVG 126
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGYQY 290
++H DLKPEN+L EIKIIDFG A +++ + + + +Y +PE+L Y
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 291 TTAIDMWSFGCIVAELFLG 309
+ D+WS G I+ + G
Sbjct: 187 DESCDLWSLGVILYTMLSG 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 24/238 (10%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTLNKKYDREDK 171
+LG G+FG+V + N F A+K +K +VE +L+ +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL------AWEH 78
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
+ ++ F + +L E L+ +Y + + F LS ++ +I+ GL L
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFL 135
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE----DRTVYSYIQSRYYRSPEVL 285
GI++ DLK +NILL K IKI DFG C E D + + Y +PE+L
Sbjct: 136 HSKGIVYRDLKLDNILL---DKDGHIKIADFG-MCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343
LG +Y ++D WSFG ++ E+ +G F G E +L IR+ P ++ KEAK+
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-IRMDNPFYPRWLEKEAKD 248
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 96
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 97 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ S++ + Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 120 GTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIY 178
G FG+V K + E + A K+I + + +VE+ IL + D +IV++
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-------DHPNIVKLL 73
Query: 179 EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCD 238
+ F + +L I E + + + R L+ S +Q+ KQ L L+ L D IIH D
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 239 LKPENILLCTSVKPAEIKIIDFGSACTEDRTVY----SYIQSRYYRSPEVLLGYQ----- 289
LK NIL +IK+ DFG + RT S+I + Y+ +PEV++
Sbjct: 134 LKAGNILFTLD---GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I ++PP
Sbjct: 191 YDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEPP 232
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVT 454
DFLK +E + RW+ Q +HPFVT
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG+V K + E + A K+I+ + + +VE+ IL T + Y IV
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY-------IV 79
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
++ + L I E + I + RGL+ +Q+ +Q+L L+ L II
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGYQ--- 289
H DLK N+L+ +I++ DFG + +T+ S+I + Y+ +PEV++
Sbjct: 140 HRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 290 --YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I + PP
Sbjct: 197 TPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIAKSDPP 240
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG+V K + E + A K+I+ + + +VE+ IL T + Y IV
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY-------IV 71
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
++ + L I E + I + RGL+ +Q+ +Q+L L+ L II
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGYQ--- 289
H DLK N+L+ +I++ DFG + +T+ S+I + Y+ +PEV++
Sbjct: 132 HRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 290 --YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + E+ + P E + +R +++I + PP
Sbjct: 189 TPYDYKADIWSLGITLIEMA---QIEPPHHELNPMRVLLKIAKSDPP 232
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 118/268 (44%), Gaps = 45/268 (16%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G FGQV K +A + + A+K I++ L EV +L +LN +Y +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY-------VV 65
Query: 176 RIYEYFVCQRH-------------LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R Y ++ +R+ L I E ++ LY+LI + +LF +Q
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQ 124
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------------ 269
IL LS + GIIH DLKP NI + S +KI DFG A R+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 270 -----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLR 323
+ S I + Y + EVL G Y IDM+S G I E+ P G ++L+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILK 239
Query: 324 RMIRILGAQPPDYVLKEAKNTSKFFKCI 351
++ + PPD+ + K K + +
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLL 267
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 93
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 94 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ +++ + Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 98
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 99 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 157 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 96
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 97 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 118/268 (44%), Gaps = 45/268 (16%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G FGQV K +A + + A+K I++ L EV +L +LN +Y +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY-------VV 65
Query: 176 RIYEYFVCQRH-------------LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R Y ++ +R+ L I E ++ LY+LI + +LF +Q
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQ 124
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------------ 269
IL LS + GIIH DLKP NI + S +KI DFG A R+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 270 -----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLR 323
+ S I + Y + EVL G Y IDM+S G I E+ P G ++L+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILK 239
Query: 324 RMIRILGAQPPDYVLKEAKNTSKFFKCI 351
++ + PPD+ + K K + +
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLL 267
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 93
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 94 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 93
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 94 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 100
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 101 KLY--FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 159 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 73
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 74 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 132 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + L+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ S++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ + D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 92
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 93 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ S++ + Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 76
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + + + + I+ S +LRGL+ L++
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQV-LKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y +PE L G Y+
Sbjct: 136 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSV 192
Query: 293 AIDMWSFGCIVAELFLG 309
D+WS G + EL +G
Sbjct: 193 QSDIWSMGLSLVELAVG 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 72
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 73 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 131 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 71
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 72 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 130 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
++ +I ++LG G F +V A+K IK PA+ +L E+++L KK
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVL----KKI 63
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-SLSIVQLFSKQILRG 225
E+ IV + + + H + +L+ EL RG+ + L +Q+L
Sbjct: 64 KHEN---IVTLEDIYESTTHYYLVMQLVSGG--ELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-IQSRYYRSPEV 284
+ L + GI+H DLKPEN+L T + ++I I DFG + E + S + Y +PEV
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEV 178
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
L Y+ A+D WS G I L G P F +E L ++
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 70
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 71 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 129 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 17/228 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G + +V + + N V VKI+K P + E+ IL L + IV+
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILK--PVKKNKIKREIKILENLRGGPNIITLADIVK 102
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIH 236
R + FE +++ ++ + ++ L+ ++ + +IL+ L GI+H
Sbjct: 103 D----PVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 237 CDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEVLLGYQ-YTTA 293
D+KP N+++ + ++++ID+G A + + SRY++ PE+L+ YQ Y +
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 294 IDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMIRILGAQPP-DYVLK 339
+DMWS GC++A + F P F G +D L R+ ++LG + DY+ K
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH- 173
+L+G+GT+GQV K + A+K++ ++ E+++L KKY HH
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINML----KKYS----HHR 81
Query: 174 -IVRIYEYFVCQR------HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRG 225
I Y F+ + L + E + ++ +LIK L + ++ILRG
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSP 282
LS L +IH D+K +N+LL + AE+K++DFG + DRTV ++I + Y+ +P
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 283 EVLLGYQ-----YTTAIDMWSFGCIVAELFLGLP 311
EV+ + Y D+WS G E+ G P
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F + + A+KI++ + + +V +T R D V
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 93
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 94 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 77
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 78 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 136 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E + ++I++
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +D+LG G F +V D VA+K I + ++ +E I L+K
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI-AVLHKI----- 73
Query: 171 KH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
KH +IV + + + HL + +L+ L++ I F + +F Q+L +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKY 131
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLL 286
L D GI+H DLKPEN+L + + ++I I DFG + ED + + + Y +PEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 287 GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Y+ A+D WS G I L G P F ++ L ++++
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVTGE 456
DF++ L+E DP KR++ QA +HP++ G+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 92
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 93 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E+ + +++I++
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 128
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 187
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 188 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 244
Query: 293 AIDMWSFGCIVAELFLG-LPL-FPGASEFDLL 322
D+WS G + E+ +G P+ P A E +L+
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G+F V + + A+KI++ + + +V +T R D V
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFV 95
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y F Q + F L + EL+K I + + ++ +I+ L L GI
Sbjct: 96 KLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPEVLLGYQ 289
IH DLKPENILL + I+I DFG+A ++ ++ + Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ D+W+ GCI+ +L GLP F +E + ++I++
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV--EVSILTTLNKKYDR 168
Y + + LG G FG V +C + K I N P + V E+SI+ L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDKYTVKNEISIMNQL------ 105
Query: 169 EDKHH--IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRG 225
HH ++ +++ F + + + E L L++ I ++ ++ + +Q G
Sbjct: 106 ---HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN-YMRQACEG 161
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRSPE 283
L + + I+H D+KPENI +C + K + +KIIDFG A D V + + +PE
Sbjct: 162 LKHMHEHSIVHLDIKPENI-MCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
++ DMW+ G + L GL F G + + L+ + R
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR 264
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+L+ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +D+LG G F +V D VA+K I + ++ +E I L+K
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AVLHKI----- 73
Query: 171 KH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
KH +IV + + + HL + +L+ L++ I F + +F Q+L +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKY 131
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLL 286
L D GI+H DLKPEN+L + + ++I I DFG + ED + + + Y +PEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 287 GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Y+ A+D WS G I L G P F ++ L ++++
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVTGE 456
DF++ L+E DP KR++ QA +HP++ G+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +D+LG G F +V D VA+K I + ++ +E I L+K
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AVLHKI----- 73
Query: 171 KH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
KH +IV + + + HL + +L+ L++ I F + +F Q+L +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKY 131
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLL 286
L D GI+H DLKPEN+L + + ++I I DFG + ED + + + Y +PEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 287 GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Y+ A+D WS G I L G P F ++ L ++++
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVTGE 456
DF++ L+E DP KR++ QA +HP++ G+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +D+LG G F +V D VA+K I + ++ +E I L+K
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI-AVLHKI----- 73
Query: 171 KH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
KH +IV + + + HL + +L+ L++ I F + +F Q+L +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKY 131
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLL 286
L D GI+H DLKPEN+L + + ++I I DFG + ED + + + Y +PEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 287 GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Y+ A+D WS G I L G P F ++ L ++++
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVTGE 456
DF++ L+E DP KR++ QA +HP++ G+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 181
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 242 VRIAKVLGTEDLYDYIDK 259
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 181
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 242 VRIAKVLGTEDLYDYIDK 259
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 187
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 188 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 248 VRIAKVLGTEDLYDYIDK 265
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC----TEDRTV 270
++ + ++L+ L GI+H D+KP N+++ K ++++ID+G A ++ V
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNV 191
Query: 271 YSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMIRI 328
+ SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L R+ ++
Sbjct: 192 --RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 249
Query: 329 LGAQ 332
LG +
Sbjct: 250 LGTE 253
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 180
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 241 VRIAKVLGTEDLYDYIDK 258
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 207 FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--C 264
++ L+ ++ + +IL+ L GI+H D+KP N+++ + ++++ID+G A
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
Query: 265 TEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLL 322
+ + SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 323 RRMIRILGAQPP-DYVLK 339
R+ ++LG + DY+ K
Sbjct: 243 VRIAKVLGTEDLYDYIDK 260
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Query: 198 LYELIKINHFRGLSLSI----VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253
++E + F+ L ++ ++ + +IL+ L GI+H D+KP N+++ +
Sbjct: 112 VFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-- 169
Query: 254 EIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLG 309
++++ID+G A + + SRY++ PE+L+ YQ Y ++DMWS GC++A + F
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 310 LPLFPGASEFDLLRRMIRILGAQPP-DYVLK 339
P F G +D L R+ ++LG + DY+ K
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC----TEDRTV 270
++ + ++L+ L GI+H D+KP N+++ K ++++ID+G A ++ V
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNV 196
Query: 271 YSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMIRI 328
+ SRY++ PE+L+ YQ Y ++DMWS GC++A + F P F G +D L R+ ++
Sbjct: 197 --RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 254
Query: 329 LGAQ 332
LG +
Sbjct: 255 LGTE 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 116/268 (43%), Gaps = 45/268 (16%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
+LG G FGQV K +A + + A+K I++ L EV +L +LN +Y +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQY-------VV 65
Query: 176 RIYEYFVCQRH-------------LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R Y ++ +R+ L I E ++ LY+LI + +LF +Q
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-RQ 124
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT------------ 269
IL LS + GIIH +LKP NI + S +KI DFG A R+
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 270 -----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLR 323
+ S I + Y + EVL G Y ID +S G I E P G ++L+
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILK 239
Query: 324 RMIRILGAQPPDYVLKEAKNTSKFFKCI 351
++ + PPD+ + K K + +
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLL 267
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 111 YIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
Y + + LG G FG V + + A N+F A ++ + + E+ ++ L
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL------- 105
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +V +++ F + + +E + L+E + H + V+ + +Q+ +GL
Sbjct: 106 -RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLC 163
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVL 285
+ + +H DLKPENI+ T + E+K+IDFG D ++V + + +PEV
Sbjct: 164 HMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
G DMWS G + L GL F G ++ + LR +
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA+KII + PA + E+ IL
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET--EIEIL 75
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ K+ + L + +L+
Sbjct: 76 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLY 125
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 111 YIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRE 169
Y + + LG G FG V + + A N+F A ++ + + E+ ++ L
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL------- 211
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +V +++ F + + +E + L+E + H + V+ + +Q+ +GL
Sbjct: 212 -RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLC 269
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVL 285
+ + +H DLKPENI+ T + E+K+IDFG D ++V + + +PEV
Sbjct: 270 HMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
G DMWS G + L GL F G ++ + LR +
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYD 167
Y VK+ LG G F V +C A KII + +Q+ E I L
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP-- 88
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
+IVR+++ + + F+L+ L+E I F S + +QIL +
Sbjct: 89 -----NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 141
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
+ GI+H +LKPEN+LL + K A +K+ DFG A + + + + Y SPEV
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y+ +D+W+ G I+ L +G P F
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA+KII + PA + E+ IL
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET--EIEIL 69
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ K+ + L + +L+
Sbjct: 70 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLY 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA+KII + PA + E+ IL
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET--EIEIL 68
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ K+ + L + +L+
Sbjct: 69 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLY 118
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 93
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 152
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 153 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 209
Query: 293 AIDMWSFGCIVAELFLG---LPLFPGASEFDLL 322
D+WS G + E+ +G +P P A E +L+
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPP-PDAKELELM 241
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 69
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 128
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D ++ +R Y SPE L G Y+
Sbjct: 129 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSV 185
Query: 293 AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
D+WS G + E+ +G P + F+LL ++ +PP
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN----EPP 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 66
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 293 AIDMWSFGCIVAELFLG---LPLFPGASEFDLL 322
D+WS G + E+ +G +P P A E +L+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPP-PDAKELELM 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA+KII + PA + E+ IL
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET--EIEIL 69
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ K+ + L + +L+
Sbjct: 70 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLY 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 66
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 293 AIDMWSFGCIVAELFLG 309
D+WS G + E+ +G
Sbjct: 183 QSDIWSMGLSLVEMAVG 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 24/235 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--IIKNQPAYY-QQALVEVSILTTLNKKYDREDKHH 173
+G GTFG+V K + VA+K +++N+ + AL E+ IL L E+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK----HENVVN 81
Query: 174 IVRIYE-----YFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
++ I Y C+ + + F+ + +L L+ N +LS ++ + +L GL
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-------CTEDRTVYSYIQSRYYRS 281
+ I+H D+K N+L+ + +K+ DFG A ++ + + + +YR
Sbjct: 141 IHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PE+LLG + Y ID+W GCI+AE++ P+ G +E L + ++ G+ P+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 66
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 293 AIDMWSFGCIVAELFLG---LPLFPGASEFDLL 322
D+WS G + E+ +G +P P A E +L+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPP-PDAKELELM 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA+KII + PA + E+ IL
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET--EIEIL 69
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ K+ + L + +L+
Sbjct: 70 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLY 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 85
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 144
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 145 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 201
Query: 293 AIDMWSFGCIVAELFLG-LPLFPGASEFDLLRRMIRILGAQPP 334
D+WS G + E+ +G P+ G+ + + I+ PP
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPP 244
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 56
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 113
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC---TEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG +C + RT S
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSCHAPSSRRTTLSGT 170
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 171 LD--YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 227
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 228 DFVTEGARD 236
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 66
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 293 AIDMWSFGCIVAELFLG---LPLFPGASEFDLL 322
D+WS G + E+ +G +P P A E +L+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPP-PDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G G V K +A K+I + +PA Q + E+ +L N Y I
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-------I 66
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-G 233
V Y F + IC E +D + + R + I+ S +++GL+ L++
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
I+H D+KP NIL+ + EIK+ DFG S D S++ +R Y SPE L G Y+
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 293 AIDMWSFGCIVAELFLG---LPLFPGASEFDLL 322
D+WS G + E+ +G +P P A E +L+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPP-PDAKELELM 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA++II + PA + E+ IL
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET--EIEIL 194
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ + N + L + +L+
Sbjct: 195 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLY 244
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 346
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 24/235 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--IIKNQPAYY-QQALVEVSILTTLNKKYDREDKHH 173
+G GTFG+V K + VA+K +++N+ + AL E+ IL L E+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK----HENVVN 81
Query: 174 IVRIYE-----YFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
++ I Y C+ + + F+ + +L L+ N +LS ++ + +L GL
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-------CTEDRTVYSYIQSRYYRS 281
+ I+H D+K N+L+ + +K+ DFG A ++ + + + +YR
Sbjct: 141 IHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PE+LLG + Y ID+W GCI+AE++ P+ G +E L + ++ G+ P+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 24/235 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--IIKNQPAYY-QQALVEVSILTTLNKKYDREDKHH 173
+G GTFG+V K + VA+K +++N+ + AL E+ IL L E+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK----HENVVN 81
Query: 174 IVRIYE-----YFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
++ I Y C+ + + F+ + +L L+ N +LS ++ + +L GL
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-------CTEDRTVYSYIQSRYYRS 281
+ I+H D+K N+L+ + +K+ DFG A ++ + + + +YR
Sbjct: 141 IHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PE+LLG + Y ID+W GCI+AE++ P+ G +E L + ++ G+ P+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSIL 159
YI+ LG G G+V ++ + VA++II + PA + E+ IL
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET--EIEIL 208
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
LN I++I +F + + I EL++ L++ + N + L + +L+
Sbjct: 209 KKLNHPC-------IIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLY 258
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
Q+L + L + GIIH DLKPEN+LL + + IKI DFG + E + + +
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 277 RYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
Y +PEVL+ Y A+D WS G I LF+ L +P SE
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE 360
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 24/235 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVK--IIKNQPAYY-QQALVEVSILTTLNKKYDREDKHH 173
+G GTFG+V K + VA+K +++N+ + AL E+ IL L E+ +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK----HENVVN 80
Query: 174 IVRIYE-----YFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
++ I Y C+ + + F+ + +L L+ N +LS ++ + +L GL
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-------CTEDRTVYSYIQSRYYRS 281
+ I+H D+K N+L+ + +K+ DFG A ++ + + + +YR
Sbjct: 140 IHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 282 PEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
PE+LLG + Y ID+W GCI+AE++ P+ G +E L + ++ G+ P+
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYD 167
Y VK+ LG G F V +C A KII + +Q+ E I L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP-- 65
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
+IVR+++ + + F+L+ L+E I F S + +QIL +
Sbjct: 66 -----NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 118
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
+ GI+H +LKPEN+LL + K A +K+ DFG A + + + + Y SPEV
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y+ +D+W+ G I+ L +G P F
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNK 164
Q Y + + LG G F V +C A KII + +Q+ E I L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL-- 78
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQI 222
KH +IVR+++ + H + F+L+ L+E I + S + +QI
Sbjct: 79 ------KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQI 130
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYY 279
L + G++H DLKPEN+LL + +K A +K+ DFG A E + + + + Y
Sbjct: 131 LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 190
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
SPEVL Y +D+W+ G I+ L +G P F
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 35/194 (18%)
Query: 168 REDKH-HIVRIYEYFV--CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL------- 217
RE KH +++ + + F+ R + + F+ + +L+ +IK + + VQL
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLC-TSVKPAEIKIIDFGSA----------CTE 266
QIL G+ L ++H DLKP NIL+ + +KI D G A
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 267 DRTVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASE------- 318
D V ++ +YR+PE+LLG + YT AID+W+ GCI AEL P+F E
Sbjct: 193 DPVVVTF----WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248
Query: 319 --FDLLRRMIRILG 330
D L R+ ++G
Sbjct: 249 YHHDQLDRIFNVMG 262
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYD 167
Y VK+ LG G F V +C A KII + +Q+ E I L
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP-- 64
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
+IVR+++ + + F+L+ L+E I F S + +QIL +
Sbjct: 65 -----NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 117
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
+ GI+H +LKPEN+LL + K A +K+ DFG A + + + + Y SPEV
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 177
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y+ +D+W+ G I+ L +G P F
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYD 167
Y VK+ LG G F V +C A KII + +Q+ E I L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP-- 65
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
+IVR+++ + + F+L+ L+E I F S + +QIL +
Sbjct: 66 -----NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 118
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
+ GI+H +LKPEN+LL + K A +K+ DFG A + + + + Y SPEV
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y+ +D+W+ G I+ L +G P F
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 77/293 (26%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-KNQ-----PAYYQQALVEVSIL 159
E Q++Y +K +G G++G V + + + A+KI+ KN+ P ++ EV ++
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 160 TTLNKKYDREDKHH--IVRIYEYFVCQRHLCICFEL------LDS-NLY----------E 200
L HH I R+YE + ++++C+ EL LD N++ +
Sbjct: 83 KKL---------HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 201 LIK-----------------INHFRGLSLSIVQ---LFS---KQILRGLSLLKDAGIIHC 237
++K I+ FR SL VQ L S +QI L L + GI H
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRE-SLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 238 DLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYY-----------RSPEVL- 285
D+KPEN L T+ K EIK++DFG + + Y YY +PEVL
Sbjct: 193 DIKPENFLFSTN-KSFEIKLVDFGLS----KEFYKLNNGEYYGMTTKAGTPYFVAPEVLN 247
Query: 286 -LGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQPPDY 336
Y D WS G ++ L +G FPG ++ D + +++ + L + P+Y
Sbjct: 248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY 300
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALV-EVSILTTLNK 164
Y + +++G G F V +C + E AVKI+ + P + L E SI L
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 83
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFELLDSN--LYELIK-INHFRGLSLSIVQLFSK 220
KH HIV + E + L + FE +D +E++K + S ++ + +
Sbjct: 84 ------KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT---VYSYIQSR 277
QIL L D IIH D+KPEN+LL + A +K+ DFG A + + +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
++ +PEV+ Y +D+W G I+ L G F G E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
+ ++ + K+ LG G F +V + AVK I + +++ +E I
Sbjct: 19 DIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL---- 74
Query: 166 YDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQIL 223
R+ KH +IV + + + HL + +L+ L++ I F + +Q+L
Sbjct: 75 --RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVL 130
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSYIQSRYYRS 281
+ L GI+H DLKPEN+L + + ++I I DFG + E + + + + Y +
Sbjct: 131 DAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVA 190
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
PEVL Y+ A+D WS G I L G P F ++ L ++++
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK 236
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 428 DFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQNF 477
DF++ L+E DP KR++ QA+RHP++ G+ T + E+ + +NF
Sbjct: 255 DFIRNLMEKDPNKRYTCEQAARHPWIAGD--TALNKNIHESVSAQIRKNF 302
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 29/256 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 28 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 81
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 138
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 139 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 193
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 252
Query: 335 DYVLKEAKN-TSKFFK 349
D+V + A++ S+ K
Sbjct: 253 DFVTEGARDLISRLLK 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 126/257 (49%), Gaps = 29/257 (11%)
Query: 107 TQRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161
++R++ ++D LG G FG V + + +A+K++ ++ L + +
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEHQ 58
Query: 162 LNKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
L ++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-- 116
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSY 273
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 117 -YITELANALSYCHSKRVIHRDIKPENLLLGSN---GELKIADFGWSVHAPSSRRT--TL 170
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ Y PE++ G + +D+WS G + E +G+P F + + RR+ R+
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-EFTF 229
Query: 334 PDYVLKEAKN-TSKFFK 349
PD+V + A++ S+ K
Sbjct: 230 PDFVTEGARDLISRLLK 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 33/295 (11%)
Query: 116 LLGHGTFG---QVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR---- 168
+LG G +G QV K A A+K++K +A++ + T + K +R
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-------KAMIVRNAKDTAHTKAERNILE 76
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-KQILRGL 226
E KH IV + F L + E L EL G+ + F +I L
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE---DRTV-YSYIQSRYYRSP 282
L GII+ DLKPENI+L +K+ DFG C E D TV +++ + Y +P
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFG-LCKESIHDGTVTHTFCGTIEYMAP 190
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342
E+L+ + A+D WS G ++ ++ G P F G + + ++++ PP Y+ +EA+
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP-YLTQEAR 249
Query: 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYE---ARELK---KPLIGKE 391
+ K + + G G A+ I +E AR+++ KPL+ E
Sbjct: 250 DLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSE 304
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R +VKD+ G G FG D + N VAVK I+ + E+ +N +
Sbjct: 17 DSDRYELVKDI-GAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHR 70
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E L+E +I + S + F +Q++
Sbjct: 71 SLRHP--NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLIS 126
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSP 282
G+S + H DLK EN LL S P +KI DFG A S + + Y +P
Sbjct: 127 GVSYAHAMQVAHRDLKLENTLLDGSPAP-RLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 283 EVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ--PPDYV 337
EVLL +Y + D+WS G + + +G F E R+ I RIL Q PDYV
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV--EVSILTTLN 163
E +Y++ + LG G FG V +C + K +K + Q LV E+SIL
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIAR 59
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQI 222
+ +I+ ++E F L + FE + +++E I + F IV + Q+
Sbjct: 60 HR-------NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVS-YVHQV 111
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE---DRTVYSYIQSRYY 279
L L I H D++PENI+ T + + IKII+FG A D + YY
Sbjct: 112 CEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYY 170
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317
+PEV +TA DMWS G +V L G+ F +
Sbjct: 171 -APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL----VEVSILTTLNKKY 166
Y +++ +G G++G+V A K I P Y+ + + E+ I+ +L
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEIEIMKSL---- 80
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRG 225
D +I+R+YE F + + EL L+E ++ H R S K +L
Sbjct: 81 ---DHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSA 135
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRSPE 283
++ + H DLKPEN L T + +K+IDFG A + + + + + YY SP+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
VL G Y D WS G ++ L G P F ++ +++ ++
Sbjct: 196 VLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 236
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL----VEVSILTTLNKKY 166
Y +++ +G G++G+V A K I P Y+ + + E+ I+ +L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI---PKYFVEDVDRFKQEIEIMKSL---- 63
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRG 225
D +I+R+YE F + + EL L+E ++ H R S K +L
Sbjct: 64 ---DHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSA 118
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRYYRSPE 283
++ + H DLKPEN L T + +K+IDFG A + + + + + YY SP+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
VL G Y D WS G ++ L G P F ++ +++ ++
Sbjct: 179 VLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ---------QALVEV 156
E ++Y LG G FG V D E N V VK IK + + +E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 157 SILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
+IL+ R + +I+++ + F Q + E S L I+ L +
Sbjct: 81 AILS-------RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSYI 274
+Q++ + L+ IIH D+K ENI++ IK+IDFGSA +R Y++
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT---IKLIDFGSAAYLERGKLFYTFC 190
Query: 275 QSRYYRSPEVLLGYQYTT-AIDMWSFGCIVAEL 306
+ Y +PEVL+G Y ++MWS G + L
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 33/295 (11%)
Query: 116 LLGHGTFG---QVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR---- 168
+LG G +G QV K A A+K++K +A++ + T + K +R
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-------KAMIVRNAKDTAHTKAERNILE 76
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-KQILRGL 226
E KH IV + F L + E L EL G+ + F +I L
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE---DRTV-YSYIQSRYYRSP 282
L GII+ DLKPENI+L +K+ DFG C E D TV + + + Y +P
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFG-LCKESIHDGTVTHXFCGTIEYMAP 190
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342
E+L+ + A+D WS G ++ ++ G P F G + + ++++ PP Y+ +EA+
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP-YLTQEAR 249
Query: 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYE---ARELK---KPLIGKE 391
+ K + + G G A+ I +E AR+++ KPL+ E
Sbjct: 250 DLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSE 304
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH 173
K +LG G G+V +C+ A+K++ + P Q+ ++ + H
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE----------VDHHWQASGGPH 83
Query: 174 IVRIYEYFVCQRH----LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
IV I + + H L I E ++ L+ I+ + + + I +
Sbjct: 84 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQSRYYRSPEVLLG 287
L I H D+KPEN+L + K A +K+ DFG A T + + + YY +PEVL
Sbjct: 144 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP 203
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLF---PGASEFDLLRRMIRI 328
+Y + DMWS G I+ L G P F G + ++R IR+
Sbjct: 204 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLN-KKYDRE 169
Y + + LG G F V +C VK++ Q Y ++ L+ + +K +RE
Sbjct: 13 YQLFEELGKGAFSVVRRC----------VKVLAGQE--YAAMIINTKKLSARDHQKLERE 60
Query: 170 D------KH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
KH +IVR+++ + H + F+L+ L+E I + S + +Q
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQ 118
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRY 278
IL + G++H +LKPEN+LL + +K A +K+ DFG A E + + + +
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 178
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
Y SPEVL Y +D+W+ G I+ L +G P F
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 116 LLGHGTFGQV---AKCWDAEMNSFVAVKIIKNQPAYYQQAL---VEVSILTTLNKKYDRE 169
+LG G+FG+V K ++ A+K++K + + +E IL +N +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF--- 87
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSI------VQLFSKQIL 223
IV+++ F + L + + L + F LS + V+ + ++
Sbjct: 88 ----IVKLHYAFQTEGKLYLILDFLRGG-------DLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYR 280
L L GII+ DLKPENILL + IK+ DFG + ++ YS+ + Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ--PPDYVL 338
+PEV+ +T + D WSFG ++ E+ G F G D M IL A+ P ++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK---DRKETMTMILKAKLGMPQFLS 250
Query: 339 KEAKN 343
EA++
Sbjct: 251 PEAQS 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 19 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 72
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 73 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 129
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 130 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 184
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 243
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 244 DFVTEGARD 252
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH 173
K +LG G G+V +C+ A+K++ + P Q+ ++ + H
Sbjct: 15 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE----------VDHHWQASGGPH 64
Query: 174 IVRIYEYFVCQRH----LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
IV I + + H L I E ++ L+ I+ + + + I +
Sbjct: 65 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQSRYYRSPEVLLG 287
L I H D+KPEN+L + K A +K+ DFG A T + + + YY +PEVL
Sbjct: 125 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP 184
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLF---PGASEFDLLRRMIRI 328
+Y + DMWS G I+ L G P F G + ++R IR+
Sbjct: 185 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 123/255 (48%), Gaps = 25/255 (9%)
Query: 107 TQRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161
++R++ ++D LG G FG V + + +A+K++ ++ L + +
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEHQ 58
Query: 162 LNKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
L ++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-- 116
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQ 275
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 117 -YITELANALSYCHSKRVIHRDIKPENLLLGSN---GELKIADFGWSVHAPSSRRDTLCG 172
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
+ Y PE++ G + +D+WS G + E +G+P F + + RR+ R+ PD
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-EFTFPD 231
Query: 336 YVLKEAKN-TSKFFK 349
+V + A++ S+ K
Sbjct: 232 FVTEGARDLISRLLK 246
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 28 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 81
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 138
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS 276
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 139 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRDDLCGT 195
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 254
Query: 337 VLKEAKN-TSKFFK 349
V + A++ S+ K
Sbjct: 255 VTEGARDLISRLLK 268
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-----EVSILT 160
E + V +LLG G+F V + VA+K+I ++ A Y+ +V EV I
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-DKKAMYKAGMVQRVQNEVKIHC 66
Query: 161 TLNKKYDREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS 219
L KH I+ +Y YF ++ + E+ + N + S + + F
Sbjct: 67 QL--------KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 220 KQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED---RTVYSYIQS 276
QI+ G+ L GI+H DL N+LL + IKI DFG A Y+ +
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y SPE+ + D+WS GC+ L +G P F + + L +++ + + P +
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-LADYEMPSF 234
Query: 337 VLKEAKN 343
+ EAK+
Sbjct: 235 LSIEAKD 241
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R +VKD+ G G FG D + N VAVK I+ + E+ +N +
Sbjct: 16 DSDRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHR 69
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E L+E +I + S + F +Q++
Sbjct: 70 SLRHP--NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLIS 125
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSP 282
G+S + H DLK EN LL S P +KI DFG + S + + Y +P
Sbjct: 126 GVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 283 EVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ--PPDYV 337
EVLL +Y + D+WS G + + +G F E R+ I RIL Q PDYV
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 116 LLGHGTFGQV---AKCWDAEMNSFVAVKIIKNQPAYYQQAL---VEVSILTTLNKKYDRE 169
+LG G+FG+V K ++ A+K++K + + +E IL +N +
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF--- 88
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSI------VQLFSKQIL 223
IV+++ F + L + + L + F LS + V+ + ++
Sbjct: 89 ----IVKLHYAFQTEGKLYLILDFLRGG-------DLFTRLSKEVMFTEEDVKFYLAELA 137
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYR 280
L L GII+ DLKPENILL + IK+ DFG + ++ YS+ + Y
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 194
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ--PPDYVL 338
+PEV+ +T + D WSFG ++ E+ G F G D M IL A+ P ++
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK---DRKETMTMILKAKLGMPQFLS 251
Query: 339 KEAKNTSKFF 348
EA++ +
Sbjct: 252 PEAQSLLRML 261
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYDREDKH- 172
LG G F V +C A KII + +Q+ E I L KH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL--------KHP 63
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+IVR+++ + + F+L+ L+E I + S + +QIL ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESVNHCHL 121
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGY 288
GI+H DLKPEN+LL + K A +K+ DFG A + + + + + Y SPEVL
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLF 313
Y +DMW+ G I+ L +G P F
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R +VKD+ G G FG D + N VAVK I+ E+ +N +
Sbjct: 17 DSDRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHR 70
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E L+E +I + S + F +Q++
Sbjct: 71 SLRHP--NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLIS 126
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSP 282
G+S + H DLK EN LL S P +KI DFG + S + + Y +P
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 283 EVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ--PPDYV 337
EVLL +Y + D+WS G + + +G F E R+ I RIL Q PDYV
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 15/214 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY--YQQALVEVSILTTLNKKYDR 168
+I K LG G FG V + +K I + +Q E+ +L +L
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL------ 77
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLS--IVQLFSKQILRG 225
D +I++I+E F ++ I E + L E I RG +LS V KQ++
Sbjct: 78 -DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPE 283
L+ ++H DLKPENIL + + IKIIDFG A D + + Y +PE
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 284 VLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317
V T D+WS G ++ L G F G S
Sbjct: 197 V-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 116 LLGHGTFGQV---AKCWDAEMNSFVAVKIIKNQPAYYQQAL---VEVSILTTLNKKYDRE 169
+LG G+FG+V K ++ A+K++K + + +E IL +N +
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF--- 87
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSI------VQLFSKQIL 223
IV+++ F + L + + L + F LS + V+ + ++
Sbjct: 88 ----IVKLHYAFQTEGKLYLILDFLRGG-------DLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYR 280
L L GII+ DLKPENILL + IK+ DFG + ++ YS+ + Y
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ--PPDYVL 338
+PEV+ +T + D WSFG ++ E+ G F G D M IL A+ P ++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK---DRKETMTMILKAKLGMPQFLS 250
Query: 339 KEAKNTSKFF 348
EA++ +
Sbjct: 251 PEAQSLLRML 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 60
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 117
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 172
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 231
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 232 DFVTEGARD 240
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 29/257 (11%)
Query: 107 TQRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161
++R++ ++D LG G FG V + + +A+K++ ++ L + +
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 58
Query: 162 LNKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
L ++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-- 116
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSY 273
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 117 -YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TL 170
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTF 229
Query: 334 PDYVLKEAKN-TSKFFK 349
PD+V + A++ S+ K
Sbjct: 230 PDFVTEGARDLISRLLK 246
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 24/242 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED--KH-H 173
LG G FG V + + +A+K++ ++ L + + L ++ + + +H +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 174 IVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I+R+Y YF + +L + + L + EL K++ F + + ++ LS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALSYCHS 126
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGY 288
+IH D+KPEN+LL ++ E+KI DFG A + RT + + Y PE++ G
Sbjct: 127 KRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGR 181
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN-TSKF 347
+ +D+WS G + E +G P F + + +R+ R+ PD+V + A++ S+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRL 240
Query: 348 FK 349
K
Sbjct: 241 LK 242
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 58
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 115
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 170
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 229
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 230 DFVTEGARD 238
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 55/242 (22%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 205
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 206 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 265
Query: 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
G +AY IE + +
Sbjct: 266 TD---------------------------------GLNAYLNKYRIELDPQ--------- 283
Query: 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRH 450
LE +V + + L + + + +DFL L+ +D +R + +A H
Sbjct: 284 -------LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 336
Query: 451 PF 452
P+
Sbjct: 337 PY 338
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 60
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 117
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 172
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE + G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 231
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 232 DFVTEGARD 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH--I 174
+G G+ G V + VAVK + + ++ L N+ D HH +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--------FNEVVIMRDYHHDNV 104
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V +Y ++ L + E L+ I + H R ++ + +LR LS L + G+
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIATVCLSVLRALSYLHNQGV 162
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYT 291
IH D+K ++ILL + IK+ DFG + V + + Y+ +PEV+ Y
Sbjct: 163 IHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 292 TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
T +D+WS G +V E+ G P + +RR+
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED--KH-H 173
LG G FG V + + +A+K++ ++ L + + L ++ + + +H +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 174 IVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I+R+Y YF + +L + + L + EL K++ F + + ++ LS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALSYCHS 126
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGY 288
+IH D+KPEN+LL ++ E+KI DFG A + RT + Y PE++ G
Sbjct: 127 KRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--ELCGTLDYLPPEMIEGR 181
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN-TSKF 347
+ +D+WS G + E +G P F + + +R+ R+ PD+V + A++ S+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRL 240
Query: 348 FK 349
K
Sbjct: 241 LK 242
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 60
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 117
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--DLC 172
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 231
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 232 DFVTEGARD 240
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 54
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 55 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 111
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 112 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 166
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 225
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 226 DFVTEGARD 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH 172
V+ LG G V +C A+K++K V+ I+ T R
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKT--------VDKKIVRTEIGVLLRLSHP 108
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHF---RGLSLSIVQLFSKQILRGLSL 228
+I+++ E F + + EL+ L++ I + R + ++ KQIL ++
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV-----KQILEAVAY 163
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYI-QSRYYRSPEVLL 286
L + GI+H DLKPEN+L T A +KI DFG S E + + + + Y +PE+L
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 287 GYQYTTAIDMWSFGCIVAELFLGL-PLFPGASEFDLLRRMI 326
G Y +DMWS G I L G P + + + RR++
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456
++ L D ++ L+ DP KR + FQA +HP+VTG+
Sbjct: 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK 312
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILT-------TLNKKY 166
LG G F V +C A K +K + + L E+++L +N
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGL 226
E+ I+ I EY +C L E++ N +++L KQIL G+
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCL----PELAEMVSEN-------DVIRLI-KQILEGV 144
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS------ACTEDRTVYSYIQSRYYR 280
L I+H DLKP+NILL + +IKI+DFG AC E R + + + Y
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC-ELREI---MGTPEYL 200
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315
+PE+L TTA DMW+ G I L F G
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI+K + + + + TL + ++ H
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVI-----VAKDEVAHTLTENRVLQNSRHPF 209
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
+ Q H +CF + +N EL ++ R S + + +I+ L L +
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 269
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+++ DLK EN++L K IKI DFG + T+ ++ + Y +PEVL Y
Sbjct: 270 VVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 291 TTAIDMWSFGCIVAELFLG-LPLFPGASE--FDLL 322
A+D W G ++ E+ G LP + E F+L+
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W A N + VAVK +K + L E +++ TL ++D+ K H
Sbjct: 196 LGAGQFGEV---WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL--QHDKLVKLHA 250
Query: 175 VRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V V + + I E + +L + +K + L + FS QI G++ ++
Sbjct: 251 V------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
IH DL+ NIL+ S+ KI DFG A ED + +++ + +PE +
Sbjct: 305 YIHRDLRAANILVSASLV---CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ E+ G +PG S +++R + R
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 84
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 56
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 113
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--DLC 168
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 227
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 228 DFVTEGARD 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI+K + A EV+ T N+ + +H +
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIV---AKDEVAHTLTENRVL-QNSRHPFL 213
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
+Y Q H +CF + +N EL ++ R S + + +I+ L L +
Sbjct: 214 TALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 272
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+++ DLK EN++L K IKI DFG + T+ ++ + Y +PEVL Y
Sbjct: 273 VVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 291 TTAIDMWSFGCIVAELFLG-LPLFPGASE--FDLL 322
A+D W G ++ E+ G LP + E F+L+
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 28/241 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALVEVSILTTLNKKYDREDK 171
+G G+FG+V K D VA+KII ++ QQ E+++L+ + Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSSY----- 82
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+ + Y ++ L I E L + +L++ F ++ + K+IL+GL L
Sbjct: 83 --VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLH 137
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLG 287
IH D+K N+LL + ++K+ DFG A T +++ + ++ +PEV+
Sbjct: 138 SEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347
Y + D+WS G EL G P P S+ +R + I PP V K+ +F
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEP--PN-SDMHPMRVLFLIPKNNPPTLVGDFTKSFKEF 251
Query: 348 F 348
Sbjct: 252 I 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 116 LLGHGTFGQV---AKCWDAEMNSFVAVKIIKNQPAYYQQAL---VEVSILTTLNKKYDRE 169
+LG G+FG+V K + A+K++K + + +E IL +N +
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF--- 91
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSI------VQLFSKQIL 223
+V+++ F + L + + L + F LS + V+ + ++
Sbjct: 92 ----VVKLHYAFQTEGKLYLILDFLRGG-------DLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYR 280
GL L GII+ DLKPENILL + IK+ DFG A ++ YS+ + Y
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYM 197
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ--PPDYVL 338
+PEV+ ++ + D WS+G ++ E+ G F G D M IL A+ P ++
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK---DRKETMTLILKAKLGMPQFLS 254
Query: 339 KEAKN 343
EA++
Sbjct: 255 TEAQS 259
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTT 161
T +RY+ LG G F + + D + A K++ +P ++ E++I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSK 220
L D H+V + +F + + E+ +L EL K + ++ + F +
Sbjct: 99 L-------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMR 149
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSR 277
Q ++G+ L + +IH DLK N+ L + ++KI DFG A + + +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
Y +PEVL ++ +D+WS GCI+ L +G P F
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 20/240 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED--KH-H 173
LG G FG V + + +A+K++ ++ L + + L ++ + + +H +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 174 IVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I+R+Y YF + +L + + L + EL K++ F + + ++ LS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALSYCHS 129
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+IH D+KPEN+LL ++ E+KI DFG S + + Y PE++ G +
Sbjct: 130 KRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN-TSKFFK 349
+D+WS G + E +G P F + + +R+ R+ PD+V + A++ S+ K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRLLK 245
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYDREDKH- 172
LG G F V +C A KII + +Q+ E I L KH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL--------KHP 63
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+IVR+++ + + F+L+ L+E I + S + +QIL ++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESVNHCHL 121
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGY 288
GI+H DLKPEN+LL + K A +K+ DFG A + + + + + Y SPEVL
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLF 313
Y +DMW+ G I+ L +G P F
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 29/256 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 55
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 112
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--DLC 167
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 226
Query: 335 DYVLKEAKN-TSKFFK 349
D+V + A++ S+ K
Sbjct: 227 DFVTEGARDLISRLLK 242
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 55
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 112
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--DLC 167
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 226
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 227 DFVTEGARD 235
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 29/256 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 55
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 112
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--XLC 167
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 226
Query: 335 DYVLKEAKN-TSKFFK 349
D+V + A++ S+ K
Sbjct: 227 DFVTEGARDLISRLLK 242
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 58
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 115
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 170
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 229
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 230 DFVTEGARD 238
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 25/255 (9%)
Query: 107 TQRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161
+R++ ++D LG G FG V + +A+K++ ++ L + +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVL------FKAQLEKAGVEHQ 54
Query: 162 LNKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
L ++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-- 112
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQ 275
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 113 -YITELANALSYCHSKKVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRAALCG 168
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
+ Y PE++ G + +D+WS G + E +G P F + D +R+ R+ PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-EFTFPD 227
Query: 336 YVLKEAKN-TSKFFK 349
+V + A++ S+ K
Sbjct: 228 FVTEGARDLISRLLK 242
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 76
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 4 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 57
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 114
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI +FG A + RT +
Sbjct: 115 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIANFGWSVHAPSSRRT--TLC 169
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 228
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 229 DFVTEGARD 237
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTT 161
T +RY+ LG G F + + D + A K++ +P ++ E++I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSK 220
L D H+V + +F + + E+ +L EL K + ++ + F +
Sbjct: 99 L-------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMR 149
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSR 277
Q ++G+ L + +IH DLK N+ L + ++KI DFG A + +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
Y +PEVL ++ +D+WS GCI+ L +G P F
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
+LG G+FG+V + AVKI+K Q + +VE +L K
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----- 402
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL----------FSKQ 221
F+ Q H CF+ +D LY +++ + L I Q+ ++ +
Sbjct: 403 ---------FLTQLH--SCFQTMD-RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE 450
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSR 277
I GL L+ GII+ DLK +N++L + IKI DFG C E+ T + +
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFG-MCKENIWDGVTTKXFCGTP 506
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y ++D W+FG ++ E+ G F G E +L + ++
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 24/242 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED--KH-H 173
LG G FG V + + +A+K++ ++ L + + L ++ + + +H +
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 174 IVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I+R+Y YF + +L + + L + EL K++ F + + ++ LS
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALSYCHS 123
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGY 288
+IH D+KPEN+LL ++ E+KI DFG A + RT + + Y PE++ G
Sbjct: 124 KRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGR 178
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN-TSKF 347
+ +D+WS G + E +G P F + + +R+ R+ PD+V + A++ S+
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRL 237
Query: 348 FK 349
K
Sbjct: 238 LK 239
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 4 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 57
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 114
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS 276
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 115 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRXXLCGT 171
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 230
Query: 337 VLKEAKN 343
V + A++
Sbjct: 231 VTEGARD 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W A N + VAVK +K + L E +++ TL ++D+ K H
Sbjct: 23 LGAGQFGEV---WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL--QHDKLVKLHA 77
Query: 175 VRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V V + + I E + +L + +K + L + FS QI G++ ++
Sbjct: 78 V------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
IH DL+ NIL+ S+ KI DFG A ED + +++ + +PE +
Sbjct: 132 YIHRDLRAANILVSASLV---CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ E+ G +PG S +++R + R
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 70
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 71 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ ++ + Y +PEVL Y
Sbjct: 130 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTT 161
T +RY+ LG G F + + D + A K++ +P ++ E++I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSK 220
L D H+V + +F + + E+ +L EL K + ++ + F +
Sbjct: 99 L-------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMR 149
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSR 277
Q ++G+ L + +IH DLK N+ L + ++KI DFG A + +
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
Y +PEVL ++ +D+WS GCI+ L +G P F
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 185
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
Query: 331 A 331
Sbjct: 246 T 246
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R +VKD+ G G FG D + N VAVK I+ + E+ +N +
Sbjct: 17 DSDRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHR 70
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E L+E +I + S + F +Q++
Sbjct: 71 SLRHP--NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLIS 126
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSP 282
G+S + H DLK EN LL S P +KI FG + S + + Y +P
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 283 EVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ--PPDYV 337
EVLL +Y + D+WS G + + +G F E R+ I RIL Q PDYV
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 24/247 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 56
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 113
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS 276
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S + +
Sbjct: 114 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRDTLCGT 170
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 229
Query: 337 VLKEAKN 343
V + A++
Sbjct: 230 VTEGARD 236
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 67
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 68 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ ++ + Y +PEVL Y
Sbjct: 127 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 74
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 25/255 (9%)
Query: 107 TQRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161
+R++ ++D LG G FG V + + +A+K++ ++ L + +
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 54
Query: 162 LNKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
L ++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-- 112
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQ 275
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 113 -YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRAALCG 168
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPD 227
Query: 336 YVLKEAKN-TSKFFK 349
+V + A++ S+ K
Sbjct: 228 FVTEGARDLISRLLK 242
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 75
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 195
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 67
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 68 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ ++ + Y +PEVL Y
Sbjct: 127 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 186
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 187 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 246
Query: 331 A 331
Sbjct: 247 T 247
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 185
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
Query: 331 A 331
Sbjct: 246 T 246
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 68
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYS 272
++ + ++L+ L GI+H D+KP N+++ ++ ++++ID+G A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNV 184
Query: 273 YIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVA-ELFLGLPLFPGASEFDLLRRMIRILG 330
+ SRY++ PE+L+ Q Y ++DMWS GC+ A +F P F G D L ++ ++LG
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
Query: 331 A 331
Sbjct: 245 T 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
+LG G+FG+V A+KI+K Q + +VE +L L+K
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP----- 80
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL----------FSKQ 221
F+ Q H CF+ +D LY +++ + L I Q+ ++ +
Sbjct: 81 ---------FLTQLH--SCFQTVD-RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR----TVYSYIQSR 277
I GL L GII+ DLK +N++L + IKI DFG C E T + +
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSE---GHIKIADFG-MCKEHMMDGVTTREFCGTP 184
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y ++D W++G ++ E+ G P F G E +L + ++
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI+K + + EV+ T N+ + +H +
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD---EVAHTLTENRVL-QNSRHPFL 72
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
+Y Q H +CF + +N EL ++ R S + + +I+ L L +
Sbjct: 73 TALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 131
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+++ DLK EN++L K IKI DFG + T+ + + Y +PEVL Y
Sbjct: 132 VVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 291 TTAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 120
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 240
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 114
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 55
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 112
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS 276
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRXXLCGT 169
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 228
Query: 337 VLKEAKN-TSKFFK 349
V + A++ S+ K
Sbjct: 229 VTEGARDLISRLLK 242
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 58
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 115
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI +FG A + RT +
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIANFGWSVHAPSSRRT--TLC 170
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 229
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 230 DFVTEGARD 238
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI+K + + EV+ T N+ + +H +
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD---EVAHTLTENRVL-QNSRHPFL 71
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
+Y Q H +CF + +N EL ++ R S + + +I+ L L +
Sbjct: 72 TALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 130
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+++ DLK EN++L K IKI DFG + T+ + + Y +PEVL Y
Sbjct: 131 VVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 291 TTAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 70
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 28/249 (11%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 60
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + EL K++ F +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--- 117
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYI 274
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG A + RT +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRT--TLC 172
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ Y PE++ G + +D+WS G + E +G P F + + +R+ R+ P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFP 231
Query: 335 DYVLKEAKN 343
D+V + A++
Sbjct: 232 DFVTEGARD 240
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 69
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED--KH-H 173
LG G FG V + + +A+K++ ++ L + + L ++ + + +H +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 174 IVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I+R+Y YF + +L + + L + EL K++ F + + ++ LS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT---YITELANALSYCHS 129
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+IH D+KPEN+LL ++ E+KI DFG S + Y PE++ G +
Sbjct: 130 KRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN-TSKFFK 349
+D+WS G + E +G P F + + +R+ R+ PD+V + A++ S+ K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDFVTEGARDLISRLLK 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI+K + + EV+ T N+ + +H +
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD---EVAHTLTENRVL-QNSRHPFL 70
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
+Y Q H +CF + +N EL ++ R S + + +I+ L L +
Sbjct: 71 TALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 129
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+++ DLK EN++L K IKI DFG + T+ + + Y +PEVL Y
Sbjct: 130 VVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 291 TTAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPFY 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 67
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 68 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ + + Y +PEVL Y
Sbjct: 127 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 70
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---YQQALVEVSILTTLNKKYDREDKH- 172
LG G F V +C A KII + +Q+ E I L KH
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL--------KHP 90
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+IVR+++ + + F+L+ L+E I + S + QIL ++ +
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIHQILESVNHIHQ 148
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGY 288
I+H DLKPEN+LL + K A +K+ DFG A E + + + + Y SPEVL
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
Y +D+W+ G I+ L +G P F + L +++
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTT 161
T +RY+ LG G F + + D + A K++ +P ++ E++I +
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSK 220
L D H+V + +F + + E+ +L EL K + ++ + F +
Sbjct: 83 L-------DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMR 133
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSR 277
Q ++G+ L + +IH DLK N+ L + ++KI DFG A + +
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDM---DVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
Y +PEVL ++ +D+WS GCI+ L +G P F
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 67
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 68 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ + + Y +PEVL Y
Sbjct: 127 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 72
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 73 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ + + Y +PEVL Y
Sbjct: 132 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-QALVEVSILTTLNKKYDREDKH 172
+D+LG G +V C + + AVKII+ QP + + + EV +L Y +
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML------YQCQGHR 71
Query: 173 HIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+++ + E+F + + FE + S L + K HF L S+V + + L L
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDVASALDFLH 128
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFG--------SACTEDRT--VYSYIQSRYYR 280
+ GI H DLKPENIL + + +KI DFG C+ T + + S Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 281 SPEVLLGYQ-----YTTAIDMWSFGCIVAELFLGLPLFPG 315
+PEV+ + Y D+WS G I+ L G P F G
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R +VKD+ G G FG D + N VAVK I+ + E+ +N +
Sbjct: 17 DSDRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHR 70
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E L+E +I + S + F +Q++
Sbjct: 71 SLRHP--NIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLIS 126
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS----YIQSRYYR 280
G+S + H DLK EN LL S P +KI FG ++ ++S + + Y
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICAFGY--SKSSVLHSQPKDTVGTPAYI 183
Query: 281 SPEVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ--PPDY 336
+PEVLL +Y + D+WS G + + +G F E R+ I RIL Q PDY
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY 243
Query: 337 V 337
V
Sbjct: 244 V 244
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII--KNQPAYYQQALVEVSILTTLNKKYDR 168
Y + + +G G F V +C A KII K A Q L + + L K +
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN- 64
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
IVR+++ + + F+L+ L+E I + S + +QIL +
Sbjct: 65 -----IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVL 117
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEV 284
G++H DLKPEN+LL + K A +K+ DFG A + + + + + Y SPEV
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
L Y +D+W+ G I+ L +G P F + L +++
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 68
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + YY +PEV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + DMWS G I+ L G P F
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 116/247 (46%), Gaps = 24/247 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 7 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 60
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + EL K++ F +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--- 117
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG + + +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRXXLXGT 174
Query: 278 Y-YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 233
Query: 337 VLKEAKN 343
V + A++
Sbjct: 234 VTEGARD 240
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
+R++ ++D LG G FG V + + +A+K++ ++ L + + L
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQL 58
Query: 163 NKKYDRED--KH-HIVRIYEYF--VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL 217
++ + + +H +I+R+Y YF + +L + + L + EL K++ F +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--- 115
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS 276
+ ++ LS +IH D+KPEN+LL ++ E+KI DFG S +
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRXXLCGT 172
Query: 277 RYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y PE++ G + +D+WS G + E +G P F + + +R+ R+ PD+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-EFTFPDF 231
Query: 337 VLKEAKN-TSKFFK 349
V + A++ S+ K
Sbjct: 232 VTEGARDLISRLLK 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LLG GTFG+V + + A+KI++ + + + T + + +H +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH----TVTESRVLQNTRHPFL 67
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELI-KINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
+Y Q H +CF + +N EL ++ R + + + +I+ L L +
Sbjct: 68 TALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG---SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
++ D+K EN++L K IKI DFG ++ T+ + + Y +PEVL Y
Sbjct: 127 VYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 TAIDMWSFGCIVAELFLG-LPLF 313
A+D W G ++ E+ G LP +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ---PAYYQQALVEVSI 158
+R++ + D LG G FG V + + +A+K++ K+Q Q E+ I
Sbjct: 9 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 159 LTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL-DSNLY-ELIKINHFRGLSLSIVQ 216
+ L +I+R+Y YF ++ + + E LY EL K F +
Sbjct: 69 QSHLRHP-------NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT-- 119
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG----SACTEDRTVYS 272
F +++ L + +IH D+KPEN+L+ E+KI DFG + R +
Sbjct: 120 -FMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLRRRXMCG 175
Query: 273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
+ Y PE++ G + +D+W G + E +G+P F S + RR++ +
Sbjct: 176 TLD---YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 333 PP 334
PP
Sbjct: 233 PP 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH-- 173
+LG G+FG+V E AVK++K + Q VE T K+ ++H
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVEC---TMTEKRILSLARNHPF 85
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
+ +++ F L E ++ + I R + + ++ +I+ L L D G
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRSPEVLLGYQ 289
II+ DLK +N+LL K+ DFG C E T ++ + Y +PE+L
Sbjct: 145 IIYRDLKLDNVLL---DHEGHCKLADFG-MCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 290 YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y A+D W+ G ++ E+ G F +E DL ++
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 27/222 (12%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-QALVEVSILTTLNKKYDRED 170
+ +LLG G + +V + AVKII+ Q + + + EV L Y +
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL------YQCQG 69
Query: 171 KHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+I+ + E+F + FE L S L + K HF S V + + L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRV---VRDVAAALDF 126
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDF--------GSACTEDRT--VYSYIQSRY 278
L GI H DLKPENIL + K + +KI DF ++CT T + + S
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 279 YRSPEVLLGYQ-----YTTAIDMWSFGCIVAELFLGLPLFPG 315
Y +PEV+ + Y D+WS G ++ + G P F G
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ---PAYYQQALVEVSI 158
+R++ + D LG G FG V + + +A+K++ K+Q Q E+ I
Sbjct: 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 159 LTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL-DSNLY-ELIKINHFRGLSLSIVQ 216
+ L +I+R+Y YF ++ + + E LY EL K F +
Sbjct: 68 QSHLRHP-------NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT-- 118
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG----SACTEDRTVYS 272
F +++ L + +IH D+KPEN+L+ E+KI DFG + R +
Sbjct: 119 -FMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLRRRXMCG 174
Query: 273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
+ Y PE++ G + +D+W G + E +G+P F S + RR++ +
Sbjct: 175 TLD---YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 333 PP 334
PP
Sbjct: 232 PP 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
+LG G+FG+V + AVKI+K Q + +VE +L K
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----- 81
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL----------FSKQ 221
F+ Q H CF+ +D LY +++ + L I Q+ ++ +
Sbjct: 82 ---------FLTQLH--SCFQTMD-RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE 129
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSR 277
I GL L+ GII+ DLK +N++L + IKI DFG C E+ T + +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFG-MCKENIWDGVTTKXFCGTP 185
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y ++D W+FG ++ E+ G F G E +L + ++
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-QALVEVSILTTLNKKYDREDKH 172
+D+LG G +V C + + AVKII+ QP + + + EV +L Y +
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML------YQCQGHR 71
Query: 173 HIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+++ + E+F + + FE + S L + K HF L S+V + + L L
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDVASALDFLH 128
Query: 231 DAGIIHCDLKPENILLC---TSVKPAEIKIIDFGSA------CTEDRT--VYSYIQSRYY 279
+ GI H DLKPENI LC V P +I D GS C+ T + + S Y
Sbjct: 129 NKGIAHRDLKPENI-LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 280 RSPEVLLGYQ-----YTTAIDMWSFGCIVAELFLGLPLFPG 315
+PEV+ + Y D+WS G I+ L G P F G
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 108 QRRYIVKDL-----LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ---PAYYQQALVEVSI 158
+R++ + D LG G FG V + + +A+K++ K+Q Q E+ I
Sbjct: 8 KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 159 LTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL-DSNLY-ELIKINHFRGLSLSIVQ 216
+ L +I+R+Y YF ++ + + E LY EL K F +
Sbjct: 68 QSHLRHP-------NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT-- 118
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG----SACTEDRTVYS 272
F +++ L + +IH D+KPEN+L+ E+KI DFG + R +
Sbjct: 119 -FMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLRRRXMCG 174
Query: 273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332
+ Y PE++ G + +D+W G + E +G+P F S + RR++ +
Sbjct: 175 TLD---YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 333 PP 334
PP
Sbjct: 232 PP 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL---- 69
Query: 164 KKYDREDKHH-IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ HH ++ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKN-------QPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG+V + A+K++K Q + + +SI+T
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--------- 64
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
I+R++ F + + + + ++ L+ L++ + + + + ++ ++ L
Sbjct: 65 -HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEY 121
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY 288
L II+ DLKPENILL K IKI DFG A Y + Y +PEV+
Sbjct: 122 LHSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTK 178
Query: 289 QYTTAIDMWSFGCIVAELFLG 309
Y +ID WSFG ++ E+ G
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG 199
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALV-EVSILTTLNK 164
Y + +++G G F V +C + E AVKI+ + P + L E SI L
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 85
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFELLDSN--LYELIK-INHFRGLSLSIVQLFSK 220
KH HIV + E + L + FE +D +E++K + S ++ + +
Sbjct: 86 ------KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT---VYSYIQSR 277
QIL L D IIH D+KP +LL + A +K+ FG A + + +
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
++ +PEV+ Y +D+W G I+ L G F G E
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W A N + VAVK +K + L E +++ TL ++D+ K H
Sbjct: 190 LGAGQFGEV---WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL--QHDKLVKLHA 244
Query: 175 VRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V V + + I E + +L + +K + L + FS QI G++ ++
Sbjct: 245 V------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTA 293
IH DL+ NIL+ S+ KI DFG A + + +PE + +T
Sbjct: 299 YIHRDLRAANILVSASLV---CKIADFGLARVGAKFPIKWT------APEAINFGSFTIK 349
Query: 294 IDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
D+WSFG ++ E+ G +PG S +++R + R
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 117 LGHGTFGQV-AKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG+G FG+V W+ N+ VA+K +K + L E I+ L K+D+ +V
Sbjct: 17 LGNGQFGEVWMGTWNG--NTKVAIKTLKPGTMSPESFLEEAQIMKKL--KHDK-----LV 67
Query: 176 RIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y V + + I E ++ +L + +K R L L + + Q+ G++ ++
Sbjct: 68 QLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL+ NIL+ + KI DFG A ED + +++ + +PE L ++
Sbjct: 127 IHRDLRSANILVGNGLI---CKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 291 TTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
T D+WSFG ++ EL G +PG + ++L ++ R
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
++ R VKD+ G G FG D VAVK I+ A + E+ +N +
Sbjct: 18 DSDRYDFVKDI-GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-----INHR 71
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR 224
R +IVR E + HL I E LYE +I + S + F +Q+L
Sbjct: 72 SLRHP--NIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLS 127
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY----YR 280
G+S I H DLK EN LL S P +KI DFG ++ ++S +S Y
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAP-RLKICDFGY--SKSSVLHSQPKSTVGTPAYI 184
Query: 281 SPEVLLGYQYTTAI-DMWSFGCIVAELFLGLPLFPGASEFDLLRRMI-RILGAQ 332
+PEVLL +Y I D+WS G + + +G F E R+ I RIL +
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 211
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 270 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEP 345
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL---- 69
Query: 164 KKYDREDKHH-IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ HH ++ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKY 166
YI+++ LG G+FG+V + VA+K I Q + + E+S L L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL---- 66
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
+H HI+++Y+ + + E L++ I + ++ + F +QI+
Sbjct: 67 ----RHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQIICA 120
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPE 283
+ I+H DLKPEN+LL ++ +KI DFG + T+ + + S Y +PE
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 284 VLLGYQYTT-AIDMWSFGCIVAELFLGLPLFPGASEF 319
V+ G Y +D+WS G ++ + +G P EF
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVG--RLPFDDEF 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALVEVSILTTLNKKYDREDK 171
+G G+FG+V K D VA+KII ++ QQ E+++L+ + Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPY----- 81
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ + Y ++ L I E L + + L + + ++IL+GL L
Sbjct: 82 --VTKYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS---YIQSRYYRSPEVLLGY 288
IH D+K N+LL E+K+ DFG A T ++ + ++ +PEV+
Sbjct: 138 EKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 289 QYTTAIDMWSFGCIVAELFLGLP 311
Y + D+WS G EL G P
Sbjct: 195 AYDSKADIWSLGITAIELARGEP 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALV-EVSILTTLNK 164
Y + +++G G F V +C + E AVKI+ + P + L E SI L
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-- 83
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFELLDSN--LYELIK-INHFRGLSLSIVQLFSK 220
KH HIV + E + L + FE +D +E++K + S ++ + +
Sbjct: 84 ------KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT---VYSYIQSR 277
QIL L D IIH D+KP +LL + A +K+ FG A + + +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318
++ +PEV+ Y +D+W G I+ L G F G E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL---- 69
Query: 164 KKYDREDKHH-IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ HH ++ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDKHHI 174
+LG GT+G V D +A+K I + + Y Q L E+++ L K +I
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK-------NI 81
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL--SLSIVQLFSKQILRGLSLLKDA 232
V+ F + I E + + + + L + + ++KQIL GL L D
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSA--------CTEDRTVYSYIQSRYYRSPEV 284
I+H D+K +N+L+ T +KI DFG++ CTE ++ + Y +PE+
Sbjct: 142 QIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTE-----TFTGTLQYMAPEI 194
Query: 285 LLG--YQYTTAIDMWSFGCIVAELFLGLPLF 313
+ Y A D+WS GC + E+ G P F
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL---- 69
Query: 164 KKYDREDKHH-IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ HH ++ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL---- 69
Query: 164 KKYDREDKHH-IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ HH ++ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 124 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 179
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A ++ + Y +PE++L Y
Sbjct: 180 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV--EVSILTTLNKKYDREDKH 172
D +G G+FG+V K D VA+KII + A + + E+++L+ + Y
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY------ 78
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
I R + ++ L I E L + +L+K L + + ++IL+GL L
Sbjct: 79 -ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHS 134
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS---YIQSRYYRSPEVLLGY 288
IH D+K N+LL + ++K+ DFG A T ++ + ++ +PEV+
Sbjct: 135 ERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 289 QYTTAIDMWSFGCIVAELFLGLP 311
Y D+WS G EL G P
Sbjct: 192 AYDFKADIWSLGITAIELAKGEP 214
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 69
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 127
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 22/238 (9%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ----QALVEVSILTTL 162
T R+Y V LG G FG+V C A K ++ + + AL E IL +
Sbjct: 185 TFRQYRV---LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF--RGLSLSIVQLFSK 220
N ++ +V + + + LC+ L++ + I H G + ++
Sbjct: 242 NSRF-------VVSLAYAYETKDALCLVLTLMNGGDLKF-HIYHMGQAGFPEARAVFYAA 293
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRY 278
+I GL L I++ DLKPENILL I+I D G A E +T+ + +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y +PEV+ +YT + D W+ GC++ E+ G F + + R++ P +Y
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY 408
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 93
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILR 224
RI + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+L+ + IK+ DFG A + + Y +PE+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 69
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 127
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 124 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 179
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 180 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q L E+ TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKEIE--HTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILRG 225
I + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A ++ + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDKHHI 174
+LG GT+G V D +A+K I + + Y Q L E+++ L K +I
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK-------NI 67
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL--SLSIVQLFSKQILRGLSLLKDA 232
V+ F + I E + + + + L + + ++KQIL GL L D
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSA--------CTEDRTVYSYIQSRYYRSPEV 284
I+H D+K +N+L+ T +KI DFG++ CTE ++ + Y +PE+
Sbjct: 128 QIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTE-----TFTGTLQYMAPEI 180
Query: 285 LLG--YQYTTAIDMWSFGCIVAELFLGLPLF 313
+ Y A D+WS GC + E+ G P F
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILRG 225
I + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYD 167
Y ++ +G G F +V VAVKII P Q+ EV I+ LN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP-- 74
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 -----NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQ 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVL 285
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMN---IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF 185
Query: 286 LGYQYTT-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
G +Y +D+WS G I+ L G F G + +L R++R
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
+G G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + IK+ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-----KNQPAYYQQALVEVSILTTLNKKYDREDK 171
+G G+FG+V K D VA+KII +++ QQ E+++L+ + Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPY----- 66
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ + Y ++ L I E L + + L + + ++IL+GL L
Sbjct: 67 --VTKYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLGY 288
IH D+K N+LL E+K+ DFG A T +++ + ++ +PEV+
Sbjct: 123 EKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 289 QYTTAIDMWSFGCIVAELFLGLP 311
Y + D+WS G EL G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEP 202
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
+G G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + IK+ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 93
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILR 224
RI + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALVEVSILTTLNKKYDREDK 171
+G G+FG+V K D VA+KII ++ QQ E+++L+ + Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPY----- 86
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+ + Y ++ L I E L + +L++ ++ + ++IL+GL L
Sbjct: 87 --VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL---REILKGLDYLH 141
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYIQSRYYRSPEVLLG 287
IH D+K N+LL + E+K+ DFG A T +++ + ++ +PEV+
Sbjct: 142 SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 288 YQYTTAIDMWSFGCIVAELFLGLP 311
Y + D+WS G EL G P
Sbjct: 199 SAYDSKADIWSLGITAIELARGEP 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC A K IK + + V EV+IL
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL---- 83
Query: 164 KKYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
RE +H +I+ +++ F + + + EL+ L++ + L+ F KQ
Sbjct: 84 ----REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQ 137
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFG-----SACTEDRTVYSYIQ 275
IL G+ L I H DLKPENI+L P IK+IDFG A E + ++ +
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 197
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 198 ---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K +++ P +A EV + +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCP----KARREVEL------HWRASQC 114
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEV 284
L I H D+KPEN+L + A +K+ DFG A T ++ + + YY +PEV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L +Y + D WS G I L G P F
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLN 163
Y + + LG G F V KC A K IK + ++ EV+IL
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL---- 62
Query: 164 KKYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
RE +H +I+ +++ F + + + EL+ L++ + L+ F KQ
Sbjct: 63 ----REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQ 116
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFG-----SACTEDRTVYSYIQ 275
IL G+ L I H DLKPENI+L P IK+IDFG A E + ++ +
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 176
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 177 ---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
++G G+FG+V F AVK+++ + +IL +K+ +++ ++
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKK-----------AILKKKEEKHIMSERNVLL 93
Query: 176 RIYEY-FVCQRHLCICFELLDSNLYELIKIN------HF---RGLSLSIVQLFSKQILRG 225
+ ++ F+ H F+ D + L IN H R + ++ +I
Sbjct: 94 KNVKHPFLVGLHFS--FQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA 151
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRS 281
L L I++ DLKPENILL + I + DFG C E+ T ++ + Y +
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFG-LCKENIEHNSTTSTFCGTPEYLA 207
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
PEVL Y +D W G ++ E+ GLP F
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
+G G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + IK+ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSI 158
+ + Y + + LG G F V KC A K IK + ++ EV+I
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 159 LTTLNKKYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQ 216
L RE +H +I+ +++ F + + + EL+ L++ + L+
Sbjct: 69 L--------REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEAT 118
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFG-----SACTEDRTV 270
F KQIL G+ L I H DLKPENI+L P IK+IDFG A E + +
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 178
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ + + +PE++ DMWS G I L G F G ++ + L
Sbjct: 179 FGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 134
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 193 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 250 EVDIWSLGIMVIEMVDGEP 268
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 22/238 (9%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ----QALVEVSILTTL 162
T R+Y V LG G FG+V C A K ++ + + AL E IL +
Sbjct: 185 TFRQYRV---LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF--RGLSLSIVQLFSK 220
N ++ +V + + + LC+ L++ + I H G + ++
Sbjct: 242 NSRF-------VVSLAYAYETKDALCLVLTLMNGGDLKF-HIYHMGQAGFPEARAVFYAA 293
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQSRY 278
+I GL L I++ DLKPENILL I+I D G A E +T+ + +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336
Y +PEV+ +YT + D W+ GC++ E+ G F + + R++ P +Y
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY 408
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-----KNQPAYYQQALVEVSILTTLNKKYDREDK 171
+G G+FG+V K D VA+KII +++ QQ E+++L+ + Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPY----- 66
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ + Y ++ L I E L + + L + + ++IL+GL L
Sbjct: 67 --VTKYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS---YIQSRYYRSPEVLLGY 288
IH D+K N+LL E+K+ DFG A T ++ + ++ +PEV+
Sbjct: 123 EKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 289 QYTTAIDMWSFGCIVAELFLGLP 311
Y + D+WS G EL G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEP 202
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 93
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILR 224
RI + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 101
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 102 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPEVL 285
+IH DLK N+ L + E+KI DFG A E + V + Y +PEVL
Sbjct: 159 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKVLCGTPN--YIAPEVL 213
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDK 171
+LG G FG+V C A K + + YQ A+VE IL ++ ++
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF----- 246
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFR-GLSLSIVQLFSKQILRGLSL 228
IV + F + LC+ +++ Y + ++ G ++ QI+ GL
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYRSPEVL 285
L II+ DLKPEN+LL ++I D G A Y + + +PE+L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 286 LGYQYTTAIDMWSFGCIVAEL 306
LG +Y ++D ++ G + E+
Sbjct: 362 LGEEYDFSVDYFALGVTLYEM 382
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 88
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 89 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 144
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A ++ + Y +PE++L Y
Sbjct: 145 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 93
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILR 224
RI + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDK 171
+LG G FG+V C A K + + YQ A+VE IL ++ ++
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF----- 246
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFR-GLSLSIVQLFSKQILRGLSL 228
IV + F + LC+ +++ Y + ++ G ++ QI+ GL
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYRSPEVL 285
L II+ DLKPEN+LL ++I D G A Y + + +PE+L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 286 LGYQYTTAIDMWSFGCIVAEL 306
LG +Y ++D ++ G + E+
Sbjct: 362 LGEEYDFSVDYFALGVTLYEM 382
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 94
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q L E+ TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKEIE--HTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILRG 225
I + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+++ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMID---QQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 81
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 82 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLH 138
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLG 287
+IH DLK N+ L + E+KI DFG A + + + Y +PEVL
Sbjct: 139 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDK 171
+LG G FG+V C A K + + YQ A+VE IL ++ ++
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF----- 246
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFR-GLSLSIVQLFSKQILRGLSL 228
IV + F + LC+ +++ Y + ++ G ++ QI+ GL
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYRSPEVL 285
L II+ DLKPEN+LL ++I D G A Y + + +PE+L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 286 LGYQYTTAIDMWSFGCIVAEL 306
LG +Y ++D ++ G + E+
Sbjct: 362 LGEEYDFSVDYFALGVTLYEM 382
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 95
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 96 -LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 151
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 152 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 21/282 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV--LKEAKNTSKFF 348
A+D W+ G ++ E+ G P F + +++ P + LK+
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 349 KCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390
+ N++NG I + I R+++ P I K
Sbjct: 276 DLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 106 ETQRRYIVKDLLGHGTFGQ---VAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL 162
++ +Y+ +G G+FG+ V D + I + +++ EV++L +
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 163 NKKYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFS- 219
KH +IV+ E F L I + + +L++ +IN +G+ Q+
Sbjct: 81 --------KHPNIVQYRESFEENGSLYIVMDYCEGGDLFK--RINAQKGVLFQEDQILDW 130
Query: 220 -KQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQ 275
QI L + D I+H D+K +NI L K +++ DFG A + TV + I
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIG 187
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334
+ YY SPE+ Y D+W+ GC++ EL F S +L+ ++I G+ PP
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 92
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGL---SLSIVQLFSKQILR 224
RI + + + F D SNLY +++ +H R + S + ++ QI+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+++ + I++ DFG A + + Y +PE+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLNKKYDRE 169
LG G F V KC + A K IK + + V EVSIL +E
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL--------KE 70
Query: 170 DKH-HIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H +++ ++E + + + + EL+ L++ + L+ F KQIL G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVY 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTED--RTVYSYIQSRYYRSPEV 284
L I H DLKPENI+L P IKIIDFG A D + + + +PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ DMWS G I L G F G ++ + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 114
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 174
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 175 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 231
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 30/233 (12%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAV-----KIIKNQPAYYQQALVEVSILTTLNK 164
+Y++ DLLG G++G+V + D+E AV K ++ P E+ +L L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 165 K--------YDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQ 216
K E+K + + EY VC E+LDS + + G
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQ-----EMLDSVPEKRFPVCQAHG------- 113
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCT--SVKPAEIKIIDFGSACTEDRTVYSYI 274
+ Q++ GL L GI+H D+KP N+LL T ++K + + + + D T +
Sbjct: 114 -YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 275 QSRYYRSPEVLLGYQYTTA--IDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
S ++ PE+ G + +D+WS G + + GL F G + + L +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 426 LVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPV 473
L D LKG++E++PAKR+S Q +H + + PP E P VP+
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK------HPPAEAP-VPI 280
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 31/209 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVS-ILTTLNKKYDREDKHHIV 175
LG G+FG+V E + A+KI+ +Q +V++ I TLN+K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD------KQKVVKLKQIEHTLNEK---------- 93
Query: 176 RIYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILR 224
RI + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEV 284
L +I+ DLKPEN+++ + IK+ DFG A + + Y +PE+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLF 313
+L Y A+D W+ G ++ E+ G P F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 99
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 100 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLH 156
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPEVL 285
+IH DLK N+ L + E+KI DFG A E + V + Y +PEVL
Sbjct: 157 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKVLCGTPN--YIAPEVL 211
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-------EVSILTTLN 163
Y + + LG G F V KC + A K IK + + + V EVSIL
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL---- 69
Query: 164 KKYDREDKH-HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQ 221
R+ H +I+ +++ + + + + EL+ L++ + LS F KQ
Sbjct: 70 ----RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQ 123
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC-TEDRTVYSYI-QSRY 278
IL G++ L I H DLKPENI+L P IK+IDFG A ED + I +
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+ +PE++ DMWS G I L G F G ++ + L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 104 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 159
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 86
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 147 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 203
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDK 171
+LG G FG+V C A K + + YQ A+VE IL ++ ++
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF----- 246
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFR-GLSLSIVQLFSKQILRGLSL 228
IV + F + LC+ +++ Y + ++ G ++ QI+ GL
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYRSPEVL 285
L II+ DLKPEN+LL ++I D G A Y + + +PE+L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 286 LGYQYTTAIDMWSFGCIVAEL 306
LG +Y ++D ++ G + E+
Sbjct: 362 LGEEYDFSVDYFALGVTLYEM 382
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+GHG+FG V D + VA+K + K +Q + EV L L + +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 173 HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232
+R + ++ + C+ S+L E+ H + L + + L+GL+ L
Sbjct: 122 CYLREHTAWLVMEY-CLGSA---SDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY---Q 289
+IH D+K NILL +P +K+ DFGSA ++ + Y+ +PEV+L Q
Sbjct: 174 NMIHRDVKAGNILLS---EPGLVKLGDFGSASIM-APANXFVGTPYWMAPEVILAMDEGQ 229
Query: 290 YTTAIDMWSFGCIVAEL 306
Y +D+WS G EL
Sbjct: 230 YDGKVDVWSLGITCIEL 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 77
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 78 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLH 134
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLG 287
+IH DLK N+ L + E+KI DFG A + + + Y +PEVL
Sbjct: 135 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKH-HI 174
+G G+ G V + VAVK++ + ++ L EV I+ R+ +H ++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM--------RDYQHFNV 104
Query: 175 VRIYEYFVCQRHLCICFELLD----SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
V +Y+ ++ L + E L +++ +++N + + + +L+ L+ L
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ------IATVCEAVLQALAYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLG 287
G+IH D+K ++ILL +K+ DFG + V + + Y+ +PEV+
Sbjct: 159 AQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
Y T +D+WS G +V E+ G P + S ++R+
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 34/222 (15%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRED 170
+K+ LG G FG V + + VA+K + + P ++ +E+ I+ LN
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN------- 71
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDSNLYELIK------------INHFR---GLSLSIV 215
+ V R + + L N L+ +N F GL +
Sbjct: 72 -------HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 216 QLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSY 273
+ I L L + IIH DLKPENI+L + KIID G A D+ +
Sbjct: 125 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL-PLFP 314
+ + Y +PE+L +YT +D WSFG + E G P P
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 34/222 (15%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRED 170
+K+ LG G FG V + + VA+K + + P ++ +E+ I+ LN
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN------- 70
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDSNLYELIK------------INHFR---GLSLSIV 215
+ V R + + L N L+ +N F GL +
Sbjct: 71 -------HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 216 QLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSY 273
+ I L L + IIH DLKPENI+L + KIID G A D+ +
Sbjct: 124 RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL-PLFP 314
+ + Y +PE+L +YT +D WSFG + E G P P
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 77
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 78 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLH 134
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLG 287
+IH DLK N+ L + E+KI DFG A + + + Y +PEVL
Sbjct: 135 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 288 YQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY--QQALVEVSILTTLNKKYDR 168
Y + LG G+FG+V + VA+KII + Q +E I Y R
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI------SYLR 68
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H HI+++Y+ + + + E + L++ I +S + F +QI+ +
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVE 126
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVL 285
I+H DLKPEN+LL + +KI DFG + T+ + + S Y +PEV+
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 286 LGYQYTT-AIDMWSFGCIV 303
G Y +D+WS G I+
Sbjct: 184 SGKLYAGPEVDVWSCGVIL 202
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 29 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 78
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 79 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 136 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 192
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 241
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY--QQALVEVSILTTLNKKYDR 168
Y + LG G+FG+V + VA+KII + Q +E I Y R
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI------SYLR 69
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H HI+++Y+ + + + E + L++ I +S + F +QI+ +
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVE 127
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVL 285
I+H DLKPEN+LL + +KI DFG + T+ + + S Y +PEV+
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 286 LGYQYTT-AIDMWSFGCIV 303
G Y +D+WS G I+
Sbjct: 185 SGKLYAGPEVDVWSCGVIL 203
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSI---LTTLNK 164
Y+VK+ +G G++ + +C N AVK+I K P+ + L+ + TL
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 165 KYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
YD D H+ + E L ELLD ++++ F S V I +
Sbjct: 89 VYD--DGKHVYLVTE-------LMRGGELLD----KILRQKFFSEREASFVL---HTIGK 132
Query: 225 GLSLLKDAGIIHCDLKPENILLC-TSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYR 280
+ L G++H DLKP NIL S P ++I DFG A E+ + + + +
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF---PGASEFDLLRRM 325
+PEVL Y D+WS G ++ + G F P + ++L R+
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSI---LTTLNK 164
Y+VK+ +G G++ + +C N AVK+I K P+ + L+ + TL
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 165 KYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
YD D H+ + E L ELLD ++++ F S V I +
Sbjct: 89 VYD--DGKHVYLVTE-------LMRGGELLD----KILRQKFFSEREASFVL---HTIGK 132
Query: 225 GLSLLKDAGIIHCDLKPENILLC-TSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYR 280
+ L G++H DLKP NIL S P ++I DFG A E+ + + + +
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF---PGASEFDLLRRM 325
+PEVL Y D+WS G ++ + G F P + ++L R+
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 31 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 80
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 81 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 138 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 194
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH 172
V + LG G++G V K E VA+K + + + Q+ + E+SI+ D
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-SDLQEIIKEISIMQQC-------DSP 84
Query: 173 HIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
H+V+ Y + L I E + ++ ++I++ + + L+ + + L+GL L
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS---YIQSRYYRSPEVLLGY 288
IH D+K NILL T K+ DFG A + I + ++ +PEV+
Sbjct: 144 MRKIHRDIKAGNILLNTE---GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 289 QYTTAIDMWSFGCIVAELFLGLP 311
Y D+WS G E+ G P
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKP 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 27 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 76
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 77 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 134 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 190
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY--QQALVEVSILTTLNKKYDR 168
Y + LG G+FG+V + VA+KII + Q +E I Y R
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI------SYLR 63
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H HI+++Y+ + + + E + L++ I +S + F +QI+ +
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVE 121
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVL 285
I+H DLKPEN+LL + +KI DFG + T+ + + S Y +PEV+
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 286 LGYQYTT-AIDMWSFGCIV 303
G Y +D+WS G I+
Sbjct: 179 SGKLYAGPEVDVWSCGVIL 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY--QQALVEVSILTTLNKKYDR 168
Y + LG G+FG+V + VA+KII + Q +E I Y R
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI------SYLR 59
Query: 169 EDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
+H HI+++Y+ + + + E + L++ I +S + F +QI+ +
Sbjct: 60 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVE 117
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVL 285
I+H DLKPEN+LL + +KI DFG + T+ + + S Y +PEV+
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 286 LGYQYTT-AIDMWSFGCIV 303
G Y +D+WS G I+
Sbjct: 175 SGKLYAGPEVDVWSCGVIL 193
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 33/236 (13%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D ++ VAVK+++ P++Y + E LN
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y+ + I E +D L I H G ++
Sbjct: 73 A-------IVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---------CTEDRTVY 271
+ L+ GIIH D+KP NI++ + +K++DFG A T+ V
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Q Y SPE G D++S GC++ E+ G P F G S + + +R
Sbjct: 181 GTAQ---YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K Q L E +++ TL + DK +
Sbjct: 21 LGAGQFGEV---WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-----QHDK--L 70
Query: 175 VRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
VR+Y + + I E + +L + +K + + L + FS QI G++ ++
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
IH DL+ N+L+ S+ KI DFG A ED + +++ + +PE +
Sbjct: 131 YIHRDLRAANVLVSESLM---CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 290 YTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
+T D+WSFG ++ E+ G +PG + D++
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 91
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 92 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 150 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 207 EVDIWSLGIMVIEMVDGEP 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 93
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V E + A+KI+ Q + I TLN+K R
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK-----QIEHTLNEK----------R 88
Query: 177 IYEYFVCQRHLCICFELLD-SNLYELIK-------INHFRGLSLSI---VQLFSKQILRG 225
I + + + F D SNLY +++ +H R + + ++ QI+
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 148
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL 285
L +I+ DLKPEN+L+ + I++ DFG A + + Y +PE++
Sbjct: 149 FEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 205
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
L Y A+D W+ G ++ E+ G P F
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 89
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 90 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 145
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 146 SLDLIYRDLKPENLLID---EQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPF 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
RY + D LG G V D +N VA+K I P ++ L K+++R
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL----------KRFER 60
Query: 169 E-------DKHHIVRIYEYFVCQRHLC--ICFELLDS-NLYELIKINHFRGLSLSIVQLF 218
E +IV + + V + C + E ++ L E I+ LS+ F
Sbjct: 61 EVHNSSQLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINF 116
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-------SACTEDRTVY 271
+ QIL G+ D I+H D+KP+NIL+ ++ +KI DFG ++ T+ V
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSN---KTLKIFDFGIAKALSETSLTQTNHVL 173
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+Q Y SPE G D++S G ++ E+ +G P F G + + + I+
Sbjct: 174 GTVQ---YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ 226
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 30 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 79
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 80 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 137 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 193
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 242
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ ++ G P F
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 113 VKDLLGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
V++++G G FG V K W A+ VA+K I+++ + + +VE+ L+ +N
Sbjct: 13 VEEVVGRGAFGVVCKAKWRAK---DVAIKQIESE-SERKAFIVELRQLSRVNHP------ 62
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIK----INHFRGLSLSIVQLFSKQILRGL 226
+IV++Y C +C+ E + +LY ++ + ++ L Q + L
Sbjct: 63 -NIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLL 286
++ +IH DLKP N+LL +KI DFG+AC + + S + +PEV
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 177
Query: 287 GYQYTTAIDMWSFGCIVAELF 307
G Y+ D++S+G I+ E+
Sbjct: 178 GSNYSEKCDVFSWGIILWEVI 198
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 21 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 70
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 71 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 128 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VA+KII K Q P Q+ EV I+ LN +
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP-------N 72
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQIVSAVQYCHQKR 131
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+ G +Y
Sbjct: 132 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA-QPPDYVLKEAKNTSKFFK 349
+D+WS G I+ L G F G + +L R++R G + P Y+ + +N K F
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKYRIPFYMSTDCENLLKRFL 246
Query: 350 CIGSV 354
+ +
Sbjct: 247 VLNPI 251
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+++ + I++ DFG A + + Y +PE+++ Y
Sbjct: 159 SLDLIYRDLKPENLIID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K Q L E +++ TL + DK +
Sbjct: 20 LGAGQFGEV---WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-----QHDK--L 69
Query: 175 VRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
VR+Y + + I E + +L + +K + + L + FS QI G++ ++
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
IH DL+ N+L+ S+ KI DFG A ED + +++ + +PE +
Sbjct: 130 YIHRDLRAANVLVSESLM---CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 290 YTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
+T ++WSFG ++ E+ G +PG + D++
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 27/233 (11%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D + VAVK+++ P++Y + E LN
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y+ + I E +D L I H G ++
Sbjct: 73 A-------IVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTED-----RTVYSYI 274
+ L+ GIIH D+KP NIL+ + +K++DFG A D + I
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+ Y SPE G D++S GC++ E+ G P F G S + + +R
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 89
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 90 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 148 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 205 EVDIWSLGIMVIEMVDGEP 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 84
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 143 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 200 EVDIWSLGIMVIEMVDGEP 218
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDK 171
LG G F + + DA+ A KI+ +P ++ +E+SI +L +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------ 75
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
H+V + +F + + EL +L EL K + L+ + + +QI+ G L
Sbjct: 76 -HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH 132
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPEVL 285
+IH DLK N+ L + E+KI DFG A E + V + Y +PEVL
Sbjct: 133 RNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKVLCGTPN--YIAPEVL 187
Query: 286 LGYQYTTAIDMWSFGCIVAELFLGLPLF 313
++ +D+WS GCI+ L +G P F
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-QALVEVSILTTLNK 164
E ++Y KD++G G V +C AVKI++ + L EV T
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 165 KYDRE--DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQ 221
R+ HI+ + + + + + F+L+ EL + LS + +
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKG--ELFDYLTEKVALSEKETRSIMRS 208
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSRYY 279
+L +S L I+H DLKPENILL ++ +I++ DFG +C + + + Y
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNM---QIRLSDFGFSCHLEPGEKLRELCGTPGY 265
Query: 280 RSPEVLLGYQ------YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
+PE+L Y +D+W+ G I+ L G P F + +LR ++
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSI---LTTLNK 164
Y VK+ +G G++ +C N AVKII K P + L+ + TL
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
YD Y Y V + L ELLD ++++ F S V LF+ I +
Sbjct: 84 VYDDGK-------YVYVVTE--LMKGGELLD----KILRQKFFSEREASAV-LFT--ITK 127
Query: 225 GLSLLKDAGIIHCDLKPENILLCT-SVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYR 280
+ L G++H DLKP NIL S P I+I DFG A E+ + + + +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLG 309
+PEVL Y A D+WS G ++ + G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G GT GQV K + +AVK ++ + IL L+ D +IV+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK----RILMDLDVVLKSHDCPYIVQ 88
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIKINHFRG-LSLSIVQLFSKQILRGLSLLKDA-GI 234
+ F+ + I EL+ + +L K +G + I+ + I++ L LK+ G+
Sbjct: 89 CFGTFITNTDVFIAMELMGTCAEKLKK--RMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQSRYYRSPEVL-----LG 287
IH D+KP NILL + +IK+ DFG + +D+ Y +PE +
Sbjct: 147 IHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 288 YQYTTAIDMWSFGCIVAELFLG-LPLFPGASEFDLLRRMIRILGAQPP 334
Y D+WS G + EL G P ++F++L ++L +PP
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL---TKVLQEEPP 248
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 33/236 (13%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D ++ VAVK+++ P++Y + E LN
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y + I E +D L I H G ++
Sbjct: 73 A-------IVAVYATGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---------CTEDRTVY 271
+ L+ GIIH D+KP NI++ + +K++DFG A T+ V
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Q Y SPE G D++S GC++ E+ G P F G S + + +R
Sbjct: 181 GTAQ---YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 109/261 (41%), Gaps = 49/261 (18%)
Query: 117 LGHGTFGQVAKCWDA------EMNSFVAVKIIKNQPAY--YQQALVEVSILTTLNKKYDR 168
LG G FGQV + DA VAVK++K + ++ + E+ IL +
Sbjct: 35 LGRGAFGQVIEA-DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG----- 88
Query: 169 EDKHHIVRIYEYFVCQRH---LCICFELLD-SNL--YELIKINHF--------RGLSLSI 214
HH+ + C + L + E NL Y K N F L+L
Sbjct: 89 ---HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY--- 271
+ +S Q+ +G+ L IH DL NILL + +KI DFG A R +Y
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLA----RDIYKDP 198
Query: 272 SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLLR 323
Y++ R +PE + YT D+WSFG ++ E+F LG +PG + + R
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258
Query: 324 RMIRILGAQPPDYVLKEAKNT 344
R+ + PDY E T
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQT 279
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII----KNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+GHG+FG V D + VA+K + K +Q + EV L L + +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 173 HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232
+R + ++ + C+ S+L E+ H + L + + L+GL+ L
Sbjct: 83 CYLREHTAWLVMEY-CLGSA---SDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY---Q 289
+IH D+K NILL +P +K+ DFGSA ++ + Y+ +PEV+L Q
Sbjct: 135 NMIHRDVKAGNILLS---EPGLVKLGDFGSASIM-APANXFVGTPYWMAPEVILAMDEGQ 190
Query: 290 YTTAIDMWSFGCIVAEL 306
Y +D+WS G EL
Sbjct: 191 YDGKVDVWSLGITCIEL 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 113 VKDLLGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
V++++G G FG V K W A+ VA+K I+++ + + +VE+ L+ +N
Sbjct: 12 VEEVVGRGAFGVVCKAKWRAKD---VAIKQIESE-SERKAFIVELRQLSRVNHP------ 61
Query: 172 HHIVRIYEYFVCQRHLCICFELLDS-NLYELIK----INHFRGLSLSIVQLFSKQILRGL 226
+IV++Y C +C+ E + +LY ++ + ++ L Q + L
Sbjct: 62 -NIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLL 286
++ +IH DLKP N+LL +KI DFG+AC + + S + +PEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 176
Query: 287 GYQYTTAIDMWSFGCIVAELF 307
G Y+ D++S+G I+ E+
Sbjct: 177 GSNYSEKCDVFSWGIILWEVI 197
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 26 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 75
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 76 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 133 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 189
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 238
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 27 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 76
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 77 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 134 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 190
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 23 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 72
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 73 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 130 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 186
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y++ D LG GTFG+V VAVKI+ Q + ++ N K R
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK-REIQNLKLFRHP 71
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
HI+++Y+ + E + L++ I H R + +LF +QIL +
Sbjct: 72 --HIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLF-QQILSAVDYC 127
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLG 287
++H DLKPEN+LL + KI DFG + ++ + + S Y +PEV+ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 288 YQYTT-AIDMWSFGCIVAELFLG 309
Y +D+WS G I+ L G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E ++ +L++ I L + + F
Sbjct: 67 KVSSGFS-----GVIRLLDWFERPDSFVLILERMEPVQDLFDFI--TERGALQEELARSF 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 278 YYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + Y +P ++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKYDREDKHHIV 175
+G G+ G V VAVK + + ++ L EV I+ + Y E+ +V
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM----RDYQHEN---VV 80
Query: 176 RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y ++ L + E L+ I + H R ++ + +L+ LS+L G+I
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDI-VTHTR-MNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQYTT 292
H D+K ++ILL +K+ DFG + V + + Y+ +PE++ Y
Sbjct: 139 HRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 293 AIDMWSFGCIVAELFLGLP 311
+D+WS G +V E+ G P
Sbjct: 196 EVDIWSLGIMVIEMVDGEP 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKC-WD---AEMNSFVAVKIIKNQ-PAYYQQALVEVSILT 160
E +YI + LG G FG V C +D + VAVK +++ P + E+ IL
Sbjct: 9 ERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 161 TLNKKYDREDKHHIV--RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLF 218
L+ + IV R Y ++ L + E L S H L S + L+
Sbjct: 67 ALHSDF-------IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
S QI +G+ L +H DL NIL+ + A +KI DFG A D+ Y +
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 277 R----YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
++ +PE L ++ D+WSFG ++ ELF
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 110/265 (41%), Gaps = 57/265 (21%)
Query: 117 LGHGTFGQVAKCWDAEMNSF----------VAVKIIKNQPAY--YQQALVEVSILTTLNK 164
LG G FGQV E ++F VAVK++K + ++ + E+ IL +
Sbjct: 35 LGRGAFGQVI-----EADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG- 88
Query: 165 KYDREDKHHIVRIYEYFVCQRH---LCICFELLD-SNL--YELIKINHF--------RGL 210
HH+ + C + L + E NL Y K N F L
Sbjct: 89 -------HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270
+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R +
Sbjct: 142 TLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLA----RDI 194
Query: 271 Y---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EF 319
Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 320 DLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQT 279
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ RG+ L + +H DL N +L S +K+ DFG A DR YS Q
Sbjct: 129 FGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT---VKVADFGLARDILDREYYSVQQH 185
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321
R+ R P E L Y++TT D+WSFG ++ EL G P + FDL
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 22 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 71
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 72 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 129 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 185
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 33/236 (13%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D ++ VAVK+++ P++Y + E LN
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 89
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y+ + I E +D L I H G ++
Sbjct: 90 A-------IVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 140
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---------CTEDRTVY 271
+ L+ GIIH D+KP NI++ + +K++DFG A T+ V
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Q Y SPE G D++S GC++ E+ G P F G S + + +R
Sbjct: 198 GTAQ---YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 250
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKC-WDA---EMNSFVAVKIIKNQ-PAYYQQALVEVSILT 160
E +YI + LG G FG V C +D + VAVK +++ P + E+ IL
Sbjct: 10 ERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 161 TLNKKYDREDKHHIV--RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLF 218
L+ + IV R Y ++ L + E L S H L S + L+
Sbjct: 68 ALHSDF-------IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
S QI +G+ L +H DL NIL+ + A +KI DFG A D+ Y +
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 277 R----YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
++ +PE L ++ D+WSFG ++ ELF
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 21 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 70
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 71 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 128 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G+FG++ + + N VA+K+ +N + Q L E I L + I
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRIL------QGGTGIPN 67
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIH 236
+ + V + + +LL +L +L R LSL V + + Q++ + + +H
Sbjct: 68 VRWFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLH 126
Query: 237 CDLKPENILLCTSVKPAEIKIIDFGSACT-EDRTVYSYIQSR---------YYRSPEVLL 286
D+KP+N L+ + ++ IIDFG A D + + +I R Y S L
Sbjct: 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHL 186
Query: 287 GYQYTTAIDMWSFGCIVAELFLG 309
G + + D+ S G ++ G
Sbjct: 187 GIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 249
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 250 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 309
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQT 335
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 33/236 (13%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D + VAVK+++ P++Y + E LN
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y+ + I E +D L I H G ++
Sbjct: 73 A-------IVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---------CTEDRTVY 271
+ L+ GIIH D+KP NI++ + +K++DFG A T+ V
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
Q Y SPE G D++S GC++ E+ G P F G S + + +R
Sbjct: 181 GTAQ---YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 247
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 248 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 307
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQT 333
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 275 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 324
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 325 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 383
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYY----RSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A + Y+ Q + +PE L +
Sbjct: 384 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y++ D LG GTFG+V VAVKI+ Q + ++ N K R
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK-REIQNLKLFRHP 71
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
HI+++Y+ + E + L++ I H R + +LF +QIL +
Sbjct: 72 --HIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLF-QQILSAVDYC 127
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLG 287
++H DLKPEN+LL + KI DFG + ++ + S Y +PEV+ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 288 YQYTT-AIDMWSFGCIVAELFLG 309
Y +D+WS G I+ L G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 101
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 102 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 154
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 212
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII---KNQPAYYQQALVEVSI---LTTLNK 164
Y VK+ +G G++ +C N AVKII K P + L+ + TL
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 165 KYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR 224
YD Y Y V + L ELLD ++++ F S V LF+ I +
Sbjct: 84 VYDDGK-------YVYVVTE--LXKGGELLD----KILRQKFFSEREASAV-LFT--ITK 127
Query: 225 GLSLLKDAGIIHCDLKPENILLC-TSVKPAEIKIIDFGSAC---TEDRTVYSYIQSRYYR 280
+ L G++H DLKP NIL S P I+I DFG A E+ + + + +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF---PGASEFDLLRRM 325
+PEVL Y A D+WS G ++ G F P + ++L R+
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARI 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 199
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 200 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 259
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQT 285
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 21 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 70
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 71 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 128 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 188
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 189 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQT 274
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 240
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 241 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 300
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQT 326
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 188
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 189 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQT 274
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAVKII K Q + Q+ EV I+ LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAVKII K Q + Q+ EV I+ LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 68 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 242
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 302
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQT 328
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 83 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKC-WD---AEMNSFVAVKIIKNQ-PAYYQQALVEVSILT 160
E +YI + LG G FG V C +D + VAVK +++ P + E+ IL
Sbjct: 22 ERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 161 TLNKKYDREDKHHIV--RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLF 218
L+ + IV R Y ++ L + E L S H L S + L+
Sbjct: 80 ALHSDF-------IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQS 276
S QI +G+ L +H DL NIL+ + A +KI DFG A D+ Y +
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 277 R----YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
++ +PE L ++ D+WSFG ++ ELF
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
LG G+FG+V E + A+KI+ Q + L E IL +N +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 173 HIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V++ F +L + E + L +I F S + ++ QI+ L
Sbjct: 103 -LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLH 158
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
+I+ DLKPEN+L+ + I++ DFG A + + +PE++L Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGY 215
Query: 291 TTAIDMWSFGCIVAELFLGLPLF 313
A+D W+ G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 33/226 (14%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKK 165
RY + ++LG G +V D + VAVK+++ P++Y + E LN
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 166 YDREDKHHIVRIYEYFVCQRHLC----ICFELLDSNLYELIKINHFRG-LSLSIVQLFSK 220
IV +Y+ + I E +D L I H G ++
Sbjct: 73 A-------IVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEVIA 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---------CTEDRTVY 271
+ L+ GIIH D+KP NI++ + +K++DFG A T+ V
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 272 SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317
Q Y SPE G D++S GC++ E+ G P F G S
Sbjct: 181 GTAQ---YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 16 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 65
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 66 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH DL+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 123 RNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 228
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 197
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 198 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQT 283
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A R
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----RD 234
Query: 270 VY---SYIQSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-E 318
+Y Y++ R +PE + YT D+WSFG ++ E+F LG +PG +
Sbjct: 235 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294
Query: 319 FDLLRRMIRILGAQPPDYVLKEAKNT 344
+ RR+ + PDY E T
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQT 320
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 82 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 134
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
LG G FG V + + + VA+K++ K+Q Q E+ I L H
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL---------H 81
Query: 173 H--IVRIYEYFVCQRHLCICFELL-DSNLY-ELIKINHFRGLSLSIVQLFSKQILRGLSL 228
H I+R+Y YF +R + + E LY EL K F + + +++ L
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM---EELADALMY 138
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG----SACTEDRTVYSYIQSRYYRSPEV 284
+IH D+KPEN+ E+KI DFG + +T+ + Y PE+
Sbjct: 139 CHGKKVIHRDIKPENL---LLGLKGELKIADFGWSVHAPSLRRKTMCGTLD---YLPPEM 192
Query: 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328
+ G + +D+W G + EL +G P F AS + RR++++
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 55 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 114
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 115 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 167
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 225
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 83 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 83 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VA+KII K Q P Q+ EV I+ LN +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP-------N 75
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQIVSAVQYCHQKR 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ + Y +PE+ G +Y
Sbjct: 135 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA-QPPDYVLKEAKNTSKFFK 349
+D+WS G I+ L G F G + +L R++R G + P Y+ + +N K F
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKYRIPFYMSTDCENLLKRFL 249
Query: 350 CIGSV 354
+ +
Sbjct: 250 VLNPI 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-HI 174
++G G++ +V + + A++++K + + ++ + T +++ H +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE---DIDWVQTEKHVFEQASNHPFL 115
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V ++ F + L E ++ + + R L + +S +I L+ L + GI
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 174
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRSPEVLLGYQY 290
I+ DLK +N+LL + IK+ D+G C E T ++ + Y +PE+L G Y
Sbjct: 175 IYRDLKLDNVLLDSE---GHIKLTDYG-MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 291 TTAIDMWSFGCIVAELFLG 309
++D W+ G ++ E+ G
Sbjct: 231 GFSVDWWALGVLMFEMMAG 249
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 82 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 134
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 51/263 (19%)
Query: 117 LGHGTFGQVAKCWDAEMNSF----------VAVKIIKNQPAY--YQQALVEVSILTTLNK 164
LG G FGQV E ++F VAVK++K + ++ + E+ IL +
Sbjct: 37 LGRGAFGQVI-----EADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG- 90
Query: 165 KYDREDKHHIVRIYEYFVCQRH---LCICFELLD-SNL--YELIKINHF----------R 208
HH+ + C + L + E NL Y K N F
Sbjct: 91 -------HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD 143
Query: 209 GLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTE 266
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A +
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXK 200
Query: 267 DRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDL 321
D +R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 322 LRRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQT 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 110 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 162
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 96 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 147
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 205
Query: 277 RYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 96 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 147
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 205
Query: 277 RYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 95 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 146
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 204
Query: 277 RYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 96 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-HI 174
++G G++ +V + + A+K++K + + ++ + T +++ H +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQASNHPFL 72
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V ++ F + L E ++ + + R L + +S +I L+ L + GI
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 131
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRSPEVLLGYQY 290
I+ DLK +N+LL + IK+ D+G C E T + + Y +PE+L G Y
Sbjct: 132 IYRDLKLDNVLLDSE---GHIKLTDYG-MCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 291 TTAIDMWSFGCIVAELFLG 309
++D W+ G ++ E+ G
Sbjct: 188 GFSVDWWALGVLMFEMMAG 206
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 95 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 96 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 57/259 (22%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-----SFVAVKIIKNQ--PAYYQQALVEVSILT 160
++ ++ LG G FG+V K + + VAVK++K P+ + L E ++L
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL-----LDSNLYELIKIN---------- 205
+N H++++Y L + E L L E K+
Sbjct: 82 QVNHP-------HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 206 --------HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257
R L++ + F+ QI +G+ L + ++H DL NIL+ K +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK---MKI 191
Query: 258 IDFGSACTEDRTVY---SYIQSRYYRSP------EVLLGYQYTTAIDMWSFGCIVAELF- 307
DFG + R VY SY++ R P E L + YTT D+WSFG ++ E+
Sbjct: 192 SDFGLS----RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 308 LG---LPLFPGASEFDLLR 323
LG P P F+LL+
Sbjct: 248 LGGNPYPGIPPERLFNLLK 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAV+II K Q + Q+ EV I+ LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKII----------KNQPAYYQQALVEVSILTTLN 163
K++LG G V +C AVKII + + L EV IL ++
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+I+++ + + + F+L+ ++ + +++ + +++I+
Sbjct: 82 ------GHPNIIQLKDTYETNTFFFLVFDLMKKG-----ELFDYLTEKVTLSEKETRKIM 130
Query: 224 RGL----SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSR 277
R L L I+H DLKPENILL + IK+ DFG +C D + S +
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSVCGTP 187
Query: 278 YYRSPEVLLGYQ------YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y +DMWS G I+ L G P F + +LR ++
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 95 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 30 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 89
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 90 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 142
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 200
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 68 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
YI+ D LG GTFG+V VAVKI+ Q + ++ N K R
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR-REIQNLKLFRHP 76
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
HI+++Y+ + + E + L++ I N R +LF +QIL G+
Sbjct: 77 --HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLF-QQILSGVDYC 132
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLG 287
++H DLKPEN+LL + KI DFG + ++ + S Y +PEV+ G
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG 189
Query: 288 YQYTT-AIDMWSFGCIVAELFLG 309
Y +D+WS G I+ L G
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCG 212
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTL 162
T + V ++G G FG+V C A+ A+K + + +Q AL E +L+ +
Sbjct: 186 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 245
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSK 220
+ D IV + F L +L++ Y L + F S + ++ ++
Sbjct: 246 STG----DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAA 298
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-EDRTVYSYIQSRYY 279
+I+ GL + + +++ DLKP NILL + ++I D G AC + ++ + + Y
Sbjct: 299 EIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGY 355
Query: 280 RSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL--LRRMIRILGAQPPD 335
+PEVL G Y ++ D +S GC++ +L G F D + RM + + PD
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 414
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAVKII K Q + Q+ EV I+ LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + ++ + Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-HI 174
++G G++ +V + + A+K++K + + ++ + T +++ H +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQASNHPFL 68
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V ++ F + L E ++ + + R L + +S +I L+ L + GI
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 127
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRSPEVLLGYQY 290
I+ DLK +N+LL + IK+ D+G C E T + + Y +PE+L G Y
Sbjct: 128 IYRDLKLDNVLLDSE---GHIKLTDYG-MCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 291 TTAIDMWSFGCIVAELFLG 309
++D W+ G ++ E+ G
Sbjct: 184 GFSVDWWALGVLMFEMMAG 202
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTL 162
T + V ++G G FG+V C A+ A+K + + +Q AL E +L+ +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSK 220
+ D IV + F L +L++ Y L + F S + ++ ++
Sbjct: 247 STG----DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAA 299
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-EDRTVYSYIQSRYY 279
+I+ GL + + +++ DLKP NILL + ++I D G AC + ++ + + Y
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 280 RSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL--LRRMIRILGAQPPD 335
+PEVL G Y ++ D +S GC++ +L G F D + RM + + PD
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 113 VKDLLGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+++++G G FG+V + W + VAVK ++ P +E + K +
Sbjct: 11 LEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIEN--VRQEAKLFAMLKH 65
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+I+ + + + +LC+ E L ++ + + I+ ++ QI RG++ L D
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGG--PLNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 232 AGI---IHCDLKPENILLCTSVKPAEI-----KIIDFGSACTEDRTVYSYIQSRY-YRSP 282
I IH DLK NIL+ V+ ++ KI DFG A RT Y + +P
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAP 183
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315
EV+ ++ D+WS+G ++ EL G F G
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 95 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 278 YYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 67 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 119
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 110 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 162
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 278 YYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH-HI 174
++G G++ +V + + A+K++K + + ++ + T +++ H +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQASNHPFL 83
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V ++ F + L E ++ + + R L + +S +I L+ L + GI
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 142
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTED----RTVYSYIQSRYYRSPEVLLGYQY 290
I+ DLK +N+LL + IK+ D+G C E T + + Y +PE+L G Y
Sbjct: 143 IYRDLKLDNVLLDSE---GHIKLTDYG-MCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 291 TTAIDMWSFGCIVAELFLG 309
++D W+ G ++ E+ G
Sbjct: 199 GFSVDWWALGVLMFEMMAG 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKH 172
+G G+FG+V + A+K + Q + E+ I+ L +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF------ 76
Query: 173 HIVRIYEYFVCQRHLCICFELL--DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230
+V ++ F + + + +LL Y L + HF+ V+LF +++ L L+
Sbjct: 77 -LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE---ETVKLFICELVMALDYLQ 132
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSYIQSRYYRSPEVL--- 285
+ IIH D+KP+NILL + + I DF A R + + ++ Y +PE+
Sbjct: 133 NQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 286 LGYQYTTAIDMWSFGCIVAELFLG 309
G Y+ A+D WS G EL G
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 123 GQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180
GQ + W N + VAVK +K L E +++ L + +VR+Y
Sbjct: 24 GQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RLVRLYA- 75
Query: 181 FVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKDAGIIHC 237
V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++ IH
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 238 DLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQYTTA 293
DL+ NIL+ ++ KI DFG A ED + +++ + +PE + +T
Sbjct: 134 DLRAANILVSDTLS---CKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 68 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 278 YYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VAVK +K L E +++ L + +
Sbjct: 17 LGAGQFGEV---WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ-------RL 66
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLF--SKQILRGLSLLKD 231
VR+Y V Q + I E +++ +L + +K G+ L+I +L + QI G++ +++
Sbjct: 67 VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLG 287
IH +L+ NIL+ ++ KI DFG A ED + +++ + +PE +
Sbjct: 124 RNYIHRNLRAANILVSDTLS---CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 180
Query: 288 YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPD 335
+T D+WSFG ++ E+ G +PG + ++++ + R PD
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAV+II K Q + Q+ EV I+ LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL + IKI DFG + T + + S Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 108/264 (40%), Gaps = 52/264 (19%)
Query: 117 LGHGTFGQVAKCWDAEMNSF----------VAVKIIKNQPAY--YQQALVEVSILTTLNK 164
LG G FGQV E ++F VAVK++K + ++ + E+ IL +
Sbjct: 36 LGRGAFGQVI-----EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG- 89
Query: 165 KYDREDKHHIVRIYEYFVCQRH---LCICFELLD-SNL--YELIKINHF----------- 207
HH+ + C + L + E NL Y K N F
Sbjct: 90 -------HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 208 RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CT 265
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIX 199
Query: 266 EDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFD 320
+D +R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 321 LLRRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQT 283
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTED 267
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A +D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKD 192
Query: 268 RTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLL 322
+R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 323 RRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQT 274
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQPAYYQQALVEVSILTTLNKKYD 167
+ + +LG+G+ G V SF VAVK + + AL+E+ +LT +
Sbjct: 36 VSEKILGYGSSGTVV-----FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLT------E 82
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-----KQI 222
+D +++R Y R L I EL + NL +L++ + +L + + ++ +QI
Sbjct: 83 SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTS----------VKPAEIKIIDFGSACTEDRTVYS 272
G++ L IIH DLKP+NIL+ TS + I I DFG D
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 273 YIQSRY-------YRSPEVL---LGYQYTTAIDMWSFGCI 302
+ + +R+PE+L + T +ID++S GC+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTED 267
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A +D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKD 192
Query: 268 RTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLL 322
+R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 323 RRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQT 274
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQPAYYQQALVEVSILTTLNKKYD 167
+ + +LG+G+ G V SF VAVK + + AL+E+ +LT +
Sbjct: 36 VSEKILGYGSSGTVV-----FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLT------E 82
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-----KQI 222
+D +++R Y R L I EL + NL +L++ + +L + + ++ +QI
Sbjct: 83 SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTS----------VKPAEIKIIDFGSACTEDRTVYS 272
G++ L IIH DLKP+NIL+ TS + I I DFG D
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 273 YIQSRY-------YRSPEVL---LGYQYTTAIDMWSFGCI 302
+ + +R+PE+L + T +ID++S GC+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTL 162
T + V ++G G FG+V C A+ A+K + + +Q AL E +L+ +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSK 220
+ D IV + F L +L++ Y L + F S + ++ ++
Sbjct: 247 STG----DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAA 299
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-EDRTVYSYIQSRYY 279
+I+ GL + + +++ DLKP NILL + ++I D G AC + ++ + + Y
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 280 RSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL--LRRMIRILGAQPPD 335
+PEVL G Y ++ D +S GC++ +L G F D + RM + + PD
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----ALVEVSILTTL 162
T + V ++G G FG+V C A+ A+K + + +Q AL E +L+ +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN--LYELIKINHFRGLSLSIVQLFSK 220
+ D IV + F L +L++ Y L + F S + ++ ++
Sbjct: 247 STG----DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAA 299
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-EDRTVYSYIQSRYY 279
+I+ GL + + +++ DLKP NILL + ++I D G AC + ++ + + Y
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 280 RSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL--LRRMIRILGAQPPD 335
+PEVL G Y ++ D +S GC++ +L G F D + RM + + PD
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAVKII + Q+ EV I LN +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP-------N 74
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
IV+++E ++ L + E + H R F +QI+ +
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-RQIVSAVQYCHQKF 133
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQYT 291
I+H DLK EN+LL IKI DFG + T + ++ + Y +PE+ G +Y
Sbjct: 134 IVHRDLKAENLLLDAD---XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 292 T-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTED 267
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A +D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKD 201
Query: 268 RTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLL 322
+R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 323 RRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQT 283
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 63 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 114
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 277 RYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 6 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 65
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLF 218
++ + ++R+ ++F + E + +L++ I L + + F
Sbjct: 66 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 118
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQSR 277
Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +R
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTR 176
Query: 278 YYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
Y PE + ++Y + +WS G ++ ++ G
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 36/235 (15%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKII----------KNQPAYYQQALVEVSILTTLN 163
K++LG G V +C AVKII + + L EV IL ++
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+I+++ + + + F+L+ ++ + +++ + +++I+
Sbjct: 82 ------GHPNIIQLKDTYETNTFFFLVFDLMKKG-----ELFDYLTEKVTLSEKETRKIM 130
Query: 224 RGL----SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSR 277
R L L I+H DLKPENILL + IK+ DFG +C D + +
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTP 187
Query: 278 YYRSPEVLLGYQ------YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y +DMWS G I+ L G P F + +LR ++
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 49/232 (21%)
Query: 108 QRRYIVKDLLGHGTFGQV--AKCWD---AEMNSFVAVKIIKNQPAYYQQAL-VEVSILTT 161
+R ++K LG G FG+V A+C + + VAVK +K +Q E +LT
Sbjct: 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM 99
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINH------FRG------ 209
L + HIVR + R L + FE + +H G
Sbjct: 100 LQHQ-------HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 210 --LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267
L L + + Q+ G+ L +H DL N L+ + +KI DFG +
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV---VKIGDFGMS---- 205
Query: 268 RTVYSYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
R +YS + YYR PE +L ++TT D+WSFG ++ E+F
Sbjct: 206 RDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTED 267
L+L + +S Q+ +G+ L IH DL NILL + +KI DFG A +D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 201
Query: 268 RTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLL 322
+R + +PE + YT D+WSFG ++ E+F LG +PG + +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 323 RRMIRILGAQPPDYVLKEAKNT 344
RR+ + PDY E T
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQT 283
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +++++G G V + A VA+K I + + S+ L +
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-------QTSMDELLKEIQAMSQ 69
Query: 171 KHH--IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRG------LSLSIVQLFSKQ 221
HH IV Y FV + L + +LL ++ ++IK +G L S + ++
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--------TEDRTVYSY 273
+L GL L G IH D+K NILL + ++I DFG + T ++ ++
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 274 IQSRYYRSPEVL---LGYQYTTAIDMWSFGCIVAELFLG 309
+ + + +PEV+ GY + D+WSFG EL G
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKA--DIWSFGITAIELATG 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKC-WDA---EMNSFVAVKIIKNQ-PAYYQQALVEVSILT 160
E +YI + LG G FG V C +D + VAVK +++ P + E+ IL
Sbjct: 6 ERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 161 TLNKKYDREDKHHIV--RIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLF 218
L+ + IV R Y + L + E L S H L S + L+
Sbjct: 64 ALHSDF-------IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 116
Query: 219 SKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA----CTEDRTVYSYI 274
S QI +G+ L +H DL NIL+ + A +KI DFG A +D V
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 275 QSR--YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
++ +PE L ++ D+WSFG ++ ELF
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
V++Y + +C + +L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L ++
Sbjct: 136 VHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 291 TTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 63 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 114
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 115 FFWQVLEAVRHCHNXGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 277 RYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
Y +++++G G V + A VA+K I + + S+ L +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-------QTSMDELLKEIQAMSQ 64
Query: 171 KHH--IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRG------LSLSIVQLFSKQ 221
HH IV Y FV + L + +LL ++ ++IK +G L S + ++
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--------TEDRTVYSY 273
+L GL L G IH D+K NILL + ++I DFG + T ++ ++
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 274 IQSRYYRSPEVL---LGYQYTTAIDMWSFGCIVAELFLG 309
+ + + +PEV+ GY + D+WSFG EL G
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKA--DIWSFGITAIELATG 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 37/220 (16%)
Query: 108 QRRYI--VKDLLGHGTFGQVA-KCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSIL 159
+RY+ ++DL G G FG+V+ C+D + VAVK +K P + E+ IL
Sbjct: 29 HKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFR------GLSLS 213
TL + HI++ C+ +L+ E + + R + L+
Sbjct: 88 RTLYHE-------HIIKYKG--CCEDAGAASLQLV----MEYVPLGSLRDYLPRHSIGLA 134
Query: 214 IVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY 271
+ LF++QI G++ L IH DL N+LL +KI DFG A E Y
Sbjct: 135 QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEXY 191
Query: 272 SYIQS----RYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ ++ +PE L Y++ A D+WSFG + EL
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL-------VEVSILT 160
+ +Y V LLG G FG V N VA+K ++ L +EV +L
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD--SNLYELIKINHFRG-LSLSIVQL 217
++ + ++R+ ++F + E + +L++ I RG L + +
Sbjct: 63 KVSSGFS-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFIT---ERGALQEELARS 114
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYS-YIQS 276
F Q+L + + G++H D+K ENIL+ + E+K+IDFGS TVY+ + +
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 277 RYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 48/225 (21%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQPAYYQQALVEVSILTTLNKKYD 167
+ + +LG+G+ G V SF VAVK + + AL+E+ +LT +
Sbjct: 18 VSEKILGYGSSGTVVF-----QGSFQGRPVAVK--RMLIDFCDIALMEIKLLT------E 64
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-----KQI 222
+D +++R Y R L I EL + NL +L++ + +L + + ++ +QI
Sbjct: 65 SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTS----------VKPAEIKIIDFGSACTEDRTVYS 272
G++ L IIH DLKP+NIL+ TS + I I DFG C + + S
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG-LCKKLDSGQS 183
Query: 273 YIQSRY--------YRSPEVL-------LGYQYTTAIDMWSFGCI 302
++ +R+PE+L + T +ID++S GC+
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-----SFVAVKIIKNQ--PAYYQQALVEVSILT 160
++ ++ LG G FG+V K + + VAVK++K P+ + L E ++L
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL-----LDSNLYELIKIN---------- 205
+N H++++Y L + E L L E K+
Sbjct: 82 QVNHP-------HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 206 --------HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257
R L++ + F+ QI +G+ L + ++H DL NIL+ K +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK---MKI 191
Query: 258 IDFGSA--CTEDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LG-- 309
DFG + E+ + Q R + + E L + YTT D+WSFG ++ E+ LG
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 310 -LPLFPGASEFDLLR 323
P P F+LL+
Sbjct: 252 PYPGIPPERLFNLLK 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 36/235 (15%)
Query: 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKII----------KNQPAYYQQALVEVSILTTLN 163
K++LG G V +C AVKII + + L EV IL ++
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+I+++ + + + F+L+ ++ + +++ + +++I+
Sbjct: 69 ------GHPNIIQLKDTYETNTFFFLVFDLMKKG-----ELFDYLTEKVTLSEKETRKIM 117
Query: 224 RGL----SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED--RTVYSYIQSR 277
R L L I+H DLKPENILL + IK+ DFG +C D + +
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTP 174
Query: 278 YYRSPEVLLGYQ------YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y +PE++ Y +DMWS G I+ L G P F + +LR ++
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVKI+K P +Q EV++L R+ +H
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVL--------RKTRH 91
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ ++ + +L I + + S+LY+ + + + ++ + ++Q +G+ L
Sbjct: 92 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-ARQTAQGMDYLHA 150
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR-----TVYSYIQSRYYRSPEVLL 286
IIH D+K NI L + +KI DFG A + R V S + +PEV+
Sbjct: 151 KNIIHRDMKSNNIFLHEGL---TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
++ D++S+G ++ EL G
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-----SFVAVKIIKNQ--PAYYQQALVEVSILT 160
++ ++ LG G FG+V K + + VAVK++K P+ + L E ++L
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL-----LDSNLYELIKIN---------- 205
+N H++++Y L + E L L E K+
Sbjct: 82 QVNHP-------HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 206 --------HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257
R L++ + F+ QI +G+ L + ++H DL NIL+ K +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK---MKI 191
Query: 258 IDFGSA--CTEDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LG-- 309
DFG + E+ + Q R + + E L + YTT D+WSFG ++ E+ LG
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 310 -LPLFPGASEFDLLR 323
P P F+LL+
Sbjct: 252 PYPGIPPERLFNLLK 266
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 50/233 (21%)
Query: 108 QRRYIVKDLLGHGTFGQV--AKCWD---AEMNSFVAVKIIKN-QPAYYQQALVEVSILTT 161
+R ++K LG G FG+V A+C++ + VAVK +K+ A + E +LT
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN 73
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELL---DSNLY-------ELIKIN----HF 207
L + HIV+ Y L + FE + D N + +I ++
Sbjct: 74 LQHE-------HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 208 RG-LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266
+G L LS + + QI G+ L +H DL N L+ ++ +KI DFG +
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL---VKIGDFGMS--- 180
Query: 267 DRTVYSYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
R VYS + YYR PE ++ ++TT D+WSFG I+ E+F
Sbjct: 181 -RDVYS---TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 23 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 72
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E ++ +L + +K + L L + S QI G++ ++
Sbjct: 73 VQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 132 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQALVEVSILTTLN 163
Y V ++G G FG+V A+K++ ++ A++ + E I+ N
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFAN 133
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ +V+++ F ++L + E + +L+ + + + ++ +++
Sbjct: 134 SPW-------VVQLFCAFQDDKYLYMVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVV 184
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY----Y 279
L + G+IH D+KP+N+LL K +K+ DFG+ D T + + Y
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY 241
Query: 280 RSPEVLL-----GYQYTTAIDMWSFGCIVAELFLG 309
SPEVL GY Y D WS G + E+ +G
Sbjct: 242 ISPEVLKSQGGDGY-YGRECDWWSVGVFLFEMLVG 275
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 23 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 72
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E ++ +L + +K + L L + S QI G++ ++
Sbjct: 73 VQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 132 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
+++Y + +G G G V D VA++ + Q ++ ++ E+ ++
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM------- 71
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
RE+K+ +IV + ++ L + E L L + + + ++ L+
Sbjct: 72 -RENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSP 282
L L +IH D+K +NILL +K+ DFG E + + + Y+ +P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
EV+ Y +D+WS G + E+ G P
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 108 QRRYIVKDLLGHGTFGQV--AKCWDA---EMNSFVAVKIIKNQPAYYQQAL-VEVSILTT 161
+R ++K LG G FG+V A+C + + VAVK +K +Q E +LT
Sbjct: 11 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM 70
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINH------FRG------ 209
L + HIVR + R L + FE + +H G
Sbjct: 71 LQHQ-------HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 210 --LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267
L L + + Q+ G+ L +H DL N C + +KI DFG +
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN---CLVGQGLVVKIGDFGMS---- 176
Query: 268 RTVYSYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
R +YS + YYR PE +L ++TT D+WSFG ++ E+F
Sbjct: 177 RDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 107 TQRRYIVKDLLGHGTFGQV--AKCW-DAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTL 162
T + ++ +G G F +V A C D + V+I A + + E+ +L L
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSI----VQL 217
N ++++ Y F+ L I EL D+ +L +IK HF+ I V
Sbjct: 90 NHP-------NVIKYYASFIEDNELNIVLELADAGDLSRMIK--HFKKQKRLIPERTVWK 140
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTS--VKPAEIKIIDFGSACTEDRTVYSYIQ 275
+ Q+ L + ++H D+KP N+ + + VK ++ + F S+ T +S +
Sbjct: 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVG 198
Query: 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAEL 306
+ YY SPE + Y D+WS GC++ E+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 192 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 241
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 242 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 301 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 432
Query: 172 HHIVRIYEYFVCQRHLCIC--FELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
IVR+ + + + EL N Y L + H + +I++L Q+ G+ L
Sbjct: 433 --IVRMIGICEAESWMLVMEMAELGPLNKY-LQQNRHVK--DKNIIELVH-QVSMGMKYL 486
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRSPE 283
+++ +H DL N+LL T KI DFG A D Y + ++ + +PE
Sbjct: 487 EESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 284 VLLGYQYTTAIDMWSFGCIVAELF 307
+ Y++++ D+WSFG ++ E F
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAF 567
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 46/220 (20%)
Query: 116 LLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+LG+G+ G V SF VAVK + + AL+E+ +LT + +D
Sbjct: 22 ILGYGSSGTVVF-----QGSFQGRPVAVK--RMLIDFCDIALMEIKLLT------ESDDH 68
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS-----KQILRGL 226
+++R Y R L I EL + NL +L++ + +L + + ++ +QI G+
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 227 SLLKDAGIIHCDLKPENILLCTS----------VKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ L IIH DLKP+NIL+ TS + I I DFG D + +
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 277 RY-------YRSPEVL-------LGYQYTTAIDMWSFGCI 302
+R+PE+L + T +ID++S GC+
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKII-KNQ--PAYYQQALVEVSILTTLNKKYDREDKHH 173
+G G F +V VAVKII K Q + Q+ EV I+ LN +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP-------N 67
Query: 174 IVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232
IV+++E ++ L + E +++ + + + + + +QI+ +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF--RQIVSAVQYCHQK 125
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSRYYRSPEVLLGYQY 290
I+H DLK EN+LL + IKI DFG + T + ++ S Y +PE+ G +Y
Sbjct: 126 FIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 291 TT-AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+D+WS G I+ L G F G + +L R++R
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 220
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 192 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 241
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 242 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 301 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 431
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 432 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 483
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 484 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 540
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAF 566
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 108 QRRYIVKDLLGHGTFGQV--AKCWDA---EMNSFVAVKIIKNQPAYYQQAL-VEVSILTT 161
+R ++K LG G FG+V A+C + + VAVK +K +Q E +LT
Sbjct: 17 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM 76
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINH------FRG------ 209
L + HIVR + R L + FE + +H G
Sbjct: 77 LQHQ-------HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 210 --LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267
L L + + Q+ G+ L +H DL N C + +KI DFG +
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN---CLVGQGLVVKIGDFGMS---- 182
Query: 268 RTVYSYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
R +YS + YYR PE +L ++TT D+WSFG ++ E+F
Sbjct: 183 RDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
+++Y + +G G G V D VA++ + Q ++ ++ E+ ++
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM------- 71
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
RE+K+ +IV + ++ L + E L L + + + ++ L+
Sbjct: 72 -RENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYS-YIQSRYYRSP 282
L L +IH D+K +NILL +K+ DFG + T +++ S + + Y+ +P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
EV+ Y +D+WS G + E+ G P
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQAL---VEVSILTTLNK 164
+ Y + LLG G FG V VA+K+I L V + L
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFE--LLDSNLYELIKINHFRGLSLSIVQLFSKQ 221
K H ++R+ ++F Q + E L +L++ I G S + F Q
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--RCFFGQ 147
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS-ACTEDRTVYSYIQSRYYR 280
++ + G++H D+K ENIL+ ++ K+IDFGS A D + +R Y
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYS 205
Query: 281 SPEVLLGYQY-TTAIDMWSFGCIVAELFLG 309
PE + +QY +WS G ++ ++ G
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
+++Y + +G G G V D VA++ + Q ++ ++ E+ ++
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM------- 71
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
RE+K+ +IV + ++ L + E L L + + + ++ L+
Sbjct: 72 -RENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYS-YIQSRYYRSP 282
L L +IH D+K +NILL +K+ DFG + T +++ S + + Y+ +P
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
EV+ Y +D+WS G + E+ G P
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 192 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 241
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 242 VQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 301 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V + D + AVK ++ + + + L+ + LT+ IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE-VFRAEELMACAGLTSPR----------IVP 130
Query: 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y + I ELL+ +L +L+K L + Q L GL L I+
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSACT-------EDRTVYSYI-QSRYYRSPEVLLG 287
H D+K +N+LL S + + DFG A +D YI + + +PEV+LG
Sbjct: 189 HGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 288 YQYTTAIDMWSFGCIVAELFLG 309
+D+WS C++ + G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY---SYI 274
+S Q+ RG+ L IH DL NILL + +KI DFG A R +Y Y+
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSEN---NVVKICDFGLA----RDIYKNPDYV 256
Query: 275 QSRYYR------SPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS-EFDLLRRMI 326
+ R +PE + Y+T D+WS+G ++ E+F LG +PG + D R+
Sbjct: 257 RKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
Query: 327 RILGAQPPDY 336
+ + P+Y
Sbjct: 317 EGMRMRAPEY 326
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 116 LLGHGTFGQV---AKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+LG G +G+V K + A+K++K +A + TT + + +R+
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLK-------KATIVQKAKTTEHTRTERQVLE 113
Query: 173 HI------VRIYEYFVCQRHLCICFELLDSNLYELIK-INHFRGLSLSIVQLFSKQILRG 225
HI V ++ F + L + + ++ EL ++ + VQ++ +I+
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGG--ELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA----CTEDRTVYSYIQSRYYRS 281
L L GII+ D+K ENILL ++ + + DFG + E Y + + Y +
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 282 PEVLLGYQ--YTTAIDMWSFGCIVAELFLGLPLF----PGASEFDLLRRMIRILGAQPP 334
P+++ G + A+D WS G ++ EL G F S+ ++ R RIL ++PP
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR---RILKSEPP 284
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V + D + AVK ++ + + + L+ + LT+ IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE-VFRAEELMACAGLTSPR----------IVP 149
Query: 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y + I ELL+ +L +L+K L + Q L GL L I+
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSA-CTE-DRTVYSYIQSRY------YRSPEVLLG 287
H D+K +N+LL S + + DFG A C + D S + Y + +PEV+LG
Sbjct: 208 HGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 288 YQYTTAIDMWSFGCIVAELFLG 309
+D+WS C++ + G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 16 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 65
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 66 VQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 125 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G V K +AVK I+ +Q +L L+ D V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK----RLLMDLDISMRTVDCPFTVT 114
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
Y + + IC EL+D++L + K I+ + + I+ + I++ L L
Sbjct: 115 FYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS--RYYRSPEVL---LGY 288
+IH D+KP N+L+ ++K+ DFG + +V I + + Y +PE + L
Sbjct: 175 VIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 289 Q-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMI 326
+ Y+ D+WS G + EL L P + F L++++
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
+++Y + +G G G V D VA++ + Q ++ ++ E+ ++
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM------- 72
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
RE+K+ +IV + ++ L + E L L + + + ++ L+
Sbjct: 73 -RENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYS-YIQSRYYRSP 282
L L +IH D+K +NILL +K+ DFG + T +++ S + + Y+ +P
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
EV+ Y +D+WS G + E+ G P
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 72
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L E ++ + R + ++Q ++ QI +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQICKGME 131
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 132 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 193 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL-----RHEK--L 242
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 243 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 301
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG ED + +++ + +PE L +
Sbjct: 302 YVHRDLRAANILVGENLV---CKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 34/207 (16%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
+ +LG G G+V + ++ A+K++++ P +A EV + +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVEL------HWRASQC 70
Query: 172 HHIVRI---YE-YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
HIVRI YE + ++ L I E LD L+ I+ + + K I +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLL 286
L I H D+KPEN+L + A +K+ DFG A +
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-------------------KETT 171
Query: 287 GYQYTTAIDMWSFGCIVAELFLGLPLF 313
G +Y + DMWS G I+ L G P F
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 17 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 66
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 67 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 125
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 126 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 67
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 68 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 119 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 69
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + + ++ +
Sbjct: 129 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 209 GLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268
L + + F Q+L + + G++H D+K ENIL+ + E+K+IDFGS
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD 210
Query: 269 TVYS-YIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLG 309
TVY+ + +R Y PE + ++Y + +WS G ++ ++ G
Sbjct: 211 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 47/235 (20%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ------------------- 150
+Y +KD +G G++G V ++ N++ A+K++ + Q
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 151 --------QALVEVSILTTLNKKYDREDKHHIVRIYEYFV--CQRHLCICFELLDSNLYE 200
Q E++IL L D ++V++ E + HL + FEL++
Sbjct: 74 IQPRGPIEQVYQEIAILKKL-------DHPNVVKLVEVLDDPNEDHLYMVFELVNQG--P 124
Query: 201 LIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260
++++ + LS + + + +++G+ L IIH D+KP N+L+ IKI DF
Sbjct: 125 VMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED---GHIKIADF 181
Query: 261 GSACT---EDRTVYSYIQSRYYRSPEVLLGYQYT---TAIDMWSFGCIVAELFLG 309
G + D + + + + + +PE L + A+D+W+ G + G
Sbjct: 182 GVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 15 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 64
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 65 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 123
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 124 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 270
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 271 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH +L N C + +K+ DFG S T ++ +++
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKK 165
E + Y + + +G G F +V VA+KI+ ++ I N +
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILR 224
+ HI ++Y + + E L++ I I+ R LS ++ +QI+
Sbjct: 67 H-----QHICQLYHVLETANKIFMVLEYCPGGELFDYI-ISQDR-LSEEETRVVFRQIVS 119
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC----TEDRTVYSYIQSRYYR 280
++ + G H DLKPEN+L K +K+IDFG +D + + S Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHK---LKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 281 SPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327
+PE++ G Y + D+WS G ++ L G F + L ++++R
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 78
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 79 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 135
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + Y+ + + +
Sbjct: 136 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 19 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 68
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 69 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 127
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 128 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 30/223 (13%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIK----NQPAYYQQALVEVSILTTLNKKYDRED 170
LG G FG+V W N + VA+K +K + A+ Q+A V I R +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI---------RHE 73
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
K +V++Y V + + I E + +L + +K + L L + + QI G++ +
Sbjct: 74 K--LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVL 285
+ +H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE
Sbjct: 131 ERMNYVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 286 LGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
L ++T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL+ NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLRAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQALVEVSILTTLN 163
Y V ++G G FG+V A+K++ ++ A++ + E I+ N
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFAN 132
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ +V+++ F R+L + E + +L+ + + + ++ +++
Sbjct: 133 SPW-------VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVV 183
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT----VYSYIQSRYY 279
L + G IH D+KP+N+LL K +K+ DFG+ ++ + + + Y
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 280 RSPEVLL-----GYQYTTAIDMWSFGCIVAELFLG 309
SPEVL GY Y D WS G + E+ +G
Sbjct: 241 ISPEVLKSQGGDGY-YGRECDWWSVGVFLYEMLVG 274
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 43/223 (19%)
Query: 108 QRRYI--VKDLLGHGTFGQVA-KCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSIL 159
+RY+ ++DL G G FG+V+ C+D + VAVK +K P + E+ IL
Sbjct: 12 HKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNL---YELIKINHFR------GL 210
TL + HI++ Y C C + + +L E + + R +
Sbjct: 71 RTLYHE-------HIIK---YKGC------CEDQGEKSLQLVMEYVPLGSLRDYLPRHSI 114
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDR 268
L+ + LF++QI G++ L IH +L N+LL +KI DFG A E
Sbjct: 115 GLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDND---RLVKIGDFGLAKAVPEGH 171
Query: 269 TVYSYIQS----RYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y + ++ +PE L Y++ A D+WSFG + EL
Sbjct: 172 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 70
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 129
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH +L NIL+ + +KI DFG +D+ Y + ++ +
Sbjct: 130 YLGTKRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 117 LGHGTFGQVAKCWDAEMN--SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
LG G FG+V W N + VA+K +K + L E ++ L R +K +
Sbjct: 26 LGQGCFGEV---WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEK--L 75
Query: 175 VRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
V++Y V + + I E + +L + +K + L L + + QI G++ ++
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
+H DL NIL+ ++ K+ DFG A ED + +++ + +PE L +
Sbjct: 135 YVHRDLAAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 290 YTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327
+T D+WSFG ++ EL G +PG ++L ++ R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 72
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 73 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 129
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + Y+ + + +
Sbjct: 130 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQALVEVSILTTLN 163
Y V ++G G FG+V A+K++ ++ A++ + E I+ N
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFAN 127
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ +V+++ F R+L + E + +L+ + + + ++ +++
Sbjct: 128 SPW-------VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVV 178
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT----VYSYIQSRYY 279
L + G IH D+KP+N+LL K +K+ DFG+ ++ + + + Y
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 280 RSPEVLL-----GYQYTTAIDMWSFGCIVAELFLG 309
SPEVL GY Y D WS G + E+ +G
Sbjct: 236 ISPEVLKSQGGDGY-YGRECDWWSVGVFLYEMLVG 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K I+ + + E ++ L+ +V+
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHP-------KLVQ 66
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ FE ++ L + ++ RGL + L + G++ L++A +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 125 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 182 SSKSDVWSFGVLMWEVF 198
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 76
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 135
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQSR----YYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 136 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 43/223 (19%)
Query: 108 QRRYI--VKDLLGHGTFGQVA-KCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSIL 159
+RY+ ++DL G G FG+V+ C+D + VAVK +K P + E+ IL
Sbjct: 12 HKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNL---YELIKINHFR------GL 210
TL + HI++ Y C C + + +L E + + R +
Sbjct: 71 RTLYHE-------HIIK---YKGC------CEDQGEKSLQLVMEYVPLGSLRDYLPRHSI 114
Query: 211 SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDR 268
L+ + LF++QI G++ L IH +L N+LL +KI DFG A E
Sbjct: 115 GLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDND---RLVKIGDFGLAKAVPEGH 171
Query: 269 TVYSYIQS----RYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y + ++ +PE L Y++ A D+WSFG + EL
Sbjct: 172 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALV-EVSILTTLNKKY 166
+++Y + +G G G V D VA++ + Q ++ ++ E+ ++
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM------- 72
Query: 167 DREDKH-HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225
RE+K+ +IV + ++ L + E L L + + + ++ L+
Sbjct: 73 -RENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSP 282
L L +IH ++K +NILL +K+ DFG E + + + Y+ +P
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 283 EVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
EV+ Y +D+WS G + E+ G P
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 309
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 310 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH +L N C + +K+ DFG S T ++ +++
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQALVEVSILTTLN 163
Y V ++G G FG+V A+K++ ++ A++ + E I+ N
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFAN 132
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ +V+++ F R+L + E + +L+ + + + ++ +++
Sbjct: 133 SPW-------VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVV 183
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT----VYSYIQSRYY 279
L + G IH D+KP+N+LL K +K+ DFG+ ++ + + + Y
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 280 RSPEVLL-----GYQYTTAIDMWSFGCIVAELFLG 309
SPEVL GY Y D WS G + E+ +G
Sbjct: 241 ISPEVLKSQGGDGY-YGRECDWWSVGVFLYEMLVG 274
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 51/228 (22%)
Query: 112 IVKDLLGHGTFGQV--AKCWDA---EMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKK 165
++K LG G FG+V A+C++ + VAVK +K+ ++ E +LT L +
Sbjct: 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE 75
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRG--------------LS 211
HIV+ Y V L + FE + +L K G L+
Sbjct: 76 -------HIVKFYGVCVEGDPLIMVFEYMKHG--DLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 212 LSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY 271
S + ++QI G+ L +H DL N L+ ++ +KI DFG + R VY
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL---VKIGDFGMS----RDVY 179
Query: 272 SYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
S + YYR PE ++ ++TT D+WS G ++ E+F
Sbjct: 180 S---TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 72
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 131
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 132 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 100
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 159
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 160 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELF 242
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 74
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 133
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 134 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELF 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 69
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 70 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 117 LGHGTFGQVAKCWD--AEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKY----- 166
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 167 ---DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
+ E ++ + E ++L + D N+ EL+ Q+
Sbjct: 73 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVH-----------------QVS 115
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY-- 278
G+ L+++ +H DL N+LL T KI DFG A D Y + ++
Sbjct: 116 MGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 279 -YRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ +PE + Y++++ D+WSFG ++ E F
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAF 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 267
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 268 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH +L N C + +K+ DFG S T ++ +++
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 435
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G FG+V + + + VAVK +K ++ L E +++
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 61
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 62 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 75
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 134
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 135 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 69
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 129 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K IK + E ++ L+ +V+
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDDFIEEAEVMMKLSHP-------KLVQ 86
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ FE ++ L + ++ RGL + L + G++ L++A +
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 145 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 202 SSKSDVWSFGVLMWEVF 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 204 INHFRGLSLSIV---QLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260
I RG L V +LF +QI +G+ + +IH DLKP NI L V ++KI DF
Sbjct: 125 IEKRRGEKLDKVLALELF-EQITKGVDYIHSKKLIHRDLKPSNIFL---VDTKQVKIGDF 180
Query: 261 G--SACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
G ++ D + Y SPE + Y +D+++ G I+AEL
Sbjct: 181 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 72
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQICKGME 131
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 132 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 68
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 69 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 125
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + Y+ + + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 72
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 73 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 129
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + Y+ + + +
Sbjct: 130 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K I+ + + E ++ L+ +V+
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHP-------KLVQ 69
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ FE ++ L + ++ RGL + L + G++ L++A +
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 128 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 185 SSKSDVWSFGVLMWEVF 201
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G G+V + VAVKI+ + A ++ I +NK + E+ +V+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--CINKMLNHEN---VVK 68
Query: 177 IY--------EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
Y +Y + C EL D +I G+ Q F Q++ G+
Sbjct: 69 FYGHRREGNIQYLFLE--YCSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL +KI DFG A +R + + Y +PE
Sbjct: 120 LHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG 309
+L ++ +D+WS G ++ + G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 87
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 146
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 147 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 87
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 146
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 147 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 73
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 132
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 133 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELF 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 67
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 126
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 127 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 68
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 127
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 128 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 117 LGHGTFGQVAKC----WDAEMNSFVAVKIIKNQPAYYQQAL-VEVSILTTLNKKYDREDK 171
LG G FG V C VAVK +++ + + E+ IL +L +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------Q 69
Query: 172 HHIVRIYE---YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
H + Y+ Y +R+L + E L +L + ++ + R + ++Q ++ QI +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGME 128
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVYSYIQS----RYYRS 281
L IH DL NIL+ + +KI DFG +D+ + ++ +
Sbjct: 129 YLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L +++ A D+WSFG ++ ELF
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 61
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 62 ---KEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKY 166
+++ D+LG G V + + A+K+ N +P Q + E +L LN K
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHK- 67
Query: 167 DREDKHHIVRIY--EYFVCQRHLCICFELLD-SNLYELIKI-NHFRGLSLSIVQLFSKQI 222
+IV+++ E RH + E +LY +++ ++ GL S + + +
Sbjct: 68 ------NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSA--CTEDRTVYSYIQSRYY 279
+ G++ L++ GI+H ++KP NI+ + K+ DFG+A +D S + Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181
Query: 280 RSPEVLL--------GYQYTTAIDMWSFGCIVAELFLG-LPLFPGASEFDLLRR----MI 326
P++ +Y +D+WS G G LP P F+ RR M
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP----FEGPRRNKEVMY 237
Query: 327 RILGAQP 333
+I+ +P
Sbjct: 238 KIITGKP 244
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K I+ + + E ++ L+ +V+
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHP-------KLVQ 66
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ FE ++ L + ++ RGL + L + G++ L++A +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 125 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 182 SSKSDVWSFGVLMWEVF 198
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ F L L+
Sbjct: 446 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF-SLDLAS 492
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 549
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K I+ + + E ++ L+ +V+
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHP-------KLVQ 64
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ FE ++ L + ++ RGL + L + G++ L++A +
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 123 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 180 SSKSDVWSFGVLMWEVF 196
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ F L L+
Sbjct: 446 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF-SLDLAS 492
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ + +K+ DFG S ED T Y
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKA 549
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 68
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 69 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKY 166
+++ D+LG G V + + A+K+ N +P Q + E +L LN K
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHK- 67
Query: 167 DREDKHHIVRIY--EYFVCQRHLCICFELLD-SNLYELIKI-NHFRGLSLSIVQLFSKQI 222
+IV+++ E RH + E +LY +++ ++ GL S + + +
Sbjct: 68 ------NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSAC-TEDRTVY-------SY 273
+ G++ L++ GI+H ++KP NI+ + K+ DFG+A ED + Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEY 181
Query: 274 IQSRYYRSPEVLLGYQ--YTTAIDMWSFGCIVAELFLG-LPLFPGASEFDLLRR----MI 326
+ Y + +Q Y +D+WS G G LP P F+ RR M
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP----FEGPRRNKEVMY 237
Query: 327 RILGAQP 333
+I+ +P
Sbjct: 238 KIITGKP 244
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY--YQQALVEVSILTTLN-----KKYDRE 169
LG G +G+V + VAVKI+ + A + E+ I LN K Y
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 170 DKHHIVRIY-EYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+ +I ++ EY C EL D +I G+ Q F Q++ G+
Sbjct: 75 REGNIQYLFLEY-------CSGGELFD-------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
L GI H D+KPEN+LL + +KI DFG A +R + + Y +PE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 284 VLLGYQY-TTAIDMWSFGCIVAELFLG-LP 311
+L ++ +D+WS G ++ + G LP
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 79
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + + + ++ + ++Q RG+ L
Sbjct: 80 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHA 138
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 139 KSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343
Y+ D+++FG ++ EL G + + D + M+ G+ PD +
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG-RGSLSPDLSKVRSNC 254
Query: 344 TSKFFKCIGSVHNIENGEVSIGGRSAY-QALTEIEYEAREL 383
+ + + + E R ++ + L EIE AREL
Sbjct: 255 PKRMKRLMAECLKKKRDE-----RPSFPRILAEIEELAREL 290
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 87
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 88 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 139
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 140 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 196
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAF 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 68
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 69 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 125
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + Y+ + + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 40/221 (18%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAK-CW--DAEMNSF-VAVKIIKNQ--PAYYQQALVEVSIL 159
ET+ R + +LG G FG V K W D E VA+K+++ P ++ L E ++
Sbjct: 16 ETELRKV--KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELI----KINHFR----GLS 211
+ Y R L IC + +L+ ++H R L
Sbjct: 74 AGVGSPY----------------VSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLG 117
Query: 212 LSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRT 269
+ + QI +G+S L+D ++H DL N+L+ + P +KI DFG A D T
Sbjct: 118 SQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKS---PNHVKITDFGLARLLDIDET 174
Query: 270 VYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y + + + E +L ++T D+WS+G V EL
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAK-CWDAEMNSF---VAVKIIKNQPAY--YQQALVEVSIL 159
ET+ R + +LG G FG V K W E S V +K+I+++ +Q + +
Sbjct: 30 ETELRKL--KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCIC----FELLDSNLYELIKINHFR----GLS 211
+L D HIVR+ L +C +L+ L ++H R L
Sbjct: 88 GSL-------DHAHIVRL---------LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALG 131
Query: 212 LSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT----ED 267
++ + QI +G+ L++ G++H +L N+LL + P+++++ DFG A +
Sbjct: 132 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS---PSQVQVADFGVADLLPPDDK 188
Query: 268 RTVYSYIQS--RYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ +YS ++ ++ + G +YT D+WS+G V EL
Sbjct: 189 QLLYSEAKTPIKWMALESIHFG-KYTHQSDVWSYGVTVWELM 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 115 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 284 VLLGYQYT-----------TAIDMWSFGCIVAELFLG 309
+ + D+WS GCI+ + G
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 115 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
Query: 284 VLLGYQYT-----------TAIDMWSFGCIVAELFLG 309
+ + D+WS GCI+ + G
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 20 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 67
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + + + ++ + ++Q RG+ L
Sbjct: 68 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHA 126
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 127 KSIIHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343
Y+ D+++FG ++ EL G + + D + M+ G+ PD +
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG-RGSLSPDLSKVRSNC 242
Query: 344 TSKFFKCIGSVHNIENGEVSIGGRSAY-QALTEIEYEAREL 383
+ + + + E R ++ + L EIE AREL
Sbjct: 243 PKRMKRLMAECLKKKRDE-----RPSFPRILAEIEELAREL 278
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 208 RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CT 265
R L L + FS Q+ +G++ L IH D+ N+LL KI DFG A
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIM 209
Query: 266 EDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
D +R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G+FG+V + D + AVK ++ + + + LV + L++ IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSS----------PRIVP 128
Query: 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y + I ELL+ +L +LIK L + Q L GL L I+
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSA-CTE-DRTVYSYIQSRY------YRSPEVLLG 287
H D+K +N+LL S + + DFG A C + D S + Y + +PEV++G
Sbjct: 187 HGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 288 YQYTTAIDMWSFGCIVAELFLG 309
+D+WS C++ + G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 208 RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CT 265
R L L + FS Q+ +G++ L IH D+ N+LL KI DFG A
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIM 211
Query: 266 EDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
D +R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 61
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 62 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 89
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 90 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 89
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 90 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAK-CWDAEMNSF---VAVKIIKNQPAYYQQALVEVSILTT 161
ET+ R + +LG G FG V K W E S V +K+I+++ V +L
Sbjct: 12 ETELRKL--KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 162 LNKKYDREDKHHIVRIYEYFVCQRHLCIC----FELLDSNLYELIKINHFR----GLSLS 213
D HIVR+ L +C +L+ L ++H R L
Sbjct: 70 -----GSLDHAHIVRL---------LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ 115
Query: 214 IVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT----EDRT 269
++ + QI +G+ L++ G++H +L N+LL + P+++++ DFG A + +
Sbjct: 116 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS---PSQVQVADFGVADLLPPDDKQL 172
Query: 270 VYSYIQS--RYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+YS ++ ++ + G +YT D+WS+G V EL
Sbjct: 173 LYSEAKTPIKWMALESIHFG-KYTHQSDVWSYGVTVWELM 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 208 RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CT 265
R L L + FS Q+ +G++ L IH D+ N+LL KI DFG A
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIM 203
Query: 266 EDRTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
D +R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 42/217 (19%)
Query: 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHI 174
+L+G G FGQV K A+ +IK ++A EV L L+
Sbjct: 17 ELIGSGGFGQVFK---AKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDH---------- 63
Query: 175 VRIYEYFVC-------------------QRHLCICFELLDSNLYELIKINHFRGLSLSIV 215
V I Y C + L I E D E I RG L V
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW-IEKRRGEKLDKV 122
Query: 216 ---QLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTV 270
+LF +QI +G+ + +I+ DLKP NI L V ++KI DFG ++ D
Sbjct: 123 LALELF-EQITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLVTSLKNDGKR 178
Query: 271 YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ Y SPE + Y +D+++ G I+AEL
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 113 VKDL--LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDRED 170
+KDL +G G +G V K +AVK I++ +Q +L L+ D
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK----QLLMDLDVVMRSSD 79
Query: 171 KHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL---RGLS 227
+IV+ Y + IC EL+ ++ + K + + ++ K L + L+
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 228 LLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRS 281
LK+ IIH D+KP NILL S IK+ DFG + V S ++R Y +
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRS---GNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMA 193
Query: 282 PEVL------LGYQYTTAIDMWSFGCIVAELFLGLPLFPG-ASEFDLLRRMIR 327
PE + GY + D+WS G + EL G +P S FD L ++++
Sbjct: 194 PERIDPSASRQGYDVRS--DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 64
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 65 ---KEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 17/220 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G V K +AVK I+ +Q +L L+ D V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK----RLLMDLDISMRTVDCPFTVT 70
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
Y + + IC EL+D++L + K I+ + + I+ + I++ L L
Sbjct: 71 FYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS--RYYRSPEVL---LGY 288
+IH D+KP N+L+ ++K+ DFG + V I + + Y +PE + L
Sbjct: 131 VIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 289 Q-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMI 326
+ Y+ D+WS G + EL L P + F L++++
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK----- 171
+G G FG V K + N+ VAVK + A+V+++ L +++D+E K
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLA--------AMVDITT-EELKQQFDQEIKVMAKC 87
Query: 172 --HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRG---LSLSIVQLFSKQILRGL 226
++V + + LC+ + + N L +++ G LS + ++ G+
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYM-PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRS 281
+ L + IH D+K NILL + KI DFG A ++ + + SR Y +
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQTVMXSRIVGTTAYMA 203
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
PE L G + T D++SFG ++ E+ GLP E LL
Sbjct: 204 PEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 73
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 74 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + +S ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKH- 172
LGHG++G+V K E AVK + P + L EV +++ +H
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVG-------SHEKVGQHP 117
Query: 173 HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRGLSLLK 230
VR+ + + L + EL +L + + G SL Q++ + L L+ L
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLH 174
Query: 231 DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--YYRSPEVLLGY 288
G++H D+KP NI L K+ DFG +Q Y +PE+L G
Sbjct: 175 SQGLVHLDVKPANIFLGPR---GRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG- 230
Query: 289 QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337
Y TA D++S G + E+ + L G + LR+ G PP++
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ-----GYLPPEFT 274
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALT- 64
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
+ D HIV++ + + + I EL L +++ F L L+
Sbjct: 65 ----------MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF-SLDLAS 112
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ + +K+ DFG S ED T Y
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKA 169
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 78
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 79 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 135
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + + + + +
Sbjct: 136 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 73
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 74 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 182
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 68
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 69 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 68
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 69 ---KEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH D+ N+LL KI DFG A D
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 79
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 80 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 131
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 132 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAF 214
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 115 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 284 VLLGYQYT-----------TAIDMWSFGCIVAELFLG 309
+ + D+WS GCI+ + G
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 68
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 69 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G+FG+V + D + AVK ++ + + + LV + L++ IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSS----------PRIVP 114
Query: 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y + I ELL+ +L +LIK L + Q L GL L I+
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSA-CTE-DRTVYSYIQSRY------YRSPEVLLG 287
H D+K +N+LL S + + DFG A C + D S + Y + +PEV++G
Sbjct: 173 HGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 288 YQYTTAIDMWSFGCIVAELFLG 309
+D+WS C++ + G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 91
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 92 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 150
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 151 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMNSF--VAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ + L L+
Sbjct: 69 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 115
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 116 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 172
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 44/219 (20%)
Query: 115 DLLGHGTFGQVAKCWDAEMNSFVAVK-IIKNQPAYYQQALVEVSILTTLNKKYDREDKHH 173
++LG G FGQ K E + +K +I+ + L EV ++ L + +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-------EHPN 68
Query: 174 IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQL--------FSKQILRG 225
+++ + L + + E IK RG+ S+ F+K I G
Sbjct: 69 VLKFIGVLYKDKRL--------NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRT-------------- 269
++ L IIH DL N C + + + DFG A +++T
Sbjct: 121 MAYLHSMNIIHRDLNSHN---CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 270 -VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y+ + + Y+ +PE++ G Y +D++SFG ++ E+
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH D+ N+LL KI DFG A D
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMNSF--VAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT- 92
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
+ D HIV++ + + + I EL L +++ + L L+
Sbjct: 93 ----------MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 140
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 141 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 197
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT- 69
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
+ D HIV++ + + + I EL L +++ + L L+
Sbjct: 70 ----------MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 117
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 174
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRE 169
++ + +G G FG+V N+ VAVK + P + L E IL K+Y
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL----KQYSHP 172
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+ IVR+ ++ + I EL+ + ++ R +++Q+ G+
Sbjct: 173 N---IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA-AGMEY 228
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRSPE 283
L+ IH DL N C + +KI DFG + E VY+ + +PE
Sbjct: 229 LESKCCIHRDLAARN---CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 284 VLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS 317
L +Y++ D+WSFG ++ E F LG +P S
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 117 LGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDK 171
LG G FG V K + ++ VAVKI+KN+ PA + L E +++ L+ Y
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY----- 69
Query: 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLS 227
IVR+ +C+ +L + EL +N + R + + Q+ G+
Sbjct: 70 --IVRMIG--ICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTEDRTVY-SYIQSRY---YRS 281
L+++ +H DL N+LL T KI DFG A D Y + ++ + +
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + Y++++ D+WSFG ++ E F
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAF 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH D+ N+LL KI DFG A D
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+R + +PE + YT D+WS+G ++ E+F LGL +PG
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMNSF--VAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ + L L+
Sbjct: 68 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 114
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 171
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 68
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 69 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 127
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 128 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 43 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 90
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 91 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 149
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 150 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTG 232
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH DL NILL KI DFG A D
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
+R + +PE + YT D+WS+G + ELF LG +PG +MI+
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 67
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 68 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH DL NILL KI DFG A D
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
+R + +PE + YT D+WS+G + ELF LG +PG +MI+
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 68
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 69 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 42/233 (18%)
Query: 117 LGHGTFGQVAKCWDAEM-NSFVAVKI-IKNQPAYYQQA-----LVEVSILTTLNKKYDRE 169
LGHG FG+V + + M N +++ +K P Y + L+E I++ N +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ---- 108
Query: 170 DKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SKQIL 223
+IVR + I EL+ +L ++ R SL+++ L ++ I
Sbjct: 109 ---NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYYRS- 281
G L++ IH D+ N LL T P + KI DFG A R +Y ++ YYR
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYYRKG 217
Query: 282 -----------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 65
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 66 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 91
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 92 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 150
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 151 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 65
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 66 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 87
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 88 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 191
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 68
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 69 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 127
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 128 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH DL NILL KI DFG A D
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
+R + +PE + YT D+WS+G + ELF LG +PG +MI+
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 87
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 88 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 191
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G+FG+V + D + AVK ++ + + + LV + L++ IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSS----------PRIVP 130
Query: 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGII 235
+Y + I ELL+ +L +LIK L + Q L GL L I+
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 236 HCDLKPENILLCTSVKPAEIKIIDFGSA-CTE-DRTVYSYIQSRY------YRSPEVLLG 287
H D+K +N+LL S + + DFG A C + D S + Y + +PEV++G
Sbjct: 189 HGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 288 YQYTTAIDMWSFGCIVAELFLG 309
+D+WS C++ + G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 23/129 (17%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYS--- 272
QI + L G++H DLKP NI +K+ DFG E++TV +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 273 -------YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325
+ ++ Y SPE + G Y+ +D++S G I+ EL L+P +++ + +R +
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTL 237
Query: 326 IRILGAQPP 334
+ + P
Sbjct: 238 TDVRNLKFP 246
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH DL NILL KI DFG A D
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
+R + +PE + YT D+WS+G + ELF LG +PG +MI+
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ 275
FS Q+ +G++ L IH DL NILL KI DFG A D
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 276 SRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIR 327
+R + +PE + YT D+WS+G + ELF LG +PG +MI+
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 18 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 65
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 66 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 124
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 125 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTG 207
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 204 INHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263
++ LS V+ + + + L + GI+H D+KP N L +K + ++DFG A
Sbjct: 108 LDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLK--KYALVDFGLA 165
Query: 264 -CTEDRTV--YSYIQSRY----------------------------YRSPEVLLGY-QYT 291
T D + ++QS +R+PEVL T
Sbjct: 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 292 TAIDMWSFGCIVAELFLG-LPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKC 350
TAIDMWS G I L G P + + + L +++ I G++ ++ AK K C
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRE---TIQAAKTFGKSILC 282
Query: 351 IGSV 354
V
Sbjct: 283 SKEV 286
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ LN +
Sbjct: 39 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ- 94
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 95 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 149 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 200
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 81
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 82 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 185
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ + L L+
Sbjct: 66 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 112
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 169
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 74
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 75 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 178
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
++ ++G G FG+V + + VA+K +K Q+ L E SI+
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF----- 101
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D ++V + + + I E +++ + H +++QL + I G
Sbjct: 102 --DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH--DGQFTVIQLVGMLRGIAAG 157
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTED--RTVYSYIQSRY---Y 279
+ L D G +H DL NIL+ +++ K+ DFG S ED VY+ + +
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLV---CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+PE + ++T+A D+WS+G ++ E+
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 68 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 123
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 284 VLLGYQYT-----------TAIDMWSFGCIVAELFLG 309
+ + D+WS GCI+ + G
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 76
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 77 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGYQY 290
++H DLKP N+ L +K+ DFG A ++ ++ + YY SPE + Y
Sbjct: 137 VLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321
D+WS GC++ EL +P F S+ +L
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFV--AVKIIK----NQPAYYQQALVEVSILTTLNKKYDRE 169
LG G+FG V + WDA V AVK +K +QP + EV+ + +L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------- 68
Query: 170 DKHHIVRIYEYFVCQRHLCICFEL--LDSNLYELIKINHFRGLSLSIVQLFSKQILRGLS 227
D +++R+Y V + + EL L S L L K H L + ++ Q+ G+
Sbjct: 69 DHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMG 125
Query: 228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR------S 281
L+ IH DL N+LL T +KI DFG + + + + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE L ++ A D W FG + E+F
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ LN +
Sbjct: 53 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ- 108
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 109 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 214
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 78
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 79 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 182
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 43/224 (19%)
Query: 108 QRRYI--VKDLLGHGTFGQVAKC-WDAEMNSF---VAVKIIKNQPAYYQQALV--EVSIL 159
++R++ ++DL G G FG+V C +D E ++ VAVK +K + A + E+ IL
Sbjct: 19 EKRFLKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLC---------ICFELLDS-NLYELIKINHFRG 209
L +E V + +C + E L S +L E + N +
Sbjct: 78 RNL--------------YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK- 122
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTED 267
++L ++ QI +G+ L +H DL N+L+ + ++KI DFG A D
Sbjct: 123 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETD 179
Query: 268 RTVYSYIQSR----YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ + R ++ +PE L+ ++ A D+WSFG + EL
Sbjct: 180 KEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 113 VKDLLGHGTFGQVAKCW---DAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+++++G G FG+V + + S VA+K +K Q+ L E SI+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF----- 74
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGL 226
+ +I+R+ + I E +++ L +++N + + +V + + I G+
Sbjct: 75 --EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGM 131
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG---------SACTEDRTVYSYIQSR 277
L + +H DL NIL+ +++ K+ DFG S TE ++ I R
Sbjct: 132 RYLAEMSYVHRDLAARNILVNSNLV---CKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 278 YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ +PE + ++T+A D WS+G ++ E+
Sbjct: 189 WT-APEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 36 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 83
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 84 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 142
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 143 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTG 225
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK----- 171
+G G FG V K + N+ VAVK + A+V+++ L +++D+E K
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLA--------AMVDITT-EELKQQFDQEIKVMAKC 87
Query: 172 --HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRG---LSLSIVQLFSKQILRGL 226
++V + + LC+ + + N L +++ G LS + ++ G+
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYM-PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRS 281
+ L + IH D+K NILL + KI DFG A ++ + + R Y +
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQTVMXXRIVGTTAYMA 203
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
PE L G + T D++SFG ++ E+ GLP E LL
Sbjct: 204 PEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 80
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 81 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 184
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 77
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 78 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 181
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ + L L+
Sbjct: 63 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 109
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 110 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 166
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 32 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 82
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 142 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 199 SSKSDIWAFGVLMWEIY 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 63
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 64 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Query: 330 GAQPPDY 336
P+Y
Sbjct: 254 RLLQPEY 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQY 290
++H DLKP N+ L +K+ DFG A + +++ + YY SPE + Y
Sbjct: 137 VLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321
D+WS GC++ EL +P F S+ +L
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
D HIV++ + + + I EL L +++ + L L+
Sbjct: 66 RQF-----------DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKY-SLDLAS 112
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T Y
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKA 169
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 330 GAQPPDY 336
P+Y
Sbjct: 255 RLLQPEY 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 136 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Query: 330 GAQPPDY 336
P+Y
Sbjct: 253 RLLQPEY 259
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VAVK + + ++ L E S++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 78
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L +L +
Sbjct: 79 --HHVVRLLGVVSKGQPTLVVMELMAHGDLK----SYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C +KI DFG R +Y ++
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARN---CMVAHDFTVKIGDFGMT----RDIY---ET 182
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR +PE L +TT+ DMWSFG ++ E+
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 330 GAQPPDY 336
P+Y
Sbjct: 255 RLLQPEY 261
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRSPEVLLGYQY 290
++H DLKP N+ L +K+ DFG A + +++ + YY SPE + Y
Sbjct: 137 VLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 291 TTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321
D+WS GC++ EL +P F S+ +L
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 80
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 81 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 184
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 63
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 64 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 133 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249
Query: 330 GAQPPDY 336
P+Y
Sbjct: 250 RLLQPEY 256
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 29/223 (13%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 79
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + L I + + S+LY + + + ++ + ++Q RG+ L
Sbjct: 80 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHA 138
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 139 KSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326
Y+ D+++FG ++ EL G + + D + M+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 156 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 272
Query: 330 GAQPPDY 336
P+Y
Sbjct: 273 RLLQPEY 279
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 114 KDLLGHGTFGQVA--KCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK 171
KD+LGHG G + +D N VAVK I P + A EV +L RE
Sbjct: 29 KDVLGHGAEGTIVYRGMFD---NRDVAVKRI--LPECFSFADREVQLL--------RESD 75
Query: 172 HH--IVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
H ++R + ++ I EL + L E ++ F L L + L +Q GL+ L
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLL-QQTTSGLAHL 134
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIK--IIDFGSACTEDRTVYSYIQ------SRYYRS 281
I+H DLKP NIL+ +IK I DFG +S+ + + + +
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 282 PEVL---LGYQYTTAIDMWSFGCI 302
PE+L T +D++S GC+
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCV 218
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYR 280
+IL LS L G+++ DLKPENI+L ++K+ID G+ + Y Y + ++
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEE----QLKLIDLGAVSRINSFGYLY-GTPGFQ 244
Query: 281 SPEVLLGYQYTTAIDMWSFGCIVAELFLGLP 311
+PE++ T A D+++ G +A L L LP
Sbjct: 245 APEIVRTGP-TVATDIYTVGRTLAALTLDLP 274
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 32 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 82
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 142 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 199 SSKSDIWAFGVLMWEIY 215
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 114 KDLLGHGTFGQV----AKCWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V K + VA+K +K Q+ L E I+ +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH--- 105
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
H+I+R+ + + I E +++ L K + S++QL + I G
Sbjct: 106 ----HNIIRLEGVISKYKPMMIITEYMENG--ALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L + +H DL NIL+ +++ K+ DFG S ED +Y S +
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+PE + ++T+A D+WSFG ++ E+
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVM 244
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 130 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 246
Query: 330 GAQPPDY 336
P+Y
Sbjct: 247 RLLQPEY 253
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 143 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 259
Query: 330 GAQPPDY 336
P+Y
Sbjct: 260 RLLQPEY 266
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 74
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 75 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARN---CXVAEDFTVKIGDFGMT----RDIY---ET 178
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 157 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 273
Query: 330 GAQPPDY 336
P+Y
Sbjct: 274 RLLQPEY 280
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VA+K + + ++ L E S++ N
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC----- 109
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L SLS +
Sbjct: 110 --HHVVRLLGVVSQGQPTLVIMELMTRGDLK----SYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C + +KI DFG R +Y ++
Sbjct: 164 QMAGEIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT----RDIY---ET 213
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR SPE L +TT D+WSFG ++ E+
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-TEDRTVYSYIQS 276
F Q+ +G+ L +H DL N C + +K+ DFG A D+ YS
Sbjct: 135 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 277 RYYRSP------EVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ P E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 251
Query: 330 GAQPPDY 336
P+Y
Sbjct: 252 RLLQPEY 258
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V + + VA+K I+ + + E ++ L+ +V+
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHP-------KLVQ 67
Query: 177 IYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQL-FSKQILRGLSLLKDAGI 234
+Y + Q +C+ E ++ L + ++ RGL + L + G++ L++A +
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
IH DL N C + IK+ DFG + D S +++ + SPEV +Y
Sbjct: 126 IHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+WSFG ++ E+F
Sbjct: 183 SSKSDVWSFGVLMWEVF 199
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 330 GAQPPDY 336
P+Y
Sbjct: 256 RLLQPEY 262
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 60/237 (25%)
Query: 113 VKDLLGHGTFGQVAKC-----WDAEMNSFVAVKIIKNQPAYYQQALV--EVSILTTLNKK 165
V+D+ G G FG+V + E + VAVK++K + + QA E +++
Sbjct: 52 VRDI-GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF--- 107
Query: 166 YDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIK---------INH----FRG-- 209
D +IV++ + +C+ FE + +L E ++ ++H R
Sbjct: 108 ----DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 210 -------LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262
LS + ++Q+ G++ L + +H DL N L+ ++ +KI DFG
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMV---VKIADFGL 220
Query: 263 ACTEDRTVYSYIQSRYYRS------------PEVLLGYQYTTAIDMWSFGCIVAELF 307
+ R +YS + YY++ PE + +YTT D+W++G ++ E+F
Sbjct: 221 S----RNIYS---ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 330 GAQPPDY 336
P+Y
Sbjct: 255 RLLQPEY 261
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 330 GAQPPDY 336
P+Y
Sbjct: 256 RLLQPEY 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 43/224 (19%)
Query: 108 QRRYI--VKDLLGHGTFGQVAKC-WDAEMNSF---VAVKIIKNQPAYYQQALV--EVSIL 159
++R++ ++DL G G FG+V C +D E ++ VAVK +K + A + E+ IL
Sbjct: 7 EKRFLKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 65
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLC---------ICFELLDS-NLYELIKINHFRG 209
L +E V + +C + E L S +L E + N +
Sbjct: 66 RNL--------------YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK- 110
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG--SACTED 267
++L ++ QI +G+ L +H DL N+L+ + ++KI DFG A D
Sbjct: 111 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETD 167
Query: 268 RTVYSYIQSR----YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ + R ++ +PE L+ ++ A D+WSFG + EL
Sbjct: 168 KEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
Query: 330 GAQPPDY 336
P+Y
Sbjct: 314 RLLQPEY 320
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 136 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Query: 330 GAQPPDY 336
P+Y
Sbjct: 253 RLLQPEY 259
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
F Q+ +G+ L +H DL N C + +K+ DFG A + + ++
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 278 Y-------YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
+ + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 330 GAQPPDY 336
P+Y
Sbjct: 255 RLLQPEY 261
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 218 FSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC----TEDRTVYSY 273
F Q+ +G+ L +H DL N C + +K+ DFG A E +V++
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRIL 329
++ + + E L ++TT D+WSFG ++ EL G P +P + FD+ +++
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
Query: 330 GAQPPDY 336
P+Y
Sbjct: 254 RLLQPEY 260
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA-CTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG A ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 38/212 (17%)
Query: 113 VKDLLGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQA---LVEVSILTTLNKKYDR 168
+K+ +G G+FG V + W S VAVKI+ Q + ++ L EV+I+ L
Sbjct: 41 IKEKIGAGSFGTVHRAEWHG---SDVAVKILMEQDFHAERVNEFLREVAIMKRL------ 91
Query: 169 EDKHHIVRIYEYFVCQR-HLCICFELLDS-NLYELI-------KINHFRGLSLSIVQLFS 219
+H + ++ V Q +L I E L +LY L+ +++ R LS++
Sbjct: 92 --RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY----- 144
Query: 220 KQILRGLSLL--KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
+ +G++ L ++ I+H +LK N+L+ K +K+ DFG + + T S +
Sbjct: 145 -DVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 278 ---YYRSPEVLLGYQYTTAIDMWSFGCIVAEL 306
+ +PEVL D++SFG I+ EL
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VAVK + + ++ L E S++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L +L +
Sbjct: 80 --HHVVRLLGVVSKGQPTLVVMELMAHGDLK----SYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C +KI DFG R +Y ++
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARN---CMVAHDFTVKIGDFGMT----RDIY---ET 183
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR +PE L +TT+ DMWSFG ++ E+
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VAVK + + ++ L E S++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L +L +
Sbjct: 80 --HHVVRLLGVVSKGQPTLVVMELMAHGDLK----SYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H DL N C +KI DFG R +Y ++
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARN---CMVAHDFTVKIGDFGMT----RDIY---ET 183
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR +PE L +TT+ DMWSFG ++ E+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 110 RYIVKDLLGHGTFGQVAKCWDAEMN-------SFVAVKIIKNQPAY--YQQALVEVSILT 160
R ++ LG G FGQV ++ + VAVK++K+ + E+ ++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 161 TLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSI----- 214
+ K +I+ + L + E NL E ++ GL S
Sbjct: 89 MIGKH------KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 215 --VQLFSK-------QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC- 264
QL SK Q+ RG+ L IH DL N+L+ + +KI DFG A
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARD 199
Query: 265 -----TEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASE 318
+T + ++ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 200 IHHIDXXKKTTNGRLPVKWM-APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 319 FDLLRRM 325
+L + +
Sbjct: 259 EELFKLL 265
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 25/250 (10%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + VAVK +K ++ L E +++
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 82
Query: 165 KYDREDKH-HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQI 222
+E KH ++V++ + I E + NL + ++ + ++ ++ + QI
Sbjct: 83 ---KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY--- 278
+ L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 140 SSAMEYLEKKNFIHRDLAARN---CLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 279 YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI---LGA 331
+ +PE L ++ D+W+FG ++ E+ G+ +PG + +DLL + R+ G
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGC 256
Query: 332 QPPDYVLKEA 341
P Y L A
Sbjct: 257 PPKVYELMRA 266
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 41/220 (18%)
Query: 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKH 172
+ ++G G F +VA VK+ + Y + + + +L RE++
Sbjct: 65 ILKVIGRGAFSEVA-----------VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 173 HIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSK------------ 220
+V ++ Q H F D N L+ + G L+++ F +
Sbjct: 114 VLVNGDRRWITQLH----FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA 169
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT--EDRTVYSYIQ--S 276
+I+ + + G +H D+KP+NILL + I++ DFGS D TV S + +
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 277 RYYRSPEVLLGYQYTTA-------IDMWSFGCIVAELFLG 309
Y SPE+L D W+ G E+F G
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 87 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 142
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 284 VL-----------LGYQYTTAIDMWSFGCIVAELFLG 309
+ + + D+WS GCI+ + G
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAK-CWDAEMN--SFVAVKIIKN------QPAYYQQALVE 155
E QR I + +G G FG V + + + N VA+K KN + + Q+AL
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALT- 64
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSI 214
+ D HIV++ + + + I EL L +++ F L L+
Sbjct: 65 ----------MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF-SLDLAS 112
Query: 215 VQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSY 273
+ L++ Q+ L+ L+ +H D+ N+L+ ++ +K+ DFG S ED T
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTXXKA 169
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325
+ + + +PE + ++T+A D+W FG + E+ + G+ F G D++ R+
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKH 172
+G G+FG V K W + VAVK++ P Q EV +L R+ +H
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVL--------RKTRH 63
Query: 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD 231
+ ++ + L I + + S+LY + I + + ++ + ++Q +G+ L
Sbjct: 64 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHA 122
Query: 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSY-----IQSRYYRSPEVLL 286
IIH DLK NI L + +KI DFG A + R S+ S + +PEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GYQ---YTTAIDMWSFGCIVAELFLG 309
Y+ D+++FG ++ EL G
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 101
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 102 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 157
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 215 TSPEAIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 12 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 70
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 71 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHT 126
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 284 VL-----------LGYQYTTAIDMWSFGCIVAELFLG 309
+ + + D+WS GCI+ + G
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 219
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDK----- 171
+G G FG V K + N+ VAVK + A+V+++ L +++D+E K
Sbjct: 33 MGEGGFGVVYKGYVN--NTTVAVKKLA--------AMVDITT-EELKQQFDQEIKVMAKC 81
Query: 172 --HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRG---LSLSIVQLFSKQILRGL 226
++V + + LC+ + + N L +++ G LS + ++ G+
Sbjct: 82 QHENLVELLGFSSDGDDLCLVYVYM-PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRS 281
+ L + IH D+K NILL + KI DFG A ++ + R Y +
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVMXXRIVGTTAYMA 197
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
PE L G + T D++SFG ++ E+ GLP E LL
Sbjct: 198 PEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VAVK+IK + E + L+ H
Sbjct: 16 LGSGQFGVVKLGKWKGQYD--VAVKMIKEGSMSEDEFFQEAQTMMKLS---------HPK 64
Query: 176 RIYEYFVCQRH--LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG 233
+ Y VC + + I E + + +H +GL S + + G++ L+
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQ 289
IH DL N C + +K+ DFG + D S + +++ + +PEV ++
Sbjct: 125 FIHRDLAARN---CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK 181
Query: 290 YTTAIDMWSFGCIVAELF 307
Y++ D+W+FG ++ E+F
Sbjct: 182 YSSKSDVWAFGILMWEVF 199
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 39 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 94
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 95 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 149 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 200
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 257
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-----EDRTVYS--- 272
QI + L G++H DLKP NI +K+ DFG E++TV +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 273 -------YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ ++ Y SPE + G Y+ +D++S G I+ EL
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 254
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 91
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 92 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 147
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 53 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 108
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 109 ------NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 214
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY--SYIQSRY 278
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y + R
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 279 ---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 65
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 66 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T + +++
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 258
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDR 168
R Y + +G G +V + + E A+K + + A Q + + LNK
Sbjct: 8 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 66
Query: 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
DK I+R+Y+Y + +++ + E + +L +K + + + + K +L +
Sbjct: 67 SDK--IIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 122
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC-----TEDRTVYSYIQSRYYRSPE 283
+ GI+H DLKP N L+ + +K+IDFG A T S + + Y PE
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 284 VL-----------LGYQYTTAIDMWSFGCIVAELFLG 309
+ + + D+WS GCI+ + G
Sbjct: 179 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTED 267
L+ + F+ Q+ +G+ L+ +H DL N+L+ +KI DFG A D
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSD 225
Query: 268 RTVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+R + +PE L YT D+WS+G ++ E+F LG+ +PG
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 65 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 120
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 121 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 175 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 226
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 23 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 73
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 132
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 133 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 190 SSKSDIWAFGVLMWEIY 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 56 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 111
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 112 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 166 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RAGYY 217
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 45 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 100
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 101 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 155 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 206
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 225 GLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----Y 279
G++ L + IH D+K NILL + KI DFG A ++ SR Y
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322
+PE L G + T D++SFG ++ E+ GLP E LL
Sbjct: 193 XAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 75 --DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 130
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS-----RYY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 64
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 65 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T + +++
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 38 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 93
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 94 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 148 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 199
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 30 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 85
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 86 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 140 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 191
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQ---ALV--EVSIL 159
I+K ++G G FG+VA A+KI+ + + A +++ LV + +
Sbjct: 94 IIK-VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWI 152
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS 219
T L+ Y +D++H+ + +Y+V L + + D L + + +
Sbjct: 153 TALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-------------LPEDMARFYI 197
Query: 220 KQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQ-- 275
+++ + + +H D+KP+N+LL + I++ DFGS +D TV S +
Sbjct: 198 GEMVLAIDSIHQLHYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGTVQSSVAVG 254
Query: 276 SRYYRSPEVLLGYQ-----YTTAIDMWSFGCIVAELFLG 309
+ Y SPE+L + Y D WS G + E+ G
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 44/215 (20%)
Query: 113 VKDLLGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQA---LVEVSILTTLNKKYDR 168
+K+ +G G+FG V + W S VAVKI+ Q + ++ L EV+I+ L
Sbjct: 41 IKEKIGAGSFGTVHRAEWHG---SDVAVKILMEQDFHAERVNEFLREVAIMKRL------ 91
Query: 169 EDKHHIVRIYEYFVCQR-HLCICFELLDS-NLYELI-------KINHFRGLSLSIVQLFS 219
+H + ++ V Q +L I E L +LY L+ +++ R LS++
Sbjct: 92 --RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY----- 144
Query: 220 KQILRGLSLL--KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR 277
+ +G++ L ++ I+H DLK N+L+ K +K+ DFG + + ++ S+
Sbjct: 145 -DVAKGMNYLHNRNPPIVHRDLKSPNLLVD---KKYTVKVCDFGLSRLK---ASXFLXSK 197
Query: 278 Y------YRSPEVLLGYQYTTAIDMWSFGCIVAEL 306
+ +PEVL D++SFG I+ EL
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 20/224 (8%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V D N VAVK IKN A Q L E S++T L ++V+
Sbjct: 201 IGKGEFGDVM-LGDYRGNK-VAVKCIKND-ATAQAFLAEASVMTQLRHS-------NLVQ 250
Query: 177 IYEYFVCQRH-LCICFELLDSNLYELIKINHFRGLSL---SIVQLFSKQILRGLSLLKDA 232
+ V ++ L I E + L+ RG S+ + FS + + L+
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
+H DL N+L+ + K+ DFG T + + +PE L +++T
Sbjct: 309 NFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 293 AIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRMIRILGAQPPD 335
D+WSFG ++ E++ G +P D++ R+ + PD
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 199
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLR 323
+ +PE L YT D+WSFG ++ E+F LG +PG +L +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 55 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 110
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 111 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 165 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 216
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 211 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V D N VAVK IKN A Q L E S++T L ++V+
Sbjct: 29 IGKGEFGDVM-LGDYRGNK-VAVKCIKND-ATAQAFLAEASVMTQLRHS-------NLVQ 78
Query: 177 IYEYFVCQRH-LCICFELLDSNLYELIKINHFRGLSL---SIVQLFSKQILRGLSLLKDA 232
+ V ++ L I E + L+ RG S+ + FS + + L+
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
+H DL N+L+ + K+ DFG T + + +PE L +++T
Sbjct: 137 NFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 293 AIDMWSFGCIVAELF 307
D+WSFG ++ E++
Sbjct: 194 KSDVWSFGILLWEIY 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 38 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 93
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 94 ------NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 148 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RASYY 199
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 75 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 130
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQS-----RYY 279
+ L D G +H DL NIL+ +++ K+ DFG S ED +Y +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDR 268
L + + L+S QI + ++ L+ +H D+ NIL+ + P +K+ DFG S ED
Sbjct: 122 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PECVKLGDFGLSRYIEDE 178
Query: 269 TVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y +R + SPE + ++TTA D+W F + E+
Sbjct: 179 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 106 ETQRRYI-VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164
E +R I +K LG G +G+V + + + VAVK +K ++ L E +++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM----- 63
Query: 165 KYDREDKH-HIVRIYEYFVCQRH--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSK 220
+E KH ++V++ VC R I E + NL + ++ + + ++ ++ +
Sbjct: 64 ---KEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY- 278
QI + L+ IH DL N C + +K+ DFG S T ++ +++
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 279 --YRSPEVLLGYQYTTAIDMWSFGCIVAEL-FLGLPLFPG---ASEFDLLRRMIRI 328
+ +PE L +++ D+W+FG ++ E+ G+ +PG + ++LL + R+
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 209 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 259
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 117 LGHGTFGQVAKCWDAEMNSF--------VAVKIIKNQPAYYQQA--LVEVSILTTLNKKY 166
LGHG FG+V ++ +++ VAVK + + + L+E I++ N +
Sbjct: 79 LGHGAFGEV---YEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ- 134
Query: 167 DREDKHHIVRIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGL---SLSIVQLF--SK 220
+IVR + I EL+ +L ++ R SL+++ L ++
Sbjct: 135 ------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI-KIIDFGSACTEDRTVYSYIQSRYY 279
I G L++ IH D+ N LL T P + KI DFG A R +Y ++ YY
Sbjct: 189 DIACGCQYLEENHFIHRDIAARNCLL-TCPGPGRVAKIGDFGMA----RDIY---RAGYY 240
Query: 280 RS------------PEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLL 322
R PE + +T+ D WSFG ++ E+F LG +P S ++L
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A + Y +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 214 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 110 RYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTL 162
R ++ ++G G G+V C+ + + VA+K +K Q+ L E SI+
Sbjct: 50 RIHIEKIIGSGDSGEV--CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--K 220
D +I+R+ R I E +++ + H +I+QL +
Sbjct: 108 -------DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLR 158
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-- 277
+ G+ L D G +H DL N+L+ +++ K+ DFG S ED +Y +
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLV---CKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 278 ---YYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
+ +PE + +++A D+WSFG ++ E+
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQ---ALV--EVSIL 159
I+K ++G G FG+VA A+KI+ + + A +++ LV + +
Sbjct: 78 IIK-VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWI 136
Query: 160 TTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS 219
T L+ Y +D++H+ + +Y+V L + + D L + + +
Sbjct: 137 TALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-------------LPEDMARFYI 181
Query: 220 KQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC--TEDRTVYSYIQ-- 275
+++ + + +H D+KP+N+LL + I++ DFGS +D TV S +
Sbjct: 182 GEMVLAIDSIHQLHYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGTVQSSVAVG 238
Query: 276 SRYYRSPEVLLGYQ-----YTTAIDMWSFGCIVAELFLG 309
+ Y SPE+L + Y D WS G + E+ G
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + +KI DFG A Y +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGASEFDLLRRM 325
+ +PE L YT D+WSFG ++ E+F LG +PG +L + +
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDR 268
L + + L+S QI + ++ L+ +H D+ NIL+ + P +K+ DFG S ED
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PECVKLGDFGLSRYIEDE 166
Query: 269 TVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y +R + SPE + ++TTA D+W F + E+
Sbjct: 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 16 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 66
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 125
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 126 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 183 SSKSDIWAFGVLMWEIY 199
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+ ++G G FG+V ++ VA+K +K Q+ L E SI+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFS--KQILRG 225
D +I+R+ + + I E +++ + H +++QL + I G
Sbjct: 104 --DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASG 159
Query: 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSR-----YY 279
+ L D G +H DL NIL+ +++ K+ DFG ED +Y +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW 216
Query: 280 RSPEVLLGYQYTTAIDMWSFGCIVAELF 307
SPE + ++T+A D+WS+G ++ E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 113 VKDLLGHGTFGQVAKCW---DAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
+++++G G FG+V + + S VA+K +K Q+ L E SI+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF----- 72
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGL 226
+ +I+R+ + I E +++ L +++N + + +V + + I G+
Sbjct: 73 --EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGM 129
Query: 227 SLLKDAGIIHCDLKPENILLCTSV--KPAEIKIIDFGSACTEDRTVYSYIQSRY---YRS 281
L + +H DL NIL+ +++ K ++ + F + D T S + + + +
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + ++T+A D WS+G ++ E+
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 210 LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDR 268
L + + L+S QI + ++ L+ +H D+ NIL+ + P +K+ DFG S ED
Sbjct: 106 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PECVKLGDFGLSRYIEDE 162
Query: 269 TVYSYIQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAELF 307
Y +R + SPE + ++TTA D+W F + E+
Sbjct: 163 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 204
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 222 ILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT------EDRTVYSYIQ 275
I RGL + G H DLKP NILL +P + + AC + T+ +
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 276 SRY---YRSPEVLLGYQYTTAI----DMWSFGCIVAELFLG 309
R YR+PE L Q I D+WS GC++ + G
Sbjct: 203 QRCTISYRAPE-LFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 17/221 (7%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
LG G +G V K AVK I+ +Q +L L+ D V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQK----RLLXDLDISXRTVDCPFTVT 97
Query: 177 IYEYFVCQRHLCICFELLDSNLYELIK--INHFRGLSLSIVQLFSKQILRGLSLL-KDAG 233
Y + + IC EL D++L + K I+ + + I+ + I++ L L
Sbjct: 98 FYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 234 IIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS--RYYRSPEVL---LGY 288
+IH D+KP N+L+ ++K DFG + V I + + Y +PE + L
Sbjct: 158 VIHRDVKPSNVLINAL---GQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 289 Q-YTTAIDMWSFGCIVAEL-FLGLPLFPGASEFDLLRRMIR 327
+ Y+ D+WS G EL L P + F L++++
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRE 169
++ + +G G FG+V N+ VAVK + P + L E IL K+Y
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL----KQYSHP 172
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228
+ IVR+ ++ + I EL+ + ++ R +++Q+ G+
Sbjct: 173 N---IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA-AGMEY 228
Query: 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY-----YRSPE 283
L+ IH DL N C + +KI DFG + E V + + +PE
Sbjct: 229 LESKCCIHRDLAARN---CLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 284 VLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS 317
L +Y++ D+WSFG ++ E F LG +P S
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 17 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 67
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 126
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 127 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 184 SSKSDIWAFGVLMWEIY 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 116 LLGHGTFGQVAK-CWDAEMNSF---VAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRE 169
+LG G FG V K W E VA+K ++ P ++ L E ++ ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------- 76
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
D H+ R+ + I + L + ++ H + + + QI +G++ L
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CTEDRTVYSYIQSR--YYRSPEV 284
+D ++H DL N+L+ T P +KI DFG A E++ ++ + + E
Sbjct: 136 EDRRLVHRDLAARNVLVKT---PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 285 LLGYQYTTAIDMWSFGCIVAELF 307
+L YT D+WS+G V EL
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VAVK + + ++ L E S++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 80
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L +L +
Sbjct: 81 --HHVVRLLGVVSKGQPTLVVMELMAHGDLK----SYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H +L N C +KI DFG R +Y ++
Sbjct: 135 QMAAEIADGMAYLNAKKFVHRNLAARN---CMVAHDFTVKIGDFGMT----RDIY---ET 184
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR +PE L +TT+ DMWSFG ++ E+
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V D N VAVK IKN A Q L E S++T L ++V+
Sbjct: 20 IGKGEFGDVM-LGDYRGNK-VAVKCIKND-ATAQAFLAEASVMTQLRHS-------NLVQ 69
Query: 177 IYEYFVCQRH-LCICFELLDSNLYELIKINHFRGLSL---SIVQLFSKQILRGLSLLKDA 232
+ V ++ L I E + L+ RG S+ + FS + + L+
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
+H DL N+L+ + K+ DFG T + + +PE L ++T
Sbjct: 128 NFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 293 AIDMWSFGCIVAELF 307
D+WSFG ++ E++
Sbjct: 185 KSDVWSFGILLWEIY 199
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSR--- 277
Q+ RG+ L IH DL N+L+ + ++I DFG A + Y +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 278 --YYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
+ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 106 ETQRRYIVKDLLGHGTFGQVAK-CWDAEMNSF---VAVKII------KNQPAYYQQALVE 155
ET+ + + +LG G FG V K W E + VA+KI+ K + +AL+
Sbjct: 37 ETELKRV--KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 156 VSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIV 215
S+ D H+VR+ + + + L E + H + ++
Sbjct: 95 ASM-----------DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLL 142
Query: 216 QLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSY 273
+ QI +G+ L++ ++H DL N+L+ + P +KI DFG A D Y+
Sbjct: 143 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS---PNHVKITDFGLARLLEGDEKEYNA 199
Query: 274 IQSRY---YRSPEVLLGYQYTTAIDMWSFGCIVAEL--FLGLPL--FPGASEFDLLRRMI 326
+ + + E + ++T D+WS+G + EL F G P P DLL +
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE 259
Query: 327 RILGAQPP 334
R+ QPP
Sbjct: 260 RL--PQPP 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 117 LGHGTFGQVAKC-WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIV 175
LG G FG V W + + VA+K+IK + + E ++ L+ + +V
Sbjct: 12 LGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHE-------KLV 62
Query: 176 RIYEYFVCQRHLCICFELL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI 234
++Y QR + I E + + L ++ R + ++++ K + + L+
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 121
Query: 235 IHCDLKPENILLCTSVKPAEIKIIDFG-SACTEDRTVYSYIQSRY---YRSPEVLLGYQY 290
+H DL N C +K+ DFG S D S + S++ + PEVL+ ++
Sbjct: 122 LHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 291 TTAIDMWSFGCIVAELF 307
++ D+W+FG ++ E++
Sbjct: 179 SSKSDIWAFGVLMWEIY 195
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 184 QRHLCICFELLDSNLYELIKINHFRG-LSLSIVQLFSKQILRGLSLLKDAG--IIHCDLK 240
Q + EL L E +K RG LS V Q R + + IIH DLK
Sbjct: 106 QAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK 165
Query: 241 PENILLCTSVKPAEIKIIDFGSACT-----------EDRTVYSYIQSR----YYRSPEVL 285
EN+LL IK+ DFGSA T + R + +R YR+PE++
Sbjct: 166 VENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222
Query: 286 LGYQ---YTTAIDMWSFGCIV 303
Y D+W+ GCI+
Sbjct: 223 DLYSNFPIGEKQDIWALGCIL 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 53/222 (23%)
Query: 117 LGHGTFGQVAK-----CWDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYDRE 169
LG G+FG V + E + VAVK + + ++ L E S++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGL-------------SLSIVQ 216
HH+VR+ + + EL+ + ++ R L +L +
Sbjct: 80 --HHVVRLLGVVSKGQPTLVVMELMAHGDLK----SYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 217 LFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS 276
+ +I G++ L +H +L N C +KI DFG R +Y ++
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRNLAARN---CMVAHDFTVKIGDFGMT----RDIY---ET 183
Query: 277 RYYR------------SPEVLLGYQYTTAIDMWSFGCIVAEL 306
YYR +PE L +TT+ DMWSFG ++ E+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 116 LLGHGTFGQVAK-CWDAEMNSF---VAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRE 169
+LG G FG V K W E VA+K ++ P ++ L E ++ ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------- 81
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
D H+ R+ + I + L + ++ H + + + QI +G++ L
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS-----RYYRSPEV 284
+D ++H DL N+L+ T P +KI DFG A Y + + E
Sbjct: 141 EDRRLVHRDLAARNVLVKT---PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 285 LLGYQYTTAIDMWSFGCIVAELF 307
+L YT D+WS+G V EL
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 116 LLGHGTFGQVAK-CWDAEMNSF---VAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRE 169
+LG G FG V K W E VA+K ++ P ++ L E ++ ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------- 76
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
D H+ R+ + I + L + ++ H + + + QI +G++ L
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA---CTEDRTVYSYIQSR--YYRSPEV 284
+D ++H DL N+L+ T P +KI DFG A E++ ++ + + E
Sbjct: 136 EDRRLVHRDLAARNVLVKT---PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 285 LLGYQYTTAIDMWSFGCIVAELF 307
+L YT D+WS+G V EL
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA------CTEDRTVYSYI 274
Q+ RG+ L IH DL N+L+ + +KI DFG A +T +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
++ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWM-APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 221 QILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC------TEDRTVYSYI 274
Q+ RG+ L IH DL N+L+ + +KI DFG A +T +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 275 QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF-LGLPLFPG 315
++ +PE L YT D+WSFG ++ E+F LG +PG
Sbjct: 222 PVKWM-APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 116 LLGHGTFGQVAK-CWDAEMNSF---VAVKIIK--NQPAYYQQALVEVSILTTLNKKYDRE 169
+LG G FG V K W E VA+K ++ P ++ L E ++ ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------- 76
Query: 170 DKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLL 229
D H+ R+ + I + L + ++ H + + + QI +G++ L
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQS-----RYYRSPEV 284
+D ++H DL N+L+ T P +KI DFG A Y + + E
Sbjct: 136 EDRRLVHRDLAARNVLVKT---PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 285 LLGYQYTTAIDMWSFGCIVAELF 307
+L YT D+WS+G V EL
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 116 LLGHGTFGQVAKCWDAEMNSFVAVKII-------KNQPAYYQQ---ALV--EVSILTTLN 163
++G G FG+VA + A+KI+ + + A +++ LV + +TTL+
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQIL 223
Y +D +++ + +Y+V L + + D L + + + +++
Sbjct: 141 --YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-------------LPEEMARFYLAEMV 185
Query: 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA--CTEDRTVYSYIQ--SRYY 279
+ + +H D+KP+NIL+ + I++ DFGS ED TV S + + Y
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
Query: 280 RSPEVLLGYQ-----YTTAIDMWSFGCIVAELFLG 309
SPE+L + Y D WS G + E+ G
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR 176
+G G FG V D N VAVK IKN A Q L E S++T L ++V+
Sbjct: 14 IGKGEFGDVM-LGDYRGNK-VAVKCIKND-ATAQAFLAEASVMTQLRHS-------NLVQ 63
Query: 177 IYEYFVCQRH-LCICFELLDSNLYELIKINHFRGLSL---SIVQLFSKQILRGLSLLKDA 232
+ V ++ L I E + L+ RG S+ + FS + + L+
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTT 292
+H DL N+L+ + K+ DFG T + + +PE L +++T
Sbjct: 122 NFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 293 AIDMWSFGCIVAELF 307
D+WSFG ++ E++
Sbjct: 179 KSDVWSFGILLWEIY 193
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 113 VKDLLGHGTFGQVAKC---WDAEMNSFVAVKIIKNQPAYYQQA--LVEVSILTTLNKKYD 167
++ ++G G FG+V + FVA+K +K+ Q+ L E SI+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF----- 91
Query: 168 REDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGL 226
D +++ + + I E +++ +L ++ N + + +V + + I G+
Sbjct: 92 --DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAAGM 148
Query: 227 SLLKDAGIIHCDLKPENILLCTSV--KPAEIKIIDFGSACTEDRTVYSYIQSRY---YRS 281
L D +H DL NIL+ +++ K ++ + F T D T S + + + +
Sbjct: 149 KYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 282 PEVLLGYQYTTAIDMWSFGCIVAELF 307
PE + ++T+A D+WS+G ++ E+
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVM 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,534,482
Number of Sequences: 62578
Number of extensions: 1083906
Number of successful extensions: 5454
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 2710
Number of HSP's gapped (non-prelim): 1440
length of query: 820
length of database: 14,973,337
effective HSP length: 107
effective length of query: 713
effective length of database: 8,277,491
effective search space: 5901851083
effective search space used: 5901851083
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)